Citrus Sinensis ID: 017793

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
Protein Sequence
MAEAIRDDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEEEcccEEEEEEcccccccccEEEEEEEEEEEcccccccccccccccccccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccEEEEccccccccccEEEEccccEEEcccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHccccEEEEEEEccccHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccEEEcHHEEEEccccccEEEEEEEccccccccEEEEEEEEEEEcccEEEEccccccccEccccEccccEEcccEEEEEEEEEcccccccccccEEEEccEEcccccHHHHcccHHHccccEEccEccEccccEcEEEEEHHHEEEccccccHHHHHcHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccEEEEcccccccccccHHHHHccccEEEEcccccccHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHHHcccccEEEEEEc
Coil and Loop (DISEMBL)
maeairddegdkNQNMAAWLLGIktlkiqpyhlptlgpqDVKVRIKALGicgsdvhhfkvkklstmrcanfivkkpmvigHECAGIIEEVgsevkslevgdrvalepgiscghcslckagsynlcpemrffgspptngslahkvvhpaklcyklpdnvsleegamceplsvgvhacrranvgpetnvmimgsGPIGLVTLLAARafgapriiitdvDVQRLSIARNlgadetakvstdiedvdtDVGKIQNamgsgidvsfdcvgfdktmstalnatrpggkvCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRsgkidvkplithrfgftqKEIEDAFEISAQGGNAIKVMFNL
Flexible Loop (DISEMBL)
maeairddegdknqNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSdvhhfkvkklstMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIArnlgadetakvstdiedvDTDVGKIQNAMGSGIDVSFDCVGFDKTMStalnatrpggKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRsgkidvkpLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Low Complexity Region (SEG)
MAEAIRDDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Disordered region (IsUnstruct)
***************MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV****
Disordered Region (DISOPRED)
******************WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Disordered Region (DISEMBL)
***********KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Disordered Region (DISPRO)
*******DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEAIRDDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	366	2.2.26 [Sep-21-2011]
Q1PSI9	366	L-idonate 5-dehydrogenase	yes	no	0.950	0.950	0.810	1e-174
Q4R639	357	Sorbitol dehydrogenase OS	N/A	no	0.939	0.963	0.440	6e-82
Q00796	357	Sorbitol dehydrogenase OS	yes	no	0.937	0.960	0.447	1e-81
Q58D31	356	Sorbitol dehydrogenase OS	yes	no	0.937	0.963	0.441	9e-81
Q5R5F3	357	Sorbitol dehydrogenase OS	yes	no	0.937	0.960	0.447	3e-80
P07846	354	Sorbitol dehydrogenase OS	N/A	no	0.928	0.960	0.438	3e-80
Q64442	357	Sorbitol dehydrogenase OS	yes	no	0.939	0.963	0.426	2e-79
P27867	357	Sorbitol dehydrogenase OS	yes	no	0.937	0.960	0.422	2e-79
A1CFY8	358	Probable D-xylulose reduc	N/A	no	0.926	0.946	0.414	8e-71
Q5ARL6	359	Probable D-xylulose reduc	yes	no	0.934	0.952	0.409	2e-70

>sp|Q1PSI9|IDND_VITVI L-idonate 5-dehydrogenase OS=Vitis vinifera GN=VIT_16s0100g00290 PE=1 SV=2

 Score =  610 bits (1573), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 286/353 (81%), Positives = 326/353 (92%), Gaps = 5/353 (1%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIV 73
           +NMAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFK     TMRCANFIV
Sbjct: 19  ENMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFK-----TMRCANFIV 73

Query: 74  KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 133
           KKPMVIGHECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FFGS
Sbjct: 74  KKPMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGS 133

Query: 134 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSG 193
           PPTNGSLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSG
Sbjct: 134 PPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSG 193

Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
           PIGLVT+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M
Sbjct: 194 PIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTM 253

Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 313
            +G+DVSFDCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRY
Sbjct: 254 VTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRY 313

Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           R+TWPLC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 314 RNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366

Involved in the catabolism of ascorbate to tartrate. The enzyme has no activity with NADP(+).
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 8

>sp|Q4R639|DHSO_MACFA Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3

 Score =  304 bits (779), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 156/354 (44%), Positives = 230/354 (64%), Gaps = 10/354 (2%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K +N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++       R  NF
Sbjct: 6   KPKNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWE-----EGRIGNF 60

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG+   +   CK+G YNL P + F 
Sbjct: 61  IVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFC 120

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G
Sbjct: 121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCG 180

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIG+V+LL A+A GA ++++TD+   RLS A+ +GAD   ++S   E      GK++ 
Sbjct: 181 AGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISK--ESPQEIAGKVEG 238

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            +G   +V+ +C G + ++   + ATR GG + L+GL     T+ L  AA REVD+ G+F
Sbjct: 239 LLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVF 298

Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
           RY +TWP+ I  L S  +++KPL+THRF   +K +E AFE + + G  +K+M  
Sbjct: 299 RYCNTWPVAISMLASKSVNIKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4

 Score =  303 bits (777), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 158/353 (44%), Positives = 226/353 (64%), Gaps = 10/353 (2%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++       R  NF
Sbjct: 6   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYG-----RIGNF 60

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F 
Sbjct: 61  IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 120

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G
Sbjct: 121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 180

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIG+VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct: 181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 238

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            +G   +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+F
Sbjct: 239 QLGCKPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVF 298

Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
           RY +TWP+ I  L S  ++VKPL+THRF   +K +E AFE + + G  +K+M 
Sbjct: 299 RYCNTWPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIML 348

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q58D31|DHSO_BOVIN Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3

 Score =  300 bits (769), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 156/353 (44%), Positives = 227/353 (64%), Gaps = 10/353 (2%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++       R  +F
Sbjct: 5   KPENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQ-----HGRIGDF 59

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           +VKKPMV+GHE +G + +VGS V+ L+ GDRVA+EPG        CK G YNL P + F 
Sbjct: 60  VVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFC 119

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G
Sbjct: 120 ATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCG 179

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIGLV+LLAA+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct: 180 AGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISN--ESPQEIAKKVEG 237

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            +GS  +V+ +C G + ++   + AT  GG + L+GL     +V L  AA REVD+ G+F
Sbjct: 238 LLGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVF 297

Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
           RY +TWP+ I  L S  ++VKPL+THRF   +K +E AFE S + G  +KVM 
Sbjct: 298 RYCNTWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKK-GLGLKVMI 347

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5R5F3|DHSO_PONAB Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1

 Score =  298 bits (764), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 158/353 (44%), Positives = 224/353 (63%), Gaps = 10/353 (2%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++       R  NF
Sbjct: 6   KPSNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWE-----DGRIGNF 60

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F 
Sbjct: 61  IVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFC 120

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPDNV+ EEGAM EPLSVG+HACRR  V     V++ G
Sbjct: 121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCG 180

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIG+VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct: 181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 238

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            +G   +V+ +C G   ++   + AT  GG + L+GL     T+ L  AA REVD+ G+F
Sbjct: 239 LLGCKPEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVF 298

Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
           RY +TWP+ I  L S  ++VKPLITHRF   +K +E AFE + + G  +K+M 
Sbjct: 299 RYCNTWPVAISMLASKSVNVKPLITHRFPL-EKALE-AFE-TFKKGLGLKIML 348

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P07846|DHSO_SHEEP Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1

 Score =  298 bits (764), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 154/351 (43%), Positives = 226/351 (64%), Gaps = 11/351 (3%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIV 73
           +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++       R  +F+V
Sbjct: 6   ENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQ------GRIGDFVV 59

Query: 74  KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 133
           KKPMV+GHE +G + +VGS V+ L+ GDRVA++PG        CK G YNL P + F  +
Sbjct: 60  KKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCAT 119

Query: 134 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSG 193
           PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G+G
Sbjct: 120 PPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAG 179

Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
           PIGLV LLAA+A GA ++++TD+   RLS A+ +GAD   ++S   E  +    K++  +
Sbjct: 180 PIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISN--ESPEEIAKKVEGLL 237

Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 313
           GS  +V+ +C G + ++   + AT  GG + L+GL     +V L  AA REVD+ G+FRY
Sbjct: 238 GSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRY 297

Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
            +TWP+ I  L S  ++VKPL+THRF   +K +E AFE S + G  +KVM 
Sbjct: 298 CNTWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKK-GLGLKVMI 345

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q64442|DHSO_MOUSE Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3

 Score =  296 bits (758), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/354 (42%), Positives = 230/354 (64%), Gaps = 10/354 (2%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K +N++  + G   ++++ Y +P LGP DV +++ ++GICGSDVH+++       R  +F
Sbjct: 6   KGENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWE-----HGRIGDF 60

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           +VKKPMV+GHE AG + +VG  VK L+ GDRVA+EPG+       CK G YNL P + F 
Sbjct: 61  VVKKPMVLGHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFC 120

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPD+V+ EEGA+ EPLSVG++ACRR +V     V++ G
Sbjct: 121 ATPPDDGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCG 180

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GP+G+VTLL A+A GA ++++TD+   RL+ A+ +GAD T +V    E       K+++
Sbjct: 181 AGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGK--ETPQEIASKVES 238

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            +GS  +V+ +C G + ++ T + AT  GG + ++G+    + + L  AA REVD+ G+F
Sbjct: 239 LLGSKPEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVF 298

Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
           RY +TWP+ I  L S  ++VKPL+THRF   +K +E AFE +A+ G  +KVM  
Sbjct: 299 RYCNTWPMAISMLASKTLNVKPLVTHRFPL-EKAVE-AFE-TAKKGVGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27867|DHSO_RAT Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4

 Score =  296 bits (757), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 150/355 (42%), Positives = 233/355 (65%), Gaps = 12/355 (3%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K +N++  + G   ++++ Y +P LGP DV +++ ++GICGSDVH+++       R  +F
Sbjct: 6   KGENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWE-----HGRIGDF 60

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           +VKKPMV+GHE AG + +VG  VK L+ GDRVA+EPG+       CK G YNL P + F 
Sbjct: 61  VVKKPMVLGHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFC 120

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPD+V+ EEGA+ EPLSVG++ACRR +V     V++ G
Sbjct: 121 ATPPDDGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCG 180

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG-KIQ 250
           +GPIG+VTLL A+A GA ++++ D+   RL+ A+ +GAD T +V+   ++   D+  K++
Sbjct: 181 AGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVA---KETPHDIAKKVE 237

Query: 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI 310
           + +GS  +V+ +C G + ++ T + AT  GG + ++G+    + + L  AA REVD+ G+
Sbjct: 238 SVLGSKPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGV 297

Query: 311 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
           FRY +TWP+ +  L S  ++VKPL+THRF   +K +E AFE +A+ G  +KVM  
Sbjct: 298 FRYCNTWPMAVSMLASKTLNVKPLVTHRFPL-EKAVE-AFE-TAKKGLGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|A1CFY8|XYL2_ASPCL Probable D-xylulose reductase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xdhA PE=3 SV=2

 Score =  267 bits (683), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 147/355 (41%), Positives = 213/355 (60%), Gaps = 16/355 (4%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI 72
           QN++  L GI  +K +   +P L  P DV V +K  GICGSDVH+++   +      +F+
Sbjct: 9   QNLSFVLEGIHQVKFEDRPIPELRDPHDVIVNVKYTGICGSDVHYWEHGAI-----GHFV 63

Query: 73  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 132
           VK PMV+GHE +G++ +VGS V SL+VGDRVA+EPG+ C  C  CKAG YNLC +M F  
Sbjct: 64  VKDPMVLGHESSGVVAKVGSAVTSLKVGDRVAMEPGVPCRRCEPCKAGKYNLCEKMAFAA 123

Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS 192
           +PP +G+LA     P   CYKLP+N+SL+EGA+ EPL V VH  R+A++ P  +V++ G+
Sbjct: 124 TPPYDGTLAKYYPLPEDFCYKLPENISLQEGALMEPLGVAVHITRQASIKPGESVVVFGA 183

Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD---ETAKVSTDIEDVDTDVGKI 249
           GP+GL+    ARAFGA +II  D+   RL  A+   A    E AKVS      + D  + 
Sbjct: 184 GPVGLLCCAVARAFGASKIIAVDIQKTRLDFAKKYAATAIFEPAKVSA---VANADQMRE 240

Query: 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 309
           +N +G G DV  D  G + ++ T ++  RPGG     G+ + E+   +  A  +E+ + G
Sbjct: 241 ENDLGPGADVVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEINFPIMAACTKELTIKG 300

Query: 310 IFRYRS-TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
            FRY S  + L ++ + SGK++VK LIT    F  +E E AF+   + G  IK +
Sbjct: 301 SFRYGSGDYKLAVDLVASGKVNVKDLITGVVEF--QEAEQAFK-EVKAGKGIKTL 352

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

>sp|Q5ARL6|XYL2_EMENI Probable D-xylulose reductase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xdhA PE=3 SV=1

 Score =  266 bits (679), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 144/352 (40%), Positives = 208/352 (59%), Gaps = 10/352 (2%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI 72
           QN++  L GI  +K +   +P L  P DV V +K  GICGSDVH++    +       F+
Sbjct: 9   QNLSFVLEGIHRVKFEDRPIPKLKSPHDVIVNVKYTGICGSDVHYWDHGAI-----GQFV 63

Query: 73  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 132
           VK+PMV+GHE +GI+ ++GS V SL+VGD VA+EPGI C  C  CKAG YNLC +M F  
Sbjct: 64  VKEPMVLGHESSGIVTQIGSAVTSLKVGDHVAMEPGIPCRRCEPCKAGKYNLCEKMAFAA 123

Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS 192
           +PP +G+LA     P   CYKLP+++SL EGA+ EPL V VH  R+ANV P   V++ G+
Sbjct: 124 TPPYDGTLAKYYTLPEDFCYKLPESISLPEGALMEPLGVAVHIVRQANVTPGQTVVVFGA 183

Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           GP+GL+    A+AFGA RII  D+   RL  A+   A  T + S      +      +N 
Sbjct: 184 GPVGLLCCAVAKAFGAIRIIAVDIQKPRLDFAKKFAATATFEPSKAPATENATRMIAEND 243

Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR 312
           +G G DV+ D  G + ++ T ++  RPGG     G+ ++EM   +  A  +E+++ G FR
Sbjct: 244 LGRGADVAIDASGVEPSVHTGIHVLRPGGTYVQGGMGRSEMNFPIMAACTKELNIKGSFR 303

Query: 313 YRS-TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
           Y S  + L ++ + SG+I+VK LIT    F  ++ E AF+   + G  IK +
Sbjct: 304 YGSGDYKLAVQLVASGQINVKELITGIVKF--EDAEQAFK-DVKTGKGIKTL 352

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
224122460	359	predicted protein [Populus trichocarpa]	0.948	0.966	0.832	1e-172
225469314	366	PREDICTED: L-idonate 5-dehydrogenase [Vi	0.950	0.950	0.810	1e-172
359490368	366	PREDICTED: L-idonate 5-dehydrogenase-lik	0.950	0.950	0.810	1e-172
297741127	346	unnamed protein product [Vitis vinifera]	0.945	1.0	0.811	1e-171
297741126	346	unnamed protein product [Vitis vinifera]	0.945	1.0	0.811	1e-171
147767778	368	hypothetical protein VITISV_028585 [Viti	0.950	0.945	0.802	1e-169
350538545	355	sorbitol related enzyme [Solanum lycoper	0.964	0.994	0.754	1e-162
224120122	364	predicted protein [Populus trichocarpa]	0.956	0.961	0.760	1e-162
356559880	364	PREDICTED: L-idonate 5-dehydrogenase-lik	0.969	0.975	0.745	1e-161
358345351	362	L-idonate 5-dehydrogenase [Medicago trun	0.967	0.977	0.724	1e-160

>gi|224122460|ref|XP_002318842.1| predicted protein [Populus trichocarpa] gi|222859515|gb|EEE97062.1| predicted protein [Populus trichocarpa]

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 293/352 (83%), Positives = 323/352 (91%), Gaps = 5/352 (1%)

Query: 15  NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK 74
           N AAWLLGIKTLKIQPYHLP LGP DVKVRIKALGICGSDVHHFK     TMRCA+F+VK
Sbjct: 13  NKAAWLLGIKTLKIQPYHLPPLGPLDVKVRIKALGICGSDVHHFK-----TMRCASFVVK 67

Query: 75  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
           KPMVIGHECAGIIE+VGSEVKSL VGDRVALEPGISC  C+LCK G YNLCPEM+FFGSP
Sbjct: 68  KPMVIGHECAGIIEDVGSEVKSLAVGDRVALEPGISCRRCNLCKEGRYNLCPEMKFFGSP 127

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGP 194
           PTNGSLA+KVVHPA LC+KLPDNVSLEEGAMCEPLSVGVHACRRA +GPETNV+IMG+GP
Sbjct: 128 PTNGSLANKVVHPANLCFKLPDNVSLEEGAMCEPLSVGVHACRRAQIGPETNVLIMGAGP 187

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
           IGL+TLLA+RAFGAPR++I DVD +RLSIA+NLGADE   VST+I+DVD +V KIQNAMG
Sbjct: 188 IGLITLLASRAFGAPRVVIVDVDDRRLSIAKNLGADEIIHVSTNIQDVDEEVIKIQNAMG 247

Query: 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR 314
           SGIDVSFDCVG++KTM+TALNAT+ GGKVCLIGLA TEMTV LTP+AAREVDVIGIFRYR
Sbjct: 248 SGIDVSFDCVGYNKTMTTALNATQSGGKVCLIGLALTEMTVPLTPSAAREVDVIGIFRYR 307

Query: 315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           +TWPLCIEFL++GKIDVKPLITHRF F+Q+E+E AFE SA GGNAIKVMFNL
Sbjct: 308 NTWPLCIEFLKTGKIDVKPLITHRFRFSQEEVEQAFETSAGGGNAIKVMFNL 359

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469314|ref|XP_002269936.1| PREDICTED: L-idonate 5-dehydrogenase [Vitis vinifera] gi|229830633|sp|Q1PSI9.2|IDND_VITVI RecName: Full=L-idonate 5-dehydrogenase

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 286/353 (81%), Positives = 326/353 (92%), Gaps = 5/353 (1%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIV 73
           +NMAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFK     TMRCANFIV
Sbjct: 19  ENMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFK-----TMRCANFIV 73

Query: 74  KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 133
           KKPMVIGHECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FFGS
Sbjct: 74  KKPMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGS 133

Query: 134 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSG 193
           PPTNGSLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSG
Sbjct: 134 PPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSG 193

Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
           PIGLVT+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M
Sbjct: 194 PIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTM 253

Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 313
            +G+DVSFDCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRY
Sbjct: 254 VTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRY 313

Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           R+TWPLC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 314 RNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490368|ref|XP_002267662.2| PREDICTED: L-idonate 5-dehydrogenase-like [Vitis vinifera] gi|74273318|gb|ABA01327.1| L-idonate dehydrogenase [Vitis vinifera]

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 286/353 (81%), Positives = 326/353 (92%), Gaps = 5/353 (1%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIV 73
           +NMAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFK     TMRCANFIV
Sbjct: 19  ENMAAWLLGIKTLKIQPYILPSLGPHDVKVRIKAVGICGSDVHHFK-----TMRCANFIV 73

Query: 74  KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 133
           KKPMVIGHECAGIIEEVGSEVK+L VGDRVALEPGISC  CSLC+ G YNLC EM+FFGS
Sbjct: 74  KKPMVIGHECAGIIEEVGSEVKNLVVGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGS 133

Query: 134 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSG 193
           PPTNGSLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSG
Sbjct: 134 PPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSG 193

Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
           PIGLVT+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M
Sbjct: 194 PIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTM 253

Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 313
            +G+DVS DCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRY
Sbjct: 254 VTGVDVSLDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRY 313

Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           R+TWPLC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 314 RNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741127|emb|CBI31858.3| unnamed protein product [Vitis vinifera]

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/351 (81%), Positives = 324/351 (92%), Gaps = 5/351 (1%)

Query: 16  MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK 75
           MAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFK     TMRCANFIVKK
Sbjct: 1   MAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFK-----TMRCANFIVKK 55

Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
           PMVIGHECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FFGSPP
Sbjct: 56  PMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPP 115

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPI 195
           TNGSLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPI
Sbjct: 116 TNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPI 175

Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
           GLVT+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M +
Sbjct: 176 GLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVT 235

Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS 315
           G+DVSFDCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRYR+
Sbjct: 236 GVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRN 295

Query: 316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           TWPLC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 296 TWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741126|emb|CBI31857.3| unnamed protein product [Vitis vinifera]

 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/351 (81%), Positives = 324/351 (92%), Gaps = 5/351 (1%)

Query: 16  MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK 75
           MAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFK     TMRCANFIVKK
Sbjct: 1   MAAWLLGIKTLKIQPYILPSLGPHDVKVRIKAVGICGSDVHHFK-----TMRCANFIVKK 55

Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
           PMVIGHECAGIIEEVGSEVK+L VGDRVALEPGISC  CSLC+ G YNLC EM+FFGSPP
Sbjct: 56  PMVIGHECAGIIEEVGSEVKNLVVGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPP 115

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPI 195
           TNGSLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPI
Sbjct: 116 TNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPI 175

Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
           GLVT+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M +
Sbjct: 176 GLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVT 235

Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS 315
           G+DVS DCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRYR+
Sbjct: 236 GVDVSLDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRN 295

Query: 316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           TWPLC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 296 TWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767778|emb|CAN73609.1| hypothetical protein VITISV_028585 [Vitis vinifera]

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 285/355 (80%), Positives = 325/355 (91%), Gaps = 7/355 (1%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLG--PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           +NMAAWLLGIKTLKIQPY LP+LG  P DVKV IKA+GICGSDVHHFK     TMRCANF
Sbjct: 19  ENMAAWLLGIKTLKIQPYILPSLGIIPYDVKVXIKAVGICGSDVHHFK-----TMRCANF 73

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           IVKKPMVIGHECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FF
Sbjct: 74  IVKKPMVIGHECAGIIEEVGSEVKNLVXGDRVALEPGISCNRCSLCRNGQYNLCREMKFF 133

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
           GSPPTNGSLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMG
Sbjct: 134 GSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMG 193

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           SGPIGLVT+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+
Sbjct: 194 SGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQS 253

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            M +G+DVSFDCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIF
Sbjct: 254 TMVTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIF 313

Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           RYR+TWPLC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 314 RYRNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 368

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538545|ref|NP_001234092.1| sorbitol related enzyme [Solanum lycopersicum] gi|78183416|dbj|BAE47038.1| sorbitol related enzyme [Solanum lycopersicum]

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 270/358 (75%), Positives = 317/358 (88%), Gaps = 5/358 (1%)

Query: 9   EGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC 68
           +G  ++NMAAWLLG+ TLKIQP++LP LGP DV+VR+KA+GICGSDVH+ K     TMRC
Sbjct: 3   KGGSDENMAAWLLGVNTLKIQPFNLPALGPHDVRVRMKAVGICGSDVHYLK-----TMRC 57

Query: 69  ANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM 128
           A+F+VK+PMVIGHECAGIIEEVG EVK+L  GDRVALEPGISC  C+LCK G YNLCPEM
Sbjct: 58  ADFVVKEPMVIGHECAGIIEEVGGEVKTLVPGDRVALEPGISCWRCNLCKEGRYNLCPEM 117

Query: 129 RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVM 188
           +FF +PP +GSLA++VVHPA LC+KLPD++SLEEGAMCEPLSVGVHACRRANVGPETN++
Sbjct: 118 KFFATPPVHGSLANQVVHPADLCFKLPDDISLEEGAMCEPLSVGVHACRRANVGPETNIL 177

Query: 189 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248
           ++G+GPIGLVTLLAARAFGAPRI+I DVD  RLS+A+ LGAD+  KVS +I+DV TD+  
Sbjct: 178 VLGAGPIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKKLGADDIVKVSINIQDVATDIEN 237

Query: 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVI 308
           IQ AMG GID SFDC GF+KTMSTAL ATRPGGKVCL+G+   EMTV LTPAAAREVDVI
Sbjct: 238 IQKAMGGGIDASFDCAGFNKTMSTALGATRPGGKVCLVGMGHHEMTVPLTPAAAREVDVI 297

Query: 309 GIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           GIFRY++TWPLC+EFLRSGKIDVKPLITHRFGF+Q+E+E+AFE SA+GG+AIKVMFNL
Sbjct: 298 GIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQEEVEEAFETSARGGDAIKVMFNL 355

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120122|ref|XP_002318247.1| predicted protein [Populus trichocarpa] gi|222858920|gb|EEE96467.1| predicted protein [Populus trichocarpa]

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 270/355 (76%), Positives = 314/355 (88%), Gaps = 5/355 (1%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           + +NMAAWLLG+ TLKIQP+ LP LGP DV+VR+KA+GICGSDVH+ K     TM+CA+F
Sbjct: 15  EEENMAAWLLGVNTLKIQPFKLPCLGPHDVRVRMKAVGICGSDVHYLK-----TMKCAHF 69

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           +VK+PMVIGHECAGIIEEVGSE+KSL  GDRVALEPGISC  C LCK G YNLCP+M+FF
Sbjct: 70  VVKEPMVIGHECAGIIEEVGSEIKSLVPGDRVALEPGISCWRCYLCKEGRYNLCPDMKFF 129

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +GSLA++VVHPA LC+KLPDNVSLEEGAMCEPLSVGVHACRRAN+GPETNV++MG
Sbjct: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMG 189

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIGLVTLLAARAFGAPRI+I DVD  RLS+A++LGADE  KVST+++DVD +V  I  
Sbjct: 190 AGPIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNLQDVDQEVVLIHQ 249

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
           AMG+G+DV+FDC GF+KTMSTAL+ATRPGGKVCLIG+   EMTV LTPAAAREVDVIG+F
Sbjct: 250 AMGTGVDVTFDCAGFNKTMSTALSATRPGGKVCLIGMGHNEMTVPLTPAAAREVDVIGVF 309

Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           RY++TWPLCIEFL SGKIDVKPLITHRFGF+QKE+E+AFE SA G  AIKVMFNL
Sbjct: 310 RYKNTWPLCIEFLSSGKIDVKPLITHRFGFSQKEVEEAFETSASGSTAIKVMFNL 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559880|ref|XP_003548224.1| PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/361 (74%), Positives = 322/361 (89%), Gaps = 6/361 (1%)

Query: 7   DDEGD-KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLST 65
           D+ G+ K +NMAAWL+G+ TLKIQP+ LPTLGP DV+VR+KA+GICGSDVH+ K     T
Sbjct: 9   DEHGEGKEENMAAWLVGMNTLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHYLK-----T 63

Query: 66  MRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 125
           +RCA+FIVK+PMVIGHECAGIIEEVGS+VKSL  GDRVA+EPGISC HC+ CK G YNLC
Sbjct: 64  LRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWHCNHCKHGRYNLC 123

Query: 126 PEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPET 185
            +M+FF +PP +GSLA+++VHPA LC+KLPDNVSLEEGAMCEPLSVGVHACRRAN+GPET
Sbjct: 124 DDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPET 183

Query: 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245
           NV+IMG+GPIGLVT+LAARAFGAP+ +I DVD  RLS+A++LGAD+  KVST+I+DV  +
Sbjct: 184 NVLIMGAGPIGLVTMLAARAFGAPKTVIVDVDDHRLSVAKSLGADDIIKVSTNIKDVAEE 243

Query: 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREV 305
           V +IQ  MG+GIDV+FDC GFDKTMSTAL+AT+PGGKVCL+G+  +EMTV LTPAAAREV
Sbjct: 244 VVQIQKVMGAGIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAAREV 303

Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
           DV+G+FRY +TWPLC+EFLRSGKIDVKPLITHRFGF+QKE+E+AFE SA+GGNAIKVMFN
Sbjct: 304 DVVGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363

Query: 366 L 366
           L
Sbjct: 364 L 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345351|ref|XP_003636744.1| L-idonate 5-dehydrogenase [Medicago truncatula] gi|355502679|gb|AES83882.1| L-idonate 5-dehydrogenase [Medicago truncatula]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 260/359 (72%), Positives = 321/359 (89%), Gaps = 5/359 (1%)

Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
           D+  + QNMAAWL+G+ TLKIQP++LP+LGP DV++++KA+GICGSDVH+ K     T+R
Sbjct: 9   DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHYLK-----TLR 63

Query: 68  CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
           CA+FIVK+PMVIGHECAGIIEEVGS+VK+L  GDRVA+EPGISC  C  CK G YNLCP+
Sbjct: 64  CADFIVKEPMVIGHECAGIIEEVGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRYNLCPD 123

Query: 128 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNV 187
           M+FF +PP +GSLA+++VHPA LC+KLP+NVSLEEGAMCEPLSVGVHACRRAN+GPETNV
Sbjct: 124 MKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNV 183

Query: 188 MIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247
           +IMG+GPIGLVT+L+ARAFGAPRI++ DVD  RLS+A++LGAD+  KVST+I+DV  +V 
Sbjct: 184 LIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDVAEEVK 243

Query: 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDV 307
           +I N +G+G+DV+FDC GF+KTM+TAL AT+PGGKVCL+G+  +EMTV LTPAAAREVDV
Sbjct: 244 QIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAAREVDV 303

Query: 308 IGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           +GIFRY++TWPLC+EFLRSGKIDVKPLITHRFGF+QKE+E+AFE SA+GGNAIKVMFNL
Sbjct: 304 VGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
TAIR|locus:2173093	364	AT5G51970 [Arabidopsis thalian	0.964	0.969	0.736	1.2e-145
FB|FBgn0022359	360	Sodh-2 "Sorbitol dehydrogenase	0.939	0.955	0.453	3.7e-80
FB|FBgn0024289	360	Sodh-1 "Sorbitol dehydrogenase	0.939	0.955	0.456	2e-79
WB|WBGene00011003	347	R04B5.5 [Caenorhabditis elegan	0.923	0.974	0.438	1.8e-78
UNIPROTKB|Q4R639	357	SORD "Sorbitol dehydrogenase"	0.934	0.957	0.440	3.8e-78
UNIPROTKB|Q00796	357	SORD "Sorbitol dehydrogenase"	0.934	0.957	0.446	1e-77
UNIPROTKB|F1PXG0	356	SORD "Uncharacterized protein"	0.934	0.960	0.440	7.1e-77
UNIPROTKB|Q58D31	356	SORD "Sorbitol dehydrogenase"	0.931	0.957	0.447	1.1e-76
UNIPROTKB|Q5R5F3	357	SORD "Sorbitol dehydrogenase"	0.934	0.957	0.448	1.1e-76
UNIPROTKB|H0YLA4	336	SORD "Sorbitol dehydrogenase"	0.890	0.970	0.455	2.4e-76

TAIR|locus:2173093 AT5G51970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
 Identities = 265/360 (73%), Positives = 313/360 (86%)

Query:     9 EGDK--NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM 66
             EG K   +NMAAWL+GI TLKIQP+ LP++GP DV+VR+KA+GICGSDVH+ K     TM
Sbjct:    10 EGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHYLK-----TM 64

Query:    67 RCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP 126
             RCA+F+VK+PMVIGHECAGIIEEVG EVK L VGDRVALEPGISC  C+LC+ G YNLCP
Sbjct:    65 RCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRYNLCP 124

Query:   127 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETN 186
             EM+FF +PP +GSLA++VVHPA LC+KLP+NVSLEEGAMCEPLSVGVHACRRA VGPETN
Sbjct:   125 EMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETN 184

Query:   187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 246
             V++MG+GPIGLVT+LAARAF  PRI+I DVD  RL++A+ LGADE  +V+T++EDV ++V
Sbjct:   185 VLVMGAGPIGLVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDVGSEV 244

Query:   247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVD 306
              +IQ AMGS IDV+FDC GF+KTMSTAL ATR GGKVCL+G+    MTV LTPAAAREVD
Sbjct:   245 EQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAAREVD 304

Query:   307 VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
             V+G+FRY++TWPLC+EFL SGKIDVKPLITHRFGF+QKE+EDAFE SA+G NAIKVMFNL
Sbjct:   305 VVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIKVMFNL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

FB|FBgn0022359 Sodh-2 "Sorbitol dehydrogenase-2" [Drosophila melanogaster (taxid:7227)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 160/353 (45%), Positives = 232/353 (65%)

Query:    15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK 74
             N+ A L GI+ L+++   +P +   +V + + ++GICGSDVH+     L+  R  +F++ 
Sbjct:     5 NLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHY-----LAHGRIGDFVLT 59

Query:    75 KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
             KPM+IGHE AG++ ++G +V +L+VGDRVA+EPG+ C +C  CK G YNLC +M F  +P
Sbjct:    60 KPMIIGHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATP 119

Query:   135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGP 194
             P +G+L     H A  C+KLPD+VS+EEGA+ EPLSVGVHACRRA VG  + V+I+G+GP
Sbjct:   120 PYDGNLTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGP 179

Query:   195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
             IGLVTLLAA+A GA  I+ITD+  QRL +A+ LGA  T  +  D +  +  V  +   M 
Sbjct:   180 IGLVTLLAAQAMGASEILITDLVQQRLDVAKELGATHTLLLQRD-QSAEETVKVVHQTMS 238

Query:   255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR 314
                D S DC G + +   A+ ATR GG V ++G+   E+ + L  A ARE+D+ G+FRY 
Sbjct:   239 EVPDKSIDCCGAESSARLAIFATRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYC 298

Query:   315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL 366
             + +   +  + SGK++VK L+TH +  T  E  +AFE S +G G AIKVM ++
Sbjct:   299 NDYSAALALVASGKVNVKRLVTHHYDIT--ETAEAFETSRRGTGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0024289 Sodh-1 "Sorbitol dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
 Identities = 161/353 (45%), Positives = 231/353 (65%)

Query:    15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK 74
             N+ A L GI+ ++++   +P +   +V + + ++GICGSDVH+     L+  R  +F++ 
Sbjct:     5 NLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHY-----LAHGRIGDFVLT 59

Query:    75 KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
             KPM+IGHE AG++ ++G +V +L+VGDRVA+EPG+ C  C  CK G YNLCP M F  +P
Sbjct:    60 KPMIIGHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATP 119

Query:   135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGP 194
             P +G+L     H A  C+KLPD+V++EEGA+ EPLSVGVHAC+RA V   + V+I+G+GP
Sbjct:   120 PYDGNLTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGP 179

Query:   195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
             IGLVTL+AA+A GA  I+ITD+  QRL +A+ LGA  T  +  D    +T V  +Q  MG
Sbjct:   180 IGLVTLMAAQAMGASEILITDLVQQRLDVAKELGATHTLLLKRDQTAEETAV-LVQKTMG 238

Query:   255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR 314
                D S DC G + +   A+ ATR GG V ++G+   E+ + L  A AREVD+ G+FRY 
Sbjct:   239 GQPDKSIDCCGAESSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYC 298

Query:   315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL 366
             + +   +  + SGK++VK L+TH F    KE   AFE S +G G AIKVM ++
Sbjct:   299 NDYAAALALVASGKVNVKRLVTHHFDI--KETAKAFETSRKGLGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00011003 R04B5.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 153/349 (43%), Positives = 229/349 (65%)

Query:    15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK 74
             N++A L G+  L+++   +P  GP  V V++  +GICGSDVH++    +       F+VK
Sbjct:     5 NLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGP-----FVVK 59

Query:    75 KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
             +PM++GHE +GI+ EVG+EVK L+VGDR+A+EPG+ C  C  CK G YNLCPEMRFF +P
Sbjct:    60 EPMIVGHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATP 119

Query:   135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGP 194
             P +G+L+  VVH A  C+KLPDN+S E+GA+ EPLSV +HACRR NV     V+++G+GP
Sbjct:   120 PVHGTLSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGP 179

Query:   195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
             IG++ L+ A+A GA +++ITD+D  RL++A+ LGAD T  V    + +D    +I  A+G
Sbjct:   180 IGVLNLITAKAVGAGKVVITDLDDGRLALAKKLGADATINVKG--KSLDAVKSEIITALG 237

Query:   255 SGI-DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 313
                 DV  +C G   ++ TA+  T+ GG + L+GL    + + +  +A REVD+ GIFRY
Sbjct:   238 DQQPDVCIECTGAQPSIETAITTTKSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRY 297

Query:   314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 362
              + +P  IE + SGK+++  L   R  +  +E ++AF+   Q  + IKV
Sbjct:   298 VNCYPTAIELISSGKLNLSGLT--RAHYKLEETQEAFK-RTQKADVIKV 343

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

UNIPROTKB|Q4R639 SORD "Sorbitol dehydrogenase" [Macaca fascicularis (taxid:9541)]

 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 155/352 (44%), Positives = 231/352 (65%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
             K +N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  ++      NF
Sbjct:     6 KPKNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIG-----NF 60

Query:    72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
             IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG+   +   CK+G YNL P + F 
Sbjct:    61 IVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFC 120

Query:   132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
              +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G
Sbjct:   121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCG 180

Query:   192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
             +GPIG+V+LL A+A GA ++++TD+   RLS A+ +GAD   ++S   E      GK++ 
Sbjct:   181 AGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISK--ESPQEIAGKVEG 238

Query:   252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
              +G   +V+ +C G + ++   + ATR GG + L+GL     T+ L  AA REVD+ G+F
Sbjct:   239 LLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVF 298

Query:   312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
             RY +TWP+ I  L S  +++KPL+THRF   +K +E AFE + + G  +K+M
Sbjct:   299 RYCNTWPVAISMLASKSVNIKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIM 347

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|Q00796 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
 Identities = 157/352 (44%), Positives = 227/352 (64%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
             K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  ++      NF
Sbjct:     6 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIG-----NF 60

Query:    72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
             IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F 
Sbjct:    61 IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 120

Query:   132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
              +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G
Sbjct:   121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 180

Query:   192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
             +GPIG+VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct:   181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 238

Query:   252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
              +G   +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+F
Sbjct:   239 QLGCKPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVF 298

Query:   312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
             RY +TWP+ I  L S  ++VKPL+THRF   +K +E AFE + + G  +K+M
Sbjct:   299 RYCNTWPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIM 347

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=ISS;IDA

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006062 "sorbitol catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=NAS

GO:0016020 "membrane" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=IDA

GO:0051164 "L-xylitol metabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0030317 "sperm motility" evidence=ISS;NAS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|F1PXG0 SORD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 155/352 (44%), Positives = 228/352 (64%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
             K +N+   + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  ++      +F
Sbjct:     5 KAENLTLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIG-----DF 59

Query:    72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
             IVKKPMV+GHE +G + +VGS VK L+ GDRVA+EPG        CK G YNL P + F 
Sbjct:    60 IVKKPMVLGHEASGTVVKVGSLVKHLKSGDRVAIEPGALREMDEFCKIGRYNLSPSIFFC 119

Query:   132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
              +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA +     V++ G
Sbjct:   120 ATPPDDGNLCQFYKHNADFCYKLPDNVTYEEGALIEPLSVGIHACRRAGITLGNKVLVCG 179

Query:   192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
             +GPIGLVTL+ A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K+++
Sbjct:   180 AGPIGLVTLIVAKAMGAGQVLVTDLSASRLSKAKEVGADIVLQISK--ESPKEIASKVED 237

Query:   252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
              +G   + + +C G +  + + + ATR GG + L+GL     TV LT A+ REVD+ G+F
Sbjct:   238 MLGCKPEATIECTGVESAIQSGIYATRAGGTLVLVGLGSEMTTVPLTHASTREVDIKGVF 297

Query:   312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
             RY +TWP+ I  L S  ++VKPL+THRF   +K +E AFE +A+ G  +KVM
Sbjct:   298 RYCNTWPMAISMLASKAVNVKPLVTHRFPL-EKALE-AFE-TARKGTGLKVM 346

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q58D31 SORD "Sorbitol dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 158/353 (44%), Positives = 231/353 (65%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
             K +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  ++      +F
Sbjct:     5 KPENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIG-----DF 59

Query:    72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
             +VKKPMV+GHE +G + +VGS V+ L+ GDRVA+EPG        CK G YNL P + F 
Sbjct:    60 VVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFC 119

Query:   132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
              +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G
Sbjct:   120 ATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCG 179

Query:   192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
             +GPIGLV+LLAA+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct:   180 AGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISN--ESPQEIAKKVEG 237

Query:   252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGI 310
              +GS  +V+ +C G + ++   + AT  GG + L+GL  +EMT V L  AA REVD+ G+
Sbjct:   238 LLGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLG-SEMTSVPLVHAATREVDIKGV 296

Query:   311 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
             FRY +TWP+ I  L S  ++VKPL+THRF   +K +E AFE S +G   +KVM
Sbjct:   297 FRYCNTWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKKG-LGLKVM 346

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5R5F3 SORD "Sorbitol dehydrogenase" [Pongo abelii (taxid:9601)]

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 158/352 (44%), Positives = 224/352 (63%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
             K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++       R  NF
Sbjct:     6 KPSNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWE-----DGRIGNF 60

Query:    72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
             IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F 
Sbjct:    61 IVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFC 120

Query:   132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
              +PP +G+L     H A  CYKLPDNV+ EEGAM EPLSVG+HACRR  V     V++ G
Sbjct:   121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCG 180

Query:   192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
             +GPIG+VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct:   181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 238

Query:   252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
              +G   +V+ +C G   ++   + AT  GG + L+GL     T+ L  AA REVD+ G+F
Sbjct:   239 LLGCKPEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVF 298

Query:   312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
             RY +TWP+ I  L S  ++VKPLITHRF   +K +E AFE + + G  +K+M
Sbjct:   299 RYCNTWPVAISMLASKSVNVKPLITHRFPL-EKALE-AFE-TFKKGLGLKIM 347

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|H0YLA4 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
 Identities = 153/336 (45%), Positives = 219/336 (65%)

Query:    28 IQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII 87
             ++ Y +P  GP +V +R+ ++GICGSDVH+++  ++      NFIVKKPMV+GHE +G +
Sbjct:     1 MENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIG-----NFIVKKPMVLGHEASGTV 55

Query:    88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP 147
             E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP +G+L     H 
Sbjct:    56 EKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHN 115

Query:   148 AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 207
             A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG+VTLL A+A G
Sbjct:   116 AAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG 175

Query:   208 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD 267
             A ++++TD+   RLS A+ +GAD   ++S   E       K++  +G   +V+ +C G +
Sbjct:   176 AAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCKPEVTIECTGAE 233

Query:   268 KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSG 327
              ++   + ATR GG + L+GL     TV L  AA REVD+ G+FRY +TWP+ I  L S 
Sbjct:   234 ASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASK 293

Query:   328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
              ++VKPL+THRF   +K +E AFE + + G  +K+M
Sbjct:   294 SVNVKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIM 326

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A8GLC6	TDH_SERP5	1, ., 1, ., 1, ., 1, 0, 3	0.3273	0.8497	0.9120	yes	no
Q64442	DHSO_MOUSE	1, ., 1, ., 1, ., 1, 4	0.4265	0.9398	0.9635	yes	no
A2QY54	XYL2_ASPNC	1, ., 1, ., 1, ., 9	0.3920	0.9344	0.9553	yes	no
Q15ZU4	TDH_PSEA6	1, ., 1, ., 1, ., 1, 0, 3	0.3063	0.8934	0.9617	yes	no
P27867	DHSO_RAT	1, ., 1, ., 1, ., 1, 4	0.4225	0.9371	0.9607	yes	no
Q5ARL6	XYL2_EMENI	1, ., 1, ., 1, ., 9	0.4090	0.9344	0.9526	yes	no
A1JHX8	TDH_YERE8	1, ., 1, ., 1, ., 1, 0, 3	0.3175	0.8633	0.9266	yes	no
Q92MT4	XYLD_RHIME	1, ., 1, ., 1, ., 9	0.3821	0.8060	0.8526	yes	no
Q58D31	DHSO_BOVIN	1, ., 1, ., 1, ., 1, 4	0.4419	0.9371	0.9634	yes	no
B2JYP4	TDH_YERPB	1, ., 1, ., 1, ., 1, 0, 3	0.3204	0.8633	0.9266	yes	no
Q07786	DHSO2_YEAST	1, ., 1, ., 1, ., 1, 4	0.3882	0.9398	0.9635	yes	no
Q48AM4	TDH_COLP3	1, ., 1, ., 1, ., 1, 0, 3	0.3253	0.8524	0.9149	yes	no
Q00796	DHSO_HUMAN	1, ., 1, ., 1, ., 1, 4	0.4475	0.9371	0.9607	yes	no
Q9RTU4	TDH_DEIRA	1, ., 1, ., 1, ., 1, 0, 3	0.3363	0.8579	0.9022	yes	no
Q8U259	TDH_PYRFU	1, ., 1, ., 1, ., 1, 0, 3	0.3343	0.8743	0.9195	yes	no
Q5GN51	XYL2_ASPNG	1, ., 1, ., 1, ., 9	0.3920	0.9344	0.9553	yes	no
P36624	DHSO_SCHPO	1, ., 1, ., 1, ., 1, 4	0.3780	0.8606	0.875	yes	no
Q98D10	XYLD_RHILO	1, ., 1, ., 1, ., 9	0.3723	0.8715	0.9166	yes	no
Q1PSI9	IDND_VITVI	1, ., 1, ., 1, ., n, 8	0.8101	0.9508	0.9508	yes	no
P35497	DHSO1_YEAST	1, ., 1, ., 1, ., 1, 4	0.3854	0.9398	0.9635	yes	no
A7FCU5	TDH_YERP3	1, ., 1, ., 1, ., 1, 0, 3	0.3204	0.8633	0.9266	yes	no
Q66GC5	TDH_YERPS	1, ., 1, ., 1, ., 1, 0, 3	0.3204	0.8633	0.9266	yes	no
P22144	XYL2_PICST	1, ., 1, ., 1, ., 9	0.3396	0.9207	0.9283	yes	no
B1JQW2	TDH_YERPY	1, ., 1, ., 1, ., 1, 0, 3	0.3204	0.8633	0.9266	yes	no
Q4WAU7	XYL2_ASPFU	1, ., 1, ., 1, ., 9	0.4213	0.9234	0.9441	yes	no
A6W1W3	TDH_MARMS	1, ., 1, ., 1, ., 1, 0, 3	0.3251	0.8415	0.9032	yes	no
Q06004	DHSO_BACSU	1, ., 1, ., 1, ., 1, 4	0.3966	0.9262	0.9603	yes	no
Q3IHW0	TDH_PSEHT	1, ., 1, ., 1, ., 1, 0, 3	0.3242	0.8579	0.9208	yes	no
Q5R5F3	DHSO_PONAB	1, ., 1, ., 1, ., 1, 4	0.4475	0.9371	0.9607	yes	no
Q8U7Y1	XYLD_AGRT5	1, ., 1, ., 1, ., 9	0.3766	0.8060	0.8428	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.n8	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	366
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.0
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-174
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-98
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-96
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	2e-90
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-88
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	3e-86
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-84
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	7e-80
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-70
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	3e-70
cd05281	341	cd05281, TDH, Threonine dehydrogenase	4e-69
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	2e-68
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	8e-63
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	7e-62
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	1e-61
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	3e-61
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	6e-58
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	7e-54
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	2e-52
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-52
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	6e-52
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	8e-52
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	1e-51
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	2e-51
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	7e-51
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	7e-50
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	7e-48
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	7e-46
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	9e-46
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-45
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	6e-45
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	6e-45
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	9e-44
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-43
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-43
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-43
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-42
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	2e-42
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-41
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	6e-41
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	8e-41
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-40
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	6e-40
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-39
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-38
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	4e-38
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	2e-37
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-36
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-34
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-34
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	3e-31
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	1e-30
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-29
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	5e-29
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	4e-28
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	9e-28
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	6e-27
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	9e-27
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	4e-26
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	2e-25
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-25
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	6e-25
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	7e-25
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	8e-25
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	9e-25
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-24
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-24
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-24
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	3e-22
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	4e-22
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	8e-22
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-21
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	4e-21
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	4e-21
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	5e-21
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-20
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	3e-20
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	4e-20
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	3e-19
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-18
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-17
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	5e-17
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	7e-17
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	8e-17
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-16
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	5e-15
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	6e-15
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-14
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-14
cd08237	341	cd08237, ribitol-5-phosphate_DH, ribitol-5-phospha	3e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	4e-13
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	7e-13
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-12
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	3e-12
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	2e-11
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	4e-11
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-09
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	5e-08
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	6e-08
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-07
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	7e-07
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-06
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	4e-06
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	7e-06
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	7e-06
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-05
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-05
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-04
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	0.003

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  681 bits (1758), Expect = 0.0
 Identities = 275/360 (76%), Positives = 321/360 (89%), Gaps = 5/360 (1%)

Query: 7   DDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM 66
           +  G + +NMAAWL+G+ TLKIQP+ LP LGP DV+VR+KA+GICGSDVH+ K     TM
Sbjct: 10  EGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLK-----TM 64

Query: 67  RCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP 126
           RCA+F+VK+PMVIGHECAGIIEEVGSEVK L VGDRVALEPGISC  C+LCK G YNLCP
Sbjct: 65  RCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCP 124

Query: 127 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETN 186
           EM+FF +PP +GSLA++VVHPA LC+KLP+NVSLEEGAMCEPLSVGVHACRRAN+GPETN
Sbjct: 125 EMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETN 184

Query: 187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 246
           V++MG+GPIGLVT+LAARAFGAPRI+I DVD +RLS+A+ LGADE   VST+IEDV+++V
Sbjct: 185 VLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEV 244

Query: 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVD 306
            +IQ AMG GIDVSFDCVGF+KTMSTAL ATR GGKVCL+G+   EMTV LTPAAAREVD
Sbjct: 245 EEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVD 304

Query: 307 VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           V+G+FRYR+TWPLC+EFLRSGKIDVKPLITHRFGF+QKE+E+AFE SA+GGNAIKVMFNL
Sbjct: 305 VVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364

Length = 364

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  487 bits (1256), Expect = e-174
 Identities = 180/351 (51%), Positives = 239/351 (68%), Gaps = 11/351 (3%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
           AA L G   L+++   +P  GP +V VR++A+GICGSDVH++K       R  +F+VK+P
Sbjct: 1   AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYK-----HGRIGDFVVKEP 55

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 136
           MV+GHE AG +  VGS V  L+VGDRVA+EPG+ C  C  CK+G YNLCP+MRF  +PP 
Sbjct: 56  MVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPV 115

Query: 137 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 196
           +G+L   V HPA  C+KLPDNVSLEEGA+ EPLSVGVHACRRA V P   V++ G+GPIG
Sbjct: 116 DGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIG 175

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS- 255
           L+T   A+AFGA ++++TD+D  RL  A+ LGA  T  V T  ED      KI   +G  
Sbjct: 176 LLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELLGGK 233

Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS 315
           G DV  +C G +  + TA+ ATRPGG V L+G+ K E+T+ L+ A+ RE+D+ G+FRY +
Sbjct: 234 GPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYAN 293

Query: 316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 365
           T+P  IE L SGK+DVKPLITHRF    ++  +AFE +A+G    IKV+  
Sbjct: 294 TYPTAIELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE 342

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  295 bits (757), Expect = 2e-98
 Identities = 124/346 (35%), Positives = 182/346 (52%), Gaps = 18/346 (5%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
               L+++    P  GP +V+VR+ A GICGSD+H+++             +++PMV+GH
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQ-----HGGFGTVRLREPMVLGH 59

Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----PPTN 137
           E +G++E VG  V  L  G RVA+ P   CG C  C+AG  NLC  MRF GS    P   
Sbjct: 60  EVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQ 119

Query: 138 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
           G     +V  A  C  LPD +SL   A+ EPL+V +HA  RA       V++ G+GPIG 
Sbjct: 120 GGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGA 179

Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
           + + AAR  GA  I+ TD+    L++AR +GADET  ++ D             A     
Sbjct: 180 LVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYA-------ADKGDF 232

Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW 317
           DV F+  G    +++AL   RPGG V  +G+    + + L    A+E+D+ G FR+   +
Sbjct: 233 DVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEF 292

Query: 318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
              +  L +G+IDV+PLIT  F     E  +AF ++A    ++KV 
Sbjct: 293 AEAVRLLAAGRIDVRPLITAVFPLE--EAAEAFALAADRTRSVKVQ 336

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  290 bits (745), Expect = 1e-96
 Identities = 132/364 (36%), Positives = 190/364 (52%), Gaps = 36/364 (9%)

Query: 16  MAAWLL-GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK 74
           M A +L G   L+ +    P  GP +V V++KA GICGSD+  +                
Sbjct: 1   MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHP-------- 52

Query: 75  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
            P+V+GHE +G +EEVGS V  L VGDRVA+ P + CG C  CK G Y+LC    + GS 
Sbjct: 53  -PLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSR 111

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGP 194
             +G+ A  V  PA+   K+PD+V  EE AM EP +V +HA R A +     V+++G+G 
Sbjct: 112 -RDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGT 170

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM- 253
           IGL+ +   +  GA R+I  D+D ++L++AR LGAD+T      I   + DV K++    
Sbjct: 171 IGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDT------INPKEEDVEKVRELTE 224

Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA------REVDV 307
           G G D+  +  G   T+  AL   RPGGKV L+G+   ++T       A      +E+ +
Sbjct: 225 GRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT---LSEEAFEKILRKELTI 281

Query: 308 IGIFRYRST------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA-I 360
            G +   S       W   ++ L SGKI V+PLITHR     ++   AFE  A       
Sbjct: 282 QGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPL--EDGPAAFERLADREEFSG 339

Query: 361 KVMF 364
           KV+ 
Sbjct: 340 KVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  274 bits (703), Expect = 2e-90
 Identities = 124/351 (35%), Positives = 188/351 (53%), Gaps = 21/351 (5%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
           A    G   L+++   +P  GP +V +++ A GICG+D+H ++ +         F    P
Sbjct: 3   ALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGE---------FGAAPP 53

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 136
           +V GHE AG++  VGS+V   +VGDRVA++P I CG C  C+ G  NLC  +   G    
Sbjct: 54  LVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-R 112

Query: 137 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 196
           NG  A  VV PAK  YK+PDN+S EE A+ EPLS  VH      + P  +V++ G+GPIG
Sbjct: 113 NGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIG 172

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
           L+     +  GA R+ + + + ++L +A+ LGA ET      ++    D    +     G
Sbjct: 173 LLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATET------VDPSREDPEAQKEDNPYG 226

Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIGIFRYR 314
            DV  +  G  KT+  A+   R GG V + G+   +  V+++P     +E+ +IG F   
Sbjct: 227 FDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINP 286

Query: 315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
            T+P  I  L SGKIDVK L++HR     +E+ +A E   + G A+KV+  
Sbjct: 287 YTFPRAIALLESGKIDVKGLVSHRLPL--EEVPEALE-GMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  269 bits (690), Expect = 2e-88
 Identities = 120/359 (33%), Positives = 180/359 (50%), Gaps = 23/359 (6%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
           A   +G   ++++    P  GP DV +R+ A GICGSD+H ++  +        F+    
Sbjct: 4   AVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGE-------PFVPPGD 56

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--- 133
           +++GHE  G + EVG  V+  +VGDRV +EP I CGHC  C+AG YNLC    F+G    
Sbjct: 57  IILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGL 115

Query: 134 -PPTNGSLAHKVVHPAKLCY-KLPDNVSLEEGAMCEPLSVGVHAC-RRANVGPETNVMIM 190
               +G  A  V  PA     KLPD +  E  A+ EPL+   H    RA V P   V+++
Sbjct: 116 GGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVV 175

Query: 191 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250
           G+GPIGL+ +  A+  GA  +I+ D   +RL +A+  G  +      +  + D     ++
Sbjct: 176 GAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVV---VNPSEDDAGAEILE 232

Query: 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIG 309
              G G DV  + VG    +  AL A RPGG V ++G+   E          ++E+ + G
Sbjct: 233 LTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRG 292

Query: 310 IFR--YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 365
             R   R  +   ++ L SGKID + LITHR      +  +A+E+ A     AIKV+  
Sbjct: 293 SLRPSGREDFERALDLLASGKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLK 349

Length = 350

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  264 bits (677), Expect = 3e-86
 Identities = 130/346 (37%), Positives = 185/346 (53%), Gaps = 23/346 (6%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK- 75
           AA   G K ++++    P + P +VK+++   GICGSD+H +       +    FI  + 
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEY-------LDGPIFIPTEG 55

Query: 76  ---------PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP 126
                    P+ +GHE +G++ EVGS V   +VGDRV +EP I CG C  CK G YNLC 
Sbjct: 56  HPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCD 115

Query: 127 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETN 186
            + F G     G  A  VV PA   +KLPDNV LEE A+ EPL+V  HA RR+   P   
Sbjct: 116 SLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWHAVRRSGFKPGDT 175

Query: 187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 246
            +++G+GPIGL+T+LA +A GA +II+++    R  +A  LGA      +    DV  +V
Sbjct: 176 ALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEV 233

Query: 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVD 306
            K+    G G+DVSFDC G   T+ TA++A RP G    + + +  ++        +E  
Sbjct: 234 RKLTG--GGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKT 291

Query: 307 VIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
           + G   Y R  +   I+ L SGKID +PLIT R       +E  FE
Sbjct: 292 LTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDI-VEKGFE 336

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  259 bits (663), Expect = 2e-84
 Identities = 127/332 (38%), Positives = 186/332 (56%), Gaps = 19/332 (5%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  G  +V VR+K +GICGSD+H +           N     P ++GHE +G + EVG  
Sbjct: 20  PVPGAGEVLVRVKRVGICGSDLHIY--------HGRNPFASYPRILGHELSGEVVEVGEG 71

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           V  L+VGDRV ++P ISCG C  C+ G  N C  ++  G    +G  A  +V PA     
Sbjct: 72  VAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHR-DGGFAEYIVVPAD-ALL 129

Query: 154 LPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIII 213
           +P+ +SL++ A+ EPL++G HA RRA V     V+++G+GPIGL  +  A+A GA R+I+
Sbjct: 130 VPEGLSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIV 188

Query: 214 TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 273
            D+D +RL  AR LGAD+T  V    EDV   + ++ +  G G DV  D  G   +M  A
Sbjct: 189 VDIDDERLEFARELGADDTINVGD--EDVAARLRELTD--GEGADVVIDATGNPASMEEA 244

Query: 274 LNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK 332
           +     GG+V L+GL+K  +T        +E+ ++G     R  +P  I+ L SGK+D +
Sbjct: 245 VELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPE 304

Query: 333 PLITHRFGFTQKEIEDAFE-ISAQGGNAIKVM 363
            LITHRF F   ++ +AF+   A  G  IKV+
Sbjct: 305 ALITHRFPFE--DVPEAFDLWEAPPGGVIKVL 334

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  247 bits (634), Expect = 7e-80
 Identities = 130/357 (36%), Positives = 198/357 (55%), Gaps = 28/357 (7%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
           AA L G   ++++   +P  GP +V V+++A GICG+DV   +             +K P
Sbjct: 3   AAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGH--------TDLKPP 54

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 136
            ++GHE AG I EVG  V   +VGDRV + P + CG C  C  G+ N+CP  + FG+   
Sbjct: 55  RILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNL-Y 113

Query: 137 NGSLAHKVVHPAKLC-----YKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
           +G  A  V  PA         KLPDNVS EE A+ EPL+  ++A R+A + P   V+++G
Sbjct: 114 DGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIG 173

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIGL+  + A+A GA ++I++D++  RL  A+ LGAD T   +   ED+   V ++ +
Sbjct: 174 AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELTD 231

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA--AREVDVIG 309
             G G DV     G  +  + AL   R GG++   G      TV + P     RE+ + G
Sbjct: 232 --GRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITG 289

Query: 310 IFRYRST---WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
              Y ++   +   +E + SGKIDVK LITHRF    ++IE+AFE++A  G ++K++
Sbjct: 290 --SYAASPEDYKEALELIASGKIDVKDLITHRFPL--EDIEEAFELAAD-GKSLKIV 341

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  222 bits (568), Expect = 1e-70
 Identities = 106/299 (35%), Positives = 160/299 (53%), Gaps = 19/299 (6%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP +V +++ A GICGSD+H +K             V+ P+V+GHE +G I EVG +
Sbjct: 22  PEPGPGEVLIKVAAAGICGSDLHIYKGDYDP--------VETPVVLGHEFSGTIVEVGPD 73

Query: 94  VKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
           V+  +VGDRV  E    +CG C  C+ G YNLCP  +  G+   +G  A  V+ P +  +
Sbjct: 74  VEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ-ADGGFAEYVLVPEESLH 132

Query: 153 KLPDNVSLEEGAMCEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRI 211
           +LP+N+SLE  A+ EPL+V VHA   R+ + P   V++ G GPIGL+    A+  GA  +
Sbjct: 133 ELPENLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVV 192

Query: 212 II-TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM 270
           ++ T+ D  RL +A+ LGAD    V+   ED+   V +I +  G G DV  +C G    +
Sbjct: 193 VVGTEKDEVRLDVAKELGADA---VNGGEEDLAELVNEITD--GDGADVVIECSGAVPAL 247

Query: 271 STALNATRPGGKVCLIGL-AKTEMTVALTPAAAREVDVIGIFRYRST-WPLCIEFLRSG 327
             AL   R GG++  +G+      ++ +     +E+ VIG        W   +  L SG
Sbjct: 248 EQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  220 bits (563), Expect = 3e-70
 Identities = 93/289 (32%), Positives = 147/289 (50%), Gaps = 22/289 (7%)

Query: 40  DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 99
           +V VR++A G+CG+D+H  +       +        P+++GHE AG++ EVG  V  ++V
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKL-------PLILGHEGAGVVVEVGPGVTGVKV 53

Query: 100 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS 159
           GDRV + P + CG C LC+                  +G  A  VV PA     LPD +S
Sbjct: 54  GDRVVVLPNLGCGTCELCRE-----LCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLS 108

Query: 160 LEEGAM-CEPLSVGVHACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217
           LEE A+  EPL+   HA RRA  + P   V+++G+G +GL+    A+A GA R+I+TD  
Sbjct: 109 LEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRS 167

Query: 218 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 277
            ++L +A+ LGAD            +    +++   G G DV  D VG  +T++ AL   
Sbjct: 168 DEKLELAKELGADHVIDYKE-----EDLEEELRLTGGGGADVVIDAVGGPETLAQALRLL 222

Query: 278 RPGGKVCLIGLAKTEMTVA-LTPAAAREVDVIGIFRY-RSTWPLCIEFL 324
           RPGG++ ++G       +  L     +E+ +IG     R  +   ++ L
Sbjct: 223 RPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  220 bits (562), Expect = 4e-69
 Identities = 109/336 (32%), Positives = 176/336 (52%), Gaps = 18/336 (5%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP +V +++ A  ICG+DVH ++  + +  R     +K P++ GHE AG + EVG  
Sbjct: 21  PKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSR-----IKPPLIFGHEFAGEVVEVGEG 75

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           V  ++VGD V+ E  I CG C  C+ G+Y++C   +  G   T+G  A  VV P +  +K
Sbjct: 76  VTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWK 134

Query: 154 LPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIII 213
              ++  E  ++ EPL   VH     +V    +V+I G GPIGL+ +  A+A GA  +I 
Sbjct: 135 NDKDIPPEIASIQEPLGNAVHTVLAGDV-SGKSVLITGCGPIGLMAIAVAKAAGASLVIA 193

Query: 214 TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 273
           +D +  RL +A+ +GAD         E+   +V  + +  G+G+DV  +  G  K +   
Sbjct: 194 SDPNPYRLELAKKMGADVVINPR---EEDVVEVKSVTD--GTGVDVVLEMSGNPKAIEQG 248

Query: 274 LNATRPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSGKID 330
           L A  PGG+V ++GL    + + L      + + V GI   +   TW      L+SGK+D
Sbjct: 249 LKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVD 308

Query: 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
           + P+ITH+     ++ E+AFE+  + G   KV+   
Sbjct: 309 LSPVITHKLPL--EDFEEAFEL-MRSGKCGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  218 bits (557), Expect = 2e-68
 Identities = 109/335 (32%), Positives = 172/335 (51%), Gaps = 19/335 (5%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP DV +++K   ICG+DVH +   + +        +  PMV+GHE  G + EVGSE
Sbjct: 21  PEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKT-----IPVPMVVGHEFVGEVVEVGSE 75

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           V   +VGDRV+ E  I CGHC  C+AG  +LC   +  G     G+ A  +V PA   +K
Sbjct: 76  VTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGV-NRPGAFAEYLVIPAFNVWK 134

Query: 154 LPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIII 213
           +PD++  +  A+ +P    VH     ++  E  V+I G+GPIG++    A+  GA  ++I
Sbjct: 135 IPDDIPDDLAAIFDPFGNAVHTALSFDLVGED-VLITGAGPIGIMAAAVAKHVGARHVVI 193

Query: 214 TDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMST 272
           TDV+  RL +AR +GA     V+  D+ DV  ++G     M  G DV  +  G       
Sbjct: 194 TDVNEYRLELARKMGATRAVNVAKEDLRDVMAELG-----MTEGFDVGLEMSGAPSAFRQ 248

Query: 273 ALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF--RYRSTWPLCIEFLRSGKID 330
            L+    GG++ ++G+   +M +       + + + GI+      TW      L+SG +D
Sbjct: 249 MLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LD 307

Query: 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
           + P+ITHRF     + +  FE   + G + KV+ +
Sbjct: 308 LSPIITHRFPID--DFQKGFEA-MRSGQSGKVILD 339

Length = 341

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  203 bits (519), Expect = 8e-63
 Identities = 112/333 (33%), Positives = 178/333 (53%), Gaps = 18/333 (5%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P  GP +V +++ A  ICG+DVH +   + +  R     +K P V+GHE AG +  +G 
Sbjct: 18  VPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR-----IKPPQVVGHEVAGEVVGIGP 72

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
            V+ ++VGD V++E  I CG C  C+ G Y++C   + FG   T+G  A   V PA+  +
Sbjct: 73  GVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIW 131

Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRII 212
           K P ++  E   + EPL   VH      +  ++ V++ G+GPIGL+ +  A+A GA  +I
Sbjct: 132 KNPKSIPPEYATIQEPLGNAVHTVLAGPISGKS-VLVTGAGPIGLMAIAVAKASGAYPVI 190

Query: 213 ITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMST 272
           ++D +  RL +A+ +GA     V+   EDV  +V  +    G G+DV  +  G  K +  
Sbjct: 191 VSDPNEYRLELAKKMGATYV--VNPFKEDVVKEVADL--TDGEGVDVFLEMSGAPKALEQ 246

Query: 273 ALNATRPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSGKI 329
            L A  PGG+V L+GL   ++T+  T     + + + GI       TW      ++SGK+
Sbjct: 247 GLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKL 306

Query: 330 DVKPLITHRFGFTQKEIEDAFEI--SAQGGNAI 360
           D+ P+ITH+F F   + E  FE+  S Q G  I
Sbjct: 307 DLDPIITHKFKF--DKFEKGFELMRSGQTGKVI 337

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  201 bits (513), Expect = 7e-62
 Identities = 108/335 (32%), Positives = 163/335 (48%), Gaps = 22/335 (6%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP +V V++KA G+C SD+H               + K P+ +GHE AG + EVG+ 
Sbjct: 22  PEPGPGEVLVKVKAAGVCHSDLHILDGGVP-------TLTKLPLTLGHEIAGTVVEVGAG 74

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           V + +VGDRVA+   I CG C+LC+ G  NLC      G    +G  A  +V PA+    
Sbjct: 75  VTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVP 133

Query: 154 LPDNVSLEEGA-MCEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRI 211
           +PD V   + A   + +    HA  R   V P   V+++G G +GL  +  A+A GA  +
Sbjct: 134 VPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AV 192

Query: 212 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 271
           I  D+  ++L +A+ LGADE           D+   K    +G G DV FD VG   T  
Sbjct: 193 IAVDIKEEKLELAKELGADEVLNS-----LDDSPKDKKAAGLGGGFDVIFDFVGTQPTFE 247

Query: 272 TALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID 330
            A  A +PGG++ ++GL + ++TV L+   ARE+ +IG F       P  ++ +  GK+D
Sbjct: 248 DAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLD 307

Query: 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
                         EI +  E   +G    +V+  
Sbjct: 308 ---PQVETRPL--DEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  200 bits (511), Expect = 1e-61
 Identities = 114/357 (31%), Positives = 177/357 (49%), Gaps = 27/357 (7%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
            A   G +T++++ + +P  GP +V +R+KA G+CGSD+H++                + 
Sbjct: 3   GAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYY-------HGHRAPAYQG 55

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 136
           ++ GHE AG++  VG  V    VGDRV +   + CG C  C+ G   LC   R       
Sbjct: 56  VIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNR 115

Query: 137 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV----HACRRANVGPETNVMIMGS 192
           +G  A  ++ P K    LPD++S  +GA+   L  G+    HA RR  V     V+++G+
Sbjct: 116 DGGHAEYMLVPEKTLIPLPDDLSFADGAL---LLCGIGTAYHALRRVGVSGRDTVLVVGA 172

Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-STDIEDVDTDVGKIQN 251
           GP+GL  L+ ARA GA  +I  D   +RL +A+ LGAD        D++++         
Sbjct: 173 GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTS---- 228

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
             G+G DV+ +C G       AL A RP G++ L+G               ++  +IG +
Sbjct: 229 --GAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSW 286

Query: 312 RYRSTWPL--CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
            Y S   +  C EFL   K++V  L+THRFG  Q    +A+ + AQ G + KV+F  
Sbjct: 287 -YFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQ--APEAYALFAQ-GESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score =  199 bits (509), Expect = 3e-61
 Identities = 101/328 (30%), Positives = 157/328 (47%), Gaps = 20/328 (6%)

Query: 39  QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 98
               V+I   GICGSD+H+++  K+      NF++K PMV+GHE  G I    S+   L+
Sbjct: 28  NGTLVQITRGGICGSDLHYYQEGKV-----GNFVIKAPMVLGHEVIGKIVH--SDSSGLK 80

Query: 99  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----PPTNGSLAHKVVHPAKLCYKL 154
            G  VA+ P   CGHC  C + + N C  MRFFGS    P  +G      V     C   
Sbjct: 81  EGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPY 140

Query: 155 PDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 214
           P+    +  A  EPL+V +HA  +A       V + G GPIG + + A +  GA  I+  
Sbjct: 141 PEKADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCA 200

Query: 215 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 274
           DV  + LS+AR +GAD+       +   + D+   +   G   DVSF+  G   +++T L
Sbjct: 201 DVSPRSLSLAREMGADKL------VNPQNDDLDHYKAEKGY-FDVSFEVSGHPSSINTCL 253

Query: 275 NATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL 334
             TR  G +  +G+        +     +E+ + G FR+   +   + +L +G I+  PL
Sbjct: 254 EVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPL 313

Query: 335 ITHRFGFTQKEIEDAFEISAQGGNAIKV 362
           ++  + FT   +E+A   +     A KV
Sbjct: 314 LSAEYPFTD--LEEALIFAGDKTQAAKV 339

Length = 343

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  191 bits (487), Expect = 6e-58
 Identities = 102/336 (30%), Positives = 155/336 (46%), Gaps = 26/336 (7%)

Query: 37  GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
           GP D  VR+ A  ICGSD+H          R      K  M++GHE  G + EVGS+VK 
Sbjct: 24  GPHDAIVRVTATSICGSDLH--------IYRGGVPGAKHGMILGHEFVGEVVEVGSDVKR 75

Query: 97  LEVGDRVALEPGISCGHCSLCKAGSYNLC----PEMRFFGSPPTNGSLAHKVVHPA--KL 150
           L+ GDRV++     CG C  C+ G +  C       +       +G  A  V  P     
Sbjct: 76  LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRI--DGGQAEYVRVPYADMN 133

Query: 151 CYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 209
             K+PD +  E+  M  + L  G H    A + P + V ++G+GP+GL  +  AR  GA 
Sbjct: 134 LAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAA 193

Query: 210 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269
           RII  D + +RL +A+  GA +   ++    D+   + ++    G G+D   + VGF++T
Sbjct: 194 RIIAVDSNPERLDLAKEAGATDI--INPKNGDIVEQILELTG--GRGVDCVIEAVGFEET 249

Query: 270 MSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVDV-IGIFRYRSTWPLCIEFLRSG 327
              A+   RPGG +  +G+      + L      + +    G+   R+  P  ++ +  G
Sbjct: 250 FEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEG 309

Query: 328 KIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKV 362
           KID   LITHRF      I  A+ +        IKV
Sbjct: 310 KIDPSKLITHRFPLDD--ILKAYRLFDNKPDGCIKV 343

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  181 bits (461), Expect = 7e-54
 Identities = 105/363 (28%), Positives = 152/363 (41%), Gaps = 48/363 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K L+I+   L      +V VRI A G+C +D H             +     P V+GHE 
Sbjct: 13  KPLEIEEVDLDPPRAGEVLVRITATGVCHTDAH---------TLSGDDPEGFPAVLGHEG 63

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR---FFGSPP----- 135
           AGI+E VG  V S++ GD V L     CG C  C +G  NLC  +R     G+ P     
Sbjct: 64  AGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTR 123

Query: 136 ---TNGSLAH---------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV-----HACRR 178
                  + H           V       K+  +  LE+      L  GV          
Sbjct: 124 LSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKAC---LLGCGVTTGIGAVVNT 180

Query: 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 238
           A V P   V + G G +GL  +  A+A GA RII  D++ ++L +A+  GA         
Sbjct: 181 AKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK-- 238

Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT 298
             +VD  V  I      G D +F+CVG  + M  AL AT  GG   +IG+A     ++  
Sbjct: 239 --EVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTR 296

Query: 299 PA---AAREV--DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 353
           P      R       G  R RS  P  ++   +GK+ +  L+TH      ++I +AF++ 
Sbjct: 297 PFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLM 354

Query: 354 AQG 356
            +G
Sbjct: 355 HEG 357

Length = 366

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  177 bits (452), Expect = 2e-52
 Identities = 109/366 (29%), Positives = 156/366 (42%), Gaps = 48/366 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K L+I+   L   GP +V VRI A G+C SD+H             +     P V+GHE 
Sbjct: 11  KPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT---------GDLPAPLPAVLGHEG 61

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE------MRFFGSPP-- 135
           AG++EEVG  V  ++ GD V L    +CG C  C  G  NLC         +        
Sbjct: 62  AGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRF 121

Query: 136 -----------TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV-----HACRRA 179
                        G+ A   V P     K+ D++ L+  A+   L  GV          A
Sbjct: 122 TADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL---LGCGVTTGVGAVVNTA 178

Query: 180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI 239
            V P   V ++G G +GL  +  AR  GA RII  D   ++L +AR  GA  T  V+   
Sbjct: 179 RVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGA--THTVNASE 236

Query: 240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP 299
           +D    V  + +  G G D +F+ VG   T+  AL  TR GG   ++G+     TV+L  
Sbjct: 237 DDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPA 294

Query: 300 A--AAREVDVIGIF----RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 353
                 E  + G        R   P  ++  R+G++ +  L+T R+     EI +AF   
Sbjct: 295 LELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADM 352

Query: 354 AQGGNA 359
             G NA
Sbjct: 353 LAGENA 358

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  176 bits (449), Expect = 2e-52
 Identities = 102/342 (29%), Positives = 162/342 (47%), Gaps = 47/342 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVI 79
           + L+I+   +P  GP +V ++++A G+C +D+H     + V KL            P++ 
Sbjct: 14  QPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKL------------PLIP 61

Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 138
           GHE  G + EVG  V  L+VGDRV +    ISCG C  C++G+ NLCP  +  G   T+G
Sbjct: 62  GHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDG 120

Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-VGV---HACRRANVGPETNVMIMGSGP 194
             A  VV PA+   K+P+ + L E A   PL   G+    A ++ANV P   V ++G+G 
Sbjct: 121 GYAEYVVVPARYVVKIPEGLDLAEAA---PLLCAGITTYRALKKANVKPGKWVAVVGAGG 177

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
           +G + +  A+A GA  +I      ++L +A+ LGAD           +++       A+ 
Sbjct: 178 LGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHV---------INSSDSDALEAVK 227

Query: 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA--AREVDVIG--I 310
              D   D VG   T+  +L A R GG + L+GL        L       +E+ ++G  +
Sbjct: 228 EIADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLV 286

Query: 311 FRYRSTWPLCIEFLR-SGKIDVKPLITHRFGFTQKEIEDAFE 351
                      E L  + +  +KP I         EI +A+E
Sbjct: 287 GTRADL----EEALDFAAEGKIKPEILETIPLD--EINEAYE 322

Length = 339

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  175 bits (446), Expect = 6e-52
 Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 28/341 (8%)

Query: 34  PTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           P +  P D  V++ A  ICGSD+H ++    ST            V+GHE  G + EVG 
Sbjct: 20  PQIQDPTDAIVKVTAAAICGSDLHIYRGHIPST---------PGFVLGHEFVGEVVEVGP 70

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGSLAHKVVHPA- 148
           EV++L+VGDRV     I+CG C  C+ G    C +   F   GSP  +G+ A  V  P  
Sbjct: 71  EVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFA 130

Query: 149 -KLCYKLPDNVSLEEG-AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 206
                KLPD +S E    + + L  G    +RA V P   V ++G GP+GL  +L+A+  
Sbjct: 131 DGTLLKLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVL 190

Query: 207 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG 265
           GA R+   D   +RL  A  LGA E              V +++ A  G G DV  + VG
Sbjct: 191 GAARVFAVDPVPERLERAAALGA-EPINFED-----AEPVERVREATEGRGADVVLEAVG 244

Query: 266 FDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDV-IGIFRYRSTWPLCIEF 323
               +  A +  RPGG +  +G+   E        A  + + +  G    RS +P  +  
Sbjct: 245 GAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPL 304

Query: 324 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
           L SG++D++ LI HR      E  +A+ +  +    +KV+ 
Sbjct: 305 LESGRLDLEFLIDHRMPLE--EAPEAYRLFDK-RKVLKVVL 342

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  175 bits (445), Expect = 8e-52
 Identities = 103/347 (29%), Positives = 156/347 (44%), Gaps = 36/347 (10%)

Query: 17  AAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH---HFKVKKLSTMRCANFI 72
           AA L    K L+++   +P  GP  V VR+   G+C SD+H         L         
Sbjct: 3   AARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILP-------- 54

Query: 73  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 132
            K P  +GHE AG +EEVGS V  L+ GD V + P   CG C  C+ G  N C   RF G
Sbjct: 55  YKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPG 114

Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-VGV---HACRRAN--VGPETN 186
              T+G  A  ++ P++   KLP  +   E A   PL+  G+   HA ++A   + P + 
Sbjct: 115 I-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAA---PLADAGLTAYHAVKKALPYLDPGST 170

Query: 187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 246
           V+++G G +G + +   RA     +I  D   + L +A  LGAD    V    +DV  +V
Sbjct: 171 VVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADH---VLNASDDVVEEV 227

Query: 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVD 306
            ++    G G D   D VG D+T++ A      GG+  ++G       +  +     E+ 
Sbjct: 228 RELTG--GRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGG-HGRLPTSDLVPTEIS 284

Query: 307 VIGIF--RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
           VIG           + +    SGK+  K  IT    F  ++  +A +
Sbjct: 285 VIGSLWGTRAELVEV-VALAESGKV--KVEITK---FPLEDANEALD 325

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  174 bits (444), Expect = 1e-51
 Identities = 102/338 (30%), Positives = 175/338 (51%), Gaps = 18/338 (5%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKL---STMRCANFIVKKPMVIGHECAGIIEEV 90
           P  GP ++ V+++A GIC  D+  +           +     VK PM+ GHE  G + E+
Sbjct: 20  PRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPP--YVKPPMIPGHEFVGRVVEL 77

Query: 91  GSEVKS--LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG-SPPTNGSLAHKVVHP 147
           G   +   ++VGDRV  E  + C +C  C  G Y +C +   +G     NG +A  +  P
Sbjct: 78  GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFP 137

Query: 148 AK-LCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 206
            + + +K+PD++  E+  + EPL+  +HA  RAN+  +  V++ G+GP+GL  + AAR  
Sbjct: 138 KEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLK 197

Query: 207 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG 265
              ++I+ D+  +RL++AR  GAD       +  +VD  V KI+    G G D+  +  G
Sbjct: 198 NPKKLIVLDLKDERLALARKFGADVV----LNPPEVD-VVEKIKELTGGYGCDIYIEATG 252

Query: 266 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR-EVDVIGIFRYRSTWPLCIEFL 324
               +   LN  R  G+     +    +TV  +    R E+DV+G       +P+ I+ +
Sbjct: 253 HPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLI 312

Query: 325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 362
            SG++    ++TH+F    ++ E+AFE+ A+G ++IKV
Sbjct: 313 ASGRLPTDGIVTHQFPL--EDFEEAFELMARGDDSIKV 348

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  174 bits (444), Expect = 2e-51
 Identities = 110/360 (30%), Positives = 162/360 (45%), Gaps = 38/360 (10%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
           L+I+   LP L P  V VR++  G+CGSDVH     +   +         P+++GHE  G
Sbjct: 13  LEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVA-GRRPRVPL-------PIILGHEGVG 64

Query: 86  IIEEVGSEVKS------LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS------ 133
            +  +G  V +      L+VGDRV    G  CG C  C  G    C   + +G       
Sbjct: 65  RVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDD 124

Query: 134 PPTNGSLA-HKVVHPAKLCYKLPDNVSLE--EGAMCEPLSVGVHACRRAN-VGPETNVMI 189
           P  +G  A H  + P     ++PDNV  E    A C  L+  + A  RA  VG    V++
Sbjct: 125 PHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC-ALATVLAALDRAGPVGAGDTVVV 183

Query: 190 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249
            G+GP+GL  + AA+  GA R+I+ D   +RL +AR  GAD T  +  D          +
Sbjct: 184 QGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT--IDIDELPDPQRRAIV 241

Query: 250 QNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA--REVD 306
           ++  G  G DV  +  G    +   L   R GG   L+G      TV L P     + + 
Sbjct: 242 RDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLT 301

Query: 307 VIGIFRYRSTWPL--CIEFLR--SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 362
           +IG+  Y     L   + FL     +     L+THR+    ++I +A E  A+ G A+KV
Sbjct: 302 IIGVHNY-DPSHLYRAVRFLERTQDRFPFAELVTHRYP--LEDINEALE-LAESGTALKV 357

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  173 bits (442), Expect = 7e-51
 Identities = 114/375 (30%), Positives = 167/375 (44%), Gaps = 67/375 (17%)

Query: 38  PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 97
           P D  VR+ A  ICGSD+H +    +  M       KK  ++GHE  G++EEVG EV++L
Sbjct: 25  PTDAIVRVTATAICGSDLHLYH-GYIPGM-------KKGDILGHEFMGVVEEVGPEVRNL 76

Query: 98  EVGDRVALEPGISCGHCSLCKAGSYNLC------PEMR---------FFGSPPTNGSLAH 142
           +VGDRV +   I+CG C  CK G Y+ C       EM           FG     G  A 
Sbjct: 77  KVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAG 136

Query: 143 ------KVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHACRRANVGPETNVMIMGSGPI 195
                 +V       +K+PD++S E+   + + L  G HA   A V P   V + G GP+
Sbjct: 137 GQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPV 196

Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-G 254
           GL    +A+  GA R+I  D   +RL +AR+    ET     + E+VD  V  ++    G
Sbjct: 197 GLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET----INFEEVDDVVEALRELTGG 252

Query: 255 SGIDVSFDCVGFD-------KTMST--------------ALNATRPGGKVCLIGL-AKTE 292
            G DV  D VG +       K                  A+ A R GG V +IG+   T 
Sbjct: 253 RGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTV 312

Query: 293 MTVALTPAAAREVDVIG----IFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 348
               +  A  + + +      + RY    P  +E + SG++D   +ITHR      +  +
Sbjct: 313 NKFPIGAAMNKGLTLRMGQTHVQRY---LPRLLELIESGELDPSFIITHRLPLE--DAPE 367

Query: 349 AFEI-SAQGGNAIKV 362
           A++I   +    IKV
Sbjct: 368 AYKIFDKKEDGCIKV 382

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score =  170 bits (432), Expect = 7e-50
 Identities = 97/347 (27%), Positives = 162/347 (46%), Gaps = 25/347 (7%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECA 84
           +L I+   +P     +V+V++K  GICGSD H +        R  N   K P VIGHE  
Sbjct: 11  SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIY--------RGHNPFAKYPRVIGHEFF 62

Query: 85  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 144
           G+I+ VG  V +  +G+RVA++P ISCGHC  C  G  N+C  +   G    +G  +   
Sbjct: 63  GVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYA 121

Query: 145 VHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA-A 203
           V PAK  +++PD ++ +   M EP ++  +   R     +   +I G+GP+GL  +    
Sbjct: 122 VVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLK 181

Query: 204 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 263
             +    +I+ D   +RL++A+  GAD        I +    +G+     G    +  D 
Sbjct: 182 GVYNVKAVIVADRIDERLALAKESGADWV------INNAQEPLGEALEEKGIKPTLIIDA 235

Query: 264 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR---STWPLC 320
                 +  A+    P  ++ L+G +     +       +E   + IF  R   + +P+ 
Sbjct: 236 ACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKE---LSIFSSRLNANKFPVV 292

Query: 321 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL 366
           I++L  G ID + LITH F F  + + DA E+  +   +  KV+   
Sbjct: 293 IDWLSKGLIDPEKLITHTFDF--QHVADAIELFEKDQRHCCKVLLTF 337

Length = 339

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  165 bits (419), Expect = 7e-48
 Identities = 103/348 (29%), Positives = 163/348 (46%), Gaps = 21/348 (6%)

Query: 22  GIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIG 80
           G   +  +    PT+  P D  V++    ICG+D+H  K    +        V    ++G
Sbjct: 8   GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT--------VTPGRILG 59

Query: 81  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 140
           HE  G++EEVGS V + +VGDRV +    SCG C  C+ G Y+ C    +      +G+ 
Sbjct: 60  HEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQ 119

Query: 141 AH--KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC--RRANVGPETNVMIMGSGPIG 196
           A   ++ H     YKLP+ V  E   M   +    + C      V P   V I+G+GP+G
Sbjct: 120 AEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVG 179

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
           L  LL A+ +   +II+ D+D  RL +A+ LGA  T   +    D    V ++ +  G G
Sbjct: 180 LAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD--GRG 235

Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 316
           +DV  + VG   T         PGG +  +G+    + + L     + + +       +T
Sbjct: 236 VDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNT 295

Query: 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS--AQGGNAIKV 362
            P+ ++ + SGK+D   L+THRF  +  EIE A++    A    A+KV
Sbjct: 296 TPMLLKLVSSGKLDPSKLVTHRFKLS--EIEKAYDTFSAAAKHKALKV 341

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score =  159 bits (405), Expect = 7e-46
 Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 25/338 (7%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFK----VKKLSTMRCANFIVKKPMVIGHECAGIIEE 89
           P  GP  V V++ A GICGSD+H       +   +    +   +   +V+GHE  G + +
Sbjct: 19  PEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGP-SLMDLGADIVLGHEFCGEVVD 77

Query: 90  VGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 148
            G   +  L+VG RV   P + CG  + C  G            SP   G  A  ++   
Sbjct: 78  YGPGTERKLKVGTRVTSLPLLLCGQGASCGIGL-----------SPEAPGGYAEYMLLSE 126

Query: 149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA 208
            L  ++PD +S+E+ A+ EPL+VG+HA RRA + P    +++G GPIGL  + A +A G 
Sbjct: 127 ALLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGV 186

Query: 209 PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI--DVSFDCVGF 266
             I+ +D   +R ++A  +GAD    V     D        + A   G    V F+CVG 
Sbjct: 187 GPIVASDFSPERRALALAMGAD---IVVDPAADSPFAAWAAELARAGGPKPAVIFECVGA 243

Query: 267 DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLR 325
              +   +    PGG++ ++G+      +    A  +E+ +     Y    +   ++ L 
Sbjct: 244 PGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALA 303

Query: 326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
            GK+DV P++T   G     + DAFE      +  K++
Sbjct: 304 EGKVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKIL 339

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  159 bits (405), Expect = 9e-46
 Identities = 110/363 (30%), Positives = 163/363 (44%), Gaps = 49/363 (13%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
           L I+   +P     ++ +R+ A G+C SD+H  K                P V+GHE +G
Sbjct: 13  LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK---------GELPFPPPFVLGHEISG 63

Query: 86  IIEEVGSEVKS---LEVGDRVALEPGISCGHCSLCKAGSYNLCP---------------E 127
            + EVG  V++   L VGDRV     + CG C  C  G  NLC                 
Sbjct: 64  EVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGT 123

Query: 128 MRFFGSPPT------NGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRA 179
            R F            G LA   V PA     LP+++   E A+  C   +    A + A
Sbjct: 124 TRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFT-AYGALKHA 182

Query: 180 N-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 238
             V P   V ++G G +G   +  A+AFGA  II  DV  ++L+ A+ LGA  T  V+  
Sbjct: 183 ADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT--VNAA 240

Query: 239 IEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL 297
            ED    V  I+    G G+DV  + +G  +T   AL+  R GG+  ++GLA    T  +
Sbjct: 241 KEDA---VAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEI 297

Query: 298 --TPAAAREVDVIGIF--RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 353
             T    R + +IG +  R R   P  +    SGK+D + L+TH++    +EI +A+E  
Sbjct: 298 PITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENL 355

Query: 354 AQG 356
            +G
Sbjct: 356 RKG 358

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  159 bits (404), Expect = 1e-45
 Identities = 106/337 (31%), Positives = 159/337 (47%), Gaps = 50/337 (14%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           + L+I+    P   P  V V ++A G+C SD H +        +  +  V  P V GHE 
Sbjct: 11  EPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGW--------QGHDPDVTLPHVPGHEF 62

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNGSLA 141
           AG++ EVG +V    VGDRV +   + CG C  C+AG  N+C       F  P   GS A
Sbjct: 63  AGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHP---GSFA 119

Query: 142 HKV-VHPAKL-CYKLPDNVSLEEGAMCEPLSVGVHACR----------RANVGPETNVMI 189
             V V  A +   +LPD+V     A      +G   CR          +A V P   V +
Sbjct: 120 EYVAVPRADVNLVRLPDDVDFVTAA-----GLG---CRFATAFRALVHQARVKPGEWVAV 171

Query: 190 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249
            G G +GL  ++ A A GA R+I  D+D  +L +AR LGA  T   ++++EDV      +
Sbjct: 172 HGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN-ASEVEDV---AAAV 226

Query: 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL-AKTEMTVALTPA--AAREVD 306
           ++  G G  VS D +G  +T   ++ + R  G+   +GL    E  VAL      ARE++
Sbjct: 227 RDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELE 286

Query: 307 VIGIF-----RYRSTWPLCIEFLRSGKIDVKPLITHR 338
           ++G       RY +     +  + SGK+D +PL+   
Sbjct: 287 IVGSHGMPAHRYDAM----LALIASGKLDPEPLVGRT 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  157 bits (399), Expect = 6e-45
 Identities = 101/367 (27%), Positives = 152/367 (41%), Gaps = 41/367 (11%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
           A  +LGI  +      +P  GP D  VR  A+  C SDVH        T+       +  
Sbjct: 3   AFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVH--------TVWGGAPGERHG 54

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM----RFFG 132
           M++GHE  G++EEVGSEVK  + GDRV +            + G  +    M    +F  
Sbjct: 55  MILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF-- 112

Query: 133 SPPTNGSLAHKVVHP---AKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVM 188
           S   +G  A         A L   LPD ++ E+  M  + +S G H    AN+     V 
Sbjct: 113 SNFKDGVFAEYFHVNDADANL-APLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVA 171

Query: 189 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248
           + G GP+GL+ +  AR  GA RII       R+ +A+  GA +   V     DV   + K
Sbjct: 172 VFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDI--VDYKNGDVVEQILK 229

Query: 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVI 308
           +    G G+D      G   T   AL   +PGG +  +     +  + +     RE   +
Sbjct: 230 LTG--GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPI----PREEWGV 283

Query: 309 GIFRYRSTWPLC----------IEFLRSGKIDVKPLITHRF-GFTQKEIEDAFEISA-QG 356
           G+        LC             +  G++D   L+TH F GF   +IE+A  +   + 
Sbjct: 284 GMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGF--DDIEEALMLMKDKP 341

Query: 357 GNAIKVM 363
            + IK +
Sbjct: 342 DDLIKPV 348

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  157 bits (399), Expect = 6e-45
 Identities = 96/339 (28%), Positives = 145/339 (42%), Gaps = 27/339 (7%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH---------HFKVKKLSTMRCANFIVK 74
           K L+      P     +V V++ A G+C SD+H           K   L         VK
Sbjct: 11  KPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRG-----VK 65

Query: 75  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
            P+V+GHE  G +  VG +   ++VGD+V + P I CG C +C AG  NLC + R  G  
Sbjct: 66  LPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIF 125

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVG-PETNVMIMG 191
             +G  A  V+ P       P  +     A   C  L+    A ++      +  V+I+G
Sbjct: 126 Q-DGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTA-YSAVKKLMPLVADEPVVIIG 183

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +G +GL+ L   +A G   II+ D+D  +L  A+  GAD       +  D D    +I  
Sbjct: 184 AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVV----VNGSDPD-AAKRIIK 238

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
           A G G+D   D V    T S A +    GGK+ L+GL   E T+ L     R + + G +
Sbjct: 239 AAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSY 298

Query: 312 --RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 348
                    L +   ++GK+   PL           ++D
Sbjct: 299 VGSLEELREL-VALAKAGKLKPIPLTERPLSDVNDALDD 336

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  155 bits (393), Expect = 9e-44
 Identities = 97/343 (28%), Positives = 170/343 (49%), Gaps = 19/343 (5%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
           L+++   +P L P ++ +R+KA GICGSD+H ++  K   +     + + P+VIGHE +G
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPG-LTEFPVVIGHEFSG 97

Query: 86  IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVV 145
           ++E+ G  VK+ E GD V  E  + CG C  C++GS N C  ++  G    +G+ A  + 
Sbjct: 98  VVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIA 156

Query: 146 HPAKLCYKLPDNV-------SLEEGAMCEPLSVGVHAC--RRANVGPETNVMIMGSGPIG 196
             A+  +++ +         + E GA+ EP SV  +    R     P   V++ G+GPIG
Sbjct: 157 VNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIG 216

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GS 255
           L  +  A+A GA ++I  ++  +R ++A+ +GAD     +           K+     G 
Sbjct: 217 LAAIALAKAAGASKVIAFEISEERRNLAKEMGADYV--FNPTKMRDCLSGEKVMEVTKGW 274

Query: 256 GIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR 314
           G D+  +  G    T+     +    GK+  IG A T + + L     R   ++G   + 
Sbjct: 275 GADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHS 334

Query: 315 --STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 355
               +P  I+ + SGKID+  +IT RF    + I +A + +++
Sbjct: 335 GHGIFPSVIKLMASGKIDMTKIITARFPL--EGIMEAIKAASE 375

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  154 bits (392), Expect = 1e-43
 Identities = 103/370 (27%), Positives = 154/370 (41%), Gaps = 57/370 (15%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
             ++   L    P +V VRI A GIC +D+          +R        P V+GHE AG
Sbjct: 15  FVLEDVELDDPRPDEVLVRIVATGICHTDLV---------VRDGGLPTPLPAVLGHEGAG 65

Query: 86  IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM--------RFFGSPP-- 135
           ++E VGS V  L+ GD V L    SCG C+ C +G    C           R  GS P  
Sbjct: 66  VVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLS 124

Query: 136 TNG------------SLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA-----CR 177
            +             S A + VVH  +   K+  +V LE  A   PL  G+         
Sbjct: 125 LDDGTPVHGHFFGQSSFATYAVVH-ERNVVKVDKDVPLELLA---PLGCGIQTGAGAVLN 180

Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
                P +++ + G+G +GL  ++AA+  G   II  D+   RL +A+ LGA  T  ++ 
Sbjct: 181 VLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA--THVINP 238

Query: 238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTV 295
             ED+   V  I+   G G+D + D  G    +  A++A  P G + L+G      E+T+
Sbjct: 239 KEEDL---VAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTL 295

Query: 296 ALTPAAAREVDVIGI---FRYRSTW-PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
            +         + G+         + P  IE  R GK     L+T    +  ++I  A  
Sbjct: 296 DVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTF---YPFEDINQAIA 352

Query: 352 ISAQGGNAIK 361
            S   G  IK
Sbjct: 353 DSE-SGKVIK 361

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  153 bits (388), Expect = 2e-43
 Identities = 104/336 (30%), Positives = 157/336 (46%), Gaps = 34/336 (10%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI--VKKPMVIGH 81
           K L+I+    P  GP +V +++KA G+C  D+  +K           F    K P+++GH
Sbjct: 11  KPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWK----------GFFPRGKYPLILGH 60

Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E  G +EEVG  V+  + GDRV L   I CG C  C +G  NLC     +G    +G  A
Sbjct: 61  EIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFA 119

Query: 142 HKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLV 198
             V  P +   KLPDNVS E  A   C  +   VHA +RA V     V++ G  G +G+ 
Sbjct: 120 EYVKVPERSLVKLPDNVSDESAALAAC-VVGTAVHALKRAGVKKGDTVLVTGAGGGVGIH 178

Query: 199 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258
            +  A+A GA  I +T    ++L I + LGAD       D      DV K+      G D
Sbjct: 179 AIQLAKALGARVIAVTRSP-EKLKILKELGAD----YVIDGSKFSEDVKKL-----GGAD 228

Query: 259 VSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIFRY-RST 316
           V  + VG   T+  +L +   GG++ LIG +      +       +E+ +IG     ++ 
Sbjct: 229 VVIELVG-SPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKAD 287

Query: 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 352
               ++ ++ GKI  KP+I        ++I +A E 
Sbjct: 288 VEEALKLVKEGKI--KPVIDRVVSL--EDINEALED 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  152 bits (386), Expect = 3e-43
 Identities = 92/347 (26%), Positives = 140/347 (40%), Gaps = 52/347 (14%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
           G + LK+     P  GP +V VR+KA G+   DV       L     A  +   P + G 
Sbjct: 11  GPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDV-------LVRQGLAPPVRPLPFIPGS 63

Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E AG++  VGS V   +VGDRVA                           G    +G  A
Sbjct: 64  EAAGVVVAVGSGVTGFKVGDRVA-------------------------ALGGVGRDGGYA 98

Query: 142 HKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLV 198
             VV PA     LPD +S EE A      L+  +    RA + P   V++ G +G +G  
Sbjct: 99  EYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSA 158

Query: 199 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258
            +  A+A GA  + +     ++L + + LGAD    ++   ED    V ++    G G+D
Sbjct: 159 AIQLAKALGATVVAVVSSS-EKLELLKELGADHV--INYREEDFVEQVRELTG--GKGVD 213

Query: 259 VSFDCVGFDKTMSTALNATRPGGKVCLIGLA--KTEMTVALTPAAAREVDVIGIFRYRST 316
           V  D VG   T + +L A  PGG++  IG       + + L P   + + + G+      
Sbjct: 214 VVLDTVG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRD 272

Query: 317 WPLCIEF-------LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
                E        L SGK+  KP+I   +   +     A  +  + 
Sbjct: 273 PEALAEALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERR 317

Length = 326

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  150 bits (382), Expect = 1e-42
 Identities = 97/351 (27%), Positives = 151/351 (43%), Gaps = 39/351 (11%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
           A  L G   L+++    P   P +  VR+   GIC +D+  +K                P
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYK----GYYP-------FP 51

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 136
            V GHE  GI+EE       L VG RV  E  I+CG C  C+ G Y  CP     G    
Sbjct: 52  GVPGHEFVGIVEEGPEA--EL-VGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDR 108

Query: 137 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 196
           +G+ A  +  P +  + +PD V  E+    EPL+  +    +  + P   V ++G G +G
Sbjct: 109 DGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLG 168

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
           L+        G P +++     ++L++AR LG       +   ++ +++        G G
Sbjct: 169 LLIAQVLALTG-PDVVLVGRHSEKLALARRLGV-----ETVLPDEAESE--------GGG 214

Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS- 315
            DV  +  G    +  AL   RP G V L        +  LT A   E+ ++G     S 
Sbjct: 215 FDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVG-----SR 269

Query: 316 --TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
              +   +  LR G +DV PLIT  +     E  +AFE +A+ G A+KV+ 
Sbjct: 270 CGPFAPALRLLRKGLVDVDPLITAVYPLE--EALEAFERAAEPG-ALKVLL 317

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  151 bits (382), Expect = 2e-42
 Identities = 95/369 (25%), Positives = 154/369 (41%), Gaps = 57/369 (15%)

Query: 21  LGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIG 80
           L I+ +++ P   P     +V++++ A G+C +D+H    K              P+++G
Sbjct: 13  LSIEEIEVAP---P--KAGEVRIKVVATGVCHTDLHVIDGKL---------PTPLPVILG 58

Query: 81  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR----------- 129
           HE AGI+E +G  V +L+ GD+V    G  CG C  C     NLC + R           
Sbjct: 59  HEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDG 118

Query: 130 -------------FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVH 174
                        F G+     + A   V       K+  +  LE+  +  C   S G  
Sbjct: 119 TSRFTCKGKPIHHFLGT----STFAEYTVVSEISLAKIDPDAPLEKVCLIGCG-FSTGYG 173

Query: 175 AC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA 233
           A    A V P +   + G G +GL  ++  +A GA RII  D++  +   A+ LGA E  
Sbjct: 174 AAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECI 233

Query: 234 KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTE 292
                 + +   V  +      G+D +F+ +G   T+  AL+ATR GG   ++ G+  + 
Sbjct: 234 NPRDQDKPI---VEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG 290

Query: 293 MTVALTPAAARE-----VDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIE 347
               L P            V G ++ + + P  +   R  K  +  LITH   F  +EI 
Sbjct: 291 TEATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEIN 348

Query: 348 DAFEISAQG 356
           D F++   G
Sbjct: 349 DGFDLMRSG 357

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  147 bits (373), Expect = 1e-41
 Identities = 91/338 (26%), Positives = 141/338 (41%), Gaps = 48/338 (14%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
            PT GP  V VR++  G+CGSD+  F   +   +  A     +P   GHE  G +  +G 
Sbjct: 14  RPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPA-----EPGGPGHEGWGRVVALGP 68

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
            V+ L VGDRVA   G                             G+ A   +  A    
Sbjct: 69  GVRGLAVGDRVAGLSG-----------------------------GAFAEYDLADADHAV 99

Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRII 212
            LP      +    EPL   ++  RR  +     V ++G+G IGL+ L  A A GA R+I
Sbjct: 100 PLPSL-LDGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVI 158

Query: 213 ITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMST 272
             D    RL++AR LGA E   V+ D E +   V ++    G+G DV  + VG    +  
Sbjct: 159 AIDRRPARLALARELGATEV--VTDDSEAIVERVRELTG--GAGADVVIEAVGHQWPLDL 214

Query: 273 ALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGI-FR----YRSTWPLCIEFLRS 326
           A       G++ + G  +     V       + +D+I    R            ++ +  
Sbjct: 215 AGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIAD 274

Query: 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA-IKVM 363
           G++D+  L+TH F    +E+ DAFE + +  +  IK +
Sbjct: 275 GRLDLGSLLTHEFPL--EELGDAFEAARRRPDGFIKGV 310

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  146 bits (371), Expect = 6e-41
 Identities = 98/322 (30%), Positives = 160/322 (49%), Gaps = 36/322 (11%)

Query: 33  LPTL-GPQDVKVRIKALGICGSDVHH-FKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90
           +P +    DV V++ + G+CGSD+   FK         A++    P+ +GHE +G +E V
Sbjct: 19  IPEIKHQDDVLVKVASSGLCGSDIPRIFK-------NGAHYY---PITLGHEFSGYVEAV 68

Query: 91  GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
           GS V  L  GD VA  P + C  C  C  G Y+LC +  F GS    G+  + VV    L
Sbjct: 69  GSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNL 128

Query: 151 CYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPR 210
            + LP ++ +E+GA  EP++VG+HA   A      NV+I+G+G IGL+ +  A A GA  
Sbjct: 129 -FALPTDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKS 187

Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD-----CVG 265
           +   D++ ++L++A++LGA +T          +    +IQ+ +    ++ FD       G
Sbjct: 188 VTAIDINSEKLALAKSLGAMQT------FNSREMSAPQIQSVLR---ELRFDQLILETAG 238

Query: 266 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA---REVDVIGIF-RYRSTWP--- 318
             +T+  A+    P  ++ L+G    ++ +          +E+ VIG +  Y S WP   
Sbjct: 239 VPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQE 298

Query: 319 --LCIEFLRSGKIDVKPLITHR 338
                  L   K+ ++PLI HR
Sbjct: 299 WETASRLLTERKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  147 bits (372), Expect = 8e-41
 Identities = 113/364 (31%), Positives = 162/364 (44%), Gaps = 50/364 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           + L I+   L   GP +V V+I A G+C SD        LS +   +     PM +GHE 
Sbjct: 19  RPLVIEEVELDPPGPGEVLVKIAAAGLCHSD--------LSVIN-GDRPRPLPMALGHEA 69

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP----------------E 127
           AG++ EVG  V  LEVGD V L    SCGHC  C  G   LC                  
Sbjct: 70  AGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRR 129

Query: 128 MRFFGSPPTN----GSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHAC-RRAN 180
           +R  G    +     + A   V   +   K+  +V LE  A+  C  L+ GV A    A 
Sbjct: 130 LRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLT-GVGAVVNTAG 188

Query: 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 240
           V P  +V ++G G +GL  LL A A GA +++  D++  +L++AR LGA  TA V+    
Sbjct: 189 VRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGA--TATVNAGDP 246

Query: 241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA 300
           +    V +++   G G+D +F+  G    + TA   TR GG     GL   E  +++   
Sbjct: 247 NA---VEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPAL 303

Query: 301 --AAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 352
              A E  + G   Y      R   P  +    SG++ V  L+THR      EI + F+ 
Sbjct: 304 SLVAEERTLKG--SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDR 359

Query: 353 SAQG 356
            A G
Sbjct: 360 LAAG 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  145 bits (369), Expect = 1e-40
 Identities = 84/298 (28%), Positives = 125/298 (41%), Gaps = 62/298 (20%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
             L+   +    LGP DV ++I   G+C SD+H        T+R      K P+V GHE 
Sbjct: 10  GKLEPFTFERRPLGPDDVDIKITYCGVCHSDLH--------TLRNEWGPTKYPLVPGHEI 61

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSP---- 134
            GI+  VGS+V   +VGDRV    G+     SCG C  CK+G    CP+     +     
Sbjct: 62  VGIVVAVGSKVTKFKVGDRV----GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPD 117

Query: 135 --PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVGPE 184
              T G  A  +V   +  +K+P+ +     A  +C       PL       +R  VGP 
Sbjct: 118 GTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-------KRNGVGPG 170

Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-------ARNLGADETAKVST 237
             V ++G G +G + +  A+A GA        +V   S        A  LGADE    + 
Sbjct: 171 KRVGVVGIGGLGHLAVKFAKALGA--------EVTAFSRSPSKKEDALKLGADEFI-ATK 221

Query: 238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 295
           D E +    G         +D+  D V     +   L+  +PGG + L+G  +  + V
Sbjct: 222 DPEAMKKAAGS--------LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPV 271

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  143 bits (363), Expect = 6e-40
 Identities = 90/295 (30%), Positives = 129/295 (43%), Gaps = 34/295 (11%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
             L+ +   +P  GP +V ++I+A G+C +D+H                 K P+V GHE 
Sbjct: 10  GPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLH--------AAEGDWGGSKYPLVPGHEI 61

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSPPTNG 138
            G + EVG+ V+  +VGDRV    G+     SCG C  C+ G  NLC +    G   T G
Sbjct: 62  VGEVVEVGAGVEGRKVGDRV----GVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQG 116

Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIG 196
             A  +V  A+    LPD + L + A  +C  ++V   A R A   P   V ++G G +G
Sbjct: 117 GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITV-YSALRDAGPRPGERVAVLGIGGLG 175

Query: 197 LVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
            + +  ARA G   + IT   D + L  AR LGADE                  Q A G 
Sbjct: 176 HLAVQYARAMGFETVAITRSPDKREL--ARKLGADEVV--------DSGAELDEQAAAG- 224

Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL-AKTEMTVALTPAAAREVDVIG 309
           G DV    V        AL   R GG++ L+GL      +  + P   +   + G
Sbjct: 225 GADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAG 279

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  135 bits (341), Expect = 3e-39
 Identities = 53/117 (45%), Positives = 70/117 (59%), Gaps = 9/117 (7%)

Query: 38  PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 97
           P +V VR+KA GICGSD+H ++ +           VK P+++GHE AGI+EEVG  V  L
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGE--------PPPVKLPLILGHEGAGIVEEVGPGVTGL 52

Query: 98  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 154
           +VGDRV + P I CG C+ C+ G  NLCP  +F G    +G  A  VV PA+    L
Sbjct: 53  KVGDRVVVYPLIPCGKCAACREGRENLCPNGKFLGV-HLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  139 bits (353), Expect = 2e-38
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 29/338 (8%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIG 80
           G + L+      P  GP +V VR+KA  +   D+           R    I +  P ++G
Sbjct: 11  GPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLW--------VRRGMPGIKLPLPHILG 62

Query: 81  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 140
            + AG++E VG  V +++ G RV + PGISCG C  C AG  NLC +    G    +G  
Sbjct: 63  SDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGY 121

Query: 141 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV--HACR-RANVGPETNVMIMG-SGPIG 196
           A  V  PA+    +PDN+S EE A   PL+     H    RA + P   V++ G    +G
Sbjct: 122 AEYVAVPARNLLPIPDNLSFEEAA-AAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVG 180

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
              +  A+ FGA  +I T     +L  A+ LGAD    +    ED   +V ++      G
Sbjct: 181 SAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYV--IDYRKEDFVREVRELTG--KRG 235

Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFR-Y 313
           +DV  + VG   T   +L +   GG++   G A T  E  + L     R++ ++G     
Sbjct: 236 VDVVVEHVG-AATWEKSLKSLARGGRLVTCG-ATTGYEAPIDLRHVFWRQLSILGSTMGT 293

Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
           ++     +  +  GK+  KP+I   F    +E  +A  
Sbjct: 294 KAELDEALRLVFRGKL--KPVIDSVFPL--EEAAEAHR 327

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  138 bits (351), Expect = 4e-38
 Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 26/261 (9%)

Query: 38  PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 97
           P D  +R+ A  +CGSD+  ++    +           P  IGHE  G++EEVGSEV S+
Sbjct: 25  PTDAVIRVVATCVCGSDLWPYRGVSPTR---------APAPIGHEFVGVVEEVGSEVTSV 75

Query: 98  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG-SLAHKVVHPAKLCYKLPD 156
           + GD V     IS G C  C+AG    C    F+G+    G     +V        K+P 
Sbjct: 76  KPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPG 135

Query: 157 NVSLEEG------AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPR 210
           + S +E       A+ + +  G HA   A V P + V+++G G +GL  +LAA+  GA R
Sbjct: 136 SPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAER 195

Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDI--EDVDTDVGKIQNAM-GSGIDVSFDCVGFD 267
           II       R ++AR  GA       TDI  E  +  V +++    G G D   +CVG  
Sbjct: 196 IIAMSRHEDRQALAREFGA-------TDIVAERGEEAVARVRELTGGVGADAVLECVGTQ 248

Query: 268 KTMSTALNATRPGGKVCLIGL 288
           ++M  A+   RPGG+V  +G+
Sbjct: 249 ESMEQAIAIARPGGRVGYVGV 269

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  138 bits (349), Expect = 2e-37
 Identities = 91/293 (31%), Positives = 131/293 (44%), Gaps = 43/293 (14%)

Query: 38  PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 97
           P D  VRI    ICGSD+H         M       +  +V+GHE  G +EEVGS V+SL
Sbjct: 25  PTDAIVRITTTAICGSDLH---------MYRGRTGAEPGLVLGHEAMGEVEEVGSAVESL 75

Query: 98  EVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------RFFGSPPTNGSLAHKVVHP- 147
           +VGDRV +   ++CG C  CK G   +C  +          +    P  G  A  +  P 
Sbjct: 76  KVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPY 135

Query: 148 AKL-CYKLPDNVSLEEGAMCEPLS----VGVHACRRANVGPETNVMIMGSGPIGLVTLLA 202
           A     KLPD    +E      LS     G H    A V P   V + G+GP+GL+   +
Sbjct: 136 ADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYS 195

Query: 203 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQNAMGSGIDVSF 261
           A   GA R+ + D   +RL +A ++GA         I+  D D V +I      G+D + 
Sbjct: 196 AILRGASRVYVVDHVPERLDLAESIGA-------IPIDFSDGDPVEQILGLEPGGVDRAV 248

Query: 262 DCVGF-----------DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR 303
           DCVG+           +  ++  +  TRPGG + ++G+   E   A   AA +
Sbjct: 249 DCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQ 301

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  134 bits (339), Expect = 3e-36
 Identities = 100/355 (28%), Positives = 157/355 (44%), Gaps = 51/355 (14%)

Query: 17  AAWLL--GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCAN 70
           AA +   G K  +++   +P  GP +V V+++A G+C +D+H     + VK         
Sbjct: 3   AAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKP-------- 54

Query: 71  FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLC 125
              K P++ GHE AG++  VG  V  L+VGDRV    G+     +CG C  C+ G   LC
Sbjct: 55  ---KLPLIGGHEGAGVVVAVGPGVSGLKVGDRV----GVKWLYDACGKCEYCRTGDETLC 107

Query: 126 PEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGP 183
           P  +  G    +G+ A   +  A+    +PD +S E+ A  +C  ++V   A ++A + P
Sbjct: 108 PNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV-YKALKKAGLKP 165

Query: 184 ETNVMIMGSGPIGLVTLLA---ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 240
              V+I G+G  G +  L    A+A G  R+I  DV  ++L +A+ LGAD    V     
Sbjct: 166 GDWVVISGAG--GGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAF--VDFKKS 220

Query: 241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA 300
           D    V ++    G G                AL+  RPGG +  +GL            
Sbjct: 221 DDVEAVKEL--TGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFD 278

Query: 301 -AAREVDVIGIFRYRSTW---PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
              R + ++G      T       +EF   GK  VKP I        +++ + FE
Sbjct: 279 LVLRGITIVG--SLVGTRQDLQEALEFAARGK--VKPHIQ-VVPL--EDLNEVFE 326

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  130 bits (328), Expect = 2e-34
 Identities = 98/361 (27%), Positives = 152/361 (42%), Gaps = 59/361 (16%)

Query: 38  PQDVKVRIKAL--GICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           P+  +VRIK L   +C +D+   +  K +      F    P+++GHE AGI+E VG  V 
Sbjct: 25  PKANEVRIKMLATSVCHTDILAIEGFKAT-----LF----PVILGHEGAGIVESVGEGVT 75

Query: 96  SLEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGS---PP---------------- 135
           +L+ GD+V +   I  CG CS C++G  NLC + R   S   P                 
Sbjct: 76  NLKPGDKV-IPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFL 134

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIM 190
              + +   V       K+     LE   +   L  G       A   A V P + V + 
Sbjct: 135 GTSTFSQYTVVDENYVAKIDPAAPLEHVCL---LGCGFSTGYGAAWNTAKVEPGSTVAVF 191

Query: 191 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE---TAKVSTDIEDVDTDVG 247
           G G +GL  ++ A+  GA RII  D++  +   A+  GA +          + +V     
Sbjct: 192 GLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEV----- 246

Query: 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP---AAAR 303
            I+   G G+D SF+C G    M+ AL +T+ G G   ++G       +++ P      R
Sbjct: 247 -IREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVG-VPPGAELSIRPFQLILGR 304

Query: 304 EVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIK 361
                  G F+ RS  P  +    + K D+  LITH   F   EI   F++  + G  I+
Sbjct: 305 TWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFE--EINKGFDL-MKSGECIR 361

Query: 362 V 362
            
Sbjct: 362 T 362

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  127 bits (321), Expect = 2e-34
 Identities = 70/318 (22%), Positives = 111/318 (34%), Gaps = 60/318 (18%)

Query: 61  KKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAG 120
             L  +      +  P+  G+   G + EVGS V   + GDRV                 
Sbjct: 6   TALEGLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF---------------- 49

Query: 121 SYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRAN 180
                            G  A +VV PA L   LPD +  E  A+    +  ++  R A 
Sbjct: 50  ---------------CFGPHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAE 94

Query: 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 240
                 V ++G G +GL+    A+A GA  ++  D D  R  +A  LG  +     T  E
Sbjct: 95  PRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADE 154

Query: 241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA 300
                        G G DV  +  G    + TAL   R  G+V L+G    +  +     
Sbjct: 155 I-----------GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEF 203

Query: 301 AAREVDVIG---IFRYRSTWP----------LCIEFLRSGKIDVKPLITHRFGFTQKEIE 347
             + + +         R   P            ++ L  G+++   LITHR  F   +  
Sbjct: 204 HFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFE--DAP 259

Query: 348 DAFE-ISAQGGNAIKVMF 364
           +A+  +       +KV+ 
Sbjct: 260 EAYRLLFEDPPECLKVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  121 bits (305), Expect = 3e-31
 Identities = 100/361 (27%), Positives = 151/361 (41%), Gaps = 75/361 (20%)

Query: 41  VKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 100
           V+++I A G+C +D +        T+  A+     P+++GHE AGI+E VG  V S++ G
Sbjct: 30  VRIKILATGVCHTDAY--------TLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81

Query: 101 DRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGS--------LAH------- 142
           D V       CG C  CK+G  NLC ++R     G  P   S        + H       
Sbjct: 82  DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTF 141

Query: 143 ---KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMGSGP 194
               VV    +  K+     L++  +   L  GV          A V P + V + G G 
Sbjct: 142 SEYTVVAEISVA-KINPEAPLDKVCL---LGCGVTTGYGAVLNTAKVEPGSTVAVFGLGA 197

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET---AKVSTDIEDVDTDVGKIQN 251
           +GL  +  A+A GA RII  D++  +  +A+  GA +          I+ V  ++     
Sbjct: 198 VGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTD--- 254

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPAAAREVDV--- 307
               G+D +F+C+G  K M  AL A   G G   +IG+A          AA +E+     
Sbjct: 255 ---GGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVA----------AAGQEISTRPF 301

Query: 308 ------------IGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 355
                        G ++ RS  P  +E    GKI V   ITH       EI +AF++   
Sbjct: 302 QLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHA 359

Query: 356 G 356
           G
Sbjct: 360 G 360

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  119 bits (300), Expect = 1e-30
 Identities = 101/360 (28%), Positives = 152/360 (42%), Gaps = 62/360 (17%)

Query: 38  PQDVKVRIKAL--GICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           PQ ++VRIK L   +C +DV+ ++ K  +      F    P ++GHE AGI+E VG  V 
Sbjct: 25  PQAMEVRIKILHTSLCHTDVYFWEAKGQT----PLF----PRILGHEAAGIVESVGEGVT 76

Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF---FGSPPTNGS---------LAH- 142
            L+ GD V       C  C  CK+   N+C  +R     G    +G          + H 
Sbjct: 77  DLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHF 136

Query: 143 ---------KVVHP---AKLCYKLP-DNVSLEEGAMCEPLSVGVH-----ACRRANVGPE 184
                     VVH    AK+  + P D V L        LS GV      A   A V   
Sbjct: 137 VGTSTFSEYTVVHVGCVAKINPEAPLDKVCL--------LSCGVSTGLGAAWNVAKVKKG 188

Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 244
           + V I G G +GL     AR  GA RII  D++  +   A+  G  E      + +D D 
Sbjct: 189 STVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEF----VNPKDHDK 244

Query: 245 DVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-- 300
            V ++   M G G+D SF+C G    M +A      G G   L+G+   +   +  P   
Sbjct: 245 PVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL 304

Query: 301 -AAREV--DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 357
              R +   + G ++ ++  P  +E     +++++  ITH   F   EI  AF++  +G 
Sbjct: 305 LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGE 362

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  115 bits (291), Expect = 1e-29
 Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 30/270 (11%)

Query: 16  MAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI 72
           M A +    GI+ LK++    P  GP +V +R+K  G+   D +     K+  M      
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM------ 54

Query: 73  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 132
              P + G E AG++EEVG  VK ++ GDRV +   +  G C +C +G+  LC      G
Sbjct: 55  ---PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIG 111

Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV----HACRRANVGPETNVM 188
              +NG  A  +V P K  +K+PD++S E  A    L V      HA + A +GP   V+
Sbjct: 112 V-VSNGGYAEYIVVPEKNLFKIPDSISDELAA---SLPVAALTAYHALKTAGLGPGETVV 167

Query: 189 IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247
           + G SG  G+  +  A+  GA  I ++     R    +  GADE        E V     
Sbjct: 168 VFGASGNTGIFAVQLAKMMGAEVIAVS-----RKDWLKEFGADEVVDYDEVEEKVKEITK 222

Query: 248 K---IQNAMGSGI-DVSFDCVGFDKTMSTA 273
               + N++GS   D+S   +G    + T 
Sbjct: 223 MADVVINSLGSSFWDLSLSVLGRGGRLVTF 252

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  114 bits (288), Expect = 5e-29
 Identities = 100/355 (28%), Positives = 151/355 (42%), Gaps = 57/355 (16%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P  GP +V V I+A G+C +D+H+         R      + P ++GHE AG++E VG 
Sbjct: 21  VPDPGPGEVIVDIQACGVCHTDLHY---------REGGINDEFPFLLGHEAAGVVEAVGE 71

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAG-------SYNLCPEMRFF-GSPPTN----GSL 140
            V  +  GD V L     CG C  CK G       ++N   +M    G+  +     G+ 
Sbjct: 72  GVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAF 131

Query: 141 AHKVVHPAKLCYKL-PDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMGSGP 194
           A K +  A  C K+ P      + A    L  GV      A     V    +V ++G G 
Sbjct: 132 AEKTLVHAGQCTKVDPA----ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGG 187

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
           +G   +  A   GA +II  D+D ++L  AR  GA  T   S    D    +  +    G
Sbjct: 188 VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT--DPVEAIRALTG--G 243

Query: 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR-- 312
            G DV  D VG  +T   A  A    G V L+G+   +MT+ L P     +DV G  R  
Sbjct: 244 FGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLEL-PL----LDVFG--RGG 296

Query: 313 -YRSTW----------PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
             +S+W          P+ ++    G++ +   +T R G     +E+AF+    G
Sbjct: 297 ALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDD--VEEAFDKMHAG 349

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  111 bits (281), Expect = 4e-28
 Identities = 87/295 (29%), Positives = 129/295 (43%), Gaps = 50/295 (16%)

Query: 16  MAAWLL-GIKTLKIQPYHL-----PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA 69
           M A +L     ++  P  L     P  GP +V ++++A G+C +D+H             
Sbjct: 1   MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLH------------- 47

Query: 70  NFIV-------KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGS 121
             IV       K P++ GHE  G +E VG  V    VGDRV +   G +CG C  C++G 
Sbjct: 48  --IVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGR 105

Query: 122 YNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRA 179
            NLC   RF G    +G  A  +V   +  Y +P++   EE A  +C  + +G  A + A
Sbjct: 106 ENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI-IGYRALKLA 163

Query: 180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADETAKVSTD 238
            + P   + + G G    + L  AR  GA     T   + Q L  AR LGAD     S D
Sbjct: 164 GLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQEL--ARELGADWAG-DSDD 220

Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM 293
           +     D         + I   F  VG    +  AL A + GG+V L G+  +++
Sbjct: 221 LPPEPLD---------AAII--FAPVG--ALVPAALRAVKKGGRVVLAGIHMSDI 262

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  111 bits (280), Expect = 9e-28
 Identities = 94/354 (26%), Positives = 146/354 (41%), Gaps = 54/354 (15%)

Query: 38  PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           P+  +VRIK  A GIC SD H    K          +   P+++GHE AGI+E VG  V 
Sbjct: 30  PKAHEVRIKIVATGICRSDDHVVSGK---------LVTPFPVILGHEAAGIVESVGEGVT 80

Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NGSLAHK-- 143
           +++ GD+V       CG C  C     NLC +                    G   H   
Sbjct: 81  TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFL 140

Query: 144 ---------VVHPAKLCYKLPDNVSLEEGAM--CEPLSVGV-HACRRANVGPETNVMIMG 191
                    VV    +  K+     LE+  +  C   S G   A   A V P +   + G
Sbjct: 141 GTSTFSEYTVVDEIAVA-KIDAAAPLEKVCLIGCG-FSTGYGAAVNTAKVTPGSTCAVFG 198

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK---VSTDIEDVDTDVGK 248
            G +GL  ++  +A GA RII  D++  + + A+ LGA E          I++V      
Sbjct: 199 LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEV------ 252

Query: 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTVALTPA---AARE 304
           +      G+D SF+ +G   TM  AL +   G  V +I G+  +   +++ P      R 
Sbjct: 253 LTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRT 312

Query: 305 VD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
               V G ++ + + P  +    + K ++ PLITH   F +  I + F++   G
Sbjct: 313 WKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEK--INEGFDLLRSG 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  109 bits (273), Expect = 6e-27
 Identities = 103/377 (27%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K++   AW  G + LKI+   +      +V VRI A G+C +D          T+  A+ 
Sbjct: 1   KSRAAVAWAAG-QPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAF--------TLSGADP 51

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR-- 129
               P+++GHE AGI+E VG  V S++VGD V       CG C  C +G  NLC  +R  
Sbjct: 52  EGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRET 111

Query: 130 ------------FF--GSPPTN----GSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPL 169
                       F   G P  +     + +   V P     K+     LEE  +  C  +
Sbjct: 112 QGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCG-V 170

Query: 170 SVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 228
           + G+ A    A V     V + G G IGL  +  AR   A RII  D++  +  +A+ LG
Sbjct: 171 TTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLG 230

Query: 229 ADE---TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVC 284
           A +          I++V  ++         G+D SF+C+G    M  AL     G G+  
Sbjct: 231 ATDCVNPNDYDKPIQEVIVEITD------GGVDYSFECIGNVNVMRAALECCHKGWGESI 284

Query: 285 LIGLAKTEMTVALTP---AAAR--EVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF 339
           +IG+A     ++  P      R       G  + R+  P  +E    G+I +   +TH  
Sbjct: 285 IIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTM 344

Query: 340 GFTQKEIEDAFEISAQG 356
               ++I +AF++  +G
Sbjct: 345 PL--EDINEAFDLMHEG 359

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 9e-27
 Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 39/264 (14%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  G  +V +++   G+C  D        L  ++     +K P+++GHE  G +EEVG  
Sbjct: 21  PKPGKDEVVIKVNYAGLCYRD--------LLQLQGFYPRMKYPVILGHEVVGTVEEVGEN 72

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           VK  + GDRVA       G C  C++G    C     +G    +G  A           K
Sbjct: 73  VKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVK 131

Query: 154 LPDNVSLEEGAMCEP--LSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPR 210
           +P NVS +EGA+  P    +     RRA V     V++ G  G +G+  +  A+A GA  
Sbjct: 132 VPPNVS-DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAKV 190

Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDIED--VDT-----DVGKIQNAMGSGIDVSFDC 263
           I +T              ++  AK+ +   D  +       +V KI      G D+  + 
Sbjct: 191 IAVTS-------------SESKAKIVSKYADYVIVGSKFSEEVKKI-----GGADIVIET 232

Query: 264 VGFDKTMSTALNATRPGGKVCLIG 287
           VG   T+  +L +   GGK+  IG
Sbjct: 233 VGTP-TLEESLRSLNMGGKIIQIG 255

Length = 334

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  105 bits (265), Expect = 4e-26
 Identities = 91/359 (25%), Positives = 141/359 (39%), Gaps = 74/359 (20%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           M A  +    G + L++     P  GP +V V++ A G+   D+     K    +  A F
Sbjct: 1   MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDL-----KIREGLLKAAF 55

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
            +  P++ GH+ AG++  VG  V   +VGD V                           F
Sbjct: 56  PLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEV---------------------------F 88

Query: 132 GSPPT--NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV-----GVHACRRANVGPE 184
           G  P    G+ A  VV PA      P N+S EE A   PL+       +       +   
Sbjct: 89  GMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAAL-PLAGLTAWQALF--ELGGLKAG 145

Query: 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIED 241
             V+I G +G +G   +  A+A GA R+I T    +   L   R+LGADE          
Sbjct: 146 QTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAANADFL---RSLGADEV--------- 192

Query: 242 VDTDVGKIQNA-MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA 300
           +D   G  + A    G+D   D VG + T++ +L   +PGG++  I         A   A
Sbjct: 193 IDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSI----AGPPPAEQAA 247

Query: 301 AAREVDVIGIFRYRSTWPL--CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 357
             R V    +F       L    E + +GK+  +P++   F    ++  +A E    G 
Sbjct: 248 KRRGVRAGFVFVEPDGEQLAELAELVEAGKL--RPVVDRVFPL--EDAAEAHERLESGH 302

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  105 bits (264), Expect = 2e-25
 Identities = 104/359 (28%), Positives = 155/359 (43%), Gaps = 59/359 (16%)

Query: 38  PQDVKVRIKAL--GICGSDVHHFKVKKLSTMRCANFIVKK-PMVIGHECAGIIEEVGSEV 94
           PQ ++VRIK L   IC +D        LS  +  N   +  P ++GHE AGI+E VG  V
Sbjct: 33  PQKMEVRIKILYTSICHTD--------LSAWKGENEAQRAYPRILGHEAAGIVESVGEGV 84

Query: 95  KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--------------FGSPPTNGSL 140
           + L+ GD V       CG C  CK    NLC   R               F +      +
Sbjct: 85  EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPI 144

Query: 141 AH----------KVVHPAKLC-YKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPE 184
            H           V+  A  C  K+  N  L++  M   LS GV      A   ANV   
Sbjct: 145 YHFLNTSTFTEYTVLDSA--CVVKIDPNAPLKK--MSL-LSCGVSTGVGAAWNTANVQAG 199

Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 244
           ++V I G G +GL     ARA GA +II  D++ ++    + +G  +      + +D D 
Sbjct: 200 SSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF----INPKDSDK 255

Query: 245 DVGK-IQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPAA- 301
            V + I+   G G+D SF+C G  + +  A  +T  G G   L+G+  T   + L P   
Sbjct: 256 PVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL 315

Query: 302 --AREV--DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
              R +   V G F+ +S  P   +    G +++   ITH   F  ++I +AF++   G
Sbjct: 316 FDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDG 372

Length = 381

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  103 bits (260), Expect = 3e-25
 Identities = 81/281 (28%), Positives = 117/281 (41%), Gaps = 70/281 (24%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI--------- 72
           G + L+ +   +P  GP +V VR  A+G+                   NFI         
Sbjct: 10  GPEVLEYEDVPVPEPGPGEVLVRNTAIGV-------------------NFIDTYFRSGLY 50

Query: 73  -VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
            +  P V+G E AG++E VG  V   +VGDRVA                          +
Sbjct: 51  PLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVA--------------------------Y 84

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMI 189
             PP  G+ A   V PA    KLPD +S E  A  + + L+          V P   V++
Sbjct: 85  AGPP--GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLV 142

Query: 190 MG-SGPIGLVTLLA--ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 246
              +G +GL  LL   A+A GA  +I T    ++  +AR  GAD    ++   ED    V
Sbjct: 143 HAAAGGVGL--LLTQWAKALGA-TVIGTVSSEEKAELARAAGADHV--INYRDEDFVERV 197

Query: 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
            +I    G G+DV +D VG D T   +L++ RP G +   G
Sbjct: 198 REITG--GRGVDVVYDGVGKD-TFEGSLDSLRPRGTLVSFG 235

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 98.2 bits (245), Expect = 6e-25
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
            +GL  +  A+A GA R+I  D   ++L +A+ LGAD    ++   ED    V ++    
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHV--INYRDEDFVERVRELTG-- 56

Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA-LTPAAAREVDVIGIFR 312
           G G+DV  DCVG   T+  AL   RPGG+V ++GL         L     +E+ ++G   
Sbjct: 57  GRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLG 116

Query: 313 Y-RSTWPLCIEFL 324
             R  +   +E L
Sbjct: 117 GGREEFEEALELL 129

Length = 131

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  102 bits (258), Expect = 7e-25
 Identities = 99/364 (27%), Positives = 154/364 (42%), Gaps = 49/364 (13%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA-- 69
           M AW L    G+  LK+    +P  GP +V VR+ A+ +   D+          +     
Sbjct: 1   MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDL---------LILNGRY 51

Query: 70  NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR 129
              VK P++   + AG +  VG  V   +VGDRV   P            G      +  
Sbjct: 52  PPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVV--PTFFPNW----LDGPPTA-EDEA 104

Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA----CRRANVGPET 185
                P +G LA  VV P +   + PD++S EE A   P + G+ A         + P  
Sbjct: 105 SALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAA-TLPCA-GLTAWNALFGLGPLKPGD 162

Query: 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245
            V++ G+G + L  L  A+A GA R+I T    ++L  A+ LGAD      T   D   +
Sbjct: 163 TVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTT-PDWGEE 220

Query: 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAARE 304
           V K+    G G+D   + VG   T++ ++ A  PGG + LIG L+  E  V L P   + 
Sbjct: 221 VLKLTG--GRGVDHVVE-VGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKG 277

Query: 305 VDVIGIF-----RYRSTWPLCIEFLRS-GKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 358
             + GI      ++           R+     ++P+I   F F  +E ++A+     G +
Sbjct: 278 ATLRGIAVGSRAQFE-------AMNRAIEAHRIRPVIDRVFPF--EEAKEAYRYLESGSH 328

Query: 359 AIKV 362
             KV
Sbjct: 329 FGKV 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  103 bits (259), Expect = 8e-25
 Identities = 94/354 (26%), Positives = 151/354 (42%), Gaps = 54/354 (15%)

Query: 40  DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 99
           +V V++ A G+C SD  H     L   R        P++ GHE AG++ +VG  V  ++ 
Sbjct: 28  EVLVKLVASGLCHSD-EHLVTGDLPMPRY-------PILGGHEGAGVVTKVGPGVTGVKP 79

Query: 100 GDRVALEPGISCGHCSLCKAGSYNLCPE--MRFFGSPPTNGSLAHK-------------- 143
           GD V L    +CG C  C  G  NLC        GS  ++G+                  
Sbjct: 80  GDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDVGQMCLLGT 139

Query: 144 -----VVHPAKLCYKLPDNVSLEEGAMCEPLSVGV-----HACRRANVGPETNVMIMGSG 193
                VV  A    K+ D++ L++  +   +  GV      A   A+V P   V++MG G
Sbjct: 140 FSEYTVVPEAS-VVKIDDDIPLDKACL---VGCGVPTGWGSAVNIADVRPGDTVVVMGIG 195

Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
            +G+  +  A   GA ++I  D    +   A   GA         +E+    V ++ N  
Sbjct: 196 GVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF---ASMEEAVQLVRELTN-- 250

Query: 254 GSGIDVSFDCVGFDK--TMSTALNATRPGGKVCLIGLA---KTEMTVALTPAAAREVDVI 308
           G G D +   VG      ++ AL+ATR GG+V + GL      ++ V L      + ++ 
Sbjct: 251 GQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGLGPMADVDVKVNLFELTLLQKELQ 310

Query: 309 G-IF---RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 358
           G +F     R+  P  +E  R+GK+ +  LIT    +T  +I + ++    G N
Sbjct: 311 GTLFGGANPRADIPRLLELYRAGKLKLDELITRT--YTLDQINEGYQDMLDGKN 362

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  102 bits (257), Expect = 9e-25
 Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 80/355 (22%)

Query: 34  PTLGPQD-VKVRIKALGICGSDV------HHFKVKKLSTMRCANFIVKKPMVIGHECAGI 86
           P  G    V++R++A G+   D+      +  K                P V G E AG+
Sbjct: 22  PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPL-------------PFVPGSEVAGV 68

Query: 87  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 146
           +E VG  V   +VGDRV                                  G  A +VV 
Sbjct: 69  VEAVGEGVTGFKVGDRV---------------------------VALTGQ-GGFAEEVVV 100

Query: 147 PAKLCYKLPDNVSLEEGAMCEPLSVGV--HAC-RRANVGPETNVMIMG-SGPIGLVTLLA 202
           PA   + LPD +S EE A   P++ G   HA  RRA + P   V+++G +G +GL  +  
Sbjct: 101 PAAAVFPLPDGLSFEEAA-ALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQL 159

Query: 203 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262
           A+A GA R+I      ++L++AR LGAD    +     D+   V  +    G G+DV +D
Sbjct: 160 AKALGA-RVIAAASSEEKLALARALGADHV--IDYRDPDLRERVKALTG--GRGVDVVYD 214

Query: 263 CVG---FDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIF------- 311
            VG   F+     +L +   GG++ +IG A  E+  +       + + V+G++       
Sbjct: 215 PVGGDVFEA----SLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARR 270

Query: 312 ---RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
                R+      + L  GKI  +P ++  F   Q    +A    A      KV+
Sbjct: 271 EPELLRANLAELFDLLAEGKI--RPHVSAVFPLEQ--AAEALRALADRKATGKVV 321

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  101 bits (255), Expect = 1e-24
 Identities = 95/347 (27%), Positives = 139/347 (40%), Gaps = 66/347 (19%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGHECAGIIEEVG 91
           PT GP +V VR+ A G+   D +         +R   +      P V G + AG++E VG
Sbjct: 23  PTPGPGEVLVRVHASGVNPVDTY---------IRAGAYPGLPPLPYVPGSDGAGVVEAVG 73

Query: 92  SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 151
             V  L+VGDRV L         +L                     G+ A  VV PA   
Sbjct: 74  EGVDGLKVGDRVWL--------TNLGWGRRQ---------------GTAAEYVVVPADQL 110

Query: 152 YKLPDNVSLEEGAMCEPLSVGVHAC-------RRANVGPETNVMIMG-SGPIGLVTLLAA 203
             LPD VS E+GA     ++G+ A         RA       V++ G SG +G   +  A
Sbjct: 111 VPLPDGVSFEQGA-----ALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLA 165

Query: 204 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFD 262
           R  GA R+I T    +   + R  GAD         ED+     +I  A  G G+DV  +
Sbjct: 166 RWAGA-RVIATASSAEGAELVRQAGADAVFNYRA--EDL---ADRILAATAGQGVDVIIE 219

Query: 263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST---WPL 319
            V  +  ++  L+   PGG++ + G      T+ + P  A+E  + G+  Y +T      
Sbjct: 220 -VLANVNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAA 278

Query: 320 CIE----FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 362
             E     L  G +  +P+I   +     E   A E    GG   KV
Sbjct: 279 AAEAIAAGLADGAL--RPVIAREYPLE--EAAAAHEAVESGGAIGKV 321

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  101 bits (255), Expect = 2e-24
 Identities = 84/382 (21%), Positives = 138/382 (36%), Gaps = 77/382 (20%)

Query: 17  AAWLLGIKT--LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK 74
           AA L G     L +    +P  GP +V V++KA+ +   D  H             FI  
Sbjct: 3   AAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQD---------YGFIPS 53

Query: 75  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
            P ++G + AG + EVGS V   +VGDRV        G                    + 
Sbjct: 54  YPAILGCDFAGTVVEVGSGVTRFKVGDRV-------AGFV-------------HGGNPND 93

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA------------MCEPLSVGVHACRRANVG 182
           P NG+    VV  A L  K+PDN+S EE A            + + L + +   + +   
Sbjct: 94  PRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPAS 153

Query: 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
               V+I G S  +G + +  A+  G    +IT    +   + ++LGAD           
Sbjct: 154 KGKPVLIWGGSSSVGTLAIQLAKLAGYK--VITTASPKNFDLVKSLGADAV--------- 202

Query: 242 VD----TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-------- 289
            D      V  I+ A G  +  + DC+   ++      A    G   L+ L         
Sbjct: 203 FDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEP 262

Query: 290 ----KTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 345
               K +  +  T       D      +    P   E L  GK+   P+     G   + 
Sbjct: 263 RKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLP---ELLEEGKLKPHPVRVVEGGL--EG 317

Query: 346 IEDAFEISAQGG-NAIKVMFNL 366
           +++  ++  +G  +  K++  L
Sbjct: 318 VQEGLDLLRKGKVSGEKLVVRL 339

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  101 bits (254), Expect = 2e-24
 Identities = 89/350 (25%), Positives = 128/350 (36%), Gaps = 71/350 (20%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP  V VR+ A G+   D    K+++      A      P ++G + AG++E VG  
Sbjct: 23  PQPGPGQVLVRVHASGVNPLDT---KIRR----GGAAARPPLPAILGCDVAGVVEAVGEG 75

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           V    VGD V    G                       G     GSLA   V  A+L   
Sbjct: 76  VTRFRVGDEVYGCAGG---------------------LGGLQ--GSLAEYAVVDARLLAL 112

Query: 154 LPDNVSLEEGAMCEPLSVGVHA----CRRANVGPETNVMIM-GSGPIGLVTLLAARAFGA 208
            P N+S+ E A   PL VG+ A      RA V     V+I  G+G +G V +  A+A GA
Sbjct: 113 KPANLSMREAA-ALPL-VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA 170

Query: 209 PRIIITDVDVQRLSIARNLGADETAKVSTDIEDV---DTDVGKIQNAMGSGIDVSFDCVG 265
              +      ++ + AR+LGAD        + +     T         G G DV FD VG
Sbjct: 171 --RVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTG--------GRGFDVVFDTVG 220

Query: 266 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF------------RY 313
            + T+  +  A    G+V  I    T     L P + R     G+F             +
Sbjct: 221 GE-TLDASFEAVALYGRVVSILGGATH---DLAPLSFRNATYSGVFTLLPLLTGEGRAHH 276

Query: 314 RSTWPLCIEFLRSGKIDVKPLI-THRFGFTQKEIEDAFEISAQGGNAIKV 362
                     +  G++  +PL+    F     E   A      G    K+
Sbjct: 277 GEILREAARLVERGQL--RPLLDPRTFPLE--EAAAAHARLESGSARGKI 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 96.5 bits (240), Expect = 3e-22
 Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 53/298 (17%)

Query: 41  VKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 100
           V +++    ICGSD H   V+  +T           +V+GHE  G + E G +V+ +++G
Sbjct: 36  VILKVVTTNICGSDQH--MVRGRTT-------APTGLVLGHEITGEVIEKGRDVEFIKIG 86

Query: 101 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL-------------AHKVVHP 147
           D V++   I+CG C  CK G   +C  +    +P   G+              +  V+ P
Sbjct: 87  DIVSVPFNIACGRCRNCKEGHTGVCLNV----NPARAGAAYGYVDMGGWVGGQSEYVMVP 142

Query: 148 AK--LCYKLPD-NVSLEE----GAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 200
                  K PD + +LE+      + +    G H    A VGP + V I G+GP+GL   
Sbjct: 143 YADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAA 202

Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDV 259
            +A+  GA  +I+ D++  RL+ AR+ G  ET  +S D     T   +I+  +G   +D 
Sbjct: 203 ASAQLLGAAVVIVGDLNPARLAQARSFGC-ETVDLSKD----ATLPEQIEQILGEPEVDC 257

Query: 260 SFDCVGFD----------KTMSTALNA----TRPGGKVCLIGLAKTEMTVALTPAAAR 303
           + DCVGF+          +  +T LN+    TR GG + + GL  TE   A+  AA  
Sbjct: 258 AVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKT 315

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 95.4 bits (238), Expect = 4e-22
 Identities = 73/270 (27%), Positives = 110/270 (40%), Gaps = 47/270 (17%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGHEC 83
           L+I+   +P  G  +V +R++A+G+  +D            R   +I     P  +G+E 
Sbjct: 15  LRIEELPVPAPGAGEVLIRVEAIGLNRADA---------MFRRGAYIEPPPLPARLGYEA 65

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
           AG++E VG+ V    VGDRV++ P                              G+ A  
Sbjct: 66  AGVVEAVGAGVTGFAVGDRVSVIP-----------------------AADLGQYGTYAEY 102

Query: 144 VVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC--RRANVGPETNVMIMG-SGPIGLVTL 200
            + PA    KLPD +S  E A      +  +      A + P  +V+I   S  +GL  +
Sbjct: 103 ALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAI 162

Query: 201 LAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258
             A A GA  I  T        L     LGA     + TD ED+  +V +I    G G+D
Sbjct: 163 QIANAAGATVIATTRTSEKRDAL---LALGAAHV--IVTDEEDLVAEVLRITG--GKGVD 215

Query: 259 VSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
           V FD VG     +   +A  PGG + + G 
Sbjct: 216 VVFDPVG-GPQFAKLADALAPGGTLVVYGA 244

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 94.0 bits (235), Expect = 8e-22
 Identities = 96/369 (26%), Positives = 144/369 (39%), Gaps = 84/369 (22%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVI 79
           G + L++     P  GP +V +R+ A G+  +D+           R   +        ++
Sbjct: 11  GPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADL---------LQRQGLYPPPPGASDIL 61

Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
           G E AG++  VG  V   +VGDRV          C+L   G Y                 
Sbjct: 62  GLEVAGVVVAVGPGVTGWKVGDRV----------CALLAGGGY----------------- 94

Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHA-CRRANVGPETNVMIMG--SGPI 195
            A  VV PA     +P+ +SL E A + E          +   +     V+I G  SG +
Sbjct: 95  -AEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASG-V 152

Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
           G   +  A+A GA R+I T    ++L   R LGAD    ++   ED   +V +     G 
Sbjct: 153 GTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVA--INYRTEDFAEEVKEATG--GR 207

Query: 256 GIDVSFDCVG---FDKTMSTALNATRPGGKVCLIGL---AKTEMTVALTPAAAREVDVIG 309
           G+DV  D VG     +     L A  P G++ LIGL   AK E  + L P   + + + G
Sbjct: 208 GVDVILDMVGGDYLARN----LRALAPDGRLVLIGLLGGAKAE--LDLAPLLRKRLTLTG 261

Query: 310 -IFRYRST--------------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
              R RS               WPL      SG+I  +P+I   F     E  +A     
Sbjct: 262 STLRSRSLEEKAALAAAFREHVWPL----FASGRI--RPVIDKVFPLE--EAAEAHRRME 313

Query: 355 QGGNAIKVM 363
              +  K++
Sbjct: 314 SNEHIGKIV 322

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 93.2 bits (232), Expect = 3e-21
 Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 39/335 (11%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           L  L   +  V+++  G+C +D+H   V         +F  K   ++GHE  GI++EVG 
Sbjct: 20  LRPLKHGEALVKMEYCGVCHTDLH---VAN------GDFGDKTGRILGHEGIGIVKEVGP 70

Query: 93  EVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 151
            V SL+VGDRV++      CGHC  C  G   LC  ++  G    +G +A + +  A   
Sbjct: 71  GVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYA 129

Query: 152 YKLPDNVSLEEGAMCEPLSVGV---HACRRANVGPETNVMIMGSGPIG-LVTLLAARAFG 207
            K+P+   L+          GV    A + + + P   + I G+G +G L    A   F 
Sbjct: 130 VKVPEG--LDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFN 187

Query: 208 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD----TDVGKIQNAMGSGI-DVSFD 262
           A ++I  D++  +L++A+ +GAD T   S  +EDV        G    A+ + +   +F+
Sbjct: 188 A-KVIAVDINDDKLALAKEVGADLTIN-SKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFN 245

Query: 263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCI 321
                     A++A R GG+V  +GL    M +++       ++V+G +   R       
Sbjct: 246 ---------QAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAF 296

Query: 322 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
           +F   GK  V P +  R     ++I D F+   QG
Sbjct: 297 QFGAEGK--VVPKVQLR---PLEDINDIFDEMEQG 326

Length = 338

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 93.0 bits (231), Expect = 4e-21
 Identities = 77/285 (27%), Positives = 124/285 (43%), Gaps = 32/285 (11%)

Query: 28  IQPYHLPTL--GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
           + P+H      G +DV V+I   G+C SD+H        T++      + P+V GHE  G
Sbjct: 25  LSPFHFSRRENGDEDVTVKILYCGVCHSDLH--------TIKNEWGFTRYPIVPGHEIVG 76

Query: 86  IIEEVGSEVKSLEVGDRVALEPGI---SCGHCSLCKAGSYNLCPEMRF----FGSPPTN- 137
           I+ ++G  VK  + GDRV +  G+   SC  C  C     N CP+M F     G   T  
Sbjct: 77  IVTKLGKNVKKFKEGDRVGV--GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKN 134

Query: 138 -GSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGP 194
            G  +  +V       + PDN+ L+ GA  +C  ++V           P  ++ + G G 
Sbjct: 135 YGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGG 194

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
           +G V +   +AFG    +I+    +       LGAD           V TD  K++ A+G
Sbjct: 195 LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL--------VSTDPEKMKAAIG 246

Query: 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP 299
           + +D   D V     +   L   +  GK+  +GL +  + + + P
Sbjct: 247 T-MDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFP 290

Length = 360

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 92.3 bits (230), Expect = 4e-21
 Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 41/330 (12%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P  GP +V ++++A G+C SD     VK+   M   ++    P V GHE  G I+ VG 
Sbjct: 20  VPLPGPGEVLIKVEACGVCHSDAF---VKE-GAMPGLSY----PRVPGHEVVGRIDAVGE 71

Query: 93  EVKSLEVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 151
            V   +VGDRV +   G  CG C  C+ G +  C   +  G     G   + +     L 
Sbjct: 72  GVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALA 131

Query: 152 YKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 209
            ++PD++   E A  +C  ++   +A R +   P   V + G G +G + +  A   G  
Sbjct: 132 -RIPDDLDAAEAAPLLCAGVTT-FNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF- 188

Query: 210 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269
           R +       +  +AR LGA         I+    DV +    +G G  +        K 
Sbjct: 189 RTVAISRGSDKADLARKLGAHHY------IDTSKEDVAEALQELG-GAKLILATAPNAKA 241

Query: 270 MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL--------CI 321
           +S  +    P GK+ ++G A   + V+          + G       WP          +
Sbjct: 242 ISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHG-------WPSGTALDSEDTL 294

Query: 322 EFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
           +F  S    V+P++   F   +    +A++
Sbjct: 295 KF--SALHGVRPMV-ETFPLEK--ANEAYD 319

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 92.3 bits (230), Expect = 5e-21
 Identities = 70/294 (23%), Positives = 104/294 (35%), Gaps = 55/294 (18%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP------MVIGHECAGII 87
           P   P +V VR   +G+CG+D                            +V+GHE  G++
Sbjct: 21  PEPTPGEVLVRTLEVGVCGTDRE-----------IVAGEYGTAPPGEDFLVLGHEALGVV 69

Query: 88  EEVGSEVKSLEVGDRVALEPGI---SCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAH 142
           EEVG     L  GD V           G C  C+ G  + C    +   G    +G +  
Sbjct: 70  EEVGDG-SGLSPGDLVV---PTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMRE 125

Query: 143 KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA-------CRRANVGPETNVMIMGSGPI 195
             V   +   K+P +++ + G + EPLSV   A        +R         +++G+GPI
Sbjct: 126 YFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPI 184

Query: 196 GLVTLLAARAFGAPRIII--TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
           GL+  L  R  G    ++   D    +  I   LGA       T + +V           
Sbjct: 185 GLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVG------- 237

Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDV 307
               D+  +  G       AL A  P G V L G           P   RE +V
Sbjct: 238 --EFDLIIEATGVPPLAFEALPALAPNGVVILFG----------VPGGGREFEV 279

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 84/341 (24%), Positives = 127/341 (37%), Gaps = 67/341 (19%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +PT  P +V V++ A  +   D    +      +         P + G + AG +  VGS
Sbjct: 21  IPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLG-----RPFPPIPGMDFAGEVVAVGS 75

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
            V   +VGD V                  +   P           G+LA  VV P     
Sbjct: 76  GVTRFKVGDEV------------------FGRLPPKGG-------GALAEYVVAPESGLA 110

Query: 153 KLPDNVSLEEGAMCEPLSVGVHAC----RRANVGPETNVMIMG-SGPIGLVTLLAARAFG 207
           K P+ VS EE A   P++ G+ A         V P   V+I G SG +G   +  A+A G
Sbjct: 111 KKPEGVSFEEAA-ALPVA-GLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALG 168

Query: 208 APRIIITDVDVQR-LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 266
           A    +T V   R   + R+LGADE   +    ED            G   DV FD VG 
Sbjct: 169 A---HVTGVCSTRNAELVRSLGADEV--IDYTTEDFVALTAG-----GEKYDVIFDAVGN 218

Query: 267 DK-TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCI---- 321
              ++  A  A +PGG+   +G   + + + L          +G    R  + L      
Sbjct: 219 SPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLT----LGGGGRRLKFFLAKPNAE 274

Query: 322 ------EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
                 E +  GK+  KP+I   +    ++  +A+     G
Sbjct: 275 DLEQLAELVEEGKL--KPVIDSVYPL--EDAPEAYRRLKSG 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 90.3 bits (224), Expect = 3e-20
 Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 36/335 (10%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P LG  DV V++   G+C +D+ ++       +R  +     P+ +GHE +G + + G+
Sbjct: 18  IPELGAGDVVVKVAGCGVCHTDLSYY----YMGVRTNH---ALPLALGHEISGRVIQAGA 70

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
              S  +G  V +   I CG C LCK G   +C   +  G+    G  +H VV    LC 
Sbjct: 71  GAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLC- 128

Query: 153 KLPDNVSLEEGAM--------CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 204
            + D   L    +         + ++    A  +A +     V+++G+G +G   +  A+
Sbjct: 129 -VVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAK 187

Query: 205 AFGAPRIIITDVDVQRLSIARNLGADETA----KVSTDIEDVDTDVGKIQNAMGSGIDVS 260
           A GA  + I D+D ++L + +  GAD T     K + +++ +     K +    +G  + 
Sbjct: 188 AMGAAVVAI-DIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKI- 245

Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF-----RYRS 315
           F+C G      +AL+    GG + ++G    +    L+   A     +G +     RY +
Sbjct: 246 FECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPA 305

Query: 316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
              L +     GKI + P +  R      +IE  F
Sbjct: 306 ALDLVL----DGKIQLGPFVERR---PLDQIEHVF 333

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 89.9 bits (223), Expect = 4e-20
 Identities = 77/271 (28%), Positives = 123/271 (45%), Gaps = 28/271 (10%)

Query: 31  YHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90
           Y L   GP+DV +++   GIC +D+H  K    + +  +N+    PMV GHE  G + EV
Sbjct: 27  YTLRKTGPEDVVIKVIYCGICHTDLHQIK----NDLGMSNY----PMVPGHEVVGEVVEV 78

Query: 91  GSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFG-------SPPTNGSLAH 142
           GS+V    VGD V +   +  CG CS CK+     C + R +          PT G  A 
Sbjct: 79  GSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNK-RIWSYNDVYTDGKPTQGGFAS 137

Query: 143 KVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 200
            +V   K   K+P+ ++ E+ A  +C  ++V                 I+G G +G + +
Sbjct: 138 AMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGV 197

Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
             A+A G    +I+  D +R     +LGAD+          V +D  ++Q A  S +D  
Sbjct: 198 KIAKAMGHHVTVISSSDKKREEALEHLGADDYL--------VSSDAAEMQEAADS-LDYI 248

Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKT 291
            D V     +   L+  +  GK+ L+G+  T
Sbjct: 249 IDTVPVFHPLEPYLSLLKLDGKLILMGVINT 279

Length = 357

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 87.7 bits (217), Expect = 3e-19
 Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 58/355 (16%)

Query: 37  GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
            P ++++++ +  +C SD+  ++ + L            P + GHE +GI+E +G  V  
Sbjct: 36  QPLEIRIKVVSTSLCRSDLSAWESQALF-----------PRIFGHEASGIVESIGEGVTE 84

Query: 97  LEVGDRVALEPGISCGHCSLCKAGSYNLCPEM--------------RFF--GSP-----P 135
            E GD V       CG C  C +G  N+C  +              RF   G P      
Sbjct: 85  FEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCA 144

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA-----CRRANVGPETNVMIM 190
            +    + VVH +    K+     L +  +   LS GV A        A+V   ++V+I 
Sbjct: 145 VSSFSEYTVVH-SGCAVKVDPLAPLHKICL---LSCGVAAGLGAAWNVADVSKGSSVVIF 200

Query: 191 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE---TAKVSTDIEDVDTDVG 247
           G G +GL     A+  GA +II  D++ ++   A+  G  +      +S  I+ V     
Sbjct: 201 GLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQV----- 255

Query: 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVA-----LTPAA 301
            I+   G G D SF+CVG     +TAL +   G G    +G+ K +  V+          
Sbjct: 256 -IKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGR 314

Query: 302 AREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
             +  + G ++ +S  P  ++   + +I +   ITH   F   EI  AFE+  +G
Sbjct: 315 TLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREG 367

Length = 378

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 86/360 (23%), Positives = 138/360 (38%), Gaps = 74/360 (20%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM--VIGHEC 83
           L +    LP     +V +R+ A G+   D+           R   +        ++G E 
Sbjct: 15  LVLVEVPLPVPKAGEVLIRVAAAGVNRPDL---------LQRAGKYPPPPGASDILGLEV 65

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
           AG +  VG  V   +VGDRV          C+L   G Y                  A  
Sbjct: 66  AGEVVAVGEGVSRWKVGDRV----------CALVAGGGY------------------AEY 97

Query: 144 VVHPAKLCYKLPDNVSLEEGAMCEP---LSVGVHACRRANVGPETNVMIM-GSGPIGLVT 199
           V  PA     +P+ +SL E A   P    +V  +  +R  +     V+I  G+  IG   
Sbjct: 98  VAVPAGQVLPVPEGLSLVEAAAL-PETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTA 156

Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
           +  A+AFGA R+  T    ++ +    LGAD  A    + + V  +V K +   G G+DV
Sbjct: 157 IQLAKAFGA-RVFTTAGSDEKCAACEALGAD-IAINYREEDFV--EVVKAETG-GKGVDV 211

Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIG-IFRYRST- 316
             D VG    ++  + A    G++  IG     +  + L P  A+ + + G   R R   
Sbjct: 212 ILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVA 270

Query: 317 -------------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
                        WPL    L SG++  +P+I   F    ++   A  +   G +  K++
Sbjct: 271 EKAAIAAELREHVWPL----LASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIV 322

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 80/361 (22%), Positives = 132/361 (36%), Gaps = 70/361 (19%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
             L++    +P  GP +V VR+ A  I  SD+         +    +     P V G+E 
Sbjct: 12  LVLELVSLPIPPPGPGEVLVRMLAAPINPSDLI------TISGAYGSRP-PLPAVPGNEG 64

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
            G++ EVGS V  L VG RV                                  G+    
Sbjct: 65  VGVVVEVGSGVSGLLVGQRVLP----------------------------LGGEGTWQEY 96

Query: 144 VVHPAKLCYKLPDNVSLEEGAMC--EPLSVGVHACRRANVGPETNVMIM---GSGPIG-- 196
           VV PA     +PD++S E+ AM    PL+  +         P  + +I     S  +G  
Sbjct: 97  VVAPADDLIPVPDSISDEQAAMLYINPLTAWL-MLTEYLKLPPGDWVIQNAANSA-VGRM 154

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
           L+ L     F    ++  D  V+ L   + LGADE   + +  ED+   V +     G+G
Sbjct: 155 LIQLAKLLGFKTINVVRRDEQVEEL---KALGADE--VIDSSPEDLAQRVKEATG--GAG 207

Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDV-IGIF---- 311
             ++ D VG +   +    + RPGG +   GL   E       +     D+ +  F    
Sbjct: 208 ARLALDAVGGESA-TRLARSLRPGGTLVNYGLLSGEPVP-FPRSVFIFKDITVRGFWLRQ 265

Query: 312 ----RYRSTWPLC----IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
                 +          I+ + +G +     +  +F    ++ E+A   + Q G   KV+
Sbjct: 266 WLHSATKEAKQETFAEVIKLVEAGVL--TTPVGAKFPL--EDFEEAVAAAEQPGRGGKVL 321

Query: 364 F 364
            
Sbjct: 322 L 322

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 79.9 bits (197), Expect = 5e-17
 Identities = 63/253 (24%), Positives = 99/253 (39%), Gaps = 24/253 (9%)

Query: 78  VIGHECAGIIEEVGSEV------KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           V+GHE  G +  +            L +G RV     + CG C  C+ G    C  +R +
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 132 GSPPTN------GSLAHKVVHPAKL-CYKLPDNV--SLEEGAMCEPLSVGVHACRRANVG 182
           G    +      G  A     PA      +PD++  ++   A C   +V + A   A   
Sbjct: 61  GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV-MAALEAAGDL 119

Query: 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 242
               V+++G+G +GL    AA A GA R++  D    R  +A + GA   A+      +V
Sbjct: 120 KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAE-----PEV 174

Query: 243 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA 302
             +        G G+DV+ +  G    +   L +   GG   L G       VAL P   
Sbjct: 175 LAERQGGLQN-GRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233

Query: 303 --REVDVIGIFRY 313
             R + + G+  Y
Sbjct: 234 VRRWLTIRGVHNY 246

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 79.5 bits (197), Expect = 7e-17
 Identities = 75/347 (21%), Positives = 124/347 (35%), Gaps = 81/347 (23%)

Query: 40  DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 99
           +V+V +KA G+   DV          +     +      +G EC+GI+  VGS V  L+V
Sbjct: 2   EVEVEVKAAGLNFRDV----------LVALGLLPGDETPLGLECSGIVTRVGSGVTGLKV 51

Query: 100 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS 159
           GDRV    G++                           G+ A  V   A+L  K+PD++S
Sbjct: 52  GDRVM---GLA--------------------------PGAFATHVRVDARLVVKIPDSLS 82

Query: 160 LEEGAMCEPLSVGVHAC-------RRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRI 211
            EE A     ++ V            A +    +V+I   +G +G   +  A+  GA  +
Sbjct: 83  FEEAA-----TLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA-EV 136

Query: 212 IIT---DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 268
             T   +   + L   R LG       S+        + +     G G+DV  + +   +
Sbjct: 137 FATVGSEEKREFL---RELGGPVDHIFSSRDLSFADGILRATG--GRGVDVVLNSLS-GE 190

Query: 269 TMSTALNATRPGGKVCLIGLAKT--------EMTVALTPAAAREVDVIGIFRYR-----S 315
            +  +     P G+   + + K          M   L   +   VD+  + R R      
Sbjct: 191 LLRASWRCLAPFGR--FVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRE 248

Query: 316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 362
                +E L +G +  KPL             DAF +   G +  KV
Sbjct: 249 LLREVLELLEAGVL--KPLPPTVVPSA--SEIDAFRLMQSGKHIGKV 291

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 80.0 bits (197), Expect = 8e-17
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 26/206 (12%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI-GHECAGIIEEVG 91
           +P  GP ++ VR++A G+C +D+H  +          +  V +P V  GHE  G +   G
Sbjct: 22  VPRPGPGELLVRVRACGVCRTDLHVSE---------GDLPVHRPRVTPGHEVVGEVAGRG 72

Query: 92  SEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 146
           ++     VGDRV    GI     +CG C  C+ G+ NLCP  R+ G   T+G  A     
Sbjct: 73  ADAGGFAVGDRV----GIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTV 127

Query: 147 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 204
           PA   Y+LP      E A  +C  + +G  A  RA++ P   + + G G    +T   A 
Sbjct: 128 PAAFAYRLPTGYDDVELAPLLCAGI-IGYRALLRASLPPGGRLGLYGFGGSAHLTAQVAL 186

Query: 205 AFGAPRIIIT-DVDVQRLSIARNLGA 229
           A GA   ++T     +RL++A  LGA
Sbjct: 187 AQGATVHVMTRGAAARRLALA--LGA 210

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 70/289 (24%), Positives = 111/289 (38%), Gaps = 69/289 (23%)

Query: 18  AWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF-- 71
           A +L    G+  LK++   LP     +V+VR++A G+  +D+           R   +  
Sbjct: 2   AVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADL---------MARQGLYDS 52

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
             K P V G ECAG +E VG  VK  +VGDRV            L + G Y         
Sbjct: 53  APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVM----------GLTRFGGY--------- 93

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA----CRRANVGPETNV 187
                    A  V  PA   + LPD +S EE A        + A        N+ P  +V
Sbjct: 94  ---------AEVVNVPADQVFPLPDGMSFEEAAAF--PVNYLTAYYALFELGNLRPGQSV 142

Query: 188 MI-MGSGPIGLVTLLAARAFGAPRIIITDVDV------QRLSIARNLGADETAKVSTDIE 240
           ++   +G +GL      +        + +V V       +    +  G        T  +
Sbjct: 143 LVHSAAGGVGLAAGQLCKT-------VPNVTVVGTASASKHEALKENGVTHVIDYRT--Q 193

Query: 241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289
           D   +V KI      G+D+  D +G + T   + +  +P G++ + G A
Sbjct: 194 DYVEEVKKIS---PEGVDIVLDALGGEDT-RKSYDLLKPMGRLVVYGAA 238

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 75.6 bits (186), Expect = 5e-15
 Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 47/258 (18%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM-----RC 68
           +  A  + G   L+++ + LP +   ++ VR+ +  +C S        KL+       + 
Sbjct: 2   KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTW------KLALQGSDHKKV 55

Query: 69  ANFIVKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
            N + K+P+++GHE AG I +VG + +   + G R  ++P +       C   SY     
Sbjct: 56  PNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYP-- 113

Query: 128 MRFFGSPPTNGSLAHKVVHPAKL----CYKLPDNVSLEEGAMCEPLS--VG-VHACRRAN 180
                     G LA   + P ++    C  + +     E ++ EPLS  +G   A     
Sbjct: 114 ----------GGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQ 163

Query: 181 VGPETNVM----------IMGSGPIGLVTLLAARAFGAP----RIIITDVDVQRLSIARN 226
            G   + M          + G+GP+GL+ +    A   P     +++TDV+ +RL+ A+ 
Sbjct: 164 PGEYRHRMGIKPGGNTAILGGAGPMGLMAI--DYAIHGPIGPSLLVVTDVNDERLARAQR 221

Query: 227 LGADETAKVSTDIEDVDT 244
           L   E A    ++  V+ 
Sbjct: 222 LFPPEAASRGIELLYVNP 239

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 75.1 bits (184), Expect = 6e-15
 Identities = 77/302 (25%), Positives = 137/302 (45%), Gaps = 34/302 (11%)

Query: 13  NQNMA-AWLLGIKTLKIQPYHLPTL--GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA 69
           +QN A  W    ++  + P+H      G  DV V+I   G+C SD+H        T++  
Sbjct: 3   DQNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLH--------TIKNH 54

Query: 70  NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM 128
               + P++ GHE  GI  +VG  V   + GDRV +   I SC  C  C     N CP++
Sbjct: 55  WGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKV 114

Query: 129 RF-FGSPPTNGS-----LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRAN 180
            F + S  ++G+      +  +V   +    +PD +  + GA  +C  ++V     +   
Sbjct: 115 VFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV-YSPMKYYG 173

Query: 181 VGPET--NVMIMGSGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADETAKVST 237
           +  E+   + + G G +G + +   +AFG    +I+   + +R +I R LGAD       
Sbjct: 174 MTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR-LGADSFL---- 228

Query: 238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL 297
               V TD  K++ A+G+ +D   D V  +  +    +  +  GK+  +GL +  + + +
Sbjct: 229 ----VTTDSQKMKEAVGT-MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPI 283

Query: 298 TP 299
            P
Sbjct: 284 FP 285

Length = 375

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 84/358 (23%), Positives = 136/358 (37%), Gaps = 94/358 (26%)

Query: 38  PQDVKVRIKALGI----------CGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII 87
           P  V +++ A  +           G  + + K K  S   C    ++ P+ +G +C+G++
Sbjct: 29  PNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQS---CKYSGIEFPLTLGRDCSGVV 85

Query: 88  EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP--TNGSLAHKVV 145
            ++GS VKS E+GD V                           +G+ P  + G+ A  VV
Sbjct: 86  VDIGSGVKSFEIGDEV---------------------------WGAVPPWSQGTHAEYVV 118

Query: 146 HPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC-------RRANVGPET----NVMIMG-SG 193
            P     K P N+S EE A     S+                + P+      V+I+G SG
Sbjct: 119 VPENEVSKKPKNLSHEEAA-----SLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSG 173

Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK-VSTDIEDVDTDVGKIQNA 252
            +G   +   +A+GA   + T      + + ++LGAD+     + D E+  T+ GK    
Sbjct: 174 GVGTFAIQLLKAWGA--HVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGK---- 227

Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG---LAKTE----MTVALTPAAAREV 305
                DV  D VG D     AL   + GG    +    L  T+    +   L  A     
Sbjct: 228 ----FDVILDTVGGDTE-KWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLK 282

Query: 306 DVIGIFRYRST--W------PLCIEFLR----SGKIDVKPLITHRFGFTQKEIEDAFE 351
             +      S   W         ++ L      GKI  KP+I   F F  +E+ +A+E
Sbjct: 283 KNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYE 336

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 72/270 (26%), Positives = 109/270 (40%), Gaps = 50/270 (18%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECA 84
            LK++   +P   P  V +R+KA G+  S++         T +  +  VK P V+G E  
Sbjct: 14  VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIF--------TRQGHSPSVKFPRVLGIEAV 65

Query: 85  GIIEEV-GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM-RFFGSPPTNGSLAH 142
           G +EE  G        G RVA   G                   M R F     +GS A 
Sbjct: 66  GEVEEAPGGT---FTPGQRVATAMG------------------GMGRTF-----DGSYAE 99

Query: 143 KVVHPAKLCYKLPDNVSLEE-GAMCEPLSVGVHACRRA-NVGPETNVMIMG--SGPIGLV 198
             + P +  Y +  ++S  E  A+ E       +  R+  + P   ++I G  S  +GL 
Sbjct: 100 YTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSS-VGLA 158

Query: 199 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258
            L  A+A G   +  T    +R ++ + LGADE   V  D   +   +         G D
Sbjct: 159 ALKLAKALG-ATVTATTRSPERAALLKELGADE---VVIDDGAIAEQLRAA----PGGFD 210

Query: 259 VSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
              + VG   T+  +L   RPGG VC+ GL
Sbjct: 211 KVLELVG-TATLKDSLRHLRPGGIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176199 cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase

 Score = 69.7 bits (171), Expect = 3e-13
 Identities = 85/328 (25%), Positives = 135/328 (41%), Gaps = 45/328 (13%)

Query: 40  DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK-PMVIGHECAGIIEEVGSEVKSLE 98
            V VR   L IC +D  +++       R    + KK PM + HE  GI   V     + +
Sbjct: 27  WVIVRPTYLSICHADQRYYQGN-----RSPEALKKKLPMALIHE--GIGVVVSDPTGTYK 79

Query: 99  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV 158
           VG +V + P        +      N  P  RF  S   +G +   V  P     KLPDNV
Sbjct: 80  VGTKVVMVPNTPVEKDEIIPE---NYLPSSRFRSSG-YDGFMQDYVFLPPDRLVKLPDNV 135

Query: 159 SLEEGAMCEPLSVGVHACRRAN---VGPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIIT 214
             E  A  E +SVGVHA  R           + + G G +G +T L  +  +   ++++ 
Sbjct: 136 DPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVF 195

Query: 215 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 274
               ++L       ADET  +    ED+              +D +F+CVG   + S A+
Sbjct: 196 GKHQEKL--DLFSFADETYLIDDIPEDL-------------AVDHAFECVGGRGSQS-AI 239

Query: 275 NA----TRPGGKVCLIGLAKTEMTVALTPAAARE--VDVIGIFRY-RSTWPLCIEFL-RS 326
           N      RP G + L+G+  +E  V +      E  + ++G  R  R  +   +E L R+
Sbjct: 240 NQIIDYIRPQGTIGLMGV--SEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRN 297

Query: 327 GKI--DVKPLITHRFGFTQ-KEIEDAFE 351
            ++   ++ L+   F      +I  AFE
Sbjct: 298 PEVAEYLRKLVGGVFPVRSINDIHRAFE 325

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 341

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 68.6 bits (169), Expect = 4e-13
 Identities = 76/325 (23%), Positives = 120/325 (36%), Gaps = 100/325 (30%)

Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
             V+G ECAG++  VG  V  L VGDRV    G+                          
Sbjct: 23  EAVLGGECAGVVTRVGPGVTGLAVGDRVM---GL-------------------------- 53

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV------HA-CRRANVGPETNVM 188
             G+ A +VV  A+L   +PD  S EE A     +V V      +A    A + P  +V+
Sbjct: 54  APGAFATRVVTDARLVVPIPDGWSFEEAA-----TVPVVFLTAYYALVDLARLRPGESVL 108

Query: 189 I-MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST---------- 237
           I   +G +G     AA                 + +AR+LGA+  A   +          
Sbjct: 109 IHAAAGGVG----QAA-----------------IQLARHLGAEVFATAGSPEKRDFLRAL 147

Query: 238 --DIEDV----DTD-VGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289
               + +    D     +I  A  G G+DV  + +  +   ++ L    PGG+   + + 
Sbjct: 148 GIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLSGEFLDAS-LRCLAPGGR--FVEIG 204

Query: 290 KTEM----TVALTPAAA----REVDVIGIF----RYRSTWPLCIEFLRSGKIDVKPLITH 337
           K ++     +A+ P         VD+  +     R R      +E    G +  +PL   
Sbjct: 205 KRDIRDNSQLAMAPFRPNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVL--RPLPVT 262

Query: 338 RFGFTQKEIEDAFEISAQGGNAIKV 362
            F  +  + EDAF    QG +  KV
Sbjct: 263 VFPIS--DAEDAFRYMQQGKHIGKV 285

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 68.5 bits (168), Expect = 7e-13
 Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 54/261 (20%)

Query: 16  MAAWLLGIK----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCAN- 70
           M AW+L        L ++   +P  G  +V V++ A G+   D              A  
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWK----------VIAWG 50

Query: 71  FIVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR 129
                 P V G + AG++  VG++V   +VGDRVA        H SL +           
Sbjct: 51  PPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAY-------HASLAR----------- 92

Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNV 187
                   GS A   V  A+    LPD++S EE A   C  L+      ++  +     +
Sbjct: 93  -------GGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTI 145

Query: 188 MIMG-SGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIEDVDT 244
           +I G +G +G   +  A+  G  R+I T    + + +   ++LGAD    +  + EDV  
Sbjct: 146 LITGGAGGVGSFAVQLAKRAGL-RVITTCSKRNFEYV---KSLGADHV--IDYNDEDVCE 199

Query: 245 DVGKIQNAMGSGIDVSFDCVG 265
            + +I    G G+D   D VG
Sbjct: 200 RIKEITG--GRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 12/205 (5%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM-RCANFIVKKPM-VIGHECAGIIEEVG 91
           P LGP +V V + A G+  ++V     + +ST          +P  + G + +GI+  VG
Sbjct: 38  PELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVG 97

Query: 92  SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 151
             VK+ +VGD V +   +  G+      G     P  R +G     GS A   +  A   
Sbjct: 98  EGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQL 157

Query: 152 YKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPETNVMIMG-SGPIGLVTLLAAR 204
              P ++S EE A    L VG  A R         V P  NV+I G SG +G + +  AR
Sbjct: 158 MPKPKHLSWEEAA-AYML-VGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLAR 215

Query: 205 AFGAPRIIITDVDVQRLSIARNLGA 229
           A GA  + +   + ++    R LGA
Sbjct: 216 AAGANPVAVVSSE-EKAEYCRALGA 239

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.5 bits (163), Expect = 3e-12
 Identities = 73/280 (26%), Positives = 105/280 (37%), Gaps = 63/280 (22%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVI 79
           G + LK+    LP     +V V+++A G+  +DV          MR   +  +   P   
Sbjct: 11  GPEVLKVVEADLPEPAAGEVVVKVEASGVSFADV---------QMRRGLYPDQPPLPFTP 61

Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
           G++  G ++ +GS V   EVGDRVA          +L + G                   
Sbjct: 62  GYDLVGRVDALGSGVTGFEVGDRVA----------ALTRVGGN----------------- 94

Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC----RRANVGPETNVMIMG-SGP 194
            A  +   AK    +P+ V   E A+C  L   V A     R A V     V+I G SG 
Sbjct: 95  -AEYINLDAKYLVPVPEGVDAAE-AVCLVL-NYVTAYQMLHRAAKVLTGQRVLIHGASGG 151

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA---DETAKVSTDIEDVDTDVGKIQN 251
           +G   L  A   GA  +  T    +  +  R LGA   D   K   D        G    
Sbjct: 152 VGQALLELALLAGA-EVYGT-ASERNHAALRELGATPIDYRTK---DWLPAMLTPG---- 202

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT 291
               G+DV FD VG + +   +  A  PGG +   G   +
Sbjct: 203 ----GVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSS 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 51/215 (23%), Positives = 79/215 (36%), Gaps = 22/215 (10%)

Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
           P + G +  G +  VG  V +  +G+RV ++P I             +   ++ + GS  
Sbjct: 78  PRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIR--------DPPEDDPADIDYIGS-E 128

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEE-GAMCEPLSVGVHACRRANVGPETNVMIMG-SG 193
            +G  A   V PA+  Y +   +S  E        S   +   RA VG    V++ G SG
Sbjct: 129 RDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASG 188

Query: 194 PIGLVTL-LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
            +G   + LA R       +      + +   R LGAD               +   +  
Sbjct: 189 GVGSALVQLAKRRGAIVIAVAGAAKEEAV---RALGADTVILRDAP------LLADAKAL 239

Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
            G  +DV  D VG        L   RPGG+    G
Sbjct: 240 GGEPVDVVADVVG-GPLFPDLLRLLRPGGRYVTAG 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 63.7 bits (155), Expect = 4e-11
 Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 27/224 (12%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM---VIG 80
           + ++++   +P LGP +V V + A G+  ++V     + +ST        K  +   +IG
Sbjct: 23  QAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLDLPFHIIG 82

Query: 81  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSL-------CKAGSYNLCPEMRFFGS 133
            + +G++  VG  V   +VGD V          C          + G   L  E R +G 
Sbjct: 83  SDASGVVWRVGPGVTRWKVGDEVVA-------SCLQVDLTAPDGRDGDPMLSSEQRIWGY 135

Query: 134 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPETNV 187
               GS A   +         P +++ EE A C  L  G  A R+      A V P  NV
Sbjct: 136 ETNFGSFAEFALVKDYQLMPKPKHLTWEEAA-CPGL-TGATAYRQLVGWNPAAVKPGDNV 193

Query: 188 MIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230
           +I G +G +G      ARA G   + +     ++    R+LGA+
Sbjct: 194 LIWGAAGGLGSYATQLARAGGGNPVAVVS-SPEKAEYCRSLGAE 236

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 59/241 (24%), Positives = 86/241 (35%), Gaps = 39/241 (16%)

Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
           P V G E AG+++ VG  V    +G RV    G                           
Sbjct: 60  PYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGR-------------------------- 93

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC---RRANVGPETNVMIMG- 191
             G  A   V      + +PD + LE       +  G  A      A + P   V++   
Sbjct: 94  AGGGYAELAVADVDSLHPVPDGLDLEAAVAV--VHDGRTALGLLDLATLTPGDVVLVTAA 151

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +G +G + +  A+A GA  +        + ++ R LGAD    V+ D    D      + 
Sbjct: 152 AGGLGSLLVQLAKAAGATVVGAAGGPA-KTALVRALGAD----VAVDYTRPDWPDQVREA 206

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGI 310
             G G+ V  D VG       AL    PGG+    G A  E T +    A  R V V+G+
Sbjct: 207 LGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGL 265

Query: 311 F 311
            
Sbjct: 266 L 266

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 39/153 (25%)

Query: 23  IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK-PMVIGH 81
           +K L +    +P  GP +V ++++A  I  SD        L  ++      K  P+  G 
Sbjct: 15  VKELSLPEPEVPEPGPGEVLIKVEAAPINPSD--------LGFLKGQYGSTKALPVPPGF 66

Query: 82  ECAGIIEEVG-SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 140
           E +G +   G   +    +G RVA              AGSY               G+ 
Sbjct: 67  EGSGTVVAAGGGPLAQSLIGKRVA------------FLAGSY---------------GTY 99

Query: 141 AHKVVHPAKLCYKLPDNVSLEEGAMC--EPLSV 171
           A   V  A+ C  LPD VS E+GA     PL+ 
Sbjct: 100 AEYAVADAQQCLPLPDGVSFEQGASSFVNPLTA 132

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 67/304 (22%), Positives = 110/304 (36%), Gaps = 63/304 (20%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDV----HHFKVKKLSTMRCANFIVKKPM 77
           G+  LKI     P     DV +++ A G+  +D       +     S+            
Sbjct: 12  GVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSS-----------E 60

Query: 78  VIGHECAGIIEEVGSEVKSLEVGDRV-ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 136
           ++G E AG +E+VGS+VK  + GDRV AL PG           G Y              
Sbjct: 61  ILGLEVAGYVEDVGSDVKRFKEGDRVMALLPG-----------GGY-------------- 95

Query: 137 NGSLAHKVVHPAKLCYKLPDNVSLEE-GAMCEPLSVGVHACRR-ANVGPETNVMIM--GS 192
               A   V        +P   + EE  A+ E         ++  +V    +V+I    S
Sbjct: 96  ----AEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS 151

Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           G +G      A  +GA  II T  + +++   + L A        D E     V   +  
Sbjct: 152 G-VGTAAAQLAEKYGAATIITTSSE-EKVDFCKKLAA-IILIRYPDEEGFAPKV--KKLT 206

Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR 312
              G+++  DCVG    +S         GK  + G         +  A   + +++ + R
Sbjct: 207 GEKGVNLVLDCVG-GSYLSETAEVLAVDGKWIVYGF--------MGGAKVEKFNLLPLLR 257

Query: 313 YRST 316
            R++
Sbjct: 258 KRAS 261

Length = 334

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 59/254 (23%), Positives = 96/254 (37%), Gaps = 47/254 (18%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKL-STMRCANFIVKKPMVIGHECAGIIEEVGS 92
              GP +V+++++A  +   D+    V+ L  TM         P   G E +G++  VG 
Sbjct: 3   APPGPGEVRIQVRAFSLNFGDL--LCVRGLYPTMP------PYPFTPGFEASGVVRAVGP 54

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
            V  L VGD V    G                           + G  A  V  P     
Sbjct: 55  HVTRLAVGDEVIAGTG--------------------------ESMGGHATLVTVPEDQVV 88

Query: 153 KLPDNVSLEEGAMCEPLSVG---VHACRRANVGPETNVMIM-GSGPIGLVTLLAARAFGA 208
           + P ++S EE   C    V    + A  RA +    +++I   +G  GL+ +  AR  GA
Sbjct: 89  RKPASLSFEEA--CALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGA 146

Query: 209 PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 268
             I  T     +L   + LG           ED + ++ ++    G G+DV  + +  + 
Sbjct: 147 -EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTG--GRGVDVVINTLSGE- 200

Query: 269 TMSTALNATRPGGK 282
            +   LN   PGG+
Sbjct: 201 AIQKGLNCLAPGGR 214

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 47.4 bits (113), Expect = 7e-07
 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 19/136 (13%)

Query: 227 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286
           LGADE       I+    D    +   G G+DV  D VG + T+  AL A +PGG++  I
Sbjct: 1   LGADEV------IDYTTEDF--EEATAGEGVDVVLDTVGGE-TLLRALLALKPGGRLVSI 51

Query: 287 GLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL-----CIEFLRSGKIDVKPLITHRFGF 341
           G     ++VA   A  R V  + +F               E + +GK+  +P+I   F  
Sbjct: 52  GGPDLLLSVAAK-AGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKL--RPVIDRVFPL 108

Query: 342 TQKEIEDAFEISAQGG 357
              E  +A      G 
Sbjct: 109 E--EAAEAHRYLESGR 122

Length = 129

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 62/235 (26%), Positives = 96/235 (40%), Gaps = 45/235 (19%)

Query: 37  GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK-PMVIGHECAGIIEEVGSEVK 95
              +V+V  KA+GI   D +         +R   +     P  +G E AG++ +VGS VK
Sbjct: 27  AENEVQVENKAIGINYIDTY---------IRSGLYPPPSLPSGLGTEAAGVVSKVGSGVK 77

Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 155
            ++VGDRV           +    G+Y                S  H V  PA     LP
Sbjct: 78  HIKVGDRVVY---------AQSALGAY----------------SSVHNV--PADKAAILP 110

Query: 156 DNVSLEEGAMCEPLSVGVHACRRAN--VGP-ETNVMIMGSGPIGLVTLLAARAFGAPRII 212
           D +S E+ A      + V+   R    + P E  +    +G +GL+    A+A GA ++I
Sbjct: 111 DAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLI 169

Query: 213 ITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD 267
            T    Q+   A+  GA +        E++   V +I    G  + V +D VG D
Sbjct: 170 GTVGSAQKAQRAKKAGAWQVINYRE--ENIVERVKEITG--GKKVRVVYDSVGKD 220

Length = 327

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 60/290 (20%), Positives = 98/290 (33%), Gaps = 61/290 (21%)

Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
           P+V G+E  G + E G +      GDRV +              GS         FG   
Sbjct: 59  PLVPGYESVGRVVEAGPDTGFR-PGDRVFV-------------PGSNCYEDVRGLFGGA- 103

Query: 136 TNGSLAHKVVHPA-KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNV---MIMG 191
                + ++V PA ++C      +    G     L++   A R A  G E  V   +I+G
Sbjct: 104 -----SKRLVTPASRVC-----RLDPALGPQGALLALAATA-RHAVAGAEVKVLPDLIVG 152

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
            G +G +     +A G     + + + +R   A             ++ D + D  +   
Sbjct: 153 HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGA----------TGYEVLDPEKDPRR--- 199

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
                    +D  G    + T +     GG++ L G     +     PA  +E       
Sbjct: 200 ----DYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEAR----L 251

Query: 312 RYRSTWP-----LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
           R  + W         E + SG + +  LITH     Q+   DA E     
Sbjct: 252 RIAAEWQPGDLHAVRELIESGALSLDGLITH-----QRPASDAAEAYMTA 296

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 47.1 bits (113), Expect = 7e-06
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  G +D+ VR++A+ +   D    KV+          +  +P ++G + +G++E VGSE
Sbjct: 26  PVPGGRDLLVRVEAVSVNPVDT---KVRAGGAP-----VPGQPKILGWDASGVVEAVGSE 77

Query: 94  VKSLEVGDRV 103
           V   +VGD V
Sbjct: 78  VTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 65/249 (26%), Positives = 90/249 (36%), Gaps = 50/249 (20%)

Query: 23  IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA-NFIVKKPMVIGH 81
              L+I     PT G  +V VR        S +H+     L T+R    +  + P + G 
Sbjct: 13  ADVLEIGEVPKPTPGAGEVLVRTTL-----SPIHN---HDLWTIRGTYGYKPELPAIGGS 64

Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E  G+++ VG  VK L+VG RVA                                 G+ A
Sbjct: 65  EAVGVVDAVGEGVKGLQVGQRVA-------------------------VAPVH---GTWA 96

Query: 142 HKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGP-ETNVMIMGSGPIG-- 196
              V PA     LPD +S E  A     PLS  +       V P +  +     G +G  
Sbjct: 97  EYFVAPADGLVPLPDGISDEVAAQLIAMPLS-ALMLLDFLGVKPGQWLIQNAAGGAVGKL 155

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
           +  L AAR      ++  D  V  L   R LG      VST+       V +     G+ 
Sbjct: 156 VAMLAAARGINVINLVRRDAGVAEL---RALGIGPV--VSTEQPGWQDKVREAAG--GAP 208

Query: 257 IDVSFDCVG 265
           I V+ D VG
Sbjct: 209 ISVALDSVG 217

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 62/276 (22%), Positives = 97/276 (35%), Gaps = 72/276 (26%)

Query: 27  KIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI 86
            I    +P  GP +V V+ + +GI  SD++    +           VK P   G E  G 
Sbjct: 19  SIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-------VKPPFDCGFEGVGE 71

Query: 87  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 146
           +  VG  V   +VGD VA                               + G+ A   V 
Sbjct: 72  VVAVGEGVTDFKVGDAVAT-----------------------------MSFGAFAEYQVV 102

Query: 147 PAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 206
           PA+    +P+          E L + V     A++  E  V  M SG   LVT   A A 
Sbjct: 103 PARHAVPVPE-------LKPEVLPLLVSGL-TASIALE-EVGEMKSGETVLVT---AAAG 150

Query: 207 GAPRIIITDVDVQRLSIARN-----LGADETAKVSTDI----------EDVDTDVGKIQN 251
           G  +       VQ   +A         +DE A+    +          ED+      ++ 
Sbjct: 151 GTGQFA-----VQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGE---VLKK 202

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
               G+DV ++ VG +    T ++     G++ +IG
Sbjct: 203 EYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIG 237

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 70/313 (22%), Positives = 115/313 (36%), Gaps = 61/313 (19%)

Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
           P V G+E  G + +VGS VKSL+ GD V                               P
Sbjct: 64  PAVGGNEGVGEVVKVGSGVKSLKPGDWVIP---------------------------LRP 96

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR-----ANVGPETNVMIM 190
             G+     V PA    K+P++V  E+ A    LSV      R       + P   V+  
Sbjct: 97  GLGTWRTHAVVPADDLIKVPNDVDPEQAAT---LSVNPCTAYRLLEDFVKLQPGDWVIQN 153

Query: 191 G-SGPIGLVTLLAARAFGAPRIII------TDVDVQRLSIARNLGADETAKVSTDIEDVD 243
           G +  +G   +  A+  G   I +       +   +RL   + LGAD           + 
Sbjct: 154 GANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL---KALGADHVLTEEELRSLLA 210

Query: 244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK-VCLIGLAKTEMTVALTPAAA 302
           T++ K  +A G    ++ +CVG  K+ +       PGG  V   G++   +TV  +    
Sbjct: 211 TELLK--SAPGGRPKLALNCVG-GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIF 267

Query: 303 REVDVIGIF-------RYRSTWPLCIEFL----RSGKIDVKPLITHRFGFTQKEIEDAFE 351
           +++ + G +                +E L    R GK+   P +        +E +DA  
Sbjct: 268 KDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKL-KAPPVEKVTDDPLEEFKDALA 326

Query: 352 ISAQGGNAIKVMF 364
            + +GG   K + 
Sbjct: 327 NALKGGGGGKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 88/370 (23%), Positives = 150/370 (40%), Gaps = 84/370 (22%)

Query: 21  LGIKTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK-KPMV 78
           L I T+K+    LP      ++ V++ A  +   D    K+          F  K K   
Sbjct: 13  LTITTIKL---PLPNCYKDNEIVVKVHAAALNPVD---LKLYNSY-----TFHFKVKEKG 61

Query: 79  IGHECAGIIEEVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 137
           +G + +G+I +VGS V S  +VGD V                G Y        +G     
Sbjct: 62  LGRDYSGVIVKVGSNVASEWKVGDEV---------------CGIY-----PHPYGG---Q 98

Query: 138 GSLAHK-VVHPAKLCYKL---PDNVSLEEGAMCEPLSVG-----VHACRRANVGPETNVM 188
           G+L+   +V P K    +   P+N+SLEE A   PL +G     +    +  +GP++ V+
Sbjct: 99  GTLSQYLLVDPKKDKKSITRKPENISLEEAA-AWPLVLGTAYQILEDLGQ-KLGPDSKVL 156

Query: 189 IMGSG-PIGLVTL-LAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTD 245
           ++G    +G   + LA   +    ++ T    +   + + LGAD      +     +   
Sbjct: 157 VLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSGVKLLKP 215

Query: 246 VGKIQNAMGSG-IDVSFDCVG---FDKTMSTALNATRPGGK-VCLIGLAK---TEMTVAL 297
           V  ++N  G G  D+  DCVG       +++ L      G  V ++G  K    + T   
Sbjct: 216 V--LENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNS 273

Query: 298 TP---AAAREV-DVIGI--FRYR-------STWP-LCIEFLRSGKIDVKPLI--THRFGF 341
                A AR++   +G+  + Y+       + W   C E +  GK  VKP I   + F  
Sbjct: 274 WDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGK--VKPPIDSVYPF-- 329

Query: 342 TQKEIEDAFE 351
             ++ ++AFE
Sbjct: 330 --EDYKEAFE 337

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 60/267 (22%), Positives = 90/267 (33%), Gaps = 81/267 (30%)

Query: 72  IVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMR 129
           +V+  PM+ G + AG +    SE      GD V +   G+   H                
Sbjct: 52  VVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSH---------------- 93

Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG----------AMCEPLSVGVHACRRA 179
                  +G  +     PA     LP+ +SL E           A+       V A  R 
Sbjct: 94  -------DGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALS------VMALERN 140

Query: 180 NVGPETNVMIMGSGPIGLVT------------LLAARAFGAPRIIITDVDVQRLSIARNL 227
            + PE        GP+ LVT            +L+   +    ++ +    +     + L
Sbjct: 141 GLTPE-------DGPV-LVTGATGGVGSLAVAILSKLGY---EVVASTGKAEEEDYLKEL 189

Query: 228 GADETAKVSTDIEDVDTDVGKIQNAMGSGI-DVSFDCVGFDKTMSTALNATRPGGKVCLI 286
           GA E      D ED+    GK    +       + D VG   T++  L   + GG V   
Sbjct: 190 GASEV----IDREDLS-PPGK---PLEKERWAGAVDTVG-GHTLANVLAQLKYGGAVAAC 240

Query: 287 GLA---KTEMTVALTPAAAREVDVIGI 310
           GLA       TV   P   R V ++GI
Sbjct: 241 GLAGGPDLPTTVL--PFILRGVSLLGI 265

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	366
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.98
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.95
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.88
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.72
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.41
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.4
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.3
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.68
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.58
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.39
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.28
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.26
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.23
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.2
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.11
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.0
PLN02494	477	adenosylhomocysteinase	97.82
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.8
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.8
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.8
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.72
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.68
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.63
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.61
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.61
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	97.58
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.57
PRK08324	681	short chain dehydrogenase; Validated	97.56
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.54
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.49
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.48
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.47
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	97.42
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.42
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	97.38
PRK14967	223	putative methyltransferase; Provisional	97.29
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.27
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.23
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.23
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.21
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.16
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.15
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.1
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.09
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.99
PRK05993	277	short chain dehydrogenase; Provisional	96.99
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.98
TIGR00438	188	rrmJ cell division protein FtsJ.	96.91
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.86
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.84
PRK07402	196	precorrin-6B methylase; Provisional	96.79
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.79
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.73
PRK12742	237	oxidoreductase; Provisional	96.72
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.71
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.71
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.69
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	96.68
PRK01581	374	speE spermidine synthase; Validated	96.54
PRK08017	256	oxidoreductase; Provisional	96.52
PRK08317	241	hypothetical protein; Provisional	96.52
PRK04457	262	spermidine synthase; Provisional	96.52
PRK04148	134	hypothetical protein; Provisional	96.51
PRK00811	283	spermidine synthase; Provisional	96.5
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.5
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.46
PRK00536	262	speE spermidine synthase; Provisional	96.42
PRK06182	273	short chain dehydrogenase; Validated	96.38
PRK12828	239	short chain dehydrogenase; Provisional	96.38
PRK05693	274	short chain dehydrogenase; Provisional	96.26
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.24
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.23
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.22
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.22
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.21
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	96.19
PLN03209	576	translocon at the inner envelope of chloroplast su	96.18
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.17
PRK08618	325	ornithine cyclodeaminase; Validated	96.16
PRK11207	197	tellurite resistance protein TehB; Provisional	96.15
PLN03075	296	nicotianamine synthase; Provisional	96.15
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	96.14
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	96.14
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.13
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	96.12
PRK04266	226	fibrillarin; Provisional	96.12
PRK07326	237	short chain dehydrogenase; Provisional	96.1
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	96.1
PLN02823	336	spermine synthase	96.1
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	96.09
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.06
PLN02366	308	spermidine synthase	96.04
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.03
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	96.03
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.03
PLN02233	261	ubiquinone biosynthesis methyltransferase	96.01
PRK06057	255	short chain dehydrogenase; Provisional	95.98
PRK06139	330	short chain dehydrogenase; Provisional	95.96
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.95
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.95
PRK08267	260	short chain dehydrogenase; Provisional	95.91
PLN02244	340	tocopherol O-methyltransferase	95.88
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.87
PRK07060	245	short chain dehydrogenase; Provisional	95.86
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.85
PRK03612	521	spermidine synthase; Provisional	95.8
PRK12939	250	short chain dehydrogenase; Provisional	95.8
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.79
PRK06949	258	short chain dehydrogenase; Provisional	95.78
PRK08265	261	short chain dehydrogenase; Provisional	95.78
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.78
KOG1252	362	consensus Cystathionine beta-synthase and related	95.78
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	95.78
PRK14903	431	16S rRNA methyltransferase B; Provisional	95.76
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.76
PRK05872	296	short chain dehydrogenase; Provisional	95.73
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.72
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.71
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.7
PRK07806	248	short chain dehydrogenase; Provisional	95.7
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.69
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.69
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.69
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.68
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.64
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.62
COG4122	219	Predicted O-methyltransferase [General function pr	95.59
PRK07109	334	short chain dehydrogenase; Provisional	95.59
PRK07831	262	short chain dehydrogenase; Provisional	95.58
PRK14901	434	16S rRNA methyltransferase B; Provisional	95.58
PLN02476	278	O-methyltransferase	95.56
PRK13255	218	thiopurine S-methyltransferase; Reviewed	95.55
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	95.54
PRK07574	385	formate dehydrogenase; Provisional	95.52
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.51
PRK06180	277	short chain dehydrogenase; Provisional	95.49
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.48
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.48
PRK07814	263	short chain dehydrogenase; Provisional	95.48
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.45
PRK08177	225	short chain dehydrogenase; Provisional	95.43
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.42
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.41
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	95.38
PRK09186	256	flagellin modification protein A; Provisional	95.36
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.36
PLN03139	386	formate dehydrogenase; Provisional	95.35
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.33
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.33
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	95.32
PRK05866	293	short chain dehydrogenase; Provisional	95.32
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.32
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.31
PRK14904	445	16S rRNA methyltransferase B; Provisional	95.31
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.28
PRK07774	250	short chain dehydrogenase; Provisional	95.27
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.27
PRK06841	255	short chain dehydrogenase; Provisional	95.26
PRK14902	444	16S rRNA methyltransferase B; Provisional	95.24
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.23
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.21
PRK09072	263	short chain dehydrogenase; Provisional	95.2
PRK08339	263	short chain dehydrogenase; Provisional	95.19
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.16
PRK08703	239	short chain dehydrogenase; Provisional	95.12
PRK07677	252	short chain dehydrogenase; Provisional	95.12
PRK06398	258	aldose dehydrogenase; Validated	95.11
PRK12829	264	short chain dehydrogenase; Provisional	95.09
PRK10901	427	16S rRNA methyltransferase B; Provisional	95.09
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.08
PRK06484	520	short chain dehydrogenase; Validated	95.08
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.08
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.07
PRK08628	258	short chain dehydrogenase; Provisional	95.05
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.03
PRK06953	222	short chain dehydrogenase; Provisional	95.03
PRK07832	272	short chain dehydrogenase; Provisional	95.03
PRK08328	231	hypothetical protein; Provisional	95.0
PRK08862	227	short chain dehydrogenase; Provisional	94.96
PRK08589	272	short chain dehydrogenase; Validated	94.94
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.93
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.92
PRK07340	304	ornithine cyclodeaminase; Validated	94.92
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.9
PRK06483	236	dihydromonapterin reductase; Provisional	94.88
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	94.88
PRK13243	333	glyoxylate reductase; Reviewed	94.88
PRK07904	253	short chain dehydrogenase; Provisional	94.86
PRK07825	273	short chain dehydrogenase; Provisional	94.85
PRK05867	253	short chain dehydrogenase; Provisional	94.85
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.82
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.8
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.79
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.78
PRK06128	300	oxidoreductase; Provisional	94.77
PRK07024	257	short chain dehydrogenase; Provisional	94.75
PTZ00146	293	fibrillarin; Provisional	94.74
PRK06198	260	short chain dehydrogenase; Provisional	94.74
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.73
KOG0725	270	consensus Reductases with broad range of substrate	94.7
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.69
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.68
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	94.68
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	94.67
PRK06500	249	short chain dehydrogenase; Provisional	94.66
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.66
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	94.65
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.65
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.64
PRK06172	253	short chain dehydrogenase; Provisional	94.62
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.61
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.61
PRK07062	265	short chain dehydrogenase; Provisional	94.58
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	94.57
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.57
PRK06196	315	oxidoreductase; Provisional	94.57
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.56
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	94.5
PRK07890	258	short chain dehydrogenase; Provisional	94.48
PLN02253	280	xanthoxin dehydrogenase	94.46
PRK12747	252	short chain dehydrogenase; Provisional	94.46
PLN02780	320	ketoreductase/ oxidoreductase	94.43
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.42
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	94.42
PRK12937	245	short chain dehydrogenase; Provisional	94.4
PRK05884	223	short chain dehydrogenase; Provisional	94.39
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.38
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	94.37
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.37
PRK11933	470	yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF;	94.37
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.36
PLN02490	340	MPBQ/MSBQ methyltransferase	94.34
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.34
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	94.33
PRK07478	254	short chain dehydrogenase; Provisional	94.33
PRK08643	256	acetoin reductase; Validated	94.33
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.32
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.32
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.27
PRK07576	264	short chain dehydrogenase; Provisional	94.27
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	94.27
PRK05717	255	oxidoreductase; Validated	94.25
COG4262	508	Predicted spermidine synthase with an N-terminal m	94.24
PRK06125	259	short chain dehydrogenase; Provisional	94.24
PRK07523	255	gluconate 5-dehydrogenase; Provisional	94.22
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.21
CHL00194	317	ycf39 Ycf39; Provisional	94.21
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	94.19
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.18
KOG1270	282	consensus Methyltransferases [Coenzyme transport a	94.16
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	94.15
PLN02928	347	oxidoreductase family protein	94.13
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.12
PRK12743	256	oxidoreductase; Provisional	94.11
PRK06194	287	hypothetical protein; Provisional	94.11
PRK05134	233	bifunctional 3-demethylubiquinone-9 3-methyltransf	94.09
PF13847	152	Methyltransf_31: Methyltransferase domain; PDB: 3T	94.09
PRK07454	241	short chain dehydrogenase; Provisional	94.08
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.07
PRK06701	290	short chain dehydrogenase; Provisional	94.07
PRK06138	252	short chain dehydrogenase; Provisional	94.06
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.05
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.03
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.0
PRK12335	287	tellurite resistance protein TehB; Provisional	93.99
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	93.99
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	93.99
PRK05875	276	short chain dehydrogenase; Provisional	93.99
PRK06124	256	gluconate 5-dehydrogenase; Provisional	93.98
PLN02336	475	phosphoethanolamine N-methyltransferase	93.97
PRK10538	248	malonic semialdehyde reductase; Provisional	93.97
PRK05562	223	precorrin-2 dehydrogenase; Provisional	93.95
PRK05854	313	short chain dehydrogenase; Provisional	93.95
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	93.94
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.93
PRK08264	238	short chain dehydrogenase; Validated	93.93
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	93.92
KOG3010	261	consensus Methyltransferase [General function pred	93.92
PRK13304	265	L-aspartate dehydrogenase; Reviewed	93.91
PRK09291	257	short chain dehydrogenase; Provisional	93.91
PRK13303	265	L-aspartate dehydrogenase; Provisional	93.9
PRK12746	254	short chain dehydrogenase; Provisional	93.9
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	93.89
PRK08263	275	short chain dehydrogenase; Provisional	93.88
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	93.87
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	93.86
PRK07074	257	short chain dehydrogenase; Provisional	93.85
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	93.84
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	93.84
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	93.83
PRK07035	252	short chain dehydrogenase; Provisional	93.79
PRK07063	260	short chain dehydrogenase; Provisional	93.78
PRK08277	278	D-mannonate oxidoreductase; Provisional	93.77
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	93.75
KOG3201	201	consensus Uncharacterized conserved protein [Funct	93.75
PRK07985	294	oxidoreductase; Provisional	93.74
PRK14968	188	putative methyltransferase; Provisional	93.74
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	93.74
PRK06179	270	short chain dehydrogenase; Provisional	93.74
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	93.73
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	93.73
PRK06141	314	ornithine cyclodeaminase; Validated	93.72
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.71
PRK11579	346	putative oxidoreductase; Provisional	93.71
PRK08226	263	short chain dehydrogenase; Provisional	93.69
PRK08085	254	gluconate 5-dehydrogenase; Provisional	93.69
PRK11761	296	cysM cysteine synthase B; Provisional	93.67
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.67
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.65
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	93.65
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	93.65
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	93.64
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	93.64
PRK06482	276	short chain dehydrogenase; Provisional	93.63
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	93.63
PRK05876	275	short chain dehydrogenase; Provisional	93.63
PRK12480	330	D-lactate dehydrogenase; Provisional	93.61
PLN03013	429	cysteine synthase	93.59
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.59
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	93.59
TIGR00452	314	methyltransferase, putative. Known examples to dat	93.58
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	93.56
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	93.56
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.56
PRK09242	257	tropinone reductase; Provisional	93.55
PRK07411	390	hypothetical protein; Validated	93.54
TIGR00091	194	tRNA (guanine-N(7)-)-methyltransferase. In E. coli	93.53
PRK06720	169	hypothetical protein; Provisional	93.52
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	93.52
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	93.51
PRK10669	558	putative cation:proton antiport protein; Provision	93.51
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	93.49
PRK13256	226	thiopurine S-methyltransferase; Reviewed	93.47
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.46
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	93.46
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	93.43
PRK07067	257	sorbitol dehydrogenase; Provisional	93.43
COG2910	211	Putative NADH-flavin reductase [General function p	93.42
COG0569	225	TrkA K+ transport systems, NAD-binding component [	93.42
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.41
COG0144	355	Sun tRNA and rRNA cytosine-C5-methylases [Translat	93.41
PRK07417	279	arogenate dehydrogenase; Reviewed	93.37
PRK07856	252	short chain dehydrogenase; Provisional	93.35
PRK06181	263	short chain dehydrogenase; Provisional	93.31
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	93.29
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.28
PRK06153	393	hypothetical protein; Provisional	93.25
PRK06101	240	short chain dehydrogenase; Provisional	93.24
PRK07577	234	short chain dehydrogenase; Provisional	93.24
PRK06197	306	short chain dehydrogenase; Provisional	93.24
PRK06114	254	short chain dehydrogenase; Provisional	93.17
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	93.16
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	93.16
PRK09134	258	short chain dehydrogenase; Provisional	93.16
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.16
PLN02256	304	arogenate dehydrogenase	93.12
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	93.11
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	93.11
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	93.11
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	93.11
PRK08223	287	hypothetical protein; Validated	93.06
PRK03659	601	glutathione-regulated potassium-efflux system prot	93.05
TIGR01934	223	MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis	93.05
PRK13403	335	ketol-acid reductoisomerase; Provisional	93.05
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	93.04
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.04
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	93.03
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.0
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.97
PRK08251	248	short chain dehydrogenase; Provisional	92.97
PRK12367	245	short chain dehydrogenase; Provisional	92.96
cd02440	107	AdoMet_MTases S-adenosylmethionine-dependent methy	92.96
TIGR02072	240	BioC biotin biosynthesis protein BioC. This enzyme	92.95
PLN00203	519	glutamyl-tRNA reductase	92.94
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	92.94
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	92.93

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-62  Score=421.97  Aligned_cols=346  Identities=50%  Similarity=0.888  Sum_probs=314.9

Q ss_pred             CcccceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      |.++|+++|+.++.++++++.|+|++ +|+||+|++.++|||.+|++.++     ..+.+.+..+.|+++|||.+|+|++
T Consensus         1 ~~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~-----~G~ig~~v~k~PmvlGHEssGiV~e   75 (354)
T KOG0024|consen    1 MAADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYT-----HGRIGDFVVKKPMVLGHESSGIVEE   75 (354)
T ss_pred             CCcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhc-----cCCcCccccccccccccccccchhh
Confidence            35679999999999999999999988 99999999999999999999988     3344555567899999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhh
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPL  169 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~  169 (366)
                      +|+.|+++++||||++-|..+|+.|.+|+.|++++|+.+.|.+.+..+|++++|++.++++|+|+|+++|++++|++.++
T Consensus        76 vG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePL  155 (354)
T KOG0024|consen   76 VGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPL  155 (354)
T ss_pred             hcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ++++++.+++++++|++|||+|+|++|+.++..||++|+.+|++++..++|++++++||++.+....... . ...++++
T Consensus       156 sV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~-~~~~~~~  233 (354)
T KOG0024|consen  156 SVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-S-PQELAEL  233 (354)
T ss_pred             hhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-c-HHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999876643322 2 2223322


Q ss_pred             H-Hh-hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCC-ChHHHHHHHHC
Q 017793          250 Q-NA-MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS-TWPLCIEFLRS  326 (366)
Q Consensus       250 ~-~~-~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~  326 (366)
                      . .. +...+|++|||+|....++.++..++.+|+++++|+.....+++...+..+.+++.|+..+.+ .|..+++++++
T Consensus       234 v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~s  313 (354)
T KOG0024|consen  234 VEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSS  313 (354)
T ss_pred             HHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHc
Confidence            2 21 235599999999999899999999999999999999999999999999999999999999955 99999999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHHcCCC-ceEEEee
Q 017793          327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN  365 (366)
Q Consensus       327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi~  365 (366)
                      |+++.++++++.|++  ++..+||+.+..++. .-|+++.
T Consensus       314 Gki~~k~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  314 GKIDVKPLITHRYKF--DDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             CCcCchhheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence            999999999999999  999999999888864 4588775

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.1e-62  Score=432.82  Aligned_cols=330  Identities=32%  Similarity=0.519  Sum_probs=297.5

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEEEEE
Q 017793           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGIIEE   89 (366)
Q Consensus        12 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~   89 (366)
                      +++||++++... ++++++++|.|+|+++||+|||+|+|+|++|++.++|         ..+ ..+|+|+|||.+|+|++
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G---------~~~~~~~P~ipGHEivG~V~~   71 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKG---------DWPVPKLPLIPGHEIVGTVVE   71 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcC---------CCCCCCCCccCCcceEEEEEE
Confidence            367999999977 4599999999999999999999999999999999994         333 33799999999999999


Q ss_pred             eCCCCCCCCCCCEEEE-cCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-
Q 017793           90 VGSEVKSLEVGDRVAL-EPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-  167 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-  167 (366)
                      +|++|++|++||||.+ ....+|++|.||+.|+.++|++..+.++ +.+|+|+||+++++++++++|+++++++||.+. 
T Consensus        72 vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllC  150 (339)
T COG1064          72 VGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLC  150 (339)
T ss_pred             ecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhc
Confidence            9999999999999999 7888999999999999999999877776 589999999999999999999999999999885 


Q ss_pred             hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      ...|+|+++++.+++||++|+|.|.|++|++|+|+|+++|+ +|++++++++|.+++++||++.+++..  .+++.+.++
T Consensus       151 aGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~  227 (339)
T COG1064         151 AGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVK  227 (339)
T ss_pred             CeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhH
Confidence            67789999999999999999999999999999999999998 899999999999999999999998854  345555543


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-C-CceeechHhhhcCcEEEEeecc-CCChHHHHHHH
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-T-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFL  324 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  324 (366)
                      +       .+|++||+++ +..++.+++.|+++|+++++|... . ...++...++++++++.|+..+ +.++++++++.
T Consensus       228 ~-------~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~  299 (339)
T COG1064         228 E-------IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFA  299 (339)
T ss_pred             h-------hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHH
Confidence            3       2999999999 889999999999999999999874 3 3456677789999999999987 78999999999


Q ss_pred             HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+|++  .|.+.+.+++  +++++|++.|++++..|+.||++
T Consensus       300 ~~g~I--kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         300 AEGKI--KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             HhCCc--eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence            99999  6666568889  99999999999999999999864

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=7.4e-55  Score=377.11  Aligned_cols=338  Identities=30%  Similarity=0.476  Sum_probs=294.2

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        13 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      +++++|++.++ ++++++++.+++|++|||+||+.|+|+|++|....+         +..+..+|.++|||++|+|++||
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~---------G~~p~~~P~vLGHEgAGiVe~VG   71 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLS---------GDDPEGFPAVLGHEGAGIVEAVG   71 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhc---------CCCCCCCceecccccccEEEEec
Confidence            46899999977 799999999999999999999999999999999888         66677799999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC--C----------------C--CCCcceEEEEecCCce
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--P----------------P--TNGSLAHKVVHPAKLC  151 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------~--~~g~~~e~~~~~~~~~  151 (366)
                      ++|+++++||+|+..+..+||+|..|.++++++|....-...  .                .  -.++|+||.++++..+
T Consensus        72 ~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~  151 (366)
T COG1062          72 EGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISL  151 (366)
T ss_pred             CCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccce
Confidence            999999999999999999999999999999999995221100  0                1  1259999999999999


Q ss_pred             EECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793          152 YKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  229 (366)
Q Consensus       152 ~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  229 (366)
                      +|++++.+++.++++. ...|.+-++ ..+++++|++|.|.|.|++|+++||-|+..|+.+||+++.+++|.+++++||+
T Consensus       152 vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGA  231 (366)
T COG1062         152 VKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGA  231 (366)
T ss_pred             EECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCC
Confidence            9999999999999886 566677765 66999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHh-hhcCcEEE
Q 017793          230 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA-AAREVDVI  308 (366)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~  308 (366)
                      .++++.... .+..+.+.++.   ++|+|++|||+|....+++++.++.++|+.+.+|.......++...+ +....++.
T Consensus       232 T~~vn~~~~-~~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~  307 (366)
T COG1062         232 THFVNPKEV-DDVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWK  307 (366)
T ss_pred             ceeecchhh-hhHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEE
Confidence            999874322 25666666554   67999999999999999999999999999999998877666665553 23337888


Q ss_pred             Eeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          309 GIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       309 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      |++.+    +.++..+++|+.+|++.+++++++.++|  ++++|||+.+.+|+.. |-||++
T Consensus       308 Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~I-R~Vi~~  366 (366)
T COG1062         308 GSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKSI-RSVIRF  366 (366)
T ss_pred             EEeecCCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCcee-eEEecC
Confidence            88765    7789999999999999999999999999  9999999999999765 666653

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-53  Score=389.96  Aligned_cols=336  Identities=30%  Similarity=0.566  Sum_probs=290.0

Q ss_pred             cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      .++++++.++..+++++.|.| ++++||||||.++|||++|++++.+..     .+.....+|.++|||++|+|+++  +
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~-----~~~~~~~~p~v~GhE~~G~V~~v--~   75 (343)
T PRK09880          4 KTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGK-----VGNFVIKAPMVLGHEVIGKIVHS--D   75 (343)
T ss_pred             cceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCC-----cccccccCCcccCcccEEEEEEe--c
Confidence            478999999999999999997 689999999999999999998775211     11122457999999999999999  7


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC----CCCCcceEEEEecCCceEECCCCCCccccccchhh
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPL  169 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~  169 (366)
                      +++|++||||++.+..+|++|.+|..+++++|++..+++..    ..+|+|+||++++++.++++|+++++++++...++
T Consensus        76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~  155 (343)
T PRK09880         76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPL  155 (343)
T ss_pred             CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHH
Confidence            88999999999999999999999999999999997766531    24799999999999999999999999887767788


Q ss_pred             HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ++||+++++....++++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++..  .++.+    +
T Consensus       156 ~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~  229 (343)
T PRK09880        156 AVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----Y  229 (343)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----H
Confidence            89999998777778999999999999999999999999977899999999999999999999887643  23322    2


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~  329 (366)
                      ... .+++|++|||+|++..+..++++++++|+++.+|.......++...+..+++++.+++...++++++++++++|++
T Consensus       230 ~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i  308 (343)
T PRK09880        230 KAE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVI  308 (343)
T ss_pred             hcc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCC
Confidence            221 2469999999998778899999999999999999765545566667778899999988777889999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+.+.++++|++  +++++|++.+.++...||+++.+
T Consensus       309 ~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        309 NPLPLLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             CchhheEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            877889999999  99999999999988889999864

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.1e-50  Score=375.03  Aligned_cols=335  Identities=33%  Similarity=0.591  Sum_probs=287.8

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      ||++++.+++.++++++|.|+|+++||+||+.++|+|++|++.+.+...       .+..+|.++|||++|+|+++|+++
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~-------~~~~~p~i~G~e~~G~V~~vG~~v   73 (339)
T cd08239           1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHR-------APAYQGVIPGHEPAGVVVAVGPGV   73 (339)
T ss_pred             CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCC-------ccCCCCceeccCceEEEEEECCCC
Confidence            6888998888999999999999999999999999999999988763210       012357899999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccc-cCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF-FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  172 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a  172 (366)
                      ++|++||+|++.+..+|++|.+|+.++.++|++... ++ ....|+|+||+.++.+.++++|+++++++|+.+. ++.+|
T Consensus        74 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g-~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta  152 (339)
T cd08239          74 THFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG-WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA  152 (339)
T ss_pred             ccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccc-cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHH
Confidence            999999999999999999999999999999998654 22 2457999999999999999999999999998875 78899


Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      |++++..++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..  .+ .+.+.++.  
T Consensus       153 ~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--  227 (339)
T cd08239         153 YHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--  227 (339)
T ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--
Confidence            99998888999999999999999999999999999965888999999999999999998887643  23 44444433  


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceee-chHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA-LTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID  330 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  330 (366)
                      .+.++|++|||+|+...+..++++|+++|+++.+|..... .+. ...+..+++++.+++.. .++++++++++.+|.+.
T Consensus       228 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~  306 (339)
T cd08239         228 SGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLE  306 (339)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCC
Confidence            2458999999999887778899999999999999865432 222 23467788999998876 46899999999999998


Q ss_pred             CCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.+.++++|++  +++++|++.++++. .||+|+++
T Consensus       307 ~~~~i~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         307 VDRLVTHRFGL--DQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             hhHeEEEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence            88889999999  99999999998875 79999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.5e-50  Score=377.93  Aligned_cols=334  Identities=32%  Similarity=0.502  Sum_probs=285.8

Q ss_pred             ceEEEEee---------CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeE
Q 017793           15 NMAAWLLG---------IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG   85 (366)
Q Consensus        15 ~~~~~~~~---------~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G   85 (366)
                      |||+++.+         ++.++++++|.|+|+++||+|||.++|||++|++++.|         ..+..+|.++|||++|
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g---------~~~~~~p~i~GhE~~G   71 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVING---------DRPRPLPMALGHEAAG   71 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcC---------CCCCCCCccCCcccee
Confidence            67888884         35689999999999999999999999999999998884         2234568999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC--------------------CCCCcceEEEE
Q 017793           86 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------------------PTNGSLAHKVV  145 (366)
Q Consensus        86 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~e~~~  145 (366)
                      +|+++|+++++|++||||++.+..+|++|.+|+.|++++|++.......                    ...|+|+||+.
T Consensus        72 ~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~  151 (371)
T cd08281          72 VVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAV  151 (371)
T ss_pred             EEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEE
Confidence            9999999999999999999988889999999999999999875322100                    01379999999


Q ss_pred             ecCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793          146 HPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI  223 (366)
Q Consensus       146 ~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~  223 (366)
                      ++++.++++|+++++++|+.+. .+.+||+++ +..++++|++|||+|+|++|++++|+|+..|++.|++++++++|.++
T Consensus       152 v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~  231 (371)
T cd08281         152 VSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLAL  231 (371)
T ss_pred             ecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHH
Confidence            9999999999999999998876 678889887 56889999999999999999999999999999778999999999999


Q ss_pred             HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhh
Q 017793          224 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAA  301 (366)
Q Consensus       224 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~  301 (366)
                      ++++|++.++++.+  +++.+.++++.   ++++|++|||+|....+..++++++++|+++.+|....  ...++...++
T Consensus       232 a~~~Ga~~~i~~~~--~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~  306 (371)
T cd08281         232 ARELGATATVNAGD--PNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLV  306 (371)
T ss_pred             HHHcCCceEeCCCc--hhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHh
Confidence            99999998877533  45666665553   34899999999988789999999999999999997543  2345555678


Q ss_pred             hcCcEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          302 AREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       302 ~~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      .+++++.+++..    .++++++++++.+|++.+.+.++++|+|  +++++|++.+.+++..+|+|+
T Consensus       307 ~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         307 AEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             hcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence            899999998764    4678899999999999888889999999  999999999999988888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3e-51  Score=350.65  Aligned_cols=335  Identities=25%  Similarity=0.424  Sum_probs=284.2

Q ss_pred             CcccceEEEEeeC-C--ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEE
Q 017793           11 DKNQNMAAWLLGI-K--TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGI   86 (366)
Q Consensus        11 ~~~~~~~~~~~~~-~--~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~   86 (366)
                      .|+++++..+..+ +  ++++.+++.|+|+++||+||++|+|||++|++.+.|         ... ..+|.|+|||.+|+
T Consensus         6 ~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~g---------dwg~s~~PlV~GHEiaG~   76 (360)
T KOG0023|consen    6 IPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKG---------DWGLSKYPLVPGHEIAGV   76 (360)
T ss_pred             CchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhc---------cCCcccCCccCCceeeEE
Confidence            4666777777755 3  678899999999999999999999999999999983         222 67899999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCcccc--C----CCCCCCcceEEEEecCCceEECCCCCC
Q 017793           87 IEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFF--G----SPPTNGSLAHKVVHPAKLCYKLPDNVS  159 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~g~~~e~~~~~~~~~~~~P~~~~  159 (366)
                      |+++|++|++|++||||.+-. ..+|+.|.+|..+...+||++-+.  +    +..++|+|++|+++++.+++++|++++
T Consensus        77 VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~p  156 (360)
T KOG0023|consen   77 VVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLP  156 (360)
T ss_pred             EEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCC
Confidence            999999999999999999854 468999999999999999953332  2    234567799999999999999999999


Q ss_pred             ccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCC
Q 017793          160 LEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVST  237 (366)
Q Consensus       160 ~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~  237 (366)
                      .++||.+. ..-|+|..+++.+++||+++.|.|+|++|.+++|+||++|. +|+++++++ +|.+.++.||+|..++.. 
T Consensus       157 l~~aAPlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~-  234 (360)
T KOG0023|consen  157 LASAAPLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDST-  234 (360)
T ss_pred             hhhccchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEec-
Confidence            99999876 45578889999999999999999987799999999999999 788888777 777888889999988753 


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCC
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RST  316 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  316 (366)
                      .++++.+.+.+.   ...++|-|.+.  ..-.+..+++.|+.+|+++++|.+.....++...+.++.+.+.|+..+ +.+
T Consensus       235 ~d~d~~~~~~~~---~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ke  309 (360)
T KOG0023|consen  235 EDPDIMKAIMKT---TDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKE  309 (360)
T ss_pred             CCHHHHHHHHHh---hcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHH
Confidence            245555554433   35566666554  344688899999999999999998887788888999999999999877 889


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .++++++..++.+  +..+ +..++  +++++|+++++++....|.|+++
T Consensus       310 t~E~Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  310 TQEALDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             HHHHHHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence            9999999999999  5555 67788  99999999999999999998864

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=9.8e-50  Score=373.46  Aligned_cols=343  Identities=26%  Similarity=0.425  Sum_probs=286.7

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      .+.+||++++.++. ++.++++|.|+|+++||+|||.++|||++|++.+.|...       ....+|.++|||++|+|++
T Consensus         7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~-------~~~~~p~i~GhE~~G~V~~   79 (381)
T PLN02740          7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE-------AQRAYPRILGHEAAGIVES   79 (381)
T ss_pred             cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCc-------ccCCCCccccccceEEEEE
Confidence            56789999999885 689999999999999999999999999999998884320       1234689999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC-----------------------CCCCCcceEEEEe
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-----------------------PPTNGSLAHKVVH  146 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~e~~~~  146 (366)
                      +|+++++|++||||++.+..+|+.|.+|..+.++.|+++...+.                       ....|+|+||+++
T Consensus        80 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v  159 (381)
T PLN02740         80 VGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVL  159 (381)
T ss_pred             eCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEE
Confidence            99999999999999999999999999999999999998653211                       0126999999999


Q ss_pred             cCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          147 PAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       147 ~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      +.+.++++|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.+++
T Consensus       160 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a  239 (381)
T PLN02740        160 DSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG  239 (381)
T ss_pred             ehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence            999999999999999988775 678888876 568899999999999999999999999999996799999999999999


Q ss_pred             HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeechHh-hh
Q 017793          225 RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AA  302 (366)
Q Consensus       225 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~  302 (366)
                      +++|++.++++.....++.+.+.++.   ++++|++||++|++..+..++.+++++ |+++.+|.......++.... +.
T Consensus       240 ~~~Ga~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~  316 (381)
T PLN02740        240 KEMGITDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF  316 (381)
T ss_pred             HHcCCcEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh
Confidence            99999988876443334666665553   338999999999888899999999996 99999997654322332222 34


Q ss_pred             cCcEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          303 REVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       303 ~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++.++.|++.+    ...++++++++.++.+.+.+.++++|+|  +++++|++.+.+++. .|++|++
T Consensus       317 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        317 DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence            67888887653    2468899999999999888889999999  999999999988865 5999864

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.1e-49  Score=370.39  Aligned_cols=337  Identities=26%  Similarity=0.443  Sum_probs=284.7

Q ss_pred             cceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           14 QNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        14 ~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      +||++++++++ +++++++|.|.|+++||+|||.++|+|++|++...|         .....+|.++|||++|+|+++|+
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g---------~~~~~~p~i~G~e~~G~V~~vG~   71 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREG---------GINDEFPFLLGHEAAGVVEAVGE   71 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcC---------CccccCCcccccceEEEEEEeCC
Confidence            58999999874 689999999999999999999999999999998873         22335689999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------CC----CCCCCcceEEEEecCCceEECCCCCCc
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--------GS----PPTNGSLAHKVVHPAKLCYKLPDNVSL  160 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~e~~~~~~~~~~~~P~~~~~  160 (366)
                      ++++|++||+|++.+..+|+.|.+|..+++++|++....        +.    ....|+|+||+.++++.++++|+++++
T Consensus        72 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~  151 (358)
T TIGR03451        72 GVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADP  151 (358)
T ss_pred             CCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCCh
Confidence            999999999999999999999999999999999863211        00    013599999999999999999999999


Q ss_pred             cccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793          161 EEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD  238 (366)
Q Consensus       161 ~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  238 (366)
                      ++|+.+. .+.+||.++ +..++++|++|||+|+|++|++++|+|+..|+.+|++++++++|.++++++|++.++++.. 
T Consensus       152 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~-  230 (358)
T TIGR03451       152 AAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG-  230 (358)
T ss_pred             hHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC-
Confidence            9888775 567778776 4578999999999999999999999999999977999999999999999999998887543 


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEEEeecc---
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY---  313 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~---  313 (366)
                       +++.+.+.++.  .+.++|++|||+|++..+..++++++++|+++.+|.....  ..++...++.++.++.+++..   
T Consensus       231 -~~~~~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  307 (358)
T TIGR03451       231 -TDPVEAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL  307 (358)
T ss_pred             -cCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence             45656555543  3568999999999877899999999999999999976432  234444567788888887643   


Q ss_pred             -CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 -RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 -~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                       .+.++++++++++|++.+.+.++++|++  +++++|++.+.+++.. |+++++
T Consensus       308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~~  358 (358)
T TIGR03451       308 PERDFPMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVEL  358 (358)
T ss_pred             cHHHHHHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEeC
Confidence             4578899999999999877789999999  9999999999988665 877753

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.9e-49  Score=370.52  Aligned_cols=336  Identities=24%  Similarity=0.412  Sum_probs=282.7

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      .||++++.++ +.++++++|.|+|+++||+|||.++|||++|++.+.+         .  ..+|.++|||++|+|+++|+
T Consensus        12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g---------~--~~~p~i~GhE~~G~V~~vG~   80 (378)
T PLN02827         12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWES---------Q--ALFPRIFGHEASGIVESIGE   80 (378)
T ss_pred             eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcC---------C--CCCCeeecccceEEEEEcCC
Confidence            4788888876 4799999999999999999999999999999988772         1  14688999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccC----------------C----CCCCCcceEEEEecCCceE
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG----------------S----PPTNGSLAHKVVHPAKLCY  152 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~----~~~~g~~~e~~~~~~~~~~  152 (366)
                      ++++|++||+|++.+..+|+.|.+|+.+++++|+++....                .    ...+|+|+||+.++++.++
T Consensus        81 ~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~  160 (378)
T PLN02827         81 GVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (378)
T ss_pred             CCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheE
Confidence            9999999999999988899999999999999999854311                0    0124899999999999999


Q ss_pred             ECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793          153 KLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD  230 (366)
Q Consensus       153 ~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  230 (366)
                      ++|+++++++++.+. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++
T Consensus       161 ~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~  240 (378)
T PLN02827        161 KVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT  240 (378)
T ss_pred             ECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence            999999998888765 566778765 457899999999999999999999999999997788888899999999999999


Q ss_pred             eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeec-hHhhhcCcEEE
Q 017793          231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVAL-TPAAAREVDVI  308 (366)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~  308 (366)
                      .++++.....++.+.+.++.   ++++|++||++|....+..+++.++++ |+++.+|.......+.. ..++.+++++.
T Consensus       241 ~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~  317 (378)
T PLN02827        241 DFINPNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLK  317 (378)
T ss_pred             EEEcccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEE
Confidence            88876542235555555543   348999999999877889999999998 99999997654333333 34677899999


Q ss_pred             Eeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          309 GIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       309 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      |++..    ..+++++++++++|++.+.+.++++|+|  +++++|++.+.+++. +|+||.+
T Consensus       318 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        318 GSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             eeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence            88654    3478899999999999776689999999  999999999998866 6999864

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1e-48  Score=362.85  Aligned_cols=335  Identities=28%  Similarity=0.500  Sum_probs=284.2

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.++..+++++.|.|+| +++||+|||.++|+|++|++.....       +  ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~-------~--~~~~p~i~G~e~~G~V~~vG~~   71 (347)
T PRK10309          1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKN-------G--AHYYPITLGHEFSGYVEAVGSG   71 (347)
T ss_pred             CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCC-------C--CCCCCcccccceEEEEEEeCCC
Confidence            6788888888899999999997 6999999999999999999754310       1  1235789999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV  173 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~  173 (366)
                      +++|++||+|++.+..+|+.|.+|..|..+.|+.+.+++. ...|+|+||+.++++.++++|+++++++|+.+.++++++
T Consensus        72 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~  150 (347)
T PRK10309         72 VDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGL  150 (347)
T ss_pred             CCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHH
Confidence            9999999999999999999999999999999998766553 358999999999999999999999999998876667788


Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ++++...++++++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..  .+ ...+.++.  .
T Consensus       151 ~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~--~  225 (347)
T PRK10309        151 HAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVL--R  225 (347)
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHh--c
Confidence            8877788899999999999999999999999999976888989999999999999998877543  22 23343332  2


Q ss_pred             CCCCc-EEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceee---chHhhhcCcEEEEeecc------CCChHHHHHH
Q 017793          254 GSGID-VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA---LTPAAAREVDVIGIFRY------RSTWPLCIEF  323 (366)
Q Consensus       254 ~~~~d-~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~~  323 (366)
                      +.++| ++|||+|+...+..+++.++++|+++.+|.......++   ...+..+++++.+++.+      ..++++++++
T Consensus       226 ~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  305 (347)
T PRK10309        226 ELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRL  305 (347)
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHH
Confidence            55788 99999998888999999999999999999665432222   23466788999987653      2568899999


Q ss_pred             HHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          324 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       324 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++|.+.+++.+++.|+|  +++++|++.+.+++..||+|+++
T Consensus       306 ~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        306 LTERKLSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             HHcCCCCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            999999888899999999  99999999999998889999874

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=5.6e-49  Score=361.87  Aligned_cols=337  Identities=36%  Similarity=0.631  Sum_probs=278.4

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCc-ccccceeEEEEEeCC
Q 017793           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM-VIGHECAGIIEEVGS   92 (366)
Q Consensus        15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~-i~G~e~~G~V~~vG~   92 (366)
                      |+++++..+. ...+++.+.|.++|++|+|||.++|||.+|++++.|.        ......|. ++|||++|+|+++| 
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~--------~~~~~~~~~i~GHE~~G~V~evG-   71 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGG--------EPFVPPGDIILGHEFVGEVVEVG-   71 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCC--------CCCCCCCCcccCccceEEEEEec-
Confidence            5777777664 4447787777789999999999999999999999932        11223344 99999999999999 


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC----CCCCcceEEEEecCCceEEC-CCCCCccccccch
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----PTNGSLAHKVVHPAKLCYKL-PDNVSLEEGAMCE  167 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~~~~~~~~~~-P~~~~~~~aa~~~  167 (366)
                      .++.|++||||++.|..+||+|.+|+.|.++.|++..+++..    ..+|+|+||+++|.++++++ |++++.+.|+...
T Consensus        72 ~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~e  151 (350)
T COG1063          72 VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTE  151 (350)
T ss_pred             cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcC
Confidence            778899999999999999999999999999999977666542    25799999999997666555 7777878888888


Q ss_pred             hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHH
Q 017793          168 PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTD  245 (366)
Q Consensus       168 ~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~  245 (366)
                      ++++++++. .....+++++|+|+|+|++|++++++++..|+.+|++++.+++|++++++ .+++.+.+...  ++....
T Consensus       152 pla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~--~~~~~~  229 (350)
T COG1063         152 PLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE--DDAGAE  229 (350)
T ss_pred             hhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc--ccHHHH
Confidence            999998874 44445666699999999999999999999999999999999999999999 55655544222  233333


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeec-c-CCChHHHHH
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFR-Y-RSTWPLCIE  322 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~  322 (366)
                      +.++  +.+.++|++|||+|....+..+++.++++|+++.+|...... .++...++.+++++.|++. . ...++.+++
T Consensus       230 ~~~~--t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~  307 (350)
T COG1063         230 ILEL--TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALD  307 (350)
T ss_pred             HHHH--hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHH
Confidence            3333  235689999999999888999999999999999999887665 5667788999999999965 3 568999999


Q ss_pred             HHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCC-ceEEEeeC
Q 017793          323 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFNL  366 (366)
Q Consensus       323 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi~~  366 (366)
                      ++.+|++.+.+.+++.+++  +++++|++.+.+.+. ..|+++++
T Consensus       308 ll~~g~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         308 LLASGKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HHHcCCCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999999999999999888  999999999998644 66998864

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-49  Score=337.19  Aligned_cols=340  Identities=27%  Similarity=0.431  Sum_probs=293.5

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        13 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      =+.|||+.-.+ .+|.++|+.+++|+.+||.||+.+.++|++|...++|+.        ....+|.|+|||++|+|+.+|
T Consensus         6 I~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~--------~~~~fP~IlGHEaaGIVESvG   77 (375)
T KOG0022|consen    6 ITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD--------PEGLFPVILGHEAAGIVESVG   77 (375)
T ss_pred             eEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC--------ccccCceEecccceeEEEEec
Confidence            45789999877 799999999999999999999999999999999999542        235679999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC---------------------CCCCcceEEEEecCCc
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------------------PTNGSLAHKVVHPAKL  150 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~e~~~~~~~~  150 (366)
                      ++|+++++||+|+..+...|++|.+|.++..++|..+......                     ....+|+||.+++...
T Consensus        78 egV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~  157 (375)
T KOG0022|consen   78 EGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDIS  157 (375)
T ss_pred             CCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecce
Confidence            9999999999999999999999999999999999886554310                     0124999999999999


Q ss_pred             eEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017793          151 CYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG  228 (366)
Q Consensus       151 ~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg  228 (366)
                      ++++++..+++.++++. ..+|+|.+. +.++++||+++.|+|-|++|++++|-||+.|+.+||++|-+++|.+.+++||
T Consensus       158 v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fG  237 (375)
T KOG0022|consen  158 VAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFG  237 (375)
T ss_pred             eEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcC
Confidence            99999999999999886 688888775 6799999999999999999999999999999999999999999999999999


Q ss_pred             CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeechHh-hhcCcE
Q 017793          229 ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AAREVD  306 (366)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~  306 (366)
                      +.+.+|.........+.++++   +++|+|+.|||+|....+.+++.+...+ |+-+.+|.......+....+ +.+...
T Consensus       238 aTe~iNp~d~~~~i~evi~Em---TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~  314 (375)
T KOG0022|consen  238 ATEFINPKDLKKPIQEVIIEM---TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRT  314 (375)
T ss_pred             cceecChhhccccHHHHHHHH---hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccE
Confidence            999988642222355555555   4789999999999999999999999998 99999997776655555543 344555


Q ss_pred             EEEee----ccCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          307 VIGIF----RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       307 ~~~~~----~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.|+.    ..+.++..+++.+.++++.++..+++.++|  +++++||++|.+|+.. |.|+.+
T Consensus       315 ~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  315 WKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             EEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence            55443    337789999999999999999999999999  9999999999999776 777754

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1.1e-48  Score=364.74  Aligned_cols=337  Identities=28%  Similarity=0.434  Sum_probs=277.9

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |+++++..+ ..++++++|.|+|+++||+|||.++|+|++|+++..|.+        ....+|.++|||++|+|+++|++
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~--------~~~~~p~i~GhE~~G~V~~vG~~   73 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGAD--------PEGVFPVILGHEGAGIVEAVGEG   73 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCC--------CCCCCCeeeccccEEEEEEECCC
Confidence            678877765 579999999999999999999999999999999887431        01346899999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CCC-----------------CCCCcceEEEEecCCceEE
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP-----------------PTNGSLAHKVVHPAKLCYK  153 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~~~~~~~~~  153 (366)
                      +++|++||||++.+..+|++|.+|+.+++++|+++...   +..                 ...|+|+||++++.+.+++
T Consensus        74 v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  153 (368)
T TIGR02818        74 VTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAK  153 (368)
T ss_pred             CccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEE
Confidence            99999999999988889999999999999999975311   100                 0247999999999999999


Q ss_pred             CCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          154 LPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       154 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      +|+++++++++.+. ++.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++.++++.++++++|++.
T Consensus       154 lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~  233 (368)
T TIGR02818       154 INPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATD  233 (368)
T ss_pred             CCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCe
Confidence            99999999998876 788899987 5688999999999999999999999999999977999999999999999999998


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCC--ceeechHhhhcCcEEE
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTE--MTVALTPAAAREVDVI  308 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~  308 (366)
                      ++++.+...++.+.+.++.   ++++|++|||+|++..+..++++++++ |+++.+|.....  ..+....+. ....+.
T Consensus       234 ~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~  309 (368)
T TIGR02818       234 CVNPNDYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWR  309 (368)
T ss_pred             EEcccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEE
Confidence            8876532344555555543   348999999999877889999999886 999999975422  122222222 234456


Q ss_pred             Eeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          309 GIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       309 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++...    ..++.++++++.++++.+++.+++.|+|  +++++|++.+++++. +|++|.+
T Consensus       310 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       310 GSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             EeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCCc-eeEEeeC
Confidence            65432    3468899999999999888889999999  999999999988754 7999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=6.4e-49  Score=367.62  Aligned_cols=337  Identities=24%  Similarity=0.428  Sum_probs=269.7

Q ss_pred             cceEEEEeeCCceEEEEecCCCCC-------CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793           14 QNMAAWLLGIKTLKIQPYHLPTLG-------PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI   86 (366)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~p~~~-------~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   86 (366)
                      -||++++.+++.++++++|.|+|+       +|||||||.++|||++|++++.|         .....+|.++|||++|+
T Consensus         2 ~mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g---------~~~~~~p~i~GhE~~G~   72 (393)
T TIGR02819         2 GNRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRG---------RTTAPTGLVLGHEITGE   72 (393)
T ss_pred             CceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCC---------CCCCCCCccccceeEEE
Confidence            378899988888999999999874       68999999999999999998883         22345689999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------ccCCC---CCCCcceEEEEecCC--ceEECC
Q 017793           87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------FFGSP---PTNGSLAHKVVHPAK--LCYKLP  155 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~e~~~~~~~--~~~~~P  155 (366)
                      |+++|++|++|++||||.+.+..+|+.|.+|+.|++++|++..      +++..   ..+|+|+||++++..  .++++|
T Consensus        73 V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP  152 (393)
T TIGR02819        73 VIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFP  152 (393)
T ss_pred             EEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECC
Confidence            9999999999999999999999999999999999999999753      12211   247999999999964  799999


Q ss_pred             CCCCc----cccccc-hhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793          156 DNVSL----EEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD  230 (366)
Q Consensus       156 ~~~~~----~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  230 (366)
                      ++++.    .+++.+ .++.++|+++++.+++++++|||.|+|++|++++|+|+.+|+..+++++.+++|.++++++|++
T Consensus       153 ~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~  232 (393)
T TIGR02819       153 DRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCE  232 (393)
T ss_pred             CcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCe
Confidence            98753    233333 4788999999888899999999999999999999999999997777778888999999999997


Q ss_pred             eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh--------------HHHHHHHHhhcCCceEEEEcccC-CCc-e
Q 017793          231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD--------------KTMSTALNATRPGGKVCLIGLAK-TEM-T  294 (366)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~-~  294 (366)
                      . +++. ...++.+.+.++.  .+.++|++||++|.+              ..++.+++.++++|+++.+|.+. ... .
T Consensus       233 ~-v~~~-~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~  308 (393)
T TIGR02819       233 T-VDLS-KDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGA  308 (393)
T ss_pred             E-EecC-CcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccc
Confidence            4 4432 2235555555543  356899999999985              37999999999999999999753 111 1


Q ss_pred             -----------eechHhhhcCcEEEEeeccC-CChHHHHHHHHCCCCCCCCceE-EEecCChhhHHHHHHHHHcCCCceE
Q 017793          295 -----------VALTPAAAREVDVIGIFRYR-STWPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIK  361 (366)
Q Consensus       295 -----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~gk  361 (366)
                                 +.....+.+..++.+..... +.+.++++++.+|++++.++++ ++|+|  +++++|++.+.+++ .+|
T Consensus       309 ~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~K  385 (393)
T TIGR02819       309 VDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKK  385 (393)
T ss_pred             ccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceE
Confidence                       11222344556666543332 3347899999999998777777 68999  99999999999874 489


Q ss_pred             EEeeC
Q 017793          362 VMFNL  366 (366)
Q Consensus       362 vvi~~  366 (366)
                      ++|.+
T Consensus       386 vvi~~  390 (393)
T TIGR02819       386 FVIDP  390 (393)
T ss_pred             EEEeC
Confidence            99863

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=3.2e-48  Score=362.30  Aligned_cols=337  Identities=26%  Similarity=0.423  Sum_probs=281.1

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      +||++++..+ ..++++++|.|+|+++||+|||.++|||++|++.+.|..        ....+|.++|||++|+|+++|+
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~--------~~~~~p~i~G~e~~G~V~~vG~   73 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKG--------QTPLFPRILGHEAAGIVESVGE   73 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCC--------CCCCCCcccccccceEEEEeCC
Confidence            6899998866 579999999999999999999999999999999888431        1235689999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CCC------------------CCCCcceEEEEecCCce
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP------------------PTNGSLAHKVVHPAKLC  151 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~e~~~~~~~~~  151 (366)
                      ++++|++||||++.+..+|++|.+|..++++.|+.+.+.   +..                  ...|+|+||++++.+.+
T Consensus        74 ~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  153 (369)
T cd08301          74 GVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCV  153 (369)
T ss_pred             CCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccE
Confidence            999999999999999999999999999999999986432   000                  03489999999999999


Q ss_pred             EECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793          152 YKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  229 (366)
Q Consensus       152 ~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  229 (366)
                      +++|+++++++++.+. .+.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|+
T Consensus       154 ~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga  233 (369)
T cd08301         154 AKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGV  233 (369)
T ss_pred             EECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence            9999999999988775 677888876 45889999999999999999999999999998678999999999999999999


Q ss_pred             ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeechH-hhhcCcEE
Q 017793          230 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-AAAREVDV  307 (366)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~  307 (366)
                      +.++++....+++.+.++++.   ++++|++||++|....+..++++++++ |+++.+|.......++... .+.+++++
T Consensus       234 ~~~i~~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i  310 (369)
T cd08301         234 TEFVNPKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTL  310 (369)
T ss_pred             ceEEcccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeE
Confidence            988775432234555555553   448999999999887888999999996 9999999765322222222 23467888


Q ss_pred             EEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          308 IGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       308 ~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      .+++..    +.+++++++++.++.+++.+.++++|+|  +++++|++.+++++. .|+++
T Consensus       311 ~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~  368 (369)
T cd08301         311 KGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCIL  368 (369)
T ss_pred             EEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEe
Confidence            887643    3468899999999999877888999999  999999999999876 48886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.1e-48  Score=355.29  Aligned_cols=309  Identities=30%  Similarity=0.419  Sum_probs=257.0

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.+.   +.++++++|.|.|++|||||||+|+||||.|+.+.+|.       .....++|+++|.|++|+|+++|
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~-------~~~~~~~P~i~G~d~aG~V~avG   73 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL-------APPVRPLPFIPGSEAAGVVVAVG   73 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCC-------CCCCCCCCCcccceeEEEEEEeC
Confidence            567777743   45899999999999999999999999999999999843       11234589999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++|++|++||||+..+ .                        ...+|+|+||+.++++.++++|+++|+++||+++ ...
T Consensus        74 ~~V~~~~~GdrV~~~~-~------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~  128 (326)
T COG0604          74 SGVTGFKVGDRVAALG-G------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL  128 (326)
T ss_pred             CCCCCcCCCCEEEEcc-C------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence            9999999999999742 0                        0047999999999999999999999999999997 788


Q ss_pred             HHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      |||+++.. .++++|++|||+| +|++|.+++||||++|+ .++++.+++++.++++++|++.+++|..  +++.+.+++
T Consensus       129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~  205 (326)
T COG0604         129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRE  205 (326)
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHH
Confidence            99999954 8899999999998 79999999999999998 4555557777777999999999999754  568888887


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhhhcCcEEEEeeccC-------CChHH
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRYR-------STWPL  319 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  319 (366)
                      +..  +.++|+|||++|+. .+..++.+|+++|+++.+|...+  ...++...+..+.+.+.+.....       +.+++
T Consensus       206 ~t~--g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  282 (326)
T COG0604         206 LTG--GKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAE  282 (326)
T ss_pred             HcC--CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHH
Confidence            753  56899999999976 78889999999999999997663  33344556677778888776652       36777


Q ss_pred             HHHHHHCCCCCCCCceEEEecCChhhHH--HHHHHHHcCCCceEEEeeC
Q 017793          320 CIEFLRSGKIDVKPLITHRFGFTQKEIE--DAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~--~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++++|.+  ++.+.++|+|  ++..  .++..+. ++..||+|+++
T Consensus       283 l~~~~~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~-~~~~GKvvl~~  326 (326)
T COG0604         283 LFDLLASGKL--KPVIDRVYPL--AEAPAAAAHLLLE-RRTTGKVVLKV  326 (326)
T ss_pred             HHHHHHcCCC--cceeccEech--hhhHHHHHHHHcc-cCCcceEEEeC
Confidence            9999999999  7778789999  8854  4444444 58999999974

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=9.8e-48  Score=356.86  Aligned_cols=345  Identities=38%  Similarity=0.648  Sum_probs=292.8

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhccccccccc---CccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA---NFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~---~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.+++.++++++|.|+|+++||+||+.++++|++|+....+.........   .....+|.++|+|++|+|+++|
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   80 (351)
T cd08233           1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG   80 (351)
T ss_pred             CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence            6788888888999999999999999999999999999999976653211000000   0112368899999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV  171 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~  171 (366)
                      +++++|++||+|++.+..+|+.|.+|+.+.+.+|++..+.+....+|+|+||+.++.+.++++|+++++++++.+.++.+
T Consensus        81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t  160 (351)
T cd08233          81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV  160 (351)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence            99999999999999988899999999999999999887655433479999999999999999999999999987777889


Q ss_pred             HHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ||+++...++++|++|||+|+|++|++++|+|+..|++.|+++++++++.++++++|++.++++..  .++.+.+.++. 
T Consensus       161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~~~~-  237 (351)
T cd08233         161 AWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLT-  237 (351)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHHHHh-
Confidence            999997788999999999999999999999999999977888889999999999999998887543  46666665543 


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID  330 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  330 (366)
                       .++++|++||++|+...+..++++|+++|+++.+|.......++...+..+++++.+.+.+ .+++++++++++++.+.
T Consensus       238 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~  316 (351)
T cd08233         238 -GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKID  316 (351)
T ss_pred             -CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCC
Confidence             2457999999999877889999999999999999976544555666677888999998766 67899999999999997


Q ss_pred             CCCceEEEecCChhhH-HHHHHHHHcCCCc-eEEEee
Q 017793          331 VKPLITHRFGFTQKEI-EDAFEISAQGGNA-IKVMFN  365 (366)
Q Consensus       331 ~~~~~~~~~~l~~~~~-~~a~~~~~~~~~~-gkvvi~  365 (366)
                      +.+.++++|++  +++ ++|++.+.+++.. ||+||.
T Consensus       317 ~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         317 AEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             hHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence            77778889999  996 7999999999874 999974

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=8.5e-48  Score=359.01  Aligned_cols=337  Identities=28%  Similarity=0.446  Sum_probs=277.2

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      +||++++..+ ++++++++|.|+|+++||+|||.++|+|++|++++.|.+        ....+|.++|||++|+|+++|+
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~--------~~~~~p~v~G~E~~G~V~~vG~   73 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGAD--------PEGLFPVILGHEGAGIVESVGE   73 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCC--------ccCCCCceeccceeEEEEEeCC
Confidence            4788887755 689999999999999999999999999999999887431        1134689999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCcceEEEEecCCceE
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCY  152 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~e~~~~~~~~~~  152 (366)
                      ++++|++||+|++.+..+|++|.+|+.++++.|+++...   +.                 ....|+|+||+.++.+.++
T Consensus        74 ~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  153 (368)
T cd08300          74 GVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVA  153 (368)
T ss_pred             CCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceE
Confidence            999999999999998899999999999999999875321   00                 0024799999999999999


Q ss_pred             ECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793          153 KLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD  230 (366)
Q Consensus       153 ~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  230 (366)
                      ++|+++++++|+.+. .+.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++
T Consensus       154 ~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~  233 (368)
T cd08300         154 KINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGAT  233 (368)
T ss_pred             eCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCC
Confidence            999999999998876 778899887 558899999999999999999999999999997799999999999999999999


Q ss_pred             eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCcee--echHhhhcCcEE
Q 017793          231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV--ALTPAAAREVDV  307 (366)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~--~~~~~~~~~~~~  307 (366)
                      .++++.+..+++.+.+.++.   ++++|++||++|+...+..++++++++ |+++.+|.......+  ....+. ....+
T Consensus       234 ~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~  309 (368)
T cd08300         234 DCVNPKDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVW  309 (368)
T ss_pred             EEEcccccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeE
Confidence            98876543234666665553   348999999999877899999999886 999999865322122  222222 33455


Q ss_pred             EEeec----cCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          308 IGIFR----YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       308 ~~~~~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      .++..    ...++++++++++++++.+.+.++++|+|  +++++|++.+.+++. .|++++
T Consensus       310 ~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         310 KGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             EEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence            55432    24678899999999999877889999999  999999999988865 688874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.9e-48  Score=358.42  Aligned_cols=336  Identities=22%  Similarity=0.319  Sum_probs=273.9

Q ss_pred             ccCCcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793            8 DEGDKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI   86 (366)
Q Consensus         8 ~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   86 (366)
                      ++..|+++.+++..+. +.+++.++|.|.|+++||+|||.++|||++|++++.|..        ....+|.++|||++|+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~--------~~~~~p~i~GhE~~G~   77 (360)
T PLN02586          6 EEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEW--------GFTRYPIVPGHEIVGI   77 (360)
T ss_pred             hhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCc--------CCCCCCccCCcceeEE
Confidence            4456777777777755 678999999999999999999999999999999887421        1134689999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCC
Q 017793           87 IEEVGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVS  159 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~  159 (366)
                      |+++|+++++|++||+|++.+. .+|++|.+|+.|.+++|++..+..      +...+|+|+||++++.+.++++|++++
T Consensus        78 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls  157 (360)
T PLN02586         78 VTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLP  157 (360)
T ss_pred             EEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCC
Confidence            9999999999999999986554 579999999999999999865431      122479999999999999999999999


Q ss_pred             ccccccch-hhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceeeecC
Q 017793          160 LEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADETAKVS  236 (366)
Q Consensus       160 ~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~  236 (366)
                      +++|+.+. .+.++|+++.. ..+++|++|||.|+|++|++++|+||.+|+ .+++++.+++ +.++++++|++.++++.
T Consensus       158 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~  236 (360)
T PLN02586        158 LDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVST  236 (360)
T ss_pred             HHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCC
Confidence            99998776 67788888864 557899999999999999999999999999 4665555544 45677899999887643


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CC
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RS  315 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  315 (366)
                      .  .   +.+++..    +++|++||++|....++.++++++++|+++.+|.......++...++.++..+.+++.+ ..
T Consensus       237 ~--~---~~~~~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  307 (360)
T PLN02586        237 D--P---EKMKAAI----GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIK  307 (360)
T ss_pred             C--H---HHHHhhc----CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHH
Confidence            2  1   2333332    36999999999877889999999999999999865444455566667777788777654 45


Q ss_pred             ChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       316 ~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++++++++|++.  +.+ ++|+|  +++++|++.+.+++..||+|+++
T Consensus       308 ~~~~~~~li~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        308 ETQEMLDFCAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHHHHHHHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence            789999999999994  444 57899  99999999999998889999864

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.1e-47  Score=355.98  Aligned_cols=336  Identities=28%  Similarity=0.445  Sum_probs=280.7

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      .+|++++..+ +.++++++|.|.++++||+|||.++|+|++|++.+.|         .....+|.++|||++|+|+++|+
T Consensus         2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g---------~~~~~~p~i~G~e~~G~V~~vG~   72 (365)
T cd08277           2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEG---------FKATLFPVILGHEGAGIVESVGE   72 (365)
T ss_pred             ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcC---------CCCCCCCeecccceeEEEEeeCC
Confidence            4788888865 5689999999999999999999999999999998883         22345689999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC-------------------CCCCCcceEEEEecCCceEE
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-------------------PPTNGSLAHKVVHPAKLCYK  153 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~e~~~~~~~~~~~  153 (366)
                      +++++++||+|++.+..+|++|.+|..|++++|++......                   ....|+|+||++++.+.+++
T Consensus        73 ~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~  152 (365)
T cd08277          73 GVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAK  152 (365)
T ss_pred             CCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEE
Confidence            99999999999999889999999999999999998643210                   01258999999999999999


Q ss_pred             CCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          154 LPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       154 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      +|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.
T Consensus       153 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~  232 (365)
T cd08277         153 IDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATD  232 (365)
T ss_pred             CCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCc
Confidence            99999999998876 788899886 5688999999999999999999999999999977999999999999999999998


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCC-CceeechHhhhcCcEEEE
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT-EMTVALTPAAAREVDVIG  309 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~  309 (366)
                      +++......++.+.+.++.   ++++|++|||+|+...+..++++++++ |+++.+|.... ..+++...+.. +.++.+
T Consensus       233 ~i~~~~~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g  308 (365)
T cd08277         233 FINPKDSDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKG  308 (365)
T ss_pred             EeccccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEe
Confidence            8775433234455555443   468999999999877889999999885 99999987542 22333333443 778887


Q ss_pred             eecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          310 IFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       310 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++.+    ..++++++++++++.+.+.+.++++|+|  +++++|++.+++++ ..|++++
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         309 SFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             eecCCCChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence            7654    3468899999999998878889999999  99999999999886 4698874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.3e-48  Score=322.89  Aligned_cols=308  Identities=27%  Similarity=0.384  Sum_probs=265.6

Q ss_pred             CcccceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCc-cCCCCcccccceeEE
Q 017793           11 DKNQNMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF-IVKKPMVIGHECAGI   86 (366)
Q Consensus        11 ~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~-~~~~p~i~G~e~~G~   86 (366)
                      .|++.+..+++   +++.+++++.|.|+|.|+|++||..|+|+|+.|.-+.+         |.+ +.+.|+++|.|++|+
T Consensus         5 ~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~Rk---------GlY~~~plPytpGmEaaGv   75 (336)
T KOG1197|consen    5 SPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRK---------GLYDPAPLPYTPGMEAAGV   75 (336)
T ss_pred             CCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhc---------cccCCCCCCcCCCcccceE
Confidence            46777888888   44789999999999999999999999999999998888         445 678899999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793           87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~  166 (366)
                      |+++|++|+++++||||+..                            +..|.|+|+..+|...++++|+.+++.+||++
T Consensus        76 VvAvG~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~  127 (336)
T KOG1197|consen   76 VVAVGEGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAAL  127 (336)
T ss_pred             EEEecCCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHH
Confidence            99999999999999999964                            46899999999999999999999999999877


Q ss_pred             h-hhHHHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchH
Q 017793          167 E-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  243 (366)
Q Consensus       167 ~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  243 (366)
                      . ...|||..+++ .++++|++||++. +|++|++++|++++.|+ .+|++.++.+|++.+++.|+.+.|+|++  +|+.
T Consensus       128 llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v  204 (336)
T KOG1197|consen  128 LLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYV  204 (336)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHH
Confidence            6 78888888754 8999999999996 89999999999999999 7888889999999999999999999865  7888


Q ss_pred             HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEE-----EeeccCCC-
Q 017793          244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVI-----GIFRYRST-  316 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~-  316 (366)
                      +.+.+++.  ++|+|+++|++|.+ ++..++.+|++.|.++.+|..++.. ++++..++.+.+.+.     |...++.. 
T Consensus       205 ~~V~kiTn--gKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el  281 (336)
T KOG1197|consen  205 DEVKKITN--GKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVEL  281 (336)
T ss_pred             HHHHhccC--CCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHH
Confidence            88888864  89999999999965 8999999999999999999776533 344444444444433     22222222 


Q ss_pred             ---hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          317 ---WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       317 ---~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                         ..+++.++.+|.+  .+.+.++|+|  +++.+|+..+++.+..||+++.
T Consensus       282 ~~~v~rl~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  282 VSYVARLFALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL  329 (336)
T ss_pred             HHHHHHHHHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence               3467888889999  8888999999  9999999999999999999974

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=4.7e-47  Score=353.42  Aligned_cols=320  Identities=22%  Similarity=0.334  Sum_probs=264.8

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV  103 (366)
Q Consensus        24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V  103 (366)
                      +.+.+.++|.|.|+++||+|||.++|||++|++++.|.+        ....+|.++|||++|+|+++|+++++|++||||
T Consensus        17 ~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~--------~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV   88 (375)
T PLN02178         17 GVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHW--------GFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV   88 (375)
T ss_pred             CCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCC--------CCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence            678888999999999999999999999999999887421        012458899999999999999999999999999


Q ss_pred             EEcCCc-CCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHH
Q 017793          104 ALEPGI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA  175 (366)
Q Consensus       104 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~  175 (366)
                      ++.+.. +|++|.+|+.|++++|++..+..      +....|+|+||+.++++.++++|+++++++|+.+. ...++|++
T Consensus        89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~a  168 (375)
T PLN02178         89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSP  168 (375)
T ss_pred             EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHH
Confidence            876654 69999999999999999865321      11236999999999999999999999999998775 66788888


Q ss_pred             HHhCC--CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          176 CRRAN--VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       176 l~~~~--~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      +....  .++|++|+|.|+|++|++++|+|+.+|+ .+++++.++ ++.++++++|++.++++..  .   +.+.+.   
T Consensus       169 l~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~~~---  239 (375)
T PLN02178        169 MKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD--S---QKMKEA---  239 (375)
T ss_pred             HHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--H---HHHHHh---
Confidence            86543  3689999999999999999999999999 567766654 4578889999998877532  1   233332   


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCC
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV  331 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~  331 (366)
                      . .++|++|||+|.+..+..++++++++|+++.+|.......++...+..+++++.|++.+ .++++++++++++|++  
T Consensus       240 ~-~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i--  316 (375)
T PLN02178        240 V-GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKI--  316 (375)
T ss_pred             h-CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCC--
Confidence            2 36999999999877789999999999999999976544455666677888999998765 4678999999999999  


Q ss_pred             CCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          332 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       332 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++.+ +.|+|  +++++|++.+.+++..||+|+++
T Consensus       317 ~~~i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        317 VSDI-ELIKM--SDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             cccE-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            4445 57899  99999999999998899999864

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=5.7e-47  Score=351.10  Aligned_cols=333  Identities=23%  Similarity=0.441  Sum_probs=278.7

Q ss_pred             EEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCC
Q 017793           19 WLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   97 (366)
Q Consensus        19 ~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   97 (366)
                      ++.++. .++++++|.|.|+++||+|||.++|+|++|++.+.+..       .....+|.++|||++|+|+++|++++.+
T Consensus         3 ~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~-------~~~~~~p~i~GhE~~G~V~~vG~~v~~~   75 (349)
T TIGR03201         3 MMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGV-------RTNHALPLALGHEISGRVIQAGAGAASW   75 (349)
T ss_pred             eEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCC-------CccCCCCeeccccceEEEEEeCCCcCCC
Confidence            455554 48999999999999999999999999999998764211       0113468999999999999999999887


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCC------CCCccccccch-hhH
Q 017793           98 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD------NVSLEEGAMCE-PLS  170 (366)
Q Consensus        98 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~------~~~~~~aa~~~-~~~  170 (366)
                       +||+|++.+..+|++|.+|..+.+++|+...+.+. ...|+|+||+.++.+.++++|+      ++++++++.+. .+.
T Consensus        76 -~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~  153 (349)
T TIGR03201        76 -IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVT  153 (349)
T ss_pred             -CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHH
Confidence             99999999999999999999999999998766553 3479999999999999999999      88888887664 788


Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCC-cchHHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI-EDVDTDVGKI  249 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~  249 (366)
                      ++|+++.+.++++|++|||+|+|++|++++|+|+..|+ .++++++++++.++++++|++.++++.... .++.+.++++
T Consensus       154 ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~  232 (349)
T TIGR03201       154 TPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAF  232 (349)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhh
Confidence            99999888889999999999999999999999999999 688898999999999999998887754321 2344444444


Q ss_pred             HHhhCCCCc----EEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHH
Q 017793          250 QNAMGSGID----VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFL  324 (366)
Q Consensus       250 ~~~~~~~~d----~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  324 (366)
                      .  .+.++|    ++|||+|+....+.++++++++|+++.+|.......++...++.+..++.+.+.. ..+++++++++
T Consensus       233 t--~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i  310 (349)
T TIGR03201       233 A--KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLV  310 (349)
T ss_pred             c--ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHH
Confidence            3  246776    8999999888888899999999999999976544455555666777888888764 56799999999


Q ss_pred             HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++|++.+.+.++ .|+|  +++++|++.+.+++..||++++.
T Consensus       311 ~~g~i~~~~~i~-~~~l--~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       311 LDGKIQLGPFVE-RRPL--DQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             HcCCCCcccceE-EecH--HHHHHHHHHHHcCCccceEEecC
Confidence            999997776664 6888  99999999999998899999863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=9.1e-47  Score=350.64  Aligned_cols=331  Identities=25%  Similarity=0.363  Sum_probs=265.2

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |+++++..+ ..++++++|.|+|+++||+|||+|+|||++|++.++|.+...     ....+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~-----~~~~~p~i~G~e~~G~V~~vG~~   75 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTA-----PPGEDFLVLGHEALGVVEEVGDG   75 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCC-----CCCCCCeeeccccceEEEEecCC
Confidence            567777744 249999999999999999999999999999999998542111     01235789999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV  171 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~  171 (366)
                       +.|++||||+..+..+|+.|.+|..+++++|+...++  +....+|+|+||+.++++.++++|++++ +.++...++++
T Consensus        76 -~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~  153 (355)
T cd08230          76 -SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSV  153 (355)
T ss_pred             -CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHH
Confidence             9999999999988889999999999999999976543  2223579999999999999999999999 55555556666


Q ss_pred             HHHHHH-------hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHHHcCCceeeecCCCCcc
Q 017793          172 GVHACR-------RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV---DVQRLSIARNLGADETAKVSTDIED  241 (366)
Q Consensus       172 a~~~l~-------~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~---~~~~~~~~~~lg~~~~~~~~~~~~~  241 (366)
                      ++.++.       ....++|++|||+|+|++|++++|+||.+|+ .++++++   +++|.++++++|++. +++..  ++
T Consensus       154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~  229 (355)
T cd08230         154 VEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TP  229 (355)
T ss_pred             HHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cc
Confidence            554442       1236789999999999999999999999999 6887876   678999999999986 34432  33


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--Cceee----chHhhhcCcEEEEeecc-C
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVA----LTPAAAREVDVIGIFRY-R  314 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~~~~~~~~-~  314 (366)
                      +.+ .   .  ...++|+||||+|.+..+..++++++++|+++.+|....  ...++    ...++.+++++.|++.. .
T Consensus       230 ~~~-~---~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~  303 (355)
T cd08230         230 VAE-V---K--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANK  303 (355)
T ss_pred             hhh-h---h--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCch
Confidence            322 1   1  135899999999987788999999999999999997654  22333    24567789999998765 5


Q ss_pred             CChHHHHHHHHCCCC----CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          315 STWPLCIEFLRSGKI----DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       315 ~~~~~~~~~l~~g~~----~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++++++++.++.+    .+.+.++++|++  +++++|++.++++.  +|+++++
T Consensus       304 ~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         304 RHFEQAVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             hhHHHHHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence            679999999998873    246778899999  99999999887653  5999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-46  Score=344.78  Aligned_cols=312  Identities=24%  Similarity=0.341  Sum_probs=267.5

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV  103 (366)
Q Consensus        24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V  103 (366)
                      ..++++++|.|.|+++||+|||.++|+|++|++.+.|.+.        ...+|.++|||++|+|+++|+++++|++||+|
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~--------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V   84 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLP--------VHRPRVTPGHEVVGEVAGRGADAGGFAVGDRV   84 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCC--------CCCCCccCCcceEEEEEEECCCCcccCCCCEE
Confidence            3589999999999999999999999999999998884310        12247899999999999999999999999999


Q ss_pred             EEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHHhCCC
Q 017793          104 ALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANV  181 (366)
Q Consensus       104 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~  181 (366)
                      ++.+. .+|+.|.+|+.+++++|+.+.+++. ..+|+|+||+.++.+.++++|+++++++++.+. .+.+||++++++++
T Consensus        85 ~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~  163 (329)
T TIGR02822        85 GIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASL  163 (329)
T ss_pred             EEcCccCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCC
Confidence            88664 4799999999999999999877653 357999999999999999999999999988665 78899999988889


Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ++|++|||+|+|++|++++|+|+..|+ .|++++++++|.++++++|++.++++...              ...++|+++
T Consensus       164 ~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~--------------~~~~~d~~i  228 (329)
T TIGR02822       164 PPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDT--------------PPEPLDAAI  228 (329)
T ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccccc--------------CcccceEEE
Confidence            999999999999999999999999999 68888899999999999999988764211              023689999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEe
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRF  339 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~  339 (366)
                      ++.+....+..++++++++|+++.+|.... ...++...+..+++++.+++.. ..++.+++++++++++.   .++++|
T Consensus       229 ~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~  305 (329)
T TIGR02822       229 LFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTY  305 (329)
T ss_pred             ECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEE
Confidence            988888899999999999999999997432 2234455566788899888765 45688899999999983   357899


Q ss_pred             cCChhhHHHHHHHHHcCCCceEEEe
Q 017793          340 GFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       340 ~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +|  +++++|++.+.+++..||+|+
T Consensus       306 ~l--~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       306 PL--SEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             eH--HHHHHHHHHHHcCCCceEEEe
Confidence            99  999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.4e-45  Score=343.95  Aligned_cols=350  Identities=77%  Similarity=1.309  Sum_probs=295.3

Q ss_pred             CcccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           11 DKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      +.++++++|+.++..+++++.|.|+++++||+||+.++++|++|+++..+...     +.+...+|.++|+|++|+|+++
T Consensus        14 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~-----~~~~~~~p~~~G~e~~G~V~~v   88 (364)
T PLN02702         14 VEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRC-----ADFVVKEPMVIGHECAGIIEEV   88 (364)
T ss_pred             cccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCC-----ccccCCCCcccccceeEEEEEE
Confidence            55789999999999999999999999999999999999999999988773211     1112235788999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhH
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS  170 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~  170 (366)
                      |+++++|++||+|++.+..+|++|.+|..|..+.|++..+++.....|+|+||+.++.+.++++|+++++++++...+++
T Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (364)
T PLN02702         89 GSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLS  168 (364)
T ss_pred             CCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHHH
Confidence            99999999999999999999999999999999999986555433457999999999999999999999999988655666


Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ++++++...+++++++|||+|+|++|++++|+|+..|+..++++++++++.++++++|++..+++.....++.+.+..+.
T Consensus       169 ~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  248 (364)
T PLN02702        169 VGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQ  248 (364)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHh
Confidence            78888877889999999999999999999999999999778888889999999999999988776544456666665554


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCC
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKID  330 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~  330 (366)
                      ...++++|++||++|+...+..++++|+++|+++.+|........+......+++++.+++.....++.++++++++.+.
T Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  328 (364)
T PLN02702        249 KAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKID  328 (364)
T ss_pred             hhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCC
Confidence            33456899999999977789999999999999999986543333445567788889998876667889999999999986


Q ss_pred             CCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +.+.+.+.|+++++++++|++.+.+++..+|+++.
T Consensus       329 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        329 VKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             chHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            55667788777668999999999998888999985

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=6.3e-46  Score=342.63  Aligned_cols=326  Identities=23%  Similarity=0.333  Sum_probs=256.5

Q ss_pred             cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ..+++++.+|+.++++++|.|. +++||+|||+++|||++|+++++|.+...    .....+|.++|||++|+|+++|.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~----~~~~~~P~i~GhE~~G~V~~~g~~   76 (341)
T cd08237           2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPE----ALKKKLPMALIHEGIGVVVSDPTG   76 (341)
T ss_pred             cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcc----cccCCCCeeccceeEEEEEeeCCC
Confidence            3578888999999999999994 99999999999999999999988532100    001356999999999999998864


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV  173 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~  173 (366)
                        .|++||||++.+..+|+. ..|  +..++|+...+++. ..+|+|+||++++++.++++|+++++++|+.+.++++++
T Consensus        77 --~~~vGdrV~~~~~~~~~~-~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~  150 (341)
T cd08237          77 --TYKVGTKVVMVPNTPVEK-DEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGV  150 (341)
T ss_pred             --ccCCCCEEEECCCCCchh-ccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHH
Confidence              699999999988777763 344  35567877655542 246999999999999999999999999988777889999


Q ss_pred             HHHHh---CCCCCCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          174 HACRR---ANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       174 ~~l~~---~~~~~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +++..   ..+++|++|||.|+|++|++++|+++. .|..+|++++.+++|++++++.+++..++      +       +
T Consensus       151 ~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~  217 (341)
T cd08237         151 HAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------I  217 (341)
T ss_pred             HHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------h
Confidence            98843   457899999999999999999999996 66657999999999999998766542211      1       1


Q ss_pred             HHhhCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHH
Q 017793          250 QNAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLR  325 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  325 (366)
                      .+  ..++|+|||++|+   +..++.++++++++|+++.+|.......++...++.+++++.++... .+++++++++++
T Consensus       218 ~~--~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~  295 (341)
T cd08237         218 PE--DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLS  295 (341)
T ss_pred             hh--ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHH
Confidence            11  2369999999994   45789999999999999999976544455556677899999998765 467899999999


Q ss_pred             CC---CCCCCCceEEEecCC-hhhHHHHHHHHHcCCCceEEEeeC
Q 017793          326 SG---KIDVKPLITHRFGFT-QKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       326 ~g---~~~~~~~~~~~~~l~-~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++   ...+++.+++.|+++ ++++.++++...++ ..||+||++
T Consensus       296 ~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         296 RNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             hCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence            99   334678888999881 23555555555544 689999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.1e-45  Score=338.66  Aligned_cols=329  Identities=23%  Similarity=0.331  Sum_probs=270.4

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      +++++..++ +.+.++++|.|+|+++||+|||.++|+|++|++.+.|.+        ....+|.++|||++|+|+++|++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~--------~~~~~p~i~G~E~~G~Vv~vG~~   81 (357)
T PLN02514         10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDL--------GMSNYPMVPGHEVVGEVVEVGSD   81 (357)
T ss_pred             EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCc--------CcCCCCccCCceeeEEEEEECCC
Confidence            778888888 579999999999999999999999999999999887421        11245889999999999999999


Q ss_pred             CCCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793           94 VKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~  166 (366)
                      +++|++||+|++.+.. +|++|.+|..+++++|++..+..      +....|+|+||+.++.+.++++|+++++++|+.+
T Consensus        82 v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  161 (357)
T PLN02514         82 VSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL  161 (357)
T ss_pred             cccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence            9999999999876543 69999999999999999863321      1124699999999999999999999999999877


Q ss_pred             h-hhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH-HHHHHcCCceeeecCCCCcchH
Q 017793          167 E-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVD  243 (366)
Q Consensus       167 ~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~  243 (366)
                      . .+.+||+++.. ...++|++++|+|+|++|++++|+||..|+ .+++++.++++. ..++++|++.++++..  .   
T Consensus       162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--~---  235 (357)
T PLN02514        162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD--A---  235 (357)
T ss_pred             hhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC--h---
Confidence            5 67888998865 445799999999999999999999999999 466666666555 4556799987765322  1   


Q ss_pred             HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHH
Q 017793          244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIE  322 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  322 (366)
                      ..+.+.    ..++|++|||+|....+..++++++++|+++.+|.......+....+..++.++.+++.. ..+++++++
T Consensus       236 ~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  311 (357)
T PLN02514        236 AEMQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLE  311 (357)
T ss_pred             HHHHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHH
Confidence            223332    247999999999777889999999999999999976544455566677888999998766 447899999


Q ss_pred             HHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          323 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       323 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++|++  ++.+ +.|+|  +++.+|++.+.++...||+++.+
T Consensus       312 ~~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        312 FCKEKGL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             HHHhCCC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence            9999987  5555 57898  99999999999998889999864

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-44  Score=333.88  Aligned_cols=335  Identities=27%  Similarity=0.526  Sum_probs=279.8

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      ||++++.+++.++++++|.|.|+++|++||+.++++|++|++...|..        .....|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~--------~~~~~p~i~G~e~~G~V~~vG~~v   72 (339)
T PRK10083          1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHN--------PFAKYPRVIGHEFFGVIDAVGEGV   72 (339)
T ss_pred             CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCC--------CcCCCCcccccceEEEEEEECCCC
Confidence            578888888999999999999999999999999999999998877321        012458899999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH  174 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~  174 (366)
                      +.|++||+|++.+..+|+.|.+|..+++++|+++.+++. ..+|+|+||+.++.+.++++|+++++++++...++.+++.
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~  151 (339)
T PRK10083         73 DAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAAN  151 (339)
T ss_pred             ccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHH
Confidence            999999999999999999999999999999998776543 3479999999999999999999999988875557778887


Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ++...++++|++|||+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++..  .++.+.+..    .
T Consensus       152 ~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~  225 (339)
T PRK10083        152 VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----K  225 (339)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----C
Confidence            6677889999999999999999999999996 69977888999999999999999998877543  344444421    1


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCC
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP  333 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~  333 (366)
                      +.++|++||++|++..+..++++|+++|+++.+|............+..+.+++.+.....+.+++++++++++.+.+..
T Consensus       226 g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~  305 (339)
T PRK10083        226 GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEK  305 (339)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHH
Confidence            34567999999987789999999999999999986543333333344556777777665567899999999999996544


Q ss_pred             ceEEEecCChhhHHHHHHHHHcC-CCceEEEeeC
Q 017793          334 LITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL  366 (366)
Q Consensus       334 ~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi~~  366 (366)
                      .+++.|++  +++++|++.+.++ ...+|+++++
T Consensus       306 ~~~~~~~l--~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        306 LITHTFDF--QHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             heeeeecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence            57788998  9999999999865 4578999864

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=5.2e-44  Score=333.14  Aligned_cols=336  Identities=32%  Similarity=0.548  Sum_probs=280.0

Q ss_pred             eEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEEEEEeCCC
Q 017793           16 MAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        16 ~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |++++.+++ .+++++.|.|.|+++||+|||.++++|++|+....|.         .+ ..+|.++|+|++|+|+++|++
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~---------~~~~~~p~~~G~e~~G~V~~vG~~   72 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGR---------RPRVPLPIILGHEGVGRVVALGGG   72 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCC---------CCCCCCCcccccCCceEEEEeCCC
Confidence            677888775 8999999999999999999999999999999888742         22 456889999999999999999


Q ss_pred             CCC------CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC------CCCCcceEEEEecCC-ceEECCCCCCc
Q 017793           94 VKS------LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVVHPAK-LCYKLPDNVSL  160 (366)
Q Consensus        94 v~~------~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~~~~~-~~~~~P~~~~~  160 (366)
                      ++.      |++||+|++.+..+|++|.+|+.++++.|+...+++..      ...|+|+||+.++++ .++++|++++.
T Consensus        73 v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~  152 (361)
T cd08231          73 VTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPD  152 (361)
T ss_pred             ccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCH
Confidence            986      99999999999899999999999999999987665531      246999999999986 79999999998


Q ss_pred             cccccc-hhhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793          161 EEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD  238 (366)
Q Consensus       161 ~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  238 (366)
                      ++++++ .++.+||+++.+ ...+++++|||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++...
T Consensus       153 ~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~  232 (361)
T cd08231         153 EVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDEL  232 (361)
T ss_pred             HHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCccc
Confidence            888877 588999999966 445699999999999999999999999999668888899999999999999888775432


Q ss_pred             C-cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEEEeecc-C
Q 017793          239 I-EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-R  314 (366)
Q Consensus       239 ~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-~  314 (366)
                      . .++...+.++.  .+.++|++|||+|+...+..++++++++|+++.+|.....  ..++...++.+++++.+++.. .
T Consensus       233 ~~~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (361)
T cd08231         233 PDPQRRAIVRDIT--GGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDP  310 (361)
T ss_pred             ccHHHHHHHHHHh--CCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCc
Confidence            1 11223343332  3568999999999877888999999999999999865432  233334567888999888765 6


Q ss_pred             CChHHHHHHHHCC--CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          315 STWPLCIEFLRSG--KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       315 ~~~~~~~~~l~~g--~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++++++++++.++  .+.+.+.++++|++  +++++|++.++++. .+|++|+
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~  360 (361)
T cd08231         311 SHLYRAVRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVID  360 (361)
T ss_pred             hhHHHHHHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeC
Confidence            6899999999998  55567778899999  99999999998876 5899986

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=2.3e-44  Score=327.58  Aligned_cols=306  Identities=20%  Similarity=0.271  Sum_probs=247.3

Q ss_pred             cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeec-cchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGIC-GSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~-~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      +++++++.+++.+++++.|.|+|+++||+|||.++||| .+|++++.|.+...     ....+|.++|||++|+|+++|+
T Consensus         1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~-----~~~~~P~i~GhE~~G~V~~vG~   75 (308)
T TIGR01202         1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPF-----PGMGYPLVPGYESVGRVVEAGP   75 (308)
T ss_pred             CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCC-----CCCCCCccCcceeEEEEEEecC
Confidence            47888898888999999999999999999999999997 69998887532110     0125699999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHH
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG  172 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a  172 (366)
                      ++ +|++||||++.+    ..|..|.               ....|+|+||++++++.++++|++++++. +.+.+.++|
T Consensus        76 ~v-~~~vGdrV~~~~----~~c~~~~---------------~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a  134 (308)
T TIGR01202        76 DT-GFRPGDRVFVPG----SNCYEDV---------------RGLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATA  134 (308)
T ss_pred             CC-CCCCCCEEEEeC----ccccccc---------------cccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHH
Confidence            98 599999998732    1222211               01369999999999999999999999764 555567899


Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      |++++... .+++++||+|+|++|++++|+||.+|++.|++++.+++|.+.++++   .++++..   .           
T Consensus       135 ~~~~~~~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------  196 (308)
T TIGR01202       135 RHAVAGAE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------  196 (308)
T ss_pred             HHHHHhcc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------
Confidence            99987653 4689999999999999999999999997788888888887766543   2333211   0           


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCC
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV  331 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~  331 (366)
                      .+.++|++|||+|+...++.++++++++|+++.+|.......++...++.+++++.++..+ .++++++++++++|++.+
T Consensus       197 ~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~  276 (308)
T TIGR01202       197 PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSL  276 (308)
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCCh
Confidence            1467999999999887889999999999999999976544455566677788888887765 567999999999999988


Q ss_pred             CCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          332 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       332 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      .+.+++.|+|  +++++|++.+.++...+|++++
T Consensus       277 ~~~it~~~~l--~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       277 DGLITHQRPA--SDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             hhccceeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence            8889999999  9999999998877778999974

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=9.8e-44  Score=335.76  Aligned_cols=334  Identities=22%  Similarity=0.331  Sum_probs=264.6

Q ss_pred             ccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhh-hhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHF-KVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~-~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      +.|+++++.++..++++++|.|+|+++||+|||.++|||++|++.+ .|..... . ......+|.++|||++|+|+++|
T Consensus         1 m~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~-~-~~~~~~~p~i~GhE~~G~V~~vG   78 (410)
T cd08238           1 MKTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKK-V-PNDLAKEPVILGHEFAGTILKVG   78 (410)
T ss_pred             CCcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCcccc-C-cccccCCCceeccccEEEEEEeC
Confidence            3588999999989999999999999999999999999999999876 3321100 0 00012468899999999999999


Q ss_pred             CCCC-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC----ceEECCCCCCccccccc
Q 017793           92 SEVK-SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        92 ~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~----~~~~~P~~~~~~~aa~~  166 (366)
                      ++++ +|++||||++.+...|+.|..|.        .+   + ...+|+|+||++++.+    .++++|+++++++|+.+
T Consensus        79 ~~v~~~~~vGdrV~~~~~~~c~~~~~c~--------~~---g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~  146 (410)
T cd08238          79 KKWQGKYKPGQRFVIQPALILPDGPSCP--------GY---S-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLV  146 (410)
T ss_pred             CCccCCCCCCCEEEEcCCcCCCCCCCCC--------Cc---c-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhc
Confidence            9998 69999999998887888776652        11   1 1247999999999987    58999999999999866


Q ss_pred             hhhHHH---HHHH---------HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCC--CCeEEEEcCChhHHHHHHHc----
Q 017793          167 EPLSVG---VHAC---------RRANVGPETNVMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARNL----  227 (366)
Q Consensus       167 ~~~~~a---~~~l---------~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~l----  227 (366)
                      .+++++   +.++         +++++++|++|+|+| +|++|++++|+|+.+|  +.+|++++.+++|.++++++    
T Consensus       147 epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~  226 (410)
T cd08238         147 EPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPE  226 (410)
T ss_pred             chHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhcccc
Confidence            443332   3222         346789999999997 7999999999999975  45799999999999999997    


Q ss_pred             ----CCc-eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc-CC--CceeechH
Q 017793          228 ----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-KT--EMTVALTP  299 (366)
Q Consensus       228 ----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~  299 (366)
                          |++ .++++.. ..++.+.++++.  .+.++|++||++|.+..+..++++++++|+++.++.. ..  ...++...
T Consensus       227 ~~~~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~  303 (410)
T cd08238         227 AASRGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYN  303 (410)
T ss_pred             ccccCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHH
Confidence                665 3454322 245666665553  3568999999999888899999999999988776432 21  23455567


Q ss_pred             hhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          300 AAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       300 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +..+++++.|++.. ..+++++++++++|++++.+.++++|+|  +++++|++.+. ++..||+|+..
T Consensus       304 ~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         304 VHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             hhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEEC
Confidence            78899999998765 5679999999999999888899999999  99999999999 77889999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.8e-43  Score=326.84  Aligned_cols=344  Identities=29%  Similarity=0.534  Sum_probs=282.7

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccc-cCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC-ANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~-~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||+++++++.++++++.|.|+++++||+||+.++++|+.|+.+..|........ ......+|.++|+|++|+|+++|++
T Consensus         1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~   80 (350)
T cd08256           1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG   80 (350)
T ss_pred             CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence            688999988889999999999999999999999999999999887532100000 0000246778999999999999999


Q ss_pred             CC--CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC-CCCCCcceEEEEecCC-ceEECCCCCCccccccchhh
Q 017793           94 VK--SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-PPTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMCEPL  169 (366)
Q Consensus        94 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~e~~~~~~~-~~~~~P~~~~~~~aa~~~~~  169 (366)
                      ++  +|++||+|++.+..+|+.|.+|..+....|+...+++. ....|+|+||+.++++ .++++|+++++++++.+.++
T Consensus        81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~  160 (350)
T cd08256          81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL  160 (350)
T ss_pred             cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence            99  89999999999999999999999999999987655443 1257999999999988 67999999999888877788


Q ss_pred             HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .++|++++..+++++++|||.|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++.  ..++...+.++
T Consensus       161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~  238 (350)
T cd08256         161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKEL  238 (350)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHH
Confidence            8999988778899999999988999999999999999997788999999999999999998876643  34566666554


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHh-hhcCcEEEEeeccCCChHHHHHHHHCCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA-AAREVDVIGIFRYRSTWPLCIEFLRSGK  328 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~  328 (366)
                      .  .+.++|++||++|+...+..++++++++|+++.+|........+...+ ..+++++.++......+++++++++++.
T Consensus       239 ~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~  316 (350)
T cd08256         239 T--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGR  316 (350)
T ss_pred             h--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCC
Confidence            3  356799999999976678889999999999999986543333333322 3456777777666677999999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          329 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       329 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +.+.+.+.+.|++  +++++|++.++++...+|+++
T Consensus       317 l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         317 LPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             CChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence            9655456788999  999999999999988899875

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.9e-43  Score=326.00  Aligned_cols=338  Identities=27%  Similarity=0.369  Sum_probs=276.9

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      ||++++.+++.+++++.|.|.+.++||+|||.++++|++|++...+.+        .....|.++|||++|+|+++|+++
T Consensus         1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~--------~~~~~~~~~G~e~~G~V~~vG~~v   72 (351)
T cd08285           1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGA--------PGERHGMILGHEAVGVVEEVGSEV   72 (351)
T ss_pred             CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCC--------CCCCCCcccCcceEEEEEEecCCc
Confidence            688999888889999999999999999999999999999998776321        113458899999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc--ccCCCCCCCcceEEEEecCC--ceEECCCCCCccccccch-hh
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR--FFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PL  169 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~~  169 (366)
                      ++|++||+|++.+..+|++|..|..|+++.|+...  +.-.....|+|+||+.++.+  .++++|+++++++++.+. .+
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~  152 (351)
T cd08285          73 KDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM  152 (351)
T ss_pred             CccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence            99999999999888899999999999999998742  11112247999999999974  899999999999998774 78


Q ss_pred             HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .+|++++...+++++++|||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++..  .++...+.++
T Consensus       153 ~ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~  230 (351)
T cd08285         153 STGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKL  230 (351)
T ss_pred             hhHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHH
Confidence            88999887788999999999999999999999999999977899999999999999999988877543  4565665554


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech--H--hhhcCcEEEEeecc--CCChHHHHHH
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT--P--AAAREVDVIGIFRY--RSTWPLCIEF  323 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~--~~~~~~~~~~~~~~--~~~~~~~~~~  323 (366)
                      .  .+.++|++|||+|+...+..++++|+++|+++.+|...........  .  ...+..++.+.+..  .+++++++++
T Consensus       231 ~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  308 (351)
T cd08285         231 T--GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASL  308 (351)
T ss_pred             h--CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHH
Confidence            3  3568999999999877889999999999999999865532222211  1  22344556655432  5689999999


Q ss_pred             HHCCCCCCCC-ceEEEecCChhhHHHHHHHHHcCC-CceEEEeeC
Q 017793          324 LRSGKIDVKP-LITHRFGFTQKEIEDAFEISAQGG-NAIKVMFNL  366 (366)
Q Consensus       324 l~~g~~~~~~-~~~~~~~l~~~~~~~a~~~~~~~~-~~gkvvi~~  366 (366)
                      +++|++.+.. ...+.|++  +++++|++.+.++. ..+|++|++
T Consensus       309 ~~~g~i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         309 IEYGRVDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             HHcCCCChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence            9999996633 34456888  99999999999886 478999874

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.5e-42  Score=323.91  Aligned_cols=337  Identities=26%  Similarity=0.432  Sum_probs=274.7

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      +|++|+..+ +.++++++|.|++.++||+||+.++|+|++|++...|.         ....+|.++|||++|+|+++|++
T Consensus         8 ~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~---------~~~~~p~v~G~e~~G~V~~vG~~   78 (373)
T cd08299           8 CKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGK---------LVTPFPVILGHEAAGIVESVGEG   78 (373)
T ss_pred             eEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCC---------CCCCCCccccccceEEEEEeCCC
Confidence            788888865 57899999999999999999999999999999988742         22346889999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCcceEEEEecCCceEE
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYK  153 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~e~~~~~~~~~~~  153 (366)
                      ++.|++||+|++.+..+||+|.+|..++++.|+.....+.                    ....|+|+||++++.+.+++
T Consensus        79 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~  158 (373)
T cd08299          79 VTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAK  158 (373)
T ss_pred             CccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceee
Confidence            9999999999999889999999999999999997653210                    00368999999999999999


Q ss_pred             CCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          154 LPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       154 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      +|+++++++++.+. .+.+||+++ ..++++++++|||+|+|++|++++++|+..|+..|+++++++++.+.++++|++.
T Consensus       159 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~  238 (373)
T cd08299         159 IDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATE  238 (373)
T ss_pred             CCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce
Confidence            99999999998876 788899886 5688999999999999999999999999999967888889999999999999988


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhh-cCCceEEEEcccCCCceeechH-hhhcCcEEEE
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT-RPGGKVCLIGLAKTEMTVALTP-AAAREVDVIG  309 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~  309 (366)
                      +++......++...+.++.   ++++|+++||+|++..+..++..+ .++|+++.+|............ .+.++.++.+
T Consensus       239 ~i~~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~  315 (373)
T cd08299         239 CINPQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKG  315 (373)
T ss_pred             EecccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEE
Confidence            8775433333555555543   358999999999866777766655 6799999998654322233222 2345677777


Q ss_pred             eecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          310 IFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       310 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++..    ...+.++++++.++.+.+.+.+++.|++  +++.+|++.+++++. .|+++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         316 AVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             EEecCCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence            6543    2467778888888877767778899999  999999999987754 5888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-42  Score=320.70  Aligned_cols=329  Identities=23%  Similarity=0.384  Sum_probs=279.1

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |+++++.++ +.++++++|.|+++++||+||+.++++|++|+..+.|..        .....|.++|||++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~--------~~~~~p~~~g~e~~G~v~~vG~~   72 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAM--------PGLSYPRVPGHEVVGRIDAVGEG   72 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCC--------CCCCCCcccCcceeEEEEEECCC
Confidence            689999988 689999999999999999999999999999998887421        01345789999999999999999


Q ss_pred             CCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           94 VKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        94 v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      ++.|++||+|++.+ ...|++|.+|..|+++.|++..+.+. ...|+|+||+.++.+.++++|+++++++++.+. .+.+
T Consensus        73 v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t  151 (333)
T cd08296          73 VSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT  151 (333)
T ss_pred             CccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence            99999999999865 35799999999999999998765543 346999999999999999999999998888665 7788


Q ss_pred             HHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ||++++...++++++|||+|+|++|++++|+|+.+|+ .++++++++++.++++++|++.++++..  .++...+..+  
T Consensus       152 a~~~~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~--  226 (333)
T cd08296         152 TFNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL--  226 (333)
T ss_pred             HHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc--
Confidence            8988877789999999999999999999999999999 6888888999999999999988877533  3455544432  


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID  330 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  330 (366)
                         +++|+++|+.|....+..++++++++|+++.+|......+++...++.+++++.+.... ..++++++++++++.+ 
T Consensus       227 ---~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l-  302 (333)
T cd08296         227 ---GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGV-  302 (333)
T ss_pred             ---CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCC-
Confidence               46999999997677889999999999999999876544445555566889999998754 5678889999998887 


Q ss_pred             CCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                       ++.+ +.|++  +++.+|++.+.+++..||+|++
T Consensus       303 -~~~v-~~~~~--~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         303 -RPMV-ETFPL--EKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             -CceE-EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence             4444 67888  9999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.5e-42  Score=321.12  Aligned_cols=338  Identities=52%  Similarity=0.953  Sum_probs=281.3

Q ss_pred             EEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCC
Q 017793           17 AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   96 (366)
Q Consensus        17 ~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   96 (366)
                      +.|+.+++.+++++.|.|.+.++||+|||.++++|+.|++.+.+..     .+......|.++|+|++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~-----~~~~~~~~~~~~g~e~~G~V~~vG~~v~~   75 (343)
T cd05285           1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGR-----IGDFVVKEPMVLGHESAGTVVAVGSGVTH   75 (343)
T ss_pred             CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCC-----CcccCCCCCcccCcceeEEEEeeCCCCCC
Confidence            4678888999999999999999999999999999999998664110     01112235778999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHHHH
Q 017793           97 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC  176 (366)
Q Consensus        97 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l  176 (366)
                      |++||+|++.+..+|+.|.+|..|+..+|+++.+++.....|+|++|++++++.++++|+++++++|+.+.++.+|++++
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~  155 (343)
T cd05285          76 LKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHAC  155 (343)
T ss_pred             CCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHH
Confidence            99999999999999999999999999999986554433457999999999999999999999999998777788898888


Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcc---hHHHHHHHHHhh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED---VDTDVGKIQNAM  253 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~~~~~~~~~  253 (366)
                      +.+++++++++||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++..  .+   +...+.+..  .
T Consensus       156 ~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~--~  231 (343)
T cd05285         156 RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL--G  231 (343)
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHh--C
Confidence            7899999999999998999999999999999965888888899999999999998877543  23   244454432  3


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCC
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP  333 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~  333 (366)
                      ++++|++|||+|+...++.++++++++|+++.+|........+.....++.+++.+.....+.+++++++++++.+.+.+
T Consensus       232 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  311 (343)
T cd05285         232 GKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKP  311 (343)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchH
Confidence            56799999999976688999999999999999986544333344466778888888776667889999999999875445


Q ss_pred             ceEEEecCChhhHHHHHHHHHcCC-CceEEEee
Q 017793          334 LITHRFGFTQKEIEDAFEISAQGG-NAIKVMFN  365 (366)
Q Consensus       334 ~~~~~~~l~~~~~~~a~~~~~~~~-~~gkvvi~  365 (366)
                      .+.+.|++  +++.+|++.+.+++ ..+|++|.
T Consensus       312 ~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         312 LITHRFPL--EDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             hEEEEEeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence            56788888  99999999999885 46999974

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=6.5e-42  Score=319.07  Aligned_cols=334  Identities=28%  Similarity=0.443  Sum_probs=274.1

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        13 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ++||++++.++ ..+++++.|.|.++++||+|||.++|+|++|+++..|.         .+..+|.++|+|++|+|+++|
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~---------~~~~~p~v~G~e~~G~V~~vG   71 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGG---------LPTPLPAVLGHEGAGVVEAVG   71 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCC---------CCCCCCcccccceeEEEEEeC
Confidence            47899999975 67899999999999999999999999999999988732         223468899999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC----------------------CCCCCcceEEEEecCC
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----------------------PPTNGSLAHKVVHPAK  149 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~e~~~~~~~  149 (366)
                      +++++|++||+|++.+. .|++|.+|..+..++|++..-...                      ....|+|+||++++++
T Consensus        72 ~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~  150 (365)
T cd08278          72 SAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHER  150 (365)
T ss_pred             CCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecch
Confidence            99999999999999764 899999999999999987532110                      1135899999999999


Q ss_pred             ceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793          150 LCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  227 (366)
Q Consensus       150 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  227 (366)
                      .++++|+++++++++.+. .+.+|+.++ +...++++++|||+|+|++|++++|+|+..|++.++++++++++.++++++
T Consensus       151 ~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~  230 (365)
T cd08278         151 NVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKEL  230 (365)
T ss_pred             hEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHc
Confidence            999999999999888775 778888876 457899999999999999999999999999997799999999999999999


Q ss_pred             CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC--CCceeechHhhhcCc
Q 017793          228 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAAAREV  305 (366)
Q Consensus       228 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~  305 (366)
                      |++.++++..  .++.+.+.+..   +.++|+++||+|....+..++++++++|+++.+|...  ....++...+..++.
T Consensus       231 g~~~~i~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  305 (365)
T cd08278         231 GATHVINPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGK  305 (365)
T ss_pred             CCcEEecCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCc
Confidence            9988876532  45655555443   5689999999997778899999999999999998653  223344444556778


Q ss_pred             EEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          306 DVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       306 ~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++.++...    .+.+++++++++++.+.+.+.+ ..|++  +++++|++.+.++.. -|++++
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l--~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         306 TIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPF--EDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             eEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence            87776533    3457889999999988432333 57888  999999999998765 488774

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=8.2e-42  Score=318.38  Aligned_cols=333  Identities=28%  Similarity=0.477  Sum_probs=275.3

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        16 ~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      +++|+... ..+++++.|.|.+++++|+||+.++++|++|++...+         .....+|.++|||++|+|+++|+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g---------~~~~~~~~i~g~e~~G~V~~vG~~v   72 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDG---------KLPTPLPVILGHEGAGIVESIGPGV   72 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcC---------CCCCCCCcccccceeEEEEEeCCCc
Confidence            57778755 5899999999999999999999999999999988873         3334567899999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCC--------------------CCCcceEEEEecCCceEEC
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP--------------------TNGSLAHKVVHPAKLCYKL  154 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~e~~~~~~~~~~~~  154 (366)
                      +++++||+|++.+..+|+.|.+|..+++++|+...+++...                    ..|+|+||++++++.++++
T Consensus        73 ~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  152 (365)
T cd05279          73 TTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKI  152 (365)
T ss_pred             ccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEEC
Confidence            99999999999988899999999999999998866542110                    2479999999999999999


Q ss_pred             CCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee
Q 017793          155 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET  232 (366)
Q Consensus       155 P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  232 (366)
                      |+++++++++.+. .+.+||+++ +.++++++++|||+|+|++|++++|+|+..|+..++++++++++.++++++|++.+
T Consensus       153 P~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~  232 (365)
T cd05279         153 DPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATEC  232 (365)
T ss_pred             CCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCee
Confidence            9999999998776 788899886 55889999999999999999999999999999778888889999999999999887


Q ss_pred             eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhc-CCceEEEEcccC--CCceeechHhhhcCcEEEE
Q 017793          233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR-PGGKVCLIGLAK--TEMTVALTPAAAREVDVIG  309 (366)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~  309 (366)
                      ++......++.+.+.++.   ++++|++||++|....+..++++++ ++|+++.+|...  ....+....+ .+..++.+
T Consensus       233 v~~~~~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g  308 (365)
T cd05279         233 INPRDQDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKG  308 (365)
T ss_pred             cccccccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEE
Confidence            765332114555555443   4689999999987678899999999 999999998653  2333444444 56677777


Q ss_pred             eec----cCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          310 IFR----YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       310 ~~~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      .+.    ..+.+++++++++++.+.+.+..+++|++  +++++|++.+++++. .|+++
T Consensus       309 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~  364 (365)
T cd05279         309 TVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTIL  364 (365)
T ss_pred             EeccCCchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeee
Confidence            643    25678899999999999766678888999  999999999988755 46665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.3e-41  Score=319.03  Aligned_cols=338  Identities=32%  Similarity=0.499  Sum_probs=276.8

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |+++++.+++.++++++|.|+| ++++|+||+.++++|++|+..+.|.+.        ..++|.++|+|++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--------~~~~p~~~G~e~~G~V~~vG~~   72 (386)
T cd08283           1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIP--------GMKKGDILGHEFMGVVEEVGPE   72 (386)
T ss_pred             CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCC--------CCCCCccccccceEEEEEeCCC
Confidence            6788888888999999999998 599999999999999999998874321        1245889999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccC---------------C----CCCCCcceEEEEecCC--ceE
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---------------S----PPTNGSLAHKVVHPAK--LCY  152 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~g~~~e~~~~~~~--~~~  152 (366)
                      ++++++||+|++.+...||+|.+|..+.+.+|+++....               .    ....|+|+||++++.+  .++
T Consensus        73 v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~  152 (386)
T cd08283          73 VRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPF  152 (386)
T ss_pred             CCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEE
Confidence            999999999999988899999999999999998754221               0    0136999999999988  899


Q ss_pred             ECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          153 KLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       153 ~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      ++|+++++++|+.+. .+.+||++++..+++++++|||+|+|++|++++++|+..|+.+++++++++++.+++++++...
T Consensus       153 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~  232 (386)
T cd08283         153 KIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE  232 (386)
T ss_pred             ECCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence            999999999998775 7889999997788999999999999999999999999999866999999999999999985445


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh---------------------HHHHHHHHhhcCCceEEEEcccC
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------------KTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      ++++... .++...+..+.  .++++|++||++|+.                     ..++.++++++++|+++.+|...
T Consensus       233 vi~~~~~-~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~  309 (386)
T cd08283         233 TINFEEV-DDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYG  309 (386)
T ss_pred             EEcCCcc-hHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCC
Confidence            5554321 13555555443  245799999999753                     36788999999999999998654


Q ss_pred             CC-ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCC-CceEEEee
Q 017793          291 TE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFN  365 (366)
Q Consensus       291 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~-~~gkvvi~  365 (366)
                      .. ........+.++.++.+.... .+.+++++++++++++.+.+.+++.|++  +++++|++.+.++. ..+|+||+
T Consensus       310 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         310 GTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             CCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEec
Confidence            32 223333456777787776544 5578899999999999665567788888  99999999998886 56899986

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=2.3e-41  Score=313.43  Aligned_cols=334  Identities=31%  Similarity=0.533  Sum_probs=275.5

Q ss_pred             ceEEEEeeCCceEEEEecCCCCC-CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~-~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |+++++..+..++++++|+|+|. ++||+||+.++++|+.|+....|         .....+|.++|+|++|+|+++|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g---------~~~~~~~~~~g~e~~G~V~~vG~~   71 (344)
T cd08284           1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRG---------HIPSTPGFVLGHEFVGEVVEVGPE   71 (344)
T ss_pred             CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcC---------CCCCCCCcccccceEEEEEeeCCC
Confidence            57788887788999999999985 99999999999999999988773         222345788999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccC---CCCCCCcceEEEEecCC--ceEECCCCCCccccccch-
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---SPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-  167 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-  167 (366)
                      ++++++||+|++.+..+|+.|.+|..++...|++...++   ....+|+|++|+.++.+  .++++|+++++++++.+. 
T Consensus        72 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~  151 (344)
T cd08284          72 VRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGD  151 (344)
T ss_pred             ccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcC
Confidence            999999999999988999999999999999998865552   22346999999999965  999999999999888765 


Q ss_pred             hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      .+.+||+++...+++++++|||+|+|++|++++|+|+..|+..++++++++++.++++++|+.. ++.  ...++...+.
T Consensus       152 ~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~~l~  228 (344)
T cd08284         152 ILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEPVERVR  228 (344)
T ss_pred             chHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCHHHHHH
Confidence            8899999997788899999999999999999999999999756888888889999999999753 333  3345666665


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeec-cCCChHHHHHHHH
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFR-YRSTWPLCIEFLR  325 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~  325 (366)
                      ++.  .+.++|++||++++.......+++++++|+++.+|.... .........+.++.++.+... ..+.++++++++.
T Consensus       229 ~~~--~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (344)
T cd08284         229 EAT--EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLE  306 (344)
T ss_pred             HHh--CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHH
Confidence            543  356899999999987788999999999999999986652 222333345566777665432 2668999999999


Q ss_pred             CCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       326 ~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++.+.+.+.+.+.+++  ++++++++.+.++.. +|+|++
T Consensus       307 ~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         307 SGRLDLEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             cCCCChHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence            9998655556778888  999999999998877 999985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.7e-41  Score=319.54  Aligned_cols=347  Identities=21%  Similarity=0.237  Sum_probs=279.7

Q ss_pred             CcccceEEEEeeC------CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhccccccc-ccCcc-CCCCcccccc
Q 017793           11 DKNQNMAAWLLGI------KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR-CANFI-VKKPMVIGHE   82 (366)
Q Consensus        11 ~~~~~~~~~~~~~------~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~-~~~~~-~~~p~i~G~e   82 (366)
                      .|.+|++.++..+      ..++++++|.|.++++||+||+.++++|++|++...|.+..... ..... ...+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            5778899888522      25788999999999999999999999999999887643211000 00001 1223589999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc
Q 017793           83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE  162 (366)
Q Consensus        83 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~  162 (366)
                      ++|+|+++|++++.|++||+|++.+...|+.|..|..+..++|+...+++.....|+|+||++++...++++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999999999999999999999999999888887766689999999999999999999999999


Q ss_pred             cccch-hhHHHHHHHHh---CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          163 GAMCE-PLSVGVHACRR---ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       163 aa~~~-~~~~a~~~l~~---~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      ++.+. .+.+||+++..   ++++++++|||+|+ |++|++++++|+.+|+ .++++++++++.++++++|++.++++..
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~  247 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRD  247 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            88665 78899998743   67899999999995 9999999999999999 5667778899999999999998877533


Q ss_pred             CC--------------------cchHHHHHHHHHhhCC-CCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-Ccee
Q 017793          238 DI--------------------EDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTV  295 (366)
Q Consensus       238 ~~--------------------~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~  295 (366)
                      ..                    ..+.+.+.++.  .+. ++|++||++|+ ..+..++++++++|+++.+|.... ...+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  324 (393)
T cd08246         248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTGYNHTY  324 (393)
T ss_pred             cccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCCCCCCC
Confidence            21                    12334444433  244 79999999996 578889999999999999986433 2234


Q ss_pred             echHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcC-CCceEEEee
Q 017793          296 ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFN  365 (366)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi~  365 (366)
                      ....+..++.++.+.+.. .+.+++++++++++.+  .+.++++|++  ++++++++.+.++ ...||+++-
T Consensus       325 ~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         325 DNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             cHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence            445566777788877655 3578899999999988  4557788999  9999999999999 788999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.3e-41  Score=311.76  Aligned_cols=334  Identities=37%  Similarity=0.682  Sum_probs=273.8

Q ss_pred             EEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017793           19 WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   98 (366)
Q Consensus        19 ~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   98 (366)
                      |+++++.+.+++.|+|.++++||+||+.++++|++|+.......     .+.....+|.++|+|++|+|+++|+++++|+
T Consensus         2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~-----~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~   76 (339)
T cd08232           2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGG-----FGTVRLREPMVLGHEVSGVVEAVGPGVTGLA   76 (339)
T ss_pred             eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCC-----CCcccccCCeecCccceEEEEeeCCCCCcCC
Confidence            67788999999999999999999999999999999997653110     0111124577899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC----CCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793           99 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH  174 (366)
Q Consensus        99 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~  174 (366)
                      +||+|++.+..+|++|.+|..|..+.|+.+.+++.    ....|+|+||+.++.+.++++|+++++++|+...++.+||+
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~  156 (339)
T cd08232          77 PGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALH  156 (339)
T ss_pred             CCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHH
Confidence            99999999999999999999999999998765542    12579999999999999999999999999887668888999


Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.+....++++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|++.++++..  .+    +.++.. ..
T Consensus       157 ~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~----~~~~~~-~~  229 (339)
T cd08232         157 AVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DP----LAAYAA-DK  229 (339)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hh----hhhhhc-cC
Confidence            886644448999999989999999999999999866888888888889999999988877543  22    222221 24


Q ss_pred             CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCCc
Q 017793          255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL  334 (366)
Q Consensus       255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~  334 (366)
                      .++|+++|+.|+...++.++++|+++|+++.+|............+..+++++.+.......+++++++++++.+.+.+.
T Consensus       230 ~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  309 (339)
T cd08232         230 GDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPL  309 (339)
T ss_pred             CCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhh
Confidence            56999999999766788999999999999998754422222333345677788777666667899999999999876666


Q ss_pred             eEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          335 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       335 ~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.+.|++  ++++++++.+.++...||+|+++
T Consensus       310 ~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         310 ITAVFPL--EEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             eeEEecH--HHHHHHHHHHHhCCCceeEEEeC
Confidence            7788888  99999999999888899999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2.6e-41  Score=313.46  Aligned_cols=337  Identities=31%  Similarity=0.524  Sum_probs=276.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.+++.+++.+.|.|.| .+++|+||+.++++|++|+.+..|.+.        ..++|.++|+|++|+|+++|++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--------~~~~~~~~g~e~~G~V~~vG~~   72 (347)
T cd05278           1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVP--------GAKHGMILGHEFVGEVVEVGSD   72 (347)
T ss_pred             CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC--------CCCCCceeccceEEEEEEECCC
Confidence            5788888888899999999999 999999999999999999988773221        1455789999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccC--CCCCCCcceEEEEecCC--ceEECCCCCCccccccch-h
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG--SPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~  168 (366)
                      +++|++||+|++.+..+||.|.+|..|..++|++.....  .....|+|+||++++++  .++++|+++++++|+.++ .
T Consensus        73 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~  152 (347)
T cd05278          73 VKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDI  152 (347)
T ss_pred             ccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcch
Confidence            999999999999999999999999999999999865332  12347999999999987  999999999999998875 7


Q ss_pred             hHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          169 LSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       169 ~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +.+||+++...+++++++|||.|+|++|++++|+|+..|...++++++++++.++++++|++.++++..  .++...+..
T Consensus       153 ~~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~  230 (347)
T cd05278         153 LPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILE  230 (347)
T ss_pred             hhheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHH
Confidence            889999887788999999999888999999999999999757888888889999999999988877543  345555554


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech-HhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY-RSTWPLCIEFLRS  326 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  326 (366)
                      +.  .++++|++||++++...+..++++|+++|+++.+|........... ..+.++.++.+.... .+.++++++++++
T Consensus       231 ~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (347)
T cd05278         231 LT--GGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEE  308 (347)
T ss_pred             Hc--CCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHc
Confidence            43  3468999999999866889999999999999999854432211111 223455666654333 4678899999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHHcCCC-ceEEEee
Q 017793          327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN  365 (366)
Q Consensus       327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi~  365 (366)
                      +.+.+.+.....|++  ++++++++.+..+.. .+|++++
T Consensus       309 ~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         309 GKIDPSKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             CCCChhHcEEEEecH--HHHHHHHHHHhcCCCCceEEEec
Confidence            999654445678888  999999999988876 7899886

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4e-41  Score=311.42  Aligned_cols=334  Identities=29%  Similarity=0.479  Sum_probs=265.9

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccc-ccccc--CccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLS-TMRCA--NFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~-~~~~~--~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++..+ .++++++|.|+++++||+||+.++++|+.|++...|.... ....+  .....+|.++|+|++|+|+++|
T Consensus         1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08262           1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG   79 (341)
T ss_pred             CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence            577787766 8999999999999999999999999999999988752110 00000  1123457889999999999999


Q ss_pred             CCCCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhH
Q 017793           92 SEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS  170 (366)
Q Consensus        92 ~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~  170 (366)
                      ++++. |++||+|++.+..+|+.|..|..+..           ....|+|+||++++.+.++++|+++++++++...++.
T Consensus        80 ~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~  148 (341)
T cd08262          80 PGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA  148 (341)
T ss_pred             CCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHH
Confidence            99997 99999999999999999999843211           1247999999999999999999999999888556788


Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCc--chHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE--DVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~~~~  248 (366)
                      +||+++..++++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++++....  .+. .+..
T Consensus       149 ~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~  227 (341)
T cd08262         149 VGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELA  227 (341)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHH
Confidence            8998887788999999999999999999999999999977888888999999999999988777543211  111 1222


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG  327 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  327 (366)
                      .  ..+.++|++||++|+...+..++++++++|+++.+|...............++.++.+.... .+.+++++++++++
T Consensus       228 ~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  305 (341)
T cd08262         228 R--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEG  305 (341)
T ss_pred             H--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcC
Confidence            2  23567999999999755788899999999999999865432222222224566777665544 45788999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       328 ~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      .+.+.+.+.+.+++  ++++++++.+.++...||+|++
T Consensus       306 ~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         306 KVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             CCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence            99765666788999  9999999999999999999975

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=4.5e-41  Score=311.03  Aligned_cols=337  Identities=32%  Similarity=0.589  Sum_probs=275.2

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||+.++.++ +.+++.+.|.|.|+++||+||+.++++|++|+.++.+....     .....+|.++|+|++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~-----~~~~~~p~~~g~e~~G~V~~vG~~   75 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWA-----QKTIPVPMVVGHEFVGEVVEVGSE   75 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcc-----cccCCCCcccceeeEEEEEEeCCC
Confidence            467777766 57999999999999999999999999999999876632110     011246778999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV  173 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~  173 (366)
                      ++.+++||+|++.+..+|+.|.+|..+++++|+...+.+ ...+|+|++|+.++.+.++++|+++++++++.+.++.+++
T Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~  154 (341)
T PRK05396         76 VTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAV  154 (341)
T ss_pred             CCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHH
Confidence            999999999999999999999999999999999764443 2357999999999999999999999998888666667776


Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +++.. ...+|++|+|+|+|++|++++|+|+..|+++++++++++++.++++++|++.++++..  .++.+.+.++.  .
T Consensus       155 ~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~  229 (341)
T PRK05396        155 HTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--M  229 (341)
T ss_pred             HHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--C
Confidence            65533 3468999999989999999999999999966888888899999999999998877543  45666665543  2


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc--CCChHHHHHHHHCCCCCC
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDV  331 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~  331 (366)
                      +.++|++|||.|+...++.++++|+++|+++.+|.......+....+..++.++.++...  .+.+.+++++++++ +.+
T Consensus       230 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~  308 (341)
T PRK05396        230 TEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDL  308 (341)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CCh
Confidence            568999999999877889999999999999999876544444455677778888776532  34566788999998 434


Q ss_pred             CCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          332 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       332 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+.+.+.+++  +++++|++.+.++. .||+++++
T Consensus       309 ~~~~~~~~~l--~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        309 SPIITHRFPI--DDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             hHheEEEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence            5667788888  99999999999886 79999875

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.6e-41  Score=308.15  Aligned_cols=318  Identities=30%  Similarity=0.500  Sum_probs=268.7

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      |+++++.++.+++++++|.|+++++||+||+.++++|++|+....|         ..  ..|.++|+|++|+|+++|++ 
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g---------~~--~~~~~~G~e~~G~Vv~~G~~-   68 (319)
T cd08242           1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKG---------YY--PFPGVPGHEFVGIVEEGPEA-   68 (319)
T ss_pred             CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcC---------CC--CCCCccCceEEEEEEEeCCC-
Confidence            5788888888899999999999999999999999999999988873         22  25788999999999999998 


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH  174 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~  174 (366)
                        +++||+|...+..+|+.|.+|..+.+.+|+.....+....+|+|++|++++.+.++++|++++.++++.+.++.+++.
T Consensus        69 --~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~  146 (319)
T cd08242          69 --ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALE  146 (319)
T ss_pred             --CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHH
Confidence              679999999988899999999999988888766554323579999999999999999999999988886555667777


Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +++..+++++++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++...             ..+
T Consensus       147 ~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~  212 (319)
T cd08242         147 ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEG  212 (319)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccC
Confidence            77778899999999999999999999999999994 8888888999999999999877664221             135


Q ss_pred             CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCCc
Q 017793          255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL  334 (366)
Q Consensus       255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~  334 (366)
                      .++|+++||+|+...+..++++++++|+++..+.......+....+..++.++.+.+..  .+++++++++++.+++.+.
T Consensus       213 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~  290 (319)
T cd08242         213 GGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPL  290 (319)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhc
Confidence            68999999999877889999999999999987654444444455566777788776533  3899999999999976666


Q ss_pred             eEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          335 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       335 ~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +.+.|++  +++++|++.+.++. .+|+||+
T Consensus       291 ~~~~~~l--~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         291 ITAVYPL--EEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             eEEEEeH--HHHHHHHHHHhcCC-ceEEEeC
Confidence            8899999  99999999998775 5899986

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=4.7e-41  Score=310.84  Aligned_cols=333  Identities=29%  Similarity=0.480  Sum_probs=278.7

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.++ +++.+.+.|.|++.+++++||+.++++|++|+....|.+..     .....+|.++|+|++|+|+++|++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~~~G~e~~G~V~~vG~~   75 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGG-----ILPYKLPFTLGHENAGWVEEVGSG   75 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcc-----cccCCCCeecccceeEEEEEeCCC
Confidence            578888877 67899999999999999999999999999999887743211     123456889999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  172 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a  172 (366)
                      +..|++||+|++.+...|+.|..|..|..++|++..+.+. ...|+|++|+.++.+.++++|+++++++++.+. .+.+|
T Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta  154 (340)
T cd05284          76 VDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTA  154 (340)
T ss_pred             CCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHH
Confidence            9999999999999888999999999999999999888776 568999999999999999999999999998775 78899


Q ss_pred             HHHHHh--CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          173 VHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       173 ~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      |+++..  ..++++++|||+|+|.+|++++|+|+..| . .++++++++++.+.++++|++.+++++.  . +...+.++
T Consensus       155 ~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~  230 (340)
T cd05284         155 YHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVREL  230 (340)
T ss_pred             HHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHH
Confidence            999854  46889999999998889999999999999 6 6777888899999999999988777543  2 55555554


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK  328 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~  328 (366)
                      .  .+.++|+++|++|+......++++|+++|+++.+|.... ..+.......+++++.+.... ...+++++++++++.
T Consensus       231 ~--~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  307 (340)
T cd05284         231 T--GGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGK  307 (340)
T ss_pred             h--CCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCC
Confidence            3  246799999999986788999999999999999986543 222333334677788776543 567889999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          329 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       329 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +.  + ..+.|++  +++++|++.+++++..||+++.
T Consensus       308 l~--~-~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~  339 (340)
T cd05284         308 VK--V-EITKFPL--EDANEALDRLREGRVTGRAVLV  339 (340)
T ss_pred             CC--c-ceEEEeH--HHHHHHHHHHHcCCccceEEec
Confidence            84  3 3467888  9999999999999999999985

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=5.8e-41  Score=310.81  Aligned_cols=334  Identities=29%  Similarity=0.492  Sum_probs=275.3

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++++++.+++++.|.|.| +++||+||+.++++|++|+....|.         .....|.++|||++|+|+++|++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~---------~~~~~~~~~g~e~~G~V~~vG~~   71 (345)
T cd08287           1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGV---------SPTRAPAPIGHEFVGVVEEVGSE   71 (345)
T ss_pred             CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCC---------CCCCCCcccccceEEEEEEeCCC
Confidence            6788999888999999999986 9999999999999999999887732         22345789999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC--ceEECCCCCCccccccc-----
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-----  166 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~-----  166 (366)
                      ++.+++||+|++.+..+|+.|.+|..++...|.+..+++ ....|+|+||+.++.+  .++++|++++++.+...     
T Consensus        72 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l  150 (345)
T cd08287          72 VTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL  150 (345)
T ss_pred             CCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhh
Confidence            999999999998777889999999999999998766554 3467999999999975  99999999987322211     


Q ss_pred             -hhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793          167 -EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  245 (366)
Q Consensus       167 -~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  245 (366)
                       ..+.+|++++...+++++++++|+|+|++|++++|+|+..|+..++++++++++.++++++|++.++++..  .++...
T Consensus       151 ~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~  228 (345)
T cd08287         151 SDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVAR  228 (345)
T ss_pred             hcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHH
Confidence             35778888887788999999999999999999999999999977899988888999999999988887643  355555


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHH
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFL  324 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  324 (366)
                      +.++.  .+.++|+++|++|++..+..++++++++|+++.+|.......++....+.++.++.+.... .+.++++++++
T Consensus       229 i~~~~--~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (345)
T cd08287         229 VRELT--GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDV  306 (345)
T ss_pred             HHHhc--CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHH
Confidence            55443  3568999999999877899999999999999998865533333333456778888775443 56789999999


Q ss_pred             HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      .++.+.+.+.+.+.+++  ++++++++.+.++.. .|++|+
T Consensus       307 ~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         307 LAGRINPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             HcCCCCHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence            99998655556788888  999999999887755 499885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.2e-40  Score=308.68  Aligned_cols=338  Identities=31%  Similarity=0.533  Sum_probs=279.0

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |+++++.+++.+++++.|.|+| .++||+||+.++++|+.|+.++.|.+.        ...+|.++|+|++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~--------~~~~~~~~g~e~~G~V~~~G~~   72 (345)
T cd08286           1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVP--------TVTPGRILGHEGVGVVEEVGSA   72 (345)
T ss_pred             CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCC--------CCCCCceecccceEEEEEeccC
Confidence            5788888888899999999986 899999999999999999998874321        1234789999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC--ceEECCCCCCccccccch-hhH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++.+++||+|++.+...|+.|.+|..+....|....+..+....|+|+||+.++.+  .++++|++++.++++.+. .+.
T Consensus        73 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~  152 (345)
T cd08286          73 VTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILP  152 (345)
T ss_pred             ccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhH
Confidence            99999999999998888999999999888888876554333457999999999987  899999999999888774 778


Q ss_pred             HHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          171 VGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       171 ~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +||.++ ...++++++++||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++..  .++...+..+
T Consensus       153 ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~  230 (345)
T cd08286         153 TGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLEL  230 (345)
T ss_pred             HHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHH
Confidence            888865 5678899999999999999999999999999447888888999999999999988877543  4555555544


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~  329 (366)
                      .  .+.++|++|||+|....+..++++|+++|+++.+|.......++...++.++.++.+.......+++++++++++.+
T Consensus       231 ~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  308 (345)
T cd08286         231 T--DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKL  308 (345)
T ss_pred             h--CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCC
Confidence            3  35679999999998778899999999999999998654434444445566788887755444678889999999998


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCC--CceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGG--NAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~--~~gkvvi~~  366 (366)
                      .+.+.++++|++  ++++++++.+++..  ...|++|++
T Consensus       309 ~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         309 DPSKLVTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             ChHHcEEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence            665667788999  99999999998764  345988864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.4e-41  Score=311.79  Aligned_cols=336  Identities=32%  Similarity=0.530  Sum_probs=279.1

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||+.++.++ ..+++++.|.|.++++||+||+.++++|++|+.+..         +..+..+|.++|+|++|+|+++|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~---------~~~~~~~p~~~g~e~~G~v~~vG~~   71 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK---------GELPFPPPFVLGHEISGEVVEVGPN   71 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhc---------CCCCCCCCcccccccceEEEEeCCC
Confidence            577888776 568999999999999999999999999999998877         3333456789999999999999999


Q ss_pred             CCC---CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC---------------------CCCCcceEEEEecCC
Q 017793           94 VKS---LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------------------PTNGSLAHKVVHPAK  149 (366)
Q Consensus        94 v~~---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~e~~~~~~~  149 (366)
                      +++   |++||+|++.+..+||.|.+|..+..++|++..++...                     ...|+|++|+.++.+
T Consensus        72 ~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  151 (367)
T cd08263          72 VENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPAT  151 (367)
T ss_pred             CCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechh
Confidence            988   99999999998899999999999999999986533210                     236999999999999


Q ss_pred             ceEECCCCCCccccccch-hhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793          150 LCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  227 (366)
Q Consensus       150 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  227 (366)
                      .++++|+++++.+++.+. .+.+||.++.. ..++++++|||+|+|++|++++++|+..|+..++++++++++.++++++
T Consensus       152 ~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~  231 (367)
T cd08263         152 ALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKEL  231 (367)
T ss_pred             hEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence            999999999999998776 78899999854 6778999999999999999999999999996588888889999999999


Q ss_pred             CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCc
Q 017793          228 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREV  305 (366)
Q Consensus       228 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~  305 (366)
                      |++.++++.  ..++...+....  .+.++|++||++++.+....++++|+++|+++.++.....  ..+....++.++.
T Consensus       232 g~~~v~~~~--~~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  307 (367)
T cd08263         232 GATHTVNAA--KEDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGI  307 (367)
T ss_pred             CCceEecCC--cccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCe
Confidence            998887753  345655555443  3577999999999865788899999999999999855432  2233334446777


Q ss_pred             EEEEeecc--CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          306 DVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       306 ~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++.+++..  .+.+++++++++++.+.+.+.+++.+++  +++.++++.+.++...||+|++
T Consensus       308 ~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         308 KIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             EEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence            77776543  3578899999999999655556788888  9999999999999889999974

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-40  Score=305.92  Aligned_cols=335  Identities=38%  Similarity=0.673  Sum_probs=276.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      |+++++..+..+++.+.|.|++.++|++|+|.++++|+.|+....+.+        ....+|.++|+|++|+|+++|+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~--------~~~~~~~~~g~e~~G~V~~~G~~v   72 (337)
T cd08261           1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRN--------PFASYPRILGHELSGEVVEVGEGV   72 (337)
T ss_pred             CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCC--------CcCCCCcccccccEEEEEEeCCCC
Confidence            578888888889999999999999999999999999999998877321        112347789999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH  174 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~  174 (366)
                      +.|++||+|+..+..+|+.|..|+.+++++|.....++ ....|+|++|+.++++ ++++|++++++++++++.+.++++
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~  150 (337)
T cd08261          73 AGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAH  150 (337)
T ss_pred             CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHH
Confidence            99999999999888899999999999999995432211 1247999999999999 999999999999987777778888


Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++...+++++++|||+|+|.+|++++|+|+.+|+ .++++.+++++.++++++|++.++++..  .++...+.++.  .+
T Consensus       151 ~~~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~  225 (337)
T cd08261         151 AVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DG  225 (337)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CC
Confidence            8867889999999999989999999999999999 5777878899999999999998887643  45666665543  25


Q ss_pred             CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCC
Q 017793          255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKP  333 (366)
Q Consensus       255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~  333 (366)
                      .++|++||++|+...+..++++|+++|+++.++............+..+.+++.+.... .+.+++++++++++.+.+.+
T Consensus       226 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~  305 (337)
T cd08261         226 EGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEA  305 (337)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhh
Confidence            67999999998777889999999999999998855433333333455566777665433 45788999999999996533


Q ss_pred             ceEEEecCChhhHHHHHHHHHcC-CCceEEEeeC
Q 017793          334 LITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL  366 (366)
Q Consensus       334 ~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi~~  366 (366)
                      .+...+++  +++.++++.+.++ ...+|+|+++
T Consensus       306 ~~~~~~~~--~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         306 LITHRFPF--EDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             heEEEeeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence            56678888  9999999999988 4789999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.6e-40  Score=311.64  Aligned_cols=345  Identities=28%  Similarity=0.499  Sum_probs=274.0

Q ss_pred             cccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      .+.+...++.. ..++++++|.|+++++||+||+.++++|++|++...+.. .+.........+|.++|||++|+|+++|
T Consensus        26 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~-~~~~~~~~~~~~~~~~g~e~~G~V~~vG  103 (384)
T cd08265          26 LTNLGSKVWRY-PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDK-DGYILYPGLTEFPVVIGHEFSGVVEKTG  103 (384)
T ss_pred             hccceeEEEeC-CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCC-CcccccCcccCCCcccccceEEEEEEEC
Confidence            34445555554 479999999999999999999999999999998765210 0000000113467899999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCC-------CCccccc
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN-------VSLEEGA  164 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~-------~~~~~aa  164 (366)
                      ++++.|++||+|++.+..+|+.|..|+.+++.+|..+...+. ...|+|++|+.++++.++++|++       ++.+.|+
T Consensus       104 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~  182 (384)
T cd08265         104 KNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGA  182 (384)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhh
Confidence            999999999999999999999999999999999998775553 24799999999999999999986       4555555


Q ss_pred             cchhhHHHHHHHH-h-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC-Ccc
Q 017793          165 MCEPLSVGVHACR-R-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IED  241 (366)
Q Consensus       165 ~~~~~~~a~~~l~-~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~  241 (366)
                      ...++++||+++. . .++++|++|||+|+|++|++++|+|+..|+..|+++++++++.++++++|++.++++... ..+
T Consensus       183 ~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~  262 (384)
T cd08265         183 LVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCL  262 (384)
T ss_pred             hhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccccccc
Confidence            5568889999983 4 689999999999999999999999999999778999888899999999999888765432 225


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc--CCChH
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWP  318 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  318 (366)
                      +...+.++.  .+.++|+++|+.|.. ..+..++++|+++|+++.+|.......+....+..+..++.+....  ...++
T Consensus       263 ~~~~v~~~~--~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  340 (384)
T cd08265         263 SGEKVMEVT--KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFP  340 (384)
T ss_pred             HHHHHHHhc--CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHH
Confidence            556555543  356899999999863 4678899999999999999865433333444555666777776543  45799


Q ss_pred             HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +++++++++.+.+...+++.|++  +++++|++.+.++ ..||+++
T Consensus       341 ~~~~ll~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         341 SVIKLMASGKIDMTKIITARFPL--EGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HHHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence            99999999999655457788999  9999999997665 6788876

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=3.1e-40  Score=305.70  Aligned_cols=335  Identities=38%  Similarity=0.665  Sum_probs=281.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      |+++++.+++.+.+++.|.|++.+++|+||++++++|+.|+.+..|...        +...|.++|+|++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~--------~~~~~~~~g~~~~G~V~~~G~~v   72 (343)
T cd08235           1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT--------DLKPPRILGHEIAGEIVEVGDGV   72 (343)
T ss_pred             CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc--------cCCCCcccccceEEEEEeeCCCC
Confidence            5788888888899999999999999999999999999999988773210        13447789999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCc-----eEECCCCCCccccccchhh
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL-----CYKLPDNVSLEEGAMCEPL  169 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~-----~~~~P~~~~~~~aa~~~~~  169 (366)
                      +.|++||+|++.+..+|+.|.+|..+...+|+...+.+. ...|+|++|+.++.+.     ++++|+++++.+|+.+.++
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~  151 (343)
T cd08235          73 TGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPL  151 (343)
T ss_pred             CCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHH
Confidence            999999999999999999999999999999998766543 3579999999999999     9999999999999877778


Q ss_pred             HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .+|++++...+++++++|||+|+|.+|++++|+|+..|++.++++.+++++.+.++++|.+.+++++  ..++...+.++
T Consensus       152 ~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~  229 (343)
T cd08235         152 ACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAA--EEDLVEKVREL  229 (343)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCC--ccCHHHHHHHH
Confidence            8899998777899999999999899999999999999995488888899999998999998877654  34666666554


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS  326 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  326 (366)
                      .  .+.++|+++||+++.......+++++++|+++.++.....  ..........+++++.+.... .+.++++++++++
T Consensus       230 ~--~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~  307 (343)
T cd08235         230 T--DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIAS  307 (343)
T ss_pred             h--CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHc
Confidence            3  3567999999999777888999999999999998854332  223334566777888776554 5678899999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +.+.+.+.+...|++  +++.++++.+.+++ .||+|++
T Consensus       308 ~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         308 GKIDVKDLITHRFPL--EDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             CCCChHHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence            998654456678888  99999999999998 9999974

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=2.1e-40  Score=307.60  Aligned_cols=341  Identities=27%  Similarity=0.408  Sum_probs=278.2

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccc----cCccCCCCcccccceeEEEEE
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC----ANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~----~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      ||+.++..+ .++++++.|.|+++++||+||+.++++|++|+....|.+......    ......+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            577777755 458999999999999999999999999999999887532110000    000124567899999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~  168 (366)
                      +|++++.+++||+|++.+...|+.|..|..++.++|....+.+. ...|++++|+.++.+.++++|+++++.+++.+. .
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~  159 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS  159 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence            99999999999999999999999999999999999988655553 367999999999999999999999999988765 7


Q ss_pred             hHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          169 LSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       169 ~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      +.+||++++. ..++++++|||+|+|++|++++|+|+..|++.|+++++++++.+.++++|++.+++..  ..++...+.
T Consensus       160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~  237 (350)
T cd08240         160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGS--DPDAAKRII  237 (350)
T ss_pred             hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCC--CccHHHHHH
Confidence            8899999865 4456899999999999999999999999997788888899999999999998776642  234444454


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS  326 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  326 (366)
                      +..   ++++|++||++|.......++++|+++|+++.+|..............+++.++.+.+.. .+++.++++++++
T Consensus       238 ~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~  314 (350)
T cd08240         238 KAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKA  314 (350)
T ss_pred             HHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHc
Confidence            443   338999999999777899999999999999999865543334444455678888887654 4678899999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +.+.  +.....|++  ++++++++.+.+++..||++++
T Consensus       315 ~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         315 GKLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             CCCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEec
Confidence            9984  335567888  9999999999999999999985

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=3e-40  Score=308.99  Aligned_cols=334  Identities=27%  Similarity=0.443  Sum_probs=270.4

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |++.++.+++.++++++|.|++ +++||+||+.++++|++|++...|.         .....|.++|||++|+|+++|++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~---------~~~~~p~~~g~e~~G~V~~vG~~   71 (375)
T cd08282           1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGR---------TGAEPGLVLGHEAMGEVEEVGSA   71 (375)
T ss_pred             CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCC---------CCCCCCceeccccEEEEEEeCCC
Confidence            4677787888999999999996 8999999999999999999988732         22345889999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccc---------cCCCCCCCcceEEEEecCC--ceEECCCCCCccc
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF---------FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEE  162 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~  162 (366)
                      ++.+++||+|++.+..+|+.|..|..++..+|.+..+         .+....+|+|+||++++.+  .++++|+++++++
T Consensus        72 v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~  151 (375)
T cd08282          72 VESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKE  151 (375)
T ss_pred             CCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhh
Confidence            9999999999999999999999999999999986421         1122346999999999976  8999999999884


Q ss_pred             ---cccc-hhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793          163 ---GAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD  238 (366)
Q Consensus       163 ---aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  238 (366)
                         ++.+ ..+.+||+++..+.+++|++|||+|+|++|++++|+|+..|+..++++++++++.++++++|+. .+++.  
T Consensus       152 ~~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~--  228 (375)
T cd08282         152 KDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFS--  228 (375)
T ss_pred             hhheeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccC--
Confidence               4444 4788999999778899999999999999999999999999986688898999999999999984 44432  


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCChH-----------HHHHHHHhhcCCceEEEEcccCCC-------------ce
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDK-----------TMSTALNATRPGGKVCLIGLAKTE-------------MT  294 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~~-------------~~  294 (366)
                      ..++...+.++.   ++++|+++||+|+..           .++.++++++++|+++.+|.....             ..
T Consensus       229 ~~~~~~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~  305 (375)
T cd08282         229 DGDPVEQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELS  305 (375)
T ss_pred             cccHHHHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCcccc
Confidence            245555555442   467999999999763           588899999999999888753311             11


Q ss_pred             eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          295 VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +....++.++..+.+.... ...+++++++++++.+.+...+.+.|++  ++++++++.+.++. .+|+|++.
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         306 FDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             ccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence            2333455566666655443 5678889999999999654457899999  99999999999998 89999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2.8e-40  Score=308.07  Aligned_cols=334  Identities=33%  Similarity=0.529  Sum_probs=274.2

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.++ +.++++++|.|++++++|+||+.++++|+.|+.+..         +.+...+|.++|+|++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~---------g~~~~~~~~~~g~e~~G~V~~vG~~   71 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT---------GDLPAPLPAVLGHEGAGVVEEVGPG   71 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhc---------CCCCCCCCccccccceEEEEEeCCC
Confidence            678888876 678999999999999999999999999999998877         3333456789999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---------------CC----CCCCCcceEEEEecCCceEEC
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---------------GS----PPTNGSLAHKVVHPAKLCYKL  154 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~e~~~~~~~~~~~~  154 (366)
                      ++.|++||+|++.+..+|++|.+|+.++.+.|++...+               +.    ....|+|+||+.++.+.++++
T Consensus        72 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l  151 (363)
T cd08279          72 VTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKI  151 (363)
T ss_pred             ccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEEC
Confidence            99999999999999999999999999999999875321               00    024699999999999999999


Q ss_pred             CCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee
Q 017793          155 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET  232 (366)
Q Consensus       155 P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  232 (366)
                      |+++++++++.+. .+.+||.++ ...+++++++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++.+
T Consensus       152 p~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~v  231 (363)
T cd08279         152 DDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHT  231 (363)
T ss_pred             CCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEE
Confidence            9999999988776 678888876 45789999999999989999999999999999668888899999999999999877


Q ss_pred             eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhhhcCcEEEEe
Q 017793          233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGI  310 (366)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~  310 (366)
                      +++.  ..++...+..+.  .+.++|++||++++...+..++++|+++|+++.+|....  ...+....+..+...+.+.
T Consensus       232 v~~~--~~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  307 (363)
T cd08279         232 VNAS--EDDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGS  307 (363)
T ss_pred             eCCC--CccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEE
Confidence            6643  245655555443  256799999999977788999999999999999975542  2233444455556666655


Q ss_pred             ec----cCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEE
Q 017793          311 FR----YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM  363 (366)
Q Consensus       311 ~~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvv  363 (366)
                      +.    ....+++++++++++.+.+.+.+.++|++  +++++|++.+.+++..+.++
T Consensus       308 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         308 LYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI  362 (363)
T ss_pred             EecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence            32    24578899999999999655557788888  99999999999887765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3.9e-40  Score=305.08  Aligned_cols=333  Identities=39%  Similarity=0.668  Sum_probs=276.3

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      |+++++.+.+.+.+++.|+|+++++||+||+.++++|+.|+....+         ......|.++|+|++|+|+++|+++
T Consensus         1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~---------~~~~~~~~~~g~~~~G~V~~~g~~v   71 (343)
T cd08236           1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLG---------TGAYHPPLVLGHEFSGTVEEVGSGV   71 (343)
T ss_pred             CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcC---------CCCCCCCcccCcceEEEEEEECCCC
Confidence            5788888778899999999999999999999999999999987763         2233457889999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH  174 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~  174 (366)
                      +.|++||+|+..+...|+.|.+|..+.+..|+...+.+. ...|+|++|+.++.+.++++|+++++++++.++.+.+||.
T Consensus        72 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~  150 (343)
T cd08236          72 DDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALH  150 (343)
T ss_pred             CcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHH
Confidence            999999999999888999999999999999888765553 3679999999999999999999999999988777889999


Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++...+++++++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++..  .. ...+....  .+
T Consensus       151 ~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~  225 (343)
T cd08236         151 AVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EG  225 (343)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CC
Confidence            987788999999999998999999999999999965888888888999999999988777543  23 44444333  35


Q ss_pred             CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce---eechHhhhcCcEEEEeecc------CCChHHHHHHHH
Q 017793          255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT---VALTPAAAREVDVIGIFRY------RSTWPLCIEFLR  325 (366)
Q Consensus       255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~  325 (366)
                      .++|++|||+|....+..++++|+++|+++.+|.......   .+...+..++.++.+.+..      .+.+++++++++
T Consensus       226 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (343)
T cd08236         226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLA  305 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHH
Confidence            6799999999877788999999999999999985543211   1223345677777776543      356888999999


Q ss_pred             CCCCCCCCceEEEecCChhhHHHHHHHHHc-CCCceEEEe
Q 017793          326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQ-GGNAIKVMF  364 (366)
Q Consensus       326 ~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~-~~~~gkvvi  364 (366)
                      ++.+.+.+.+.+.+++  ++++++++.+++ +...||+|+
T Consensus       306 ~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         306 SGKIKVEPLITHRLPL--EDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             cCCCChHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence            9998544456678888  999999999998 667888875

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=3.5e-40  Score=304.71  Aligned_cols=331  Identities=26%  Similarity=0.441  Sum_probs=271.2

Q ss_pred             ceEEEEeeCCceE-EEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLK-IQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~-~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++..++... +++.|.|.++++||+|||+++++|++|+....|.         .+...|.++|+|++|+|+++|++
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~---------~~~~~~~~~g~e~~G~V~~~G~~   71 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGD---------FGDKTGRILGHEGIGIVKEVGPG   71 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCC---------CCCCCCccCCcccceEEEEECCC
Confidence            6888898776555 8999999999999999999999999999887732         22234678999999999999999


Q ss_pred             CCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           94 VKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        94 v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      ++.|++||+|++.+ ..+|+.|.+|..+..++|.+....+. ...|+|+||+.++.+.++++|+++++++++.+. .+.+
T Consensus        72 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~t  150 (338)
T PRK09422         72 VTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVT  150 (338)
T ss_pred             CccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhH
Confidence            99999999999754 46899999999999999987654432 457999999999999999999999999998775 7788


Q ss_pred             HHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ||+++..++++++++|||+|+|++|++++|+|+. .|+ .++++++++++.++++++|++.++++.. ..++...+.+..
T Consensus       151 a~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~  228 (338)
T PRK09422        151 TYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEKT  228 (338)
T ss_pred             HHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHhc
Confidence            9999877889999999999999999999999998 498 6888889999999999999988877532 134445554432


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCC
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~  329 (366)
                         + ++|+++.+.++...+..++++++++|+++.+|........+......+..++.+.+.. .+.+++++++++++.+
T Consensus       229 ---~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  304 (338)
T PRK09422        229 ---G-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV  304 (338)
T ss_pred             ---C-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCC
Confidence               3 6895555555567899999999999999999865443344445566677888776543 4578899999999988


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                        .+.+ ..+++  ++++++++.+.++...||+++++
T Consensus       305 --~~~v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        305 --VPKV-QLRPL--EDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             --CccE-EEEcH--HHHHHHHHHHHcCCccceEEEec
Confidence              4444 45788  99999999999999999999864

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.7e-40  Score=305.23  Aligned_cols=326  Identities=26%  Similarity=0.416  Sum_probs=271.3

Q ss_pred             EEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCC
Q 017793           17 AAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   95 (366)
Q Consensus        17 ~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   95 (366)
                      ++.+.++ +.+++++.|.|.|+++|++||+.++++|++|++...|..        ....+|.++|||++|+|+++|++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~--------~~~~~p~~~g~e~~G~V~~vG~~v~   73 (337)
T cd05283           2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEW--------GPTKYPLVPGHEIVGIVVAVGSKVT   73 (337)
T ss_pred             ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCc--------CCCCCCcccCcceeeEEEEECCCCc
Confidence            4455555 689999999999999999999999999999999887432        1234588999999999999999999


Q ss_pred             CCCCCCEEEEc-CCcCCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCCccccccch-
Q 017793           96 SLEVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-  167 (366)
Q Consensus        96 ~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-  167 (366)
                      +|++||+|++. ....|++|.+|..++.++|+++.+..      +....|+|+||+.++.+.++++|+++++++++.+. 
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~  153 (337)
T cd05283          74 KFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLC  153 (337)
T ss_pred             ccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhh
Confidence            99999999854 44589999999999999999876652      12357999999999999999999999999988765 


Q ss_pred             hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      .+.+||++++...++++++++|.|+|++|++++++|+..|+ .++++++++++.++++++|++.+++...  .++.   +
T Consensus       154 ~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~  227 (337)
T cd05283         154 AGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---K  227 (337)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---h
Confidence            67889999877778999999999899999999999999999 7888888889999999999988776432  2221   1


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS  326 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  326 (366)
                      .    .++++|++|||+|+......++++|+++|+++.+|.......++...++.++.++.++... .+.++.+++++++
T Consensus       228 ~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  303 (337)
T cd05283         228 K----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAE  303 (337)
T ss_pred             h----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHh
Confidence            1    2568999999999875688899999999999999866544344445556788888887655 5678889999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +++  ++.+ +.|++  +++++|++.+++++..||+|++
T Consensus       304 ~~l--~~~~-~~~~~--~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         304 HGI--KPWV-EVIPM--DGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             CCC--ccce-EEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence            998  4444 67888  9999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=2.1e-40  Score=304.42  Aligned_cols=305  Identities=19%  Similarity=0.237  Sum_probs=245.7

Q ss_pred             ceEEEEeeCC------ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793           15 NMAAWLLGIK------TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE   88 (366)
Q Consensus        15 ~~~~~~~~~~------~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   88 (366)
                      ||++++.+++      .++++++|.|.|+++||+||+.++|+|++|++...|.+.       ....+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~-------~~~~~p~v~G~e~~G~V~   73 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYG-------STKALPVPPGFEGSGTVV   73 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCC-------CCCCCCcCCCcceEEEEE
Confidence            5788887653      578889999999999999999999999999998874321       113468899999999999


Q ss_pred             EeCCCCCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch
Q 017793           89 EVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE  167 (366)
Q Consensus        89 ~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~  167 (366)
                      ++|+++++ |++||+|++.+                           ..+|+|+||+.++++.++++|+++++++++.++
T Consensus        74 ~vG~~v~~~~~vGd~V~~~~---------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~  126 (324)
T cd08291          74 AAGGGPLAQSLIGKRVAFLA---------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF  126 (324)
T ss_pred             EECCCccccCCCCCEEEecC---------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence            99999996 99999998631                           014999999999999999999999999988654


Q ss_pred             -hhHHHHHHHHhCCCCCCCEEEEE--CCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHH
Q 017793          168 -PLSVGVHACRRANVGPETNVMIM--GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT  244 (366)
Q Consensus       168 -~~~~a~~~l~~~~~~~~~~vlI~--G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  244 (366)
                       ...+||..++..+. ++++++|+  |+|++|++++|+|+.+|+ .++++++++++.++++++|++.++++..  +++.+
T Consensus       127 ~~~~ta~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~  202 (324)
T cd08291         127 VNPLTALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLE  202 (324)
T ss_pred             ccHHHHHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHH
Confidence             56677755555554 56667775  479999999999999999 6888889999999999999999887543  56666


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc--eeechHhhhcCcEEEEeecc-------CC
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TVALTPAAAREVDVIGIFRY-------RS  315 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~  315 (366)
                      .+.++.  .+.++|++||++|+. .....+++++++|+++.+|......  .++....+.+++++.+++..       .+
T Consensus       203 ~v~~~~--~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (324)
T cd08291         203 DLKELI--AKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPE  279 (324)
T ss_pred             HHHHHh--CCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHH
Confidence            665554  256899999999976 5677899999999999998654321  23344567788888887643       23


Q ss_pred             ChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       316 ~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      .+++++++++ +.+  ++.++++|+|  +++++|++.+.++...||+++.
T Consensus       280 ~~~~~~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         280 VVKKLKKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHHHHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence            5777888887 776  7788899999  9999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=4.2e-40  Score=310.28  Aligned_cols=348  Identities=21%  Similarity=0.216  Sum_probs=276.5

Q ss_pred             CcccceEEEEee-----C-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhccccccc--ccCccCCCC-ccccc
Q 017793           11 DKNQNMAAWLLG-----I-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR--CANFIVKKP-MVIGH   81 (366)
Q Consensus        11 ~~~~~~~~~~~~-----~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~--~~~~~~~~p-~i~G~   81 (366)
                      +|++||+.++..     | +.+++.++|.|.|+++|++||+.++++|++|++...+.+.....  .+......| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            567788888843     2 45899999999999999999999999999998776543211100  000111223 37999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcc
Q 017793           82 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE  161 (366)
Q Consensus        82 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~  161 (366)
                      |++|+|+++|++++.|++||+|++.+...|++|.+|+.+++++|+.+.+++.....|+|+||++++.+.++++|++++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~  163 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE  163 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence            99999999999999999999999999999999999999999999987666655568999999999999999999999999


Q ss_pred             ccccch-hhHHHHHHHH---hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          162 EGAMCE-PLSVGVHACR---RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       162 ~aa~~~-~~~~a~~~l~---~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      +++.+. .+.+||.++.   ..++++++++||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.++++.
T Consensus       164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~  242 (398)
T TIGR01751       164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRN  242 (398)
T ss_pred             HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCC
Confidence            888765 7888998874   367899999999995 9999999999999999 566677888899999999999888754


Q ss_pred             CCC--------------------cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-cee
Q 017793          237 TDI--------------------EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTV  295 (366)
Q Consensus       237 ~~~--------------------~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~  295 (366)
                      ...                    ..+...+.++  +.++++|++|||+|. ..+..++++++++|+++.+|..... ..+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  319 (398)
T TIGR01751       243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTGYNHDY  319 (398)
T ss_pred             CcchhhccccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence            310                    1122223222  235679999999996 5788899999999999999865432 334


Q ss_pred             echHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          296 ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +...+..++.++.+.... .+.+++++++++++.+  .+.+++++++  ++++++++.+.++...||+|+++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       320 DNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             CHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            444555667777766543 3457889999999998  4557788888  99999999999999999999864

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.7e-39  Score=299.72  Aligned_cols=331  Identities=37%  Similarity=0.661  Sum_probs=277.0

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      |+++++.+++.+++.+.|.|+++++||+||++++++|+.|+....|         .....+|.++|+|++|+|+++|+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g---------~~~~~~p~~~g~~~~G~v~~vG~~v   71 (334)
T cd08234           1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEG---------EFGAAPPLVPGHEFAGVVVAVGSKV   71 (334)
T ss_pred             CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcC---------CCCCCCCcccccceEEEEEEeCCCC
Confidence            5788888888899999999999999999999999999999988773         2233467899999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH  174 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~  174 (366)
                      +.|++||+|++.+...|+.|.+|..+.+++|+.+.+.+. ...|+|++|+.++.+.++++|+++++.+|+.+..+.++++
T Consensus        72 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~  150 (334)
T cd08234          72 TGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH  150 (334)
T ss_pred             CCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHH
Confidence            999999999999999999999999999999988765432 2579999999999999999999999999887667778888


Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +++..++++++++||+|+|.+|++++++|+..|+.+++++++++++.++++++|++.++++..  .++... + .  ..+
T Consensus       151 ~l~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-~-~--~~~  224 (334)
T cd08234         151 GLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ-K-E--DNP  224 (334)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH-H-H--hcC
Confidence            887788999999999999999999999999999965888888999999999999887766533  333333 2 2  235


Q ss_pred             CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCC
Q 017793          255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK  332 (366)
Q Consensus       255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~  332 (366)
                      .++|+++||++........+++|+++|+++.+|.....  .......+..++..+.+.......+++++++++++.+.+.
T Consensus       225 ~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (334)
T cd08234         225 YGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVK  304 (334)
T ss_pred             CCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChh
Confidence            78999999998777888999999999999999865432  2222333445677887776666778999999999998655


Q ss_pred             CceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          333 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       333 ~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +.+..++++  ++++++++.+.+ ...||+++
T Consensus       305 ~~~~~~~~~--~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         305 GLVSHRLPL--EEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             hhEEEEecH--HHHHHHHHHHhc-CCceEEEe
Confidence            556778888  999999999998 78899986

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.6e-39  Score=300.59  Aligned_cols=336  Identities=33%  Similarity=0.583  Sum_probs=273.2

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++++++ .+.+.+.|.|.|+++|++||+.++++|+.|+..+.+...     .......|.++|+|++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~-----~~~~~~~~~~~g~e~~G~V~~~G~~   75 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEW-----AQSRIKPPLIFGHEFAGEVVEVGEG   75 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCC-----ccccCCCCcccccceEEEEEEECCC
Confidence            5777887664 699999999999999999999999999999987552100     0011235678999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV  173 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~  173 (366)
                      ++.|++||+|++.+..+|+.|.+|..+.+++|+..++.+. ...|+|++|++++.+.++++|++++++.++...++.+++
T Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~  154 (341)
T cd05281          76 VTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAV  154 (341)
T ss_pred             CCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHH
Confidence            9999999999999888999999999999999988766553 457999999999999999999999987776666788888


Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +++. ...+++++|||+|+|++|++++|+|+..|++.++++++++++.++++++|++.++++.  ..++. .+.++.  .
T Consensus       155 ~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~--~  228 (341)
T cd05281         155 HTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVT--D  228 (341)
T ss_pred             HHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHc--C
Confidence            8765 4457899999998999999999999999986678888889999999999998776643  24555 554443  3


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech-HhhhcCcEEEEeecc--CCChHHHHHHHHCCCCC
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKID  330 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~  330 (366)
                      ++++|++|||+|+......++++|+++|+++.+|........... ....+++++.+....  .+.++++++++.++.+.
T Consensus       229 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  308 (341)
T cd05281         229 GTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVD  308 (341)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCC
Confidence            568999999999877889999999999999999865432222222 356677777766532  45678899999999986


Q ss_pred             CCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +.+.+...+++  ++++++++.+.++. .||+|++
T Consensus       309 ~~~~~~~~~~~--~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         309 LSPVITHKLPL--EDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             hhHheEEEecH--HHHHHHHHHHhcCC-CceEEec
Confidence            65667778888  99999999999998 9999986

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.1e-39  Score=299.23  Aligned_cols=335  Identities=31%  Similarity=0.504  Sum_probs=277.0

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++..+ .++++++.|.|.+.+++|+||+.++++|+.|+....|..        ....+|.++|+|++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~V~~~G~~   72 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHD--------PDVTLPHVPGHEFAGVVVEVGED   72 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCC--------CCCCCCeeeccceeEEEEEECCC
Confidence            577777765 468999999999999999999999999999998877421        11345789999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC--ceEECCCCCCccccccch-hhH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++.|++||+|++.+...|++|.+|..|..++|+.....+. ...|+|++|+.++..  .++++|++++.++++.+. .+.
T Consensus        73 ~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~  151 (345)
T cd08260          73 VSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGF-THPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFA  151 (345)
T ss_pred             CccCCCCCEEEECCCCCCCCCccccCcCcccCCCCccccc-CCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchH
Confidence            9999999999987777899999999999999998643332 247999999999975  999999999999888775 788


Q ss_pred             HHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          171 VGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       171 ~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +||+++ +..+++++++++|+|+|++|++++|+|+..|+ .++++.+++++.+.++++|++.++++.. ..++...+..+
T Consensus       152 ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~  229 (345)
T cd08260         152 TAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDL  229 (345)
T ss_pred             HHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHH
Confidence            999998 45788999999999999999999999999999 6788888899999999999988877543 14555555544


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC---ceeechHhhhcCcEEEEeecc-CCChHHHHHHHH
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE---MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLR  325 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  325 (366)
                      .   ++++|++|||+|+......++++++++|+++.+|.....   ..++...+..+++++.+.... ...+++++++++
T Consensus       230 ~---~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  306 (345)
T cd08260         230 T---GGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIA  306 (345)
T ss_pred             h---CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHH
Confidence            3   338999999999766888999999999999999865432   233344455777888876544 567889999999


Q ss_pred             CCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       326 ~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++++.+.+.+.+.+++  ++++++++.+.++...||+|++
T Consensus       307 ~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         307 SGKLDPEPLVGRTISL--DEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             cCCCChhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence            9998655556788888  9999999999999999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=301.17  Aligned_cols=309  Identities=18%  Similarity=0.196  Sum_probs=242.9

Q ss_pred             cCCcccceEEEEe-------eCCceEEEE---ecCCC-CCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCc
Q 017793            9 EGDKNQNMAAWLL-------GIKTLKIQP---YHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM   77 (366)
Q Consensus         9 ~~~~~~~~~~~~~-------~~~~~~~~~---~~~p~-~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~   77 (366)
                      +....++|+.++.       .++.+++++   .|.|. +++|||||||.|+++||.|...+.+.        ......|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~--------~~~~~~p~   74 (348)
T PLN03154          3 EGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDF--------HDSYLPPF   74 (348)
T ss_pred             CCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhcc--------CCCCCCCc
Confidence            3444556777665       225688877   46663 58999999999999999987643311        11123588


Q ss_pred             cccc--ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCc--eEE
Q 017793           78 VIGH--ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYK  153 (366)
Q Consensus        78 i~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~--~~~  153 (366)
                      ++|+  |++|+|..+|+++++|++||+|+.                               .|+|+||+.++.+.  +.+
T Consensus        75 ~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~~~~aey~~v~~~~~~~~~  123 (348)
T PLN03154         75 VPGQRIEGFGVSKVVDSDDPNFKPGDLISG-------------------------------ITGWEEYSLIRSSDNQLRK  123 (348)
T ss_pred             CCCCeeEeeEEEEEEecCCCCCCCCCEEEe-------------------------------cCCcEEEEEEeccccceEE
Confidence            9997  889999999999999999999973                               36899999998753  544


Q ss_pred             --CCCCCCcc-ccccch-hhHHHHHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-H
Q 017793          154 --LPDNVSLE-EGAMCE-PLSVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N  226 (366)
Q Consensus       154 --~P~~~~~~-~aa~~~-~~~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~  226 (366)
                        +|++++++ +|+.++ ++.|||+++. ..++++|++|||+|+ |++|++++|+||..|+ +|+++++++++.++++ +
T Consensus       124 ~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~  202 (348)
T PLN03154        124 IQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNK  202 (348)
T ss_pred             ccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHh
Confidence              58999986 565554 8889999984 578999999999995 9999999999999999 6888888999999987 7


Q ss_pred             cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc------eeechHh
Q 017793          227 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM------TVALTPA  300 (366)
Q Consensus       227 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~  300 (366)
                      +|++.++++.. ..++.+.++++.   ++++|++||++|+. .+..++++++++|+++.+|......      ..+...+
T Consensus       203 lGa~~vi~~~~-~~~~~~~i~~~~---~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  277 (348)
T PLN03154        203 LGFDEAFNYKE-EPDLDAALKRYF---PEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNL  277 (348)
T ss_pred             cCCCEEEECCC-cccHHHHHHHHC---CCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHH
Confidence            99999988643 235555555442   46899999999964 8899999999999999998654221      1233456


Q ss_pred             hhcCcEEEEeecc------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          301 AAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       301 ~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.+++++.+++..      .+.++++++++++|++  ++.+..+|+|  +++++|++.+.+++..||+|+++
T Consensus       278 ~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        278 ISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             hhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            7788888887643      2457789999999999  5556677889  99999999999999999999874

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=299.93  Aligned_cols=326  Identities=27%  Similarity=0.423  Sum_probs=270.0

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |+++++.+++ ++++++.|.|.++++|++|++.++++|++|+....|..        ....+|.++|+|++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~v~~~g~~   72 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFY--------PRMKYPVILGHEVVGTVEEVGEN   72 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCC--------CCCCCCeeccccceEEEEEeCCC
Confidence            5788888886 49999999999999999999999999999998776321        11345788999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  172 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a  172 (366)
                      ++.+++||+|++.+..+|+.|.+|..+..++|+...+++. ...|+|++|+.++.+.++++|+++++.+++.+. .+.+|
T Consensus        73 ~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a  151 (334)
T PRK13771         73 VKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMV  151 (334)
T ss_pred             CccCCCCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHH
Confidence            9889999999999888999999999999999999776653 457999999999999999999999999888775 77889


Q ss_pred             HHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          173 VHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      |+++...++++++++||+|+ |++|++++|+|+..|+ +++++++++++.+.++++ ++.++++.    ++...+..+  
T Consensus       152 ~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~--  223 (334)
T PRK13771        152 YRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI--  223 (334)
T ss_pred             HHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc--
Confidence            99886668899999999995 9999999999999999 678888888999988888 66554432    333333321  


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce--eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT--VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK  328 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~  328 (366)
                         .++|+++||+|+. ....++++|+++|+++.+|.......  ........++.++.+.... .+.+++++++++++.
T Consensus       224 ---~~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (334)
T PRK13771        224 ---GGADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGK  299 (334)
T ss_pred             ---CCCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCC
Confidence               2699999999975 68899999999999999986543222  3333345667777776443 567889999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          329 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       329 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +  .+.+.+.|++  +++++|++.+.++...||+++.
T Consensus       300 l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (334)
T PRK13771        300 I--KPVIGAEVSL--SEIDKALEELKDKSRIGKILVK  332 (334)
T ss_pred             C--cceEeeeEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            8  4557788889  9999999999998889999986

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=4.1e-39  Score=297.78  Aligned_cols=329  Identities=34%  Similarity=0.631  Sum_probs=268.7

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV  103 (366)
Q Consensus        24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V  103 (366)
                      ..+++++.|.|.|+++|++||+.++++|+.|+..+.+....     .....+|.++|+|++|+|+++|+++++|++||+|
T Consensus         9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~-----~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V   83 (340)
T TIGR00692         9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWA-----QSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV   83 (340)
T ss_pred             CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCC-----CCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence            57889999999999999999999999999999876532110     0112357789999999999999999999999999


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHHHHHhCCCCC
Q 017793          104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP  183 (366)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~  183 (366)
                      +..+...|+.|..|..++.++|++..+++. ...|+|++|++++++.++++|++++++.|+...++.+|++++ ....++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~  161 (340)
T TIGR00692        84 SVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPIS  161 (340)
T ss_pred             EECCcCCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCC
Confidence            999999999999999999999999876642 357999999999999999999999987776656788888776 345678


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +++++|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..  .++.+.+.++.  .++++|++|||
T Consensus       162 g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~--~~~~~d~vld~  237 (340)
T TIGR00692       162 GKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLT--DGEGVDVFLEM  237 (340)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhc--CCCCCCEEEEC
Confidence            999999889999999999999999965888888889999999999987776533  45666665543  35689999999


Q ss_pred             CCChHHHHHHHHhhcCCceEEEEcccCCCceeech-HhhhcCcEEEEeecc--CCChHHHHHHHHCCCCCCCCceEEEec
Q 017793          264 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFG  340 (366)
Q Consensus       264 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~  340 (366)
                      +|+...+...+++|+++|+++.+|........+.. .+.++.+++.+....  .+.+++++++++++.+.+.+.+.+.++
T Consensus       238 ~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~  317 (340)
T TIGR00692       238 SGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFK  317 (340)
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeee
Confidence            99877889999999999999999865332233333 456677777765532  345788999999999965455778888


Q ss_pred             CChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          341 FTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       341 l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +  +++.++++.+.++.. ||+|+++
T Consensus       318 l--~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       318 F--DKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             H--HHHHHHHHHHhcCCC-ceEEEeC
Confidence            8  999999999998864 9999875

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9.8e-39  Score=295.45  Aligned_cols=334  Identities=28%  Similarity=0.455  Sum_probs=277.1

Q ss_pred             ceEEEEeeCC--ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           15 NMAAWLLGIK--TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        15 ~~~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      ||++++.+++  .+++++.|.|.+.++|++||+.++++|++|+.+..|...       ...+.|.++|+|++|+|+++|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~V~~vG~   73 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWP-------VKPKLPLIGGHEGAGVVVAVGP   73 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCC-------cCCCCCccCCcccceEEEEeCC
Confidence            6788888665  899999999999999999999999999999988773221       1124467899999999999999


Q ss_pred             CCCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           93 EVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +++.|++||+|++.+ ...|+.|.+|..++..+|+...+.+. ...|++++|+.++.+.++++|+++++++++.+. .+.
T Consensus        74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~  152 (341)
T cd08297          74 GVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV  152 (341)
T ss_pred             CCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence            999999999999876 46799999999999999998766654 357999999999999999999999999988765 788


Q ss_pred             HHHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +||+++...++++++++||+|+ +++|++++++|+.+|+ .++++.+++++.+.++++|++.++++..  .++...+.+.
T Consensus       153 ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~  229 (341)
T cd08297         153 TVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKEL  229 (341)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHH
Confidence            8999987778999999999984 6799999999999999 6888888889999999999988877543  3565665544


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeecc-CCChHHHHHHHHCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG  327 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  327 (366)
                      .  .++++|++||+.++......++++++++|+++.+|...... .+....+..++.++.+.... .+.+++++++++++
T Consensus       230 ~--~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (341)
T cd08297         230 T--GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARG  307 (341)
T ss_pred             h--cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcC
Confidence            3  35789999998887778999999999999999998654322 33334455778888775543 46788999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       328 ~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+.  +.+ ..|++  ++++++++.+.++...||+++++
T Consensus       308 ~l~--~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         308 KVK--PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             CCc--cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence            984  333 56888  99999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=2.3e-38  Score=292.47  Aligned_cols=333  Identities=32%  Similarity=0.552  Sum_probs=276.6

Q ss_pred             ceEEEEeeCC-c-eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           15 NMAAWLLGIK-T-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        15 ~~~~~~~~~~-~-~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      ||+.++..+. . +.+.+.|.|.+++++|+|++.++++|+.|+....|.+.       .....|.++|+|++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-------~~~~~~~~~g~~~~G~v~~~G~   73 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP-------TLTKLPLTLGHEIAGTVVEVGA   73 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc-------ccCCCCEeccccccEEEEEECC
Confidence            6788888664 4 57788899999999999999999999999988774321       1234577899999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      +++.|++||+|++.+..+|+.|.+|..++..+|......+. ...|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus        74 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~t  152 (338)
T cd08254          74 GVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLT  152 (338)
T ss_pred             CCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHH
Confidence            99999999999999989999999999999999876554443 457999999999999999999999999988774 8889


Q ss_pred             HHHHHH-hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          172 GVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       172 a~~~l~-~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ||+++. ..+++++++|||.|+|++|++++++|+..|+ .++++++++++.+.++++|++.+++..  ...+...+ .. 
T Consensus       153 a~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~~-~~-  227 (338)
T cd08254         153 PYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL--DDSPKDKK-AA-  227 (338)
T ss_pred             HHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC--CcCHHHHH-HH-
Confidence            999885 4679999999999889999999999999999 588888999999999999998776643  23444444 22 


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCC
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~  329 (366)
                       ..++++|+++||+|.......++++|+++|+++.+|.......+....+..++.++.+.+.. .+.+++++++++++.+
T Consensus       228 -~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l  306 (338)
T cd08254         228 -GLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKL  306 (338)
T ss_pred             -hcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCC
Confidence             23678999999998877899999999999999999865544444455567777788776544 5678899999999998


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+.   .+.+++  ++++++++.+.+++..||++++.
T Consensus       307 ~~~---~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         307 DPQ---VETRPL--DEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             ccc---ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence            543   467888  99999999999999999999863

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.6e-39  Score=292.00  Aligned_cols=260  Identities=24%  Similarity=0.427  Sum_probs=220.5

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC------CCCCcceEEEE
Q 017793           78 VIGHECAGIIEEVGSEVK------SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVV  145 (366)
Q Consensus        78 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~  145 (366)
                      ++|||++|+|+++|++|+      +|++||||++.+..+|+.|.+|+.++++.|++..+++..      ..+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            579999999999999999      899999999999999999999999999999997766532      24699999999


Q ss_pred             ecCC-ceEECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793          146 HPAK-LCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI  223 (366)
Q Consensus       146 ~~~~-~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~  223 (366)
                      ++++ .++++|+++++++++.+. .+.++++++++....++++|||+|+|++|++++|+||.+|+++|++++.+++|.++
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            9997 799999999999988775 66888999987777799999999999999999999999999768888889999999


Q ss_pred             HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC--CCceeechHhh
Q 017793          224 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAA  301 (366)
Q Consensus       224 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~  301 (366)
                      ++++|++.++++..    ..+.+.++.  .+.++|++||++|.+..++.++++++++|+++.+|...  ...+++...+.
T Consensus       161 a~~~Ga~~~i~~~~----~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~  234 (280)
T TIGR03366       161 ALSFGATALAEPEV----LAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV  234 (280)
T ss_pred             HHHcCCcEecCchh----hHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence            99999988776421    223333332  35689999999998888999999999999999999653  23355666788


Q ss_pred             hcCcEEEEeecc-CCChHHHHHHHHCC--CCCCCCceEEEecCChhh
Q 017793          302 AREVDVIGIFRY-RSTWPLCIEFLRSG--KIDVKPLITHRFGFTQKE  345 (366)
Q Consensus       302 ~~~~~~~~~~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~l~~~~  345 (366)
                      .+++++.++..+ .++++++++++.++  ++.+.+++++.|++  ++
T Consensus       235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~  279 (280)
T TIGR03366       235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD  279 (280)
T ss_pred             hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence            899999998876 46799999999985  56666788888888  65

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-37  Score=287.43  Aligned_cols=327  Identities=32%  Similarity=0.524  Sum_probs=267.8

Q ss_pred             ceEEEEee-CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLG-IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |+++++.. +..+.+++.|.|.+.+++|+|+++++++|++|+....|..        .....|.++|+|++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~v~~~G~~   72 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFF--------PRGKYPLILGHEIVGTVEEVGEG   72 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCC--------CCCCCCeeccccceEEEEEECCC
Confidence            57788876 4788999999999999999999999999999998877321        11345789999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  172 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a  172 (366)
                      ++.|++||+|++.+...|+.|.+|..+.+++|+....++ ....|+|++|+.++.+.++++|+++++++++.+. .+.+|
T Consensus        73 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta  151 (332)
T cd08259          73 VERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTA  151 (332)
T ss_pred             CccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHH
Confidence            999999999999988899999999999999999864433 3457999999999999999999999998888775 78889


Q ss_pred             HHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          173 VHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      |++++..++.+++++||+| +|++|++++++++..|+ .++++.+++++.+.+++++.+.+++..    ++.+.+...  
T Consensus       152 ~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--  224 (332)
T cd08259         152 VHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL--  224 (332)
T ss_pred             HHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc--
Confidence            9998778899999999998 59999999999999999 577777888888888889987665432    144444332  


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce-eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~  329 (366)
                         .++|++++++|.. ....++++++++|+++.++....... ........++..+.+.... ...+++++++++++.+
T Consensus       225 ---~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  300 (332)
T cd08259         225 ---GGADVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKI  300 (332)
T ss_pred             ---cCCCEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC
Confidence               2799999999965 57888999999999999986543221 2223334566666666433 5568889999999988


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                        .+.+.+.|++  ++++++++.+.++...||++++
T Consensus       301 --~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         301 --KPVIDRVVSL--EDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             --ccceeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence              4557788899  9999999999999889999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=4.4e-38  Score=291.52  Aligned_cols=298  Identities=18%  Similarity=0.249  Sum_probs=226.1

Q ss_pred             CceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017793           24 KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR  102 (366)
Q Consensus        24 ~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~  102 (366)
                      +.+++++.|.|+| ++|||||||+|+|||+.|+.......  .   ..+...+|.++|+|++|+|+++|+++++|++||+
T Consensus        21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~--~---~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~   95 (345)
T cd08293          21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDT--G---TDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDI   95 (345)
T ss_pred             cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhccccc--c---cccCCCccCCCceEeeEEEEEeccCCCCCCCCCE
Confidence            5789999999987 49999999999999999864322100  0   0112346789999999999999999999999999


Q ss_pred             EEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc-----cccchhhHHHHHHHH
Q 017793          103 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACR  177 (366)
Q Consensus       103 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~-----aa~~~~~~~a~~~l~  177 (366)
                      |+..                              .++|+||++++++.++++|+++++++     ++...++.+||+++.
T Consensus        96 V~~~------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~  145 (345)
T cd08293          96 VTSF------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQ  145 (345)
T ss_pred             EEec------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHH
Confidence            9841                              25799999999999999999864432     233347889999984


Q ss_pred             -hCCCCCC--CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          178 -RANVGPE--TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       178 -~~~~~~~--~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                       .++++++  ++|||+| +|++|++++|+|+..|+.+|+++++++++.+++++ +|++.++++.+  .++.+.++++.  
T Consensus       146 ~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~~--  221 (345)
T cd08293         146 EKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRELC--  221 (345)
T ss_pred             HhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHHC--
Confidence             5778877  9999998 59999999999999998568888889999998876 99999887643  56766666553  


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC---Cce----eec--hHhh-hcCcEEEEeec--c----CCC
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT---EMT----VAL--TPAA-AREVDVIGIFR--Y----RST  316 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~----~~~--~~~~-~~~~~~~~~~~--~----~~~  316 (366)
                       ++++|++||++|+. .+..++++|+++|+++.+|....   ...    ...  ..+. .+++.......  .    .+.
T Consensus       222 -~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (345)
T cd08293         222 -PEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEA  299 (345)
T ss_pred             -CCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHH
Confidence             46899999999976 67899999999999999984321   111    110  1111 22333322211  1    234


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++++++++.+.+  .....+++  +++++|++.+.+++..||+|+++
T Consensus       300 ~~~~~~l~~~g~i~~--~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         300 IAQLSQWVKEGKLKV--KETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHHHCCCccc--eeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence            677889999999943  34445678  99999999999999999999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.3e-37  Score=286.54  Aligned_cols=320  Identities=24%  Similarity=0.374  Sum_probs=263.2

Q ss_pred             ceEEEEeeCC-----ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           15 NMAAWLLGIK-----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        15 ~~~~~~~~~~-----~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      |++.++.++.     .+.+++.+.|.++++||+||+.++++|++|+....|..        .....|.++|+|++|+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~V~~   72 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDL--------PPPKLPLIPGHEIVGRVEA   72 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCC--------CCCCCCccccccccEEEEE
Confidence            5677777554     68888888888999999999999999999998877321        0134578999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-
Q 017793           90 VGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-  167 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-  167 (366)
                      +|+++++|++||+|.+.+. ++|+.|.+|..+.+++|+.+.+.+. ...|+|+||+.++.+.++++|+++++.+++.+. 
T Consensus        73 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~  151 (329)
T cd08298          73 VGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLC  151 (329)
T ss_pred             ECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhh
Confidence            9999999999999987543 6889999999999999998877664 357999999999999999999999999888665 


Q ss_pred             hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      .+.+||+++..+++++++++||+|+|++|++++++++..|+ ++++++.++++.++++++|++..+++...         
T Consensus       152 ~~~ta~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---------  221 (329)
T cd08298         152 AGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL---------  221 (329)
T ss_pred             hhHHHHHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc---------
Confidence            78899999977899999999999999999999999999998 68888888899999999999876654321         


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeecc-CCChHHHHHHHH
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLR  325 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  325 (366)
                           .++++|+++++.+...++..++++++++|+++.+|...... .++.. .+.....+.+.... .+.+++++++++
T Consensus       222 -----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~  295 (329)
T cd08298         222 -----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAA  295 (329)
T ss_pred             -----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHH
Confidence                 14579999998777778999999999999999987533211 11221 23455566665544 456888999999


Q ss_pred             CCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       326 ~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      ++.+.+  . .+.|++  +++++|++.+++++..||+++
T Consensus       296 ~~~l~~--~-~~~~~~--~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         296 EIPIKP--E-VETYPL--EEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             cCCCCc--e-EEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence            998843  3 578888  999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=4.3e-38  Score=289.12  Aligned_cols=289  Identities=19%  Similarity=0.226  Sum_probs=230.5

Q ss_pred             eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017793           22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD  101 (366)
Q Consensus        22 ~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd  101 (366)
                      .++.+++++.|.|+|++|||||||.|+|+|+.+..-..         .  ....|.++|.|++|+|+++|+   .|++||
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~---------~--~~~~~~i~G~~~~g~v~~~~~---~~~~Gd   80 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRVAAK---------R--LKEGDTMMGQQVARVVESKNV---ALPKGT   80 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhcccC---------c--CCCCCcEecceEEEEEEeCCC---CCCCCC
Confidence            44789999999999999999999999999996553211         1  123478999999999999874   599999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEEC----CCCCCcccc-ccc-hhhHHHHHH
Q 017793          102 RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL----PDNVSLEEG-AMC-EPLSVGVHA  175 (366)
Q Consensus       102 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~----P~~~~~~~a-a~~-~~~~~a~~~  175 (366)
                      ||+.                               .++|++|+.++.+.+.++    |+++++++| +++ .++.|||++
T Consensus        81 rV~~-------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~  129 (325)
T TIGR02825        81 IVLA-------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFG  129 (325)
T ss_pred             EEEE-------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHH
Confidence            9984                               246899999999988887    899999887 445 478999999


Q ss_pred             H-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          176 C-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       176 l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      + +.+++++|++|||+| +|++|++++|+|+..|+ +++++++++++.++++++|++.++++... ..+.+.++..   .
T Consensus       130 l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~  204 (325)
T TIGR02825       130 LLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---S  204 (325)
T ss_pred             HHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---C
Confidence            7 568899999999998 69999999999999999 68888889999999999999998886432 2444444333   3


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-----Cce--eechHhhhcCcEEEEeecc-------CCChHH
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-----EMT--VALTPAAAREVDVIGIFRY-------RSTWPL  319 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~  319 (366)
                      ++++|++||++|+. .+..++++++++|+++.+|....     ...  .....+.++.+++.++...       .+.+++
T Consensus       205 ~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  283 (325)
T TIGR02825       205 PDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKE  283 (325)
T ss_pred             CCCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHH
Confidence            56899999999975 67899999999999999985432     111  1233456677787776532       235788


Q ss_pred             HHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          320 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +++++++|++.+  .+...|++  +++++|++.+++++..||+|++
T Consensus       284 ~~~l~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       284 LLKWVLEGKIQY--KEYVIEGF--ENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHHCCCccc--ceeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence            999999999954  34566788  9999999999999999999974

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.2e-37  Score=286.18  Aligned_cols=306  Identities=23%  Similarity=0.265  Sum_probs=247.3

Q ss_pred             ceEEEEeeCC----ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           15 NMAAWLLGIK----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        15 ~~~~~~~~~~----~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      ||++++.+++    .++++++|.|.++++||+|||.++++|++|+....|...       .....|.++|||++|+|+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-------~~~~~p~~~G~e~~G~V~~~   73 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYG-------YKPELPAIGGSEAVGVVDAV   73 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCC-------CCCCCCCCCCcceEEEEEEe
Confidence            5778877553    378899999999999999999999999999988874211       01235789999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hh
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PL  169 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~  169 (366)
                      |+++++|++||+|++.                            ...|+|++|+.++...++++|+++++++++.+. .+
T Consensus        74 G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  125 (324)
T cd08292          74 GEGVKGLQVGQRVAVA----------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP  125 (324)
T ss_pred             CCCCCCCCCCCEEEec----------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence            9999999999999863                            136899999999999999999999999998775 56


Q ss_pred             HHHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          170 SVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       170 ~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      .+|+++++..++++|++|||+| +|.+|++++|+|+.+|+ .++++..++++.+.++++|++.++++.  ..++...+.+
T Consensus       126 ~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~  202 (324)
T cd08292         126 LSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTE--QPGWQDKVRE  202 (324)
T ss_pred             HHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCC--CchHHHHHHH
Confidence            7788888778899999999998 59999999999999999 566666777777888889988777643  3456666655


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-----------CCC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-----------RST  316 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~  316 (366)
                      +.  .+.++|++|||+|+. ....++++++++|+++.+|.... ...+.......++.++.++...           ...
T Consensus       203 ~~--~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (324)
T cd08292         203 AA--GGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRM  279 (324)
T ss_pred             Hh--CCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHH
Confidence            43  367899999999986 67888999999999999986532 2223333455678888776543           235


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++++++++.+|.+.+  .+.+.|++  +++.+|++.+.++...||++++
T Consensus       280 ~~~~~~l~~~g~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         280 IAELLTLALKGQLLL--PVEAVFDL--GDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHHHHCCCccC--ccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence            788999999999953  34677888  9999999999988888999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=4.7e-38  Score=264.95  Aligned_cols=315  Identities=18%  Similarity=0.241  Sum_probs=242.1

Q ss_pred             ccCCcccceEEEEeeC----CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccce
Q 017793            8 DEGDKNQNMAAWLLGI----KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC   83 (366)
Q Consensus         8 ~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~   83 (366)
                      ..+|+...|++++...    +.+++++++.|....++|+||.+|+.|||+|+..++|-+...       +++|.|-|+|+
T Consensus        13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr-------P~~PAVgGnEG   85 (354)
T KOG0025|consen   13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR-------PELPAVGGNEG   85 (354)
T ss_pred             ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC-------CCCCcccCCcc
Confidence            4456666677777733    568889999998888889999999999999999999543222       45689999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcccc
Q 017793           84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG  163 (366)
Q Consensus        84 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~a  163 (366)
                      +|+|+.+|+++++|++||+|...                           ....|+|++|.+.+++.++++++.++.+.|
T Consensus        86 v~eVv~vGs~vkgfk~Gd~VIp~---------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~~A  138 (354)
T KOG0025|consen   86 VGEVVAVGSNVKGFKPGDWVIPL---------------------------SANLGTWRTEAVFSESDLIKVDKDIPLASA  138 (354)
T ss_pred             eEEEEEecCCcCccCCCCeEeec---------------------------CCCCccceeeEeecccceEEcCCcCChhhh
Confidence            99999999999999999999864                           245899999999999999999999999999


Q ss_pred             ccch-hhHHHHHHHHh-CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHHHHcCCceeeecCC
Q 017793          164 AMCE-PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDV---QRLSIARNLGADETAKVST  237 (366)
Q Consensus       164 a~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~~~~~~~~~  237 (366)
                      |++. ..+|||.+++. -++++||+|.=.|+ +++|++.||+||+.|++.+-+++..+   +-.+.++.+||++++--.+
T Consensus       139 AT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeee  218 (354)
T KOG0025|consen  139 ATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEE  218 (354)
T ss_pred             heeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHH
Confidence            9997 78999999965 78999998777785 99999999999999996555553333   2334567799999875221


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc-ccCCCceeechHhhhcCcEEEEeecc---
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIFRY---  313 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~---  313 (366)
                      ...   ....+.. .....+.+.|+|+|+. ......+.|.+||.++.+| ++.....++...++++.+.+.|+|..   
T Consensus       219 l~~---~~~~k~~-~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~  293 (354)
T KOG0025|consen  219 LRD---RKMKKFK-GDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWK  293 (354)
T ss_pred             hcc---hhhhhhh-ccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehh
Confidence            110   0111110 1245689999999988 4556669999999999998 56667788889999999999999865   


Q ss_pred             ---------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHH-cCCCceEEEee
Q 017793          314 ---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA-QGGNAIKVMFN  365 (366)
Q Consensus       314 ---------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~-~~~~~gkvvi~  365 (366)
                               .+.++++.+|++.|++....  ....+|  ++...|++... .-...||-+|.
T Consensus       294 ~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L--~~~~tald~~L~~~~~~~Kq~i~  351 (354)
T KOG0025|consen  294 KEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVPL--ADHKTALDAALSKFGKSGKQIIV  351 (354)
T ss_pred             hccCCcHHHHHHHHHHHHHHHcCeecccc--ceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence                     13466789999999994333  234567  77777777533 22333555543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=8.4e-38  Score=288.72  Aligned_cols=295  Identities=19%  Similarity=0.202  Sum_probs=234.0

Q ss_pred             CceEEEEecC----CCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccce--eEEEEEeCCCCCCC
Q 017793           24 KTLKIQPYHL----PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC--AGIIEEVGSEVKSL   97 (366)
Q Consensus        24 ~~~~~~~~~~----p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~--~G~V~~vG~~v~~~   97 (366)
                      +.+++++.|.    |+|++|||||||+|+||||.|++...|.+.       .....|+++|+++  .|.+..+|+++++|
T Consensus        19 ~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~-------~~~~~p~~~g~~~~g~~~~~~v~~~v~~~   91 (338)
T cd08295          19 SDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDD-------SLYLPPFKPGEVITGYGVAKVVDSGNPDF   91 (338)
T ss_pred             cceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCc-------cccCCCcCCCCeEeccEEEEEEecCCCCC
Confidence            5789988877    889999999999999999999988874210       0124577888754  45555688999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecC-CceEECC-CCCCcc-ccccch-hhHHHH
Q 017793           98 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLP-DNVSLE-EGAMCE-PLSVGV  173 (366)
Q Consensus        98 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~-~~~~~~P-~~~~~~-~aa~~~-~~~~a~  173 (366)
                      ++||+|+.                               .|+|+||+++++ ..++++| +++++. +++.+. ++.|||
T Consensus        92 ~vGd~V~~-------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~  140 (338)
T cd08295          92 KVGDLVWG-------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAY  140 (338)
T ss_pred             CCCCEEEe-------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHH
Confidence            99999973                               368999999999 7999995 668875 566554 788999


Q ss_pred             HHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHH
Q 017793          174 HACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       174 ~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +++. ..++++|++|||+| +|++|++++|+|+.+|+ .++++++++++.+++++ +|++.++++.. ..++.+.+.+..
T Consensus       141 ~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~  218 (338)
T cd08295         141 AGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAALKRYF  218 (338)
T ss_pred             HHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHHHHhC
Confidence            9984 58899999999999 59999999999999999 68888889999999998 99998887543 235655555442


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc------eeechHhhhcCcEEEEeecc------CCChH
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM------TVALTPAAAREVDVIGIFRY------RSTWP  318 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~  318 (366)
                         ++++|++||++|+ ..+..++++|+++|+++.+|......      ..+...+..+++++.++...      .+.++
T Consensus       219 ---~~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  294 (338)
T cd08295         219 ---PNGIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLE  294 (338)
T ss_pred             ---CCCcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHH
Confidence               4689999999997 57889999999999999998543211      12234566677788775432      23477


Q ss_pred             HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++++.+|.+++  .+...|++  +++++|++.+.++...||+|+++
T Consensus       295 ~~~~l~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         295 EMSGYIKEGKLKY--VEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHCCCeEc--eeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence            8899999999943  34456888  99999999999999999999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.1e-37  Score=286.93  Aligned_cols=297  Identities=20%  Similarity=0.245  Sum_probs=235.5

Q ss_pred             cceEEEEeeC-------CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793           14 QNMAAWLLGI-------KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI   86 (366)
Q Consensus        14 ~~~~~~~~~~-------~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   86 (366)
                      +|+++++.++       +.+++++.|.|+|++|||+|||.++|||+.|.+...         .  ....|.++|+|++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~---------~--~~~~p~v~G~e~~G~   70 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK---------R--LNEGDTMIGTQVAKV   70 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc---------c--CCCCCcEecceEEEE
Confidence            3666666641       458999999999999999999999999988764211         1  124588999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC---ceEECCCCCC--c-
Q 017793           87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK---LCYKLPDNVS--L-  160 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~---~~~~~P~~~~--~-  160 (366)
                      |++   .+++|++||||+.                               .++|++|+.++.+   .++++|++++  + 
T Consensus        71 V~~---~~~~~~~Gd~V~~-------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~  116 (329)
T cd08294          71 IES---KNSKFPVGTIVVA-------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLP  116 (329)
T ss_pred             Eec---CCCCCCCCCEEEe-------------------------------eCCeeeEEEECCccccceEECCccccccCC
Confidence            985   4567999999984                               2578999999999   9999999988  2 


Q ss_pred             ---cccccchhhHHHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec
Q 017793          161 ---EEGAMCEPLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  235 (366)
Q Consensus       161 ---~~aa~~~~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  235 (366)
                         ..++...++.|||+++ +..++++|++|||+| +|++|++++|+|+..|+ .++++++++++.++++++|++.++++
T Consensus       117 ~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~  195 (329)
T cd08294         117 PSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNY  195 (329)
T ss_pred             hHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence               2232334888999998 568899999999998 69999999999999999 68888899999999999999998886


Q ss_pred             CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC----c---eeechHhhhcCcEEE
Q 017793          236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE----M---TVALTPAAAREVDVI  308 (366)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~---~~~~~~~~~~~~~~~  308 (366)
                      ..  +++.+.++++   .++++|++||++|+ ..+..++++++++|+++.+|.....    .   ......+..+++++.
T Consensus       196 ~~--~~~~~~v~~~---~~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~  269 (329)
T cd08294         196 KT--VSLEEALKEA---APDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKME  269 (329)
T ss_pred             CC--ccHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEE
Confidence            43  5666666544   24689999999997 5789999999999999998843211    0   122334667788888


Q ss_pred             Eeecc------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          309 GIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       309 ~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++..      .+.++++++++++|.+.+.  ....|++  +++++|++.+.+++..||+|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         270 GFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGF--ENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             EEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            76543      2246788999999999544  3355788  99999999999999999999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3e-37  Score=283.65  Aligned_cols=319  Identities=26%  Similarity=0.416  Sum_probs=256.8

Q ss_pred             ceEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           15 NMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        15 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      |+++++.++  ..+++++.+.|.++++||+||+.++++|++|+....+         .....+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~---------~~~~~~~~~~g~e~~G~v~~vG~   71 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA---------VKVKPMPHIPGAEFAGVVEEVGD   71 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC---------CCCCCCCeecccceeEEEEEECC
Confidence            567777644  4788888888889999999999999999999987662         11123477899999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      ++++|++||+|++.+...|++|.+|..|+.++|++..+++. ...|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus        72 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~  150 (325)
T cd08264          72 HVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT  150 (325)
T ss_pred             CCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence            99999999999999888999999999999999998765543 357999999999999999999999999888775 6788


Q ss_pred             HHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          172 GVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ||+++...+++++++++|+|+ |++|++++++|+.+|+ .++++.    +.+.++++|++.+++..    +....+.++ 
T Consensus       151 a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~-  220 (325)
T cd08264         151 AYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEI-  220 (325)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch----HHHHHHHHH-
Confidence            999987788999999999995 9999999999999999 566664    23677889988776542    123333333 


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCC
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK  328 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~  328 (366)
                        . +++|+++|++|+ ..+..++++|+++|+++.+|... ....++...+..++.++.+...+ ++.++++++++....
T Consensus       221 --~-~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  296 (325)
T cd08264         221 --T-KMADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK  296 (325)
T ss_pred             --h-CCCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC
Confidence              2 679999999996 58899999999999999998642 22334445566667777776544 557888999986433


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHHcCCCceEEE
Q 017793          329 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM  363 (366)
Q Consensus       329 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvv  363 (366)
                          ..+.+.|++  +++++|++.+.++...+|++
T Consensus       297 ----~~~~~~~~~--~~~~~a~~~~~~~~~~~kv~  325 (325)
T cd08264         297 ----VKVWKTFKL--EEAKEALKELFSKERDGRIL  325 (325)
T ss_pred             ----ceeEEEEcH--HHHHHHHHHHHcCCCccccC
Confidence                335678888  99999999999887777753

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-36  Score=281.48  Aligned_cols=334  Identities=28%  Similarity=0.447  Sum_probs=270.7

Q ss_pred             ceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~---~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      |+++++.   .+..+.+++.+.|.+.+++|+|++.++++|++|+.+..|...       ....+|.++|||++|+|+.+|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~G   73 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG-------IKLPLPHILGSDGAGVVEAVG   73 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC-------CCCCCCeecccceEEEEEEeC
Confidence            5778877   445788888888888999999999999999999988774210       113457889999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++++.|++||+|++.+..+|++|.+|..+.++.|+...+.+. ...|+|++|+.++.+.++++|+++++++++.+. .+.
T Consensus        74 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~  152 (342)
T cd08266          74 PGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL  152 (342)
T ss_pred             CCCCCCCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence            999999999999999999999999999999999998766553 357899999999999999999999998888775 677


Q ss_pred             HHHHHH-HhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +|++++ +..+++++++++|+|+ +.+|++++++++..|+ .++.+++++++.+.+++++.+.+++.  ...++...+..
T Consensus       153 ~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  229 (342)
T cd08266         153 TAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRE  229 (342)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHH
Confidence            888887 4578899999999984 7999999999999999 57777888888888888887766543  22344444443


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS  326 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  326 (366)
                      ..  .+.++|++++++|.. .+...+++++++|+++.++..... ........+.++..+.+.... ...+.++++++++
T Consensus       230 ~~--~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  306 (342)
T cd08266         230 LT--GKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFR  306 (342)
T ss_pred             Hh--CCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHc
Confidence            32  246799999999964 788899999999999999855432 222222345667777776544 4568889999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.+  .+.+++.|++  ++++++++.+.++...+|++++.
T Consensus       307 ~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         307 GKL--KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             CCc--ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            988  4557788888  99999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5e-37  Score=285.07  Aligned_cols=329  Identities=23%  Similarity=0.325  Sum_probs=253.9

Q ss_pred             ceEEEEeeC---CceEEEE-ecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccc-----------ccc-CccCCCCcc
Q 017793           15 NMAAWLLGI---KTLKIQP-YHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM-----------RCA-NFIVKKPMV   78 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~-~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~-----------~~~-~~~~~~p~i   78 (366)
                      ||++++.++   ..+.+.+ .+.|.+.+++|+|||.++++|++|+.+..|.+....           +.. ......|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            567777654   3456654 577788999999999999999999998875431100           000 012456889


Q ss_pred             cccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCC
Q 017793           79 IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV  158 (366)
Q Consensus        79 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~  158 (366)
                      +|||++|+|+++|+++++|++||+|++.+...|+.|..|.        .+.+++ ...+|+|++|+.++.+.++++|+++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~--------~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~  151 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA--------DIDYIG-SERDGGFAEYTVVPAENAYPVNSPL  151 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc--------cccccC-CCCCccceEEEEecHHHceeCCCCC
Confidence            9999999999999999999999999998777777765532        222222 1236999999999999999999999


Q ss_pred             Cccccccch-hhHHHHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          159 SLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       159 ~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      ++.+++.+. .+.+||++++..++++++++||+|+ |++|++++|+|+.+|++ +++++.++ +.+.++++|++.+.+. 
T Consensus       152 ~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~-  228 (350)
T cd08274         152 SDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR-  228 (350)
T ss_pred             CHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC-
Confidence            998887765 7888999887788999999999995 99999999999999994 66666554 7888899998754432 


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-C
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-R  314 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~  314 (366)
                       ....+.+  ...  +.+.++|++||++|+. .++.++++++++|+++.+|..... ..++...++.++.++.++... .
T Consensus       229 -~~~~~~~--~~~--~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (350)
T cd08274         229 -DAPLLAD--AKA--LGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTR  302 (350)
T ss_pred             -CCccHHH--HHh--hCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCH
Confidence             2222222  122  2367899999999975 788999999999999999854332 234444556778888877665 5


Q ss_pred             CChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       315 ~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +.++++++++.++.+  .+.+.+.|++  ++++++++.+.++...||++++
T Consensus       303 ~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         303 EVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             HHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEe
Confidence            678899999999998  4456678888  9999999999999889999986

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=5e-37  Score=261.43  Aligned_cols=294  Identities=18%  Similarity=0.168  Sum_probs=239.4

Q ss_pred             eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC--CCCCCCCC
Q 017793           22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG--SEVKSLEV   99 (366)
Q Consensus        22 ~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG--~~v~~~~~   99 (366)
                      .+++++++++++|+|++||||+|+.|.+++|.-..-++     .    ....-+|+-+|...+|.++...  |+.++|++
T Consensus        23 ~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~-----d----~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~   93 (340)
T COG2130          23 VPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMS-----D----APSYAPPVELGEVMVGGTVAKVVASNHPGFQP   93 (340)
T ss_pred             CCCCceeEeccCCCCCcCceEEEEEEeccCHHHeeccc-----C----CcccCCCcCCCceeECCeeEEEEecCCCCCCC
Confidence            33789999999999999999999999999995543333     1    1123356667766665555433  56788999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCC---CccccccchhhHHHHHHH
Q 017793          100 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV---SLEEGAMCEPLSVGVHAC  176 (366)
Q Consensus       100 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~---~~~~aa~~~~~~~a~~~l  176 (366)
                      ||.|+.                               ..+|+||..++.+.+.|++++.   ++....+-++..|||.+|
T Consensus        94 GD~V~~-------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gL  142 (340)
T COG2130          94 GDIVVG-------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGL  142 (340)
T ss_pred             CCEEEe-------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHH
Confidence            999984                               4689999999999999999764   333334557899999998


Q ss_pred             -HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          177 -RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       177 -~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                       +.++.|+|++|+|.| +|++|..+.|+||..|+ +||++..++||.+++++ +|.|.++||.+  +++.+.+++.+   
T Consensus       143 l~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a~---  216 (340)
T COG2130         143 LDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEAC---  216 (340)
T ss_pred             HHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHHC---
Confidence             459999999999997 79999999999999999 89999999999999988 99999999876  48888887765   


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc--ee-----echHhhhcCcEEEEeecc-------CCChHH
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TV-----ALTPAAAREVDVIGIFRY-------RSTWPL  319 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~-----~~~~~~~~~~~~~~~~~~-------~~~~~~  319 (366)
                      +.|+|+.||++|++ .++..+..|..++|+..+|..+.-.  ..     .+..++.++.++.|+...       .+.+++
T Consensus       217 P~GIDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~  295 (340)
T COG2130         217 PKGIDVYFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRE  295 (340)
T ss_pred             CCCeEEEEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHH
Confidence            79999999999976 9999999999999999999543211  11     122366778999998762       356788


Q ss_pred             HHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          320 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +..|+.+|+++.+.  +.+-+|  |++++||.-|.+|+.+||+|+++
T Consensus       296 l~~wv~~GKi~~~e--ti~dGl--EnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         296 LGGWVKEGKIQYRE--TIVDGL--ENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             HHHHHHcCceeeEe--eehhhh--hccHHHHHHHhcCCccceEEEEe
Confidence            99999999997666  344578  99999999999999999999975

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=4.1e-36  Score=276.67  Aligned_cols=325  Identities=28%  Similarity=0.429  Sum_probs=266.3

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        16 ~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      |++++.++ ..+.+++.|.|.+.+++++|++.++++|+.|+....|..        ....+|.++|+|++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~--------~~~~~p~~~g~e~~G~v~~~g~~~   72 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDW--------GGSKYPLVPGHEIVGEVVEVGAGV   72 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCC--------CCCCCCcccCccceEEEEEECCCC
Confidence            57788877 689999999999999999999999999999998877321        113457789999999999999999


Q ss_pred             CCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793           95 KSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  172 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a  172 (366)
                      ++|++||+|++.+. .+|+.|.+|..+.+++|++..+.+. ...|+|++|+.++.+.++++|+++++++++.+. .+.+|
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta  151 (330)
T cd08245          73 EGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITV  151 (330)
T ss_pred             cccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHH
Confidence            99999999987554 5799999999999999998654442 247999999999999999999999999998665 67889


Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      |.+++..+++++++|||+|+|.+|++++++|+..|+ .++++++++++.++++++|++.+++...  .+....       
T Consensus       152 ~~~l~~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-------  221 (330)
T cd08245         152 YSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQA-------  221 (330)
T ss_pred             HHHHHhhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHHh-------
Confidence            988877889999999999988899999999999999 6888888999999999999887766432  222111       


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce-eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID  330 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  330 (366)
                      ..+++|+++|+++.......++++|+++|+++.++....... .....+..++.++.+.... ...+++++++++++.+.
T Consensus       222 ~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~  301 (330)
T cd08245         222 AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVK  301 (330)
T ss_pred             ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCc
Confidence            135799999998877788999999999999999985432211 1133456677777777654 45788899999999984


Q ss_pred             CCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                        + ..+.+++  ++++++++.+.++...||+|+
T Consensus       302 --~-~~~~~~~--~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         302 --P-MIETFPL--DQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             --c-eEEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence              3 3467888  999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.8e-36  Score=274.52  Aligned_cols=298  Identities=36%  Similarity=0.652  Sum_probs=246.1

Q ss_pred             ceEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           15 NMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        15 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      |+++++.++  ..++++++|.|++.+++|+||+.++++|++|+....|.+        .....|.++|+|++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~--------~~~~~p~~~G~e~~G~V~~vG~   72 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDY--------DPVETPVVLGHEFSGTIVEVGP   72 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCC--------CcCCCCeeeccceEEEEEEECC
Confidence            466777644  469999999999999999999999999999998877321        1234578899999999999999


Q ss_pred             CCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHH
Q 017793           93 EVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV  171 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~  171 (366)
                      +++.|++||+|++.+. .+|+.|.+|..+..+.|+...+++. ...|+|+||+.++.+.++++|+++++++++...++.+
T Consensus        73 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~  151 (306)
T cd08258          73 DVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGT-QADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAV  151 (306)
T ss_pred             CcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeee-cCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHH
Confidence            9999999999999775 6899999999999999987554432 3479999999999999999999999998885568888


Q ss_pred             HHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEE--cCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          172 GVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       172 a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      ||+++ ...+++++++|||.|+|.+|++++|+|+..|++ ++++  ++++++.++++++|++.+ ++  ...++...+..
T Consensus       152 a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~l~~  227 (306)
T cd08258         152 AVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAELVNE  227 (306)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHHHHH
Confidence            99887 457889999999988899999999999999994 6555  345568888899999776 54  33566666655


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS  326 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  326 (366)
                      +.  .+.++|++||++|....+...+++|+++|+++.+|... ....++...++++++++.|++.+ .++++++++++++
T Consensus       228 ~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  305 (306)
T cd08258         228 IT--DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLAS  305 (306)
T ss_pred             Hc--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhc
Confidence            43  35689999999987778899999999999999998765 23444556677899999999987 7789999999987


Q ss_pred             C
Q 017793          327 G  327 (366)
Q Consensus       327 g  327 (366)
                      |
T Consensus       306 ~  306 (306)
T cd08258         306 G  306 (306)
T ss_pred             C
Confidence            5

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3e-35  Score=268.68  Aligned_cols=300  Identities=30%  Similarity=0.455  Sum_probs=242.3

Q ss_pred             eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhh-hhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017793           22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHF-KVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG  100 (366)
Q Consensus        22 ~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~-~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G  100 (366)
                      +++.++++++|.|++.++||+||+.++++|+.|+... .|....      .....|.++|+|++|+|+++|++++++++|
T Consensus         3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~------~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   76 (312)
T cd08269           3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWF------VYPAEPGGPGHEGWGRVVALGPGVRGLAVG   76 (312)
T ss_pred             CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCc------ccCCCCcccceeeEEEEEEECCCCcCCCCC
Confidence            4567999999999999999999999999999999876 532100      012247899999999999999999999999


Q ss_pred             CEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc-hhhHHHHHHHHhC
Q 017793          101 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRA  179 (366)
Q Consensus       101 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~-~~~~~a~~~l~~~  179 (366)
                      |+|++.                             ..|+|++|+.++.+.++++|+++  ..++.. .++.+++++++..
T Consensus        77 d~V~~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~  125 (312)
T cd08269          77 DRVAGL-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRG  125 (312)
T ss_pred             CEEEEe-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhc
Confidence            999863                             25899999999999999999998  233333 5778888888888


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ++++++++||+|+|.+|++++|+|+..|++.++++.+++++.++++++|++.+++.  ...++...+.++.  .+.++|+
T Consensus       126 ~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~--~~~~vd~  201 (312)
T cd08269         126 WIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELT--GGAGADV  201 (312)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHc--CCCCCCE
Confidence            89999999999989999999999999999548888888889999999999877653  3356666665543  3568999


Q ss_pred             EEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-----CCChHHHHHHHHCCCCCCCC
Q 017793          260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKP  333 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~~~~~~  333 (366)
                      ++||+|+.......+++|+++|+++.+|.... ...+....+.+++.++.++...     .+.+++++++++++.+.+..
T Consensus       202 vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  281 (312)
T cd08269         202 VIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGS  281 (312)
T ss_pred             EEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchh
Confidence            99999887788999999999999999985432 2233334567788887776543     35788999999999985443


Q ss_pred             ceEEEecCChhhHHHHHHHHHcCCC-ceEEEe
Q 017793          334 LITHRFGFTQKEIEDAFEISAQGGN-AIKVMF  364 (366)
Q Consensus       334 ~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi  364 (366)
                      .+.+.|++  ++++++++.+.+++. .+|+++
T Consensus       282 ~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         282 LLTHEFPL--EELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             heeeeecH--HHHHHHHHHHHhCCCCceEEEe
Confidence            45677888  999999999999855 689886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.5e-35  Score=273.52  Aligned_cols=298  Identities=19%  Similarity=0.287  Sum_probs=234.0

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017793           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR  102 (366)
Q Consensus        23 ~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~  102 (366)
                      ++.+++.++|.|+|+++||+|||.++++|+.|+.+..|..        ....+|.++|+|++|+|+++|++++.|++||+
T Consensus        14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   85 (336)
T TIGR02817        14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMA--------PEAGQPKILGWDAAGVVVAVGDEVTLFKPGDE   85 (336)
T ss_pred             cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCC--------CCCCCCcccceeeEEEEEEeCCCCCCCCCCCE
Confidence            4578888999999999999999999999999998877321        11345788999999999999999999999999


Q ss_pred             EEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHH-HhCC
Q 017793          103 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRAN  180 (366)
Q Consensus       103 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~  180 (366)
                      |+...                         .....|+|++|++++.+.++++|+++++++++.++ ...+||+++ ...+
T Consensus        86 V~~~~-------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~  140 (336)
T TIGR02817        86 VWYAG-------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLG  140 (336)
T ss_pred             EEEcC-------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcC
Confidence            98531                         01236999999999999999999999999998776 778899988 4577


Q ss_pred             CCC-----CCEEEEEC-CCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          181 VGP-----ETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       181 ~~~-----~~~vlI~G-~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +++     +++|||+| +|++|++++|+|+.+ |+ .|+++.+++++.++++++|++.++++..   ++...+.++   .
T Consensus       141 ~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~---~~~~~i~~~---~  213 (336)
T TIGR02817       141 INDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK---PLKAQLEKL---G  213 (336)
T ss_pred             CCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC---CHHHHHHHh---c
Confidence            776     99999998 699999999999998 98 6888888889999999999998887532   455555542   3


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-------------CCChHHH
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------------RSTWPLC  320 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~  320 (366)
                      ++++|+++|++++.......+++++++|+++.++...   .++...+..++..+.+....             ...++++
T Consensus       214 ~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (336)
T TIGR02817       214 LEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRV  290 (336)
T ss_pred             CCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHH
Confidence            5689999999877678899999999999999875321   22222333343444332110             1347889


Q ss_pred             HHHHHCCCCCCCCceEEEec-CChhhHHHHHHHHHcCCCceEEEee
Q 017793          321 IEFLRSGKIDVKPLITHRFG-FTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       321 ~~~l~~g~~~~~~~~~~~~~-l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++++.++.+.  +.+.+.++ ++.+++++|++.+.+++..||++++
T Consensus       291 ~~l~~~~~l~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       291 ARLVDAGKIR--TTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHCCCee--ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            9999999884  44444554 2238999999999999999999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.8e-35  Score=273.57  Aligned_cols=313  Identities=22%  Similarity=0.286  Sum_probs=243.3

Q ss_pred             ceEEEEeeCCc----eEEEEecCCCCCC-CcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           15 NMAAWLLGIKT----LKIQPYHLPTLGP-QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        15 ~~~~~~~~~~~----~~~~~~~~p~~~~-~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      ||+.++..++.    +.+++.|.|+|.+ ++|+||+.++|+|++|+....|......  ... ...|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~--~~~-~~~~~~~g~e~~G~V~~   77 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKP--PTT-PEPPAVGGNEGVGEVVK   77 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCC--ccc-CCCCCCCCcceEEEEEE
Confidence            67888886643    8999999998887 9999999999999999998874321000  000 12577999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~  168 (366)
                      +|++++.|++||+|++..                           ...|+|++|+.++.+.++++|+++++++++.+. .
T Consensus        78 vG~~v~~~~~Gd~V~~~~---------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~  130 (341)
T cd08290          78 VGSGVKSLKPGDWVIPLR---------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVN  130 (341)
T ss_pred             eCCCCCCCCCCCEEEecC---------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHHhhcc
Confidence            999999999999998631                           125999999999999999999999999998775 7


Q ss_pred             hHHHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh----hHHHHHHHcCCceeeecCCC-Ccc
Q 017793          169 LSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV----QRLSIARNLGADETAKVSTD-IED  241 (366)
Q Consensus       169 ~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~lg~~~~~~~~~~-~~~  241 (366)
                      +.+||+++.. ..++++++|||+| +|++|++++|+|+..|++ ++++..++    ++.++++++|++.++++... ..+
T Consensus       131 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  209 (341)
T cd08290         131 PCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEELRSLL  209 (341)
T ss_pred             HHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCccccccc
Confidence            7889998854 7789999999998 599999999999999995 55554444    67888899999988775331 014


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-------
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------  313 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------  313 (366)
                      +...+..+.   ++++|++|||+|+. .....+++++++|+++.+|.... ...++....+.++.++.+....       
T Consensus       210 ~~~~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (341)
T cd08290         210 ATELLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRAN  285 (341)
T ss_pred             HHHHHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcC
Confidence            555554432   23899999999976 56778899999999999985432 2233333456777888876543       


Q ss_pred             ----CCChHHHHHHHHCCCCCCCCceEEEe---cCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 ----RSTWPLCIEFLRSGKIDVKPLITHRF---GFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 ----~~~~~~~~~~l~~g~~~~~~~~~~~~---~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                          ...++++++++.++.+.+  .....+   ++  ++++++++.+.++...||+|+++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         286 PEEKEDMLEELAELIREGKLKA--PPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHHHHHHHHHHHcCCccC--CcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence                124778899999999843  344455   77  99999999999999999999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=6.9e-35  Score=267.73  Aligned_cols=311  Identities=23%  Similarity=0.302  Sum_probs=246.9

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++..+   ..+++.+.+.|.+.+++|+|++.++++|++|+....|...     .......|.++|+|++|+|+++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-----~~~~~~~p~~~g~e~~G~v~~~G   75 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGP-----GPFPPELPYVPGGEVAGVVDAVG   75 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCC-----CCCCCCCCcCCccceEEEEEEeC
Confidence            567777643   4577778888888999999999999999999988774321     11123457889999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++++++++||+|++...                          ...|+|++|+.++.+.++++|+++++++++.+. .+.
T Consensus        76 ~~v~~~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~  129 (324)
T cd08244          76 PGVDPAWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGR  129 (324)
T ss_pred             CCCCCCCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHH
Confidence            99999999999986421                          137899999999999999999999999988765 677


Q ss_pred             HHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +||..++..++++++++||+| +|++|++++++|+..|+ .++++++++++.+.++++|++.++++.  ..++...+.+.
T Consensus       130 ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~  206 (324)
T cd08244         130 TALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREA  206 (324)
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHH
Confidence            776555778899999999998 69999999999999999 688888889999999999998776643  34555555443


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeecc-------CCChHHHH
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-------RSTWPLCI  321 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  321 (366)
                      .  .++++|+++|++|+. ....++++++++|+++.+|...... .++....+.++.++.+....       .+.+++++
T Consensus       207 ~--~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (324)
T cd08244         207 L--GGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARAL  283 (324)
T ss_pred             c--CCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHH
Confidence            2  356899999999976 5688999999999999998654322 22323445677777766543       24577788


Q ss_pred             HHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          322 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       322 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++.++.+  .+.+.+.|++  +++++|++.+.++...||++++.
T Consensus       284 ~~l~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         284 AEAAAGRL--VPVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHCCCc--cCccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999988  4456678888  99999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.2e-35  Score=269.73  Aligned_cols=299  Identities=27%  Similarity=0.393  Sum_probs=225.0

Q ss_pred             ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE---EEEeC-CCCCCCCCC
Q 017793           25 TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI---IEEVG-SEVKSLEVG  100 (366)
Q Consensus        25 ~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~---V~~vG-~~v~~~~~G  100 (366)
                      ....++.|+|.|.+++++|++.++++||.|+.+..|......    ....+|.+.+.++.|.   +...| ..+..+..|
T Consensus        19 ~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~----~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g   94 (347)
T KOG1198|consen   19 VLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIP----LGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHG   94 (347)
T ss_pred             eEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCC----CccCCCCccccccCCceeEEeccccccccceEee
Confidence            345568999999999999999999999999999996654432    1235676666555555   33444 233446667


Q ss_pred             CEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHHh-
Q 017793          101 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-  178 (366)
Q Consensus       101 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-  178 (366)
                      |++..                            ....|+|+||+.+++..++++|+++++.+||.++ ...+||.++.. 
T Consensus        95 ~~~~~----------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~  146 (347)
T KOG1198|consen   95 DAVVA----------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQL  146 (347)
T ss_pred             eEEee----------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhc
Confidence            66653                            2468999999999999999999999999999887 88899999854 


Q ss_pred             C------CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          179 A------NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       179 ~------~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      .      ++++|++|||+| +|++|++|+|+|+..|+ ..+++.+++++.++++++|++.+++|++  +++.+.+++.  
T Consensus       147 ~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~--  221 (347)
T KOG1198|consen  147 APGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY--  221 (347)
T ss_pred             cccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh--
Confidence            6      699999999997 78999999999999996 3455558999999999999999999866  5666655443  


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC---CCceee--chHhh--------hcCcEEE--EeeccCCC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK---TEMTVA--LTPAA--------AREVDVI--GIFRYRST  316 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~---~~~~~~--~~~~~--------~~~~~~~--~~~~~~~~  316 (366)
                       ++.+||+||||+|+. .......++..+|+...++...   ......  +..+.        .+.....  .+....+.
T Consensus       222 -~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (347)
T KOG1198|consen  222 -TGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEY  299 (347)
T ss_pred             -cCCCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHH
Confidence             278999999999986 5666777888777644444222   111111  00000        0011111  11111567


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++.+.++++++++  ++.+.+.|++  +++.+|++.+.++...||+++.+
T Consensus       300 l~~l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  300 LKALVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             HHHHHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence            8899999999988  8888999999  99999999999999999999864

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=265.75  Aligned_cols=308  Identities=23%  Similarity=0.328  Sum_probs=244.5

Q ss_pred             cceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           14 QNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        14 ~~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      +||++++.+++   .+++++.+.|.+.++|++|||.++++|+.|+....|..       ......|.++|+|++|+|+++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~v~~v   73 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKY-------PPPPGSSEILGLEVAGYVEDV   73 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCC-------CCCCCCCcccceeeEEEEEEe
Confidence            58888888663   57778888888999999999999999999998877321       011234578999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hh
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PL  169 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~  169 (366)
                      |++++++++||+|+..                            ..+|+|++|++++.+.++++|+++++++++.+. .+
T Consensus        74 G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~  125 (334)
T PTZ00354         74 GSDVKRFKEGDRVMAL----------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF  125 (334)
T ss_pred             CCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence            9999999999999853                            135899999999999999999999998887664 77


Q ss_pred             HHHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcc-hHHHH
Q 017793          170 SVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED-VDTDV  246 (366)
Q Consensus       170 ~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~~  246 (366)
                      .+|++++.. .+++++++|||+| +|++|++++++|+..|+. ++.+.+++++.++++++|++.+++...  .+ +...+
T Consensus       126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~  202 (334)
T PTZ00354        126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIRYPD--EEGFAPKV  202 (334)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecCC--hhHHHHHH
Confidence            889998854 7899999999998 699999999999999994 555778889999999999987776432  22 55555


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-e-eechHhhhcCcEEEEeeccC----------
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-T-VALTPAAAREVDVIGIFRYR----------  314 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~----------  314 (366)
                      .+..  .+.++|++||++++ ..+..+++++.++|+++.++...... . +....+..+..++.++....          
T Consensus       203 ~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (334)
T PTZ00354        203 KKLT--GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLV  279 (334)
T ss_pred             HHHh--CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHH
Confidence            5443  25689999999985 48889999999999999998543321 1 44444555666777754331          


Q ss_pred             -CChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          315 -STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       315 -~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                       +.+++++++++++.+  .+.+.+.+++  ++++++++.+.++...||+++++
T Consensus       280 ~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        280 ASFEREVLPYMEEGEI--KPIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             HHHHHHHHHHHHCCCc--cCccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence             224678889999988  4446677888  99999999999988889999864

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-34  Score=262.62  Aligned_cols=293  Identities=23%  Similarity=0.294  Sum_probs=237.3

Q ss_pred             ceEEEEee--CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           15 NMAAWLLG--IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        15 ~~~~~~~~--~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      ||+.++.+  |..+++++.|.|.++++||+||+.++++|+.|+....            ....|.++|+|++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~------------~~~~~~~~g~e~~G~v~~~G~   68 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAA------------ERPDGAVPGWDAAGVVERAAA   68 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhc------------cCCCCCcccceeEEEEEEeCC
Confidence            45666664  4577888999999999999999999999999997654            112367899999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      +++.|++||+|+..                            ...|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus        69 ~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~t  120 (305)
T cd08270          69 DGSGPAVGARVVGL----------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVT  120 (305)
T ss_pred             CCCCCCCCCEEEEe----------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHH
Confidence            99999999999853                            136999999999999999999999999988776 7789


Q ss_pred             HHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          172 GVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ||+++......++++++|+|+ |++|++++++|+..|+ .++.+++++++.+.++++|++..++...          ++.
T Consensus       121 a~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~  189 (305)
T cd08270         121 ALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------ELS  189 (305)
T ss_pred             HHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----------ccc
Confidence            999986644456999999985 9999999999999999 6888888899999999999876543211          111


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhh--cCcEEEEeecc-----CCChHHHHH
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAA--REVDVIGIFRY-----RSTWPLCIE  322 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~  322 (366)
                         ++++|+++|++|+. ....++++|+.+|+++.+|..... ...+...+..  ++.++.+.+..     .+.++.+++
T Consensus       190 ---~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
T cd08270         190 ---GAPVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLG  265 (305)
T ss_pred             ---CCCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHH
Confidence               35799999999976 788899999999999999865422 2233333333  46777766543     346788999


Q ss_pred             HHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          323 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       323 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++++.  +.+.+.+++  ++++++++.+.++...||+++++
T Consensus       266 ~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         266 LVAAGRLD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHCCCcc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999994  446678888  99999999999999999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=8e-35  Score=268.92  Aligned_cols=311  Identities=27%  Similarity=0.391  Sum_probs=240.0

Q ss_pred             ceEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           15 NMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        15 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      |+++++.++  ..++++++|.|.|+++||+||+.++++|++|+....+.         .....|.++|+|++|+|+.+|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~---------~~~~~~~~~g~e~~G~v~~vG~   71 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYG---------FIPSYPAILGCDFAGTVVEVGS   71 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecc---------cccCCCceeeeeeeEEEEEeCC
Confidence            578888877  78899999999999999999999999999999876521         1123577899999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      +++.|++||+|+..+...++                    ....+|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus        72 ~v~~~~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t  131 (339)
T cd08249          72 GVTRFKVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT  131 (339)
T ss_pred             CcCcCCCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence            99999999999976432211                    11247999999999999999999999999998776 7889


Q ss_pred             HHHHHH-hCCC----------CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCC
Q 017793          172 GVHACR-RANV----------GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI  239 (366)
Q Consensus       172 a~~~l~-~~~~----------~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~  239 (366)
                      ||+++. ..++          ++++++||+| +|++|++++++|+..|+ .++++. ++++.++++++|++.++++.  .
T Consensus       132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~--~  207 (339)
T cd08249         132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYH--D  207 (339)
T ss_pred             HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECC--C
Confidence            999874 3433          7899999999 58999999999999999 566665 56888888999998887753  3


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcC--CceEEEEcccCCCceeechHhhhcCcEEEEeec---c-
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP--GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR---Y-  313 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~-  313 (366)
                      .++...+..+   .++++|++||++|++..+..+++++++  +|+++.+|......... ...............   . 
T Consensus       208 ~~~~~~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  283 (339)
T cd08249         208 PDVVEDIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKVKFVLGYTVFGEIPED  283 (339)
T ss_pred             chHHHHHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceEEEEEeeeeccccccc
Confidence            5666666544   357799999999975688999999999  99999998654321110 111111111111110   1 


Q ss_pred             ----CCChHHHHHHHHCCCCCCCCceEEEec--CChhhHHHHHHHHHcCC-CceEEEeeC
Q 017793          314 ----RSTWPLCIEFLRSGKIDVKPLITHRFG--FTQKEIEDAFEISAQGG-NAIKVMFNL  366 (366)
Q Consensus       314 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~--l~~~~~~~a~~~~~~~~-~~gkvvi~~  366 (366)
                          ...+++++++++++.+.+.+  ...++  +  +++++|++.+.+++ ..+|+|+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~--~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         284 REFGEVFWKYLPELLEEGKLKPHP--VRVVEGGL--EGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             ccchHHHHHHHHHHHHcCCccCCC--ceecCCcH--HHHHHHHHHHHCCCccceEEEEeC
Confidence                24577799999999995543  34455  6  99999999999998 899999975

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=1.4e-34  Score=266.13  Aligned_cols=309  Identities=24%  Similarity=0.269  Sum_probs=240.9

Q ss_pred             cceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           14 QNMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        14 ~~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      +|++..+.++   ..+.++++|.|.|+++||+||+.++|+|++|+.+..|.+        .....|.++|+|++|+|+.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~v~~v   72 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLY--------PPPSLPSGLGTEAAGVVSKV   72 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCC--------CCCCCCCccCcceEEEEEEe
Confidence            3667777644   578999999999999999999999999999998776321        01235778999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hh
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PL  169 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~  169 (366)
                      |++++.+++||+|++.                           ....|+|++|+.++.+.++++|+++++++++.+. ..
T Consensus        73 G~~v~~~~~Gd~V~~~---------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~  125 (327)
T PRK10754         73 GSGVKHIKVGDRVVYA---------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKG  125 (327)
T ss_pred             CCCCCCCCCCCEEEEC---------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHH
Confidence            9999999999999742                           1135899999999999999999999999888664 66


Q ss_pred             HHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          170 SVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       170 ~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      .+|+.++. .+++++|++++|+| +|.+|++++|+|+.+|+ .+++++.++++.++++++|++.+++.  ...++.+.+.
T Consensus       126 ~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~  202 (327)
T PRK10754        126 LTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINY--REENIVERVK  202 (327)
T ss_pred             HHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC--CCCcHHHHHH
Confidence            78888874 47899999999997 79999999999999999 57788888999999999999877664  3356666665


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcC------cEEEEeeccC----CC
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAARE------VDVIGIFRYR----ST  316 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~------~~~~~~~~~~----~~  316 (366)
                      ++.  .++++|++|||+++. .....+++++++|+++.+|..... .......+..+.      ..+.+.....    ..
T Consensus       203 ~~~--~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (327)
T PRK10754        203 EIT--GGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEA  279 (327)
T ss_pred             HHc--CCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHH
Confidence            553  357899999999964 778899999999999999855422 112222221111      1122222111    23


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++++++++.+|.+.+.....+.|++  +++.++++.+.+++..+|+|+.
T Consensus       280 ~~~~~~~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        280 SNELFSLIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHHHHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            4568899999998544445678888  9999999999999999999985

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-33  Score=261.13  Aligned_cols=329  Identities=28%  Similarity=0.369  Sum_probs=259.4

Q ss_pred             ceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~---~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||+.++.   ..+.+++++.+.|.++++|++|++.++++|++|+....|...       .....|.++|+|++|+|+++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~G   73 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP-------PPVKDPLIPLSDGAGEVVAVG   73 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCC-------CCCCCCcccccceeEEEEEeC
Confidence            5777777   336788888888889999999999999999999988763211       112357889999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +++++|++||+|++.+...|+.+      ....|..+.+.+ ....|+|++|+.++.+.++++|+++++.+++.+. .+.
T Consensus        74 ~~~~~~~~Gd~V~~~~~~~~~~~------~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~  146 (336)
T cd08276          74 EGVTRFKVGDRVVPTFFPNWLDG------PPTAEDEASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL  146 (336)
T ss_pred             CCCcCCCCCCEEEEecccccccc------cccccccccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence            99999999999998765444333      223343333333 2347899999999999999999999998888775 778


Q ss_pred             HHHHHHH-hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          171 VGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       171 ~a~~~l~-~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +||+++. ...+++|++++|+|+|++|++++++|+..|+ .+++++.++++.+.++++|++.+++... ..++...+.++
T Consensus       147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~  224 (336)
T cd08276         147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKL  224 (336)
T ss_pred             HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHH
Confidence            8998874 4789999999999989999999999999999 5888888889999999999888776432 14565665544


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG  327 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  327 (366)
                      .  .+.++|+++|+++. .....++++++++|+++.+|..... ........+.++.++.+.... ...+++++++++++
T Consensus       225 ~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  301 (336)
T cd08276         225 T--GGRGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAH  301 (336)
T ss_pred             c--CCCCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcC
Confidence            3  35689999999985 4788999999999999999865432 233444566788888887644 55788899999988


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       328 ~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+.  +...+.+++  ++++++++.+.++...+|+++++
T Consensus       302 ~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         302 RIR--PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             Ccc--cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            873  345577888  99999999999988899999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=5e-34  Score=262.67  Aligned_cols=306  Identities=22%  Similarity=0.269  Sum_probs=240.3

Q ss_pred             cceEEEEeeC-----CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793           14 QNMAAWLLGI-----KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE   88 (366)
Q Consensus        14 ~~~~~~~~~~-----~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   88 (366)
                      .||+.++.++     +++++++.+.|.+.++|++||+.++|+|+.|+....|.+.       ....+|.++|+|++|+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~-------~~~~~p~~~g~e~~G~v~   73 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYD-------PGVKPPFDCGFEGVGEVV   73 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCC-------CCCCCCcccCceeEEEEE
Confidence            3788888854     4688999999999999999999999999999988773211       113578899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchh
Q 017793           89 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP  168 (366)
Q Consensus        89 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~  168 (366)
                      ++|++++.|++||+|++.                             ..|+|++|+.++.+.++++|++. .+.++....
T Consensus        74 ~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~  123 (329)
T cd08250          74 AVGEGVTDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVS  123 (329)
T ss_pred             EECCCCCCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccH
Confidence            999999999999999853                             36899999999999999999973 233334457


Q ss_pred             hHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHH
Q 017793          169 LSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       169 ~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  246 (366)
                      +.+||+++. ..++++++++||+| +|.+|++++|+|+..|+ .++++++++++.+.++++|++.+++..  ..++...+
T Consensus       124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~  200 (329)
T cd08250         124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYK--TEDLGEVL  200 (329)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCC--CccHHHHH
Confidence            889999985 47899999999998 69999999999999999 577777888888999999988776643  24454544


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc---------eee-chHhhhcCcEEEEeecc---
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM---------TVA-LTPAAAREVDVIGIFRY---  313 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---------~~~-~~~~~~~~~~~~~~~~~---  313 (366)
                      ...   .++++|++||++|+ ......+++++++|+++.+|......         ... ....+.++.++.+....   
T Consensus       201 ~~~---~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (329)
T cd08250         201 KKE---YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYA  276 (329)
T ss_pred             HHh---cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHH
Confidence            433   24689999999996 57889999999999999998543210         011 12345566777776432   


Q ss_pred             ---CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          314 ---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       314 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                         .+.++++++++.++.+.+.....+.+++  +++++|++.+.++...||++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         277 KLIPQHLDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence               3457788999999988543334455778  9999999999999888999874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3.1e-33  Score=256.86  Aligned_cols=308  Identities=19%  Similarity=0.255  Sum_probs=234.3

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      |+++++.+++   ++++++.|.|.++++||+||+.++++|++|+....|.+       ......|.++|||++|+|+++ 
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~-------~~~~~~~~~~g~e~~G~v~~~-   72 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNG-------GVTRNYPHTPGIDAAGTVVSS-   72 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCC-------CCCCCCCCccCcccEEEEEEe-
Confidence            6788888775   79999999999999999999999999999998887431       111345788999999999999 


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                       +++.|++||+|++.+.                     +.+ ....|+|++|+.++++.++++|+++++++++.+. .+.
T Consensus        73 -~~~~~~~Gd~V~~~~~---------------------~~g-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~  129 (325)
T cd05280          73 -DDPRFREGDEVLVTGY---------------------DLG-MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF  129 (325)
T ss_pred             -CCCCCCCCCEEEEccc---------------------ccC-CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence             4667999999986421                     001 1246899999999999999999999999998775 677


Q ss_pred             HHHHHHHh---CCCC-CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793          171 VGVHACRR---ANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  245 (366)
Q Consensus       171 ~a~~~l~~---~~~~-~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  245 (366)
                      +|+.++..   ..++ .+++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++++|++.+++...    ....
T Consensus       130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~  204 (325)
T cd05280         130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED----LLDE  204 (325)
T ss_pred             HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh----HHHH
Confidence            78877743   3345 3579999995 9999999999999999 5888889999999999999988766421    1111


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc--C-----CCh
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY--R-----STW  317 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~  317 (366)
                      ....  ..++++|++||++++. .+...+++++++|+++.+|..... .......++.++.++.+....  .     +.+
T Consensus       205 ~~~~--~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (325)
T cd05280         205 SKKP--LLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVW  281 (325)
T ss_pred             HHHH--hcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHH
Confidence            1111  2345799999999974 789999999999999999865422 223333344677777775433  1     123


Q ss_pred             HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       318 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.+.+++..+..   +.+...|++  ++++++++.+.+++..||+|+++
T Consensus       282 ~~~~~~~~~~~~---~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         282 QKLATEWKPDLL---EIVVREISL--EELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHHHHHhcCCc---cceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            344445555533   336678888  99999999999999999999875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=2.1e-33  Score=257.83  Aligned_cols=306  Identities=20%  Similarity=0.274  Sum_probs=232.5

Q ss_pred             eEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           16 MAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        16 ~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      ||+++...   ..++++++|.|.++++||+||+.++++|++|+....|...       .....|.++|+|++|+|++  +
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~V~~--~   71 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG-------VVRSYPMIPGIDAAGTVVS--S   71 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC-------CCCCCCccceeeeEEEEEe--c
Confidence            46666633   4778999999999999999999999999999988774320       1124588899999999998  5


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      ++..|++||+|++.+..                     . +....|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus        72 ~~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t  129 (323)
T TIGR02823        72 EDPRFREGDEVIVTGYG---------------------L-GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFT  129 (323)
T ss_pred             CCCCCCCCCEEEEccCC---------------------C-CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHH
Confidence            67789999999874210                     0 01246899999999999999999999999988776 5667


Q ss_pred             HHHHH---HhCCCCCCC-EEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHH
Q 017793          172 GVHAC---RRANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       172 a~~~l---~~~~~~~~~-~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  246 (366)
                      |+.++   .++.+++++ +|||+|+ |++|++++|+|+.+|+ .++++..++++.++++++|++.+++...  .+  ..+
T Consensus       130 a~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~  204 (323)
T TIGR02823       130 AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED--LS--PPG  204 (323)
T ss_pred             HHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHH
Confidence            77665   345588998 9999995 9999999999999999 5666667777779999999987766422  11  123


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc---C----CChH
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---R----STWP  318 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~----~~~~  318 (366)
                      ..+   ...++|+++||+|+. .+...+++++++|+++.+|..... .......++.++.++.+....   .    ..++
T Consensus       205 ~~~---~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (323)
T TIGR02823       205 KPL---EKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQ  280 (323)
T ss_pred             HHh---cCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHH
Confidence            222   234599999999965 688899999999999999865321 222223444677887775432   1    1255


Q ss_pred             HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++.+++..+.+  .+. .+.|++  +++++|++.+.+++..||+++++
T Consensus       281 ~~~~~~~~~~~--~~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       281 RLATDLKPRNL--ESI-TREITL--EELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             HHHHHhhcCCC--cCc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence            56667777777  333 467888  99999999999999999999874

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.8e-33  Score=258.25  Aligned_cols=296  Identities=26%  Similarity=0.347  Sum_probs=237.4

Q ss_pred             ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 017793           25 TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA  104 (366)
Q Consensus        25 ~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~  104 (366)
                      .+.+++.|.|.+++++|+||+.++++|+.|+.+..|...       .....|.++|+|++|+|+++|++++.+++||+|+
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~-------~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~   85 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYG-------SRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVL   85 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCC-------CCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEE
Confidence            577888899999999999999999999999988763321       1124578999999999999999999999999998


Q ss_pred             EcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHH-hCCCC
Q 017793          105 LEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANVG  182 (366)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~~  182 (366)
                      +.+                            ..|+|++|+.++.+.++++|+++++++++.+. ...+||+++. ...++
T Consensus        86 ~~~----------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~  137 (323)
T cd05282          86 PLG----------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP  137 (323)
T ss_pred             EeC----------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence            631                            15899999999999999999999998888764 6778888874 46789


Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ++++|||+| +|.+|++++|+|+.+|+ .++++.+++++.+.++++|++.++++..  .++...+.+..  .+.++|++|
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vl  212 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEAT--GGAGARLAL  212 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHh--cCCCceEEE
Confidence            999999998 58999999999999999 5777778888889999999988777532  34555554443  357899999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-----------CCChHHHHHHHHCCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-----------RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~g~~  329 (366)
                      ||+|+. .....+++++++|+++.+|..... ..++...+..++.++.+....           .+.++++++++.++.+
T Consensus       213 ~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  291 (323)
T cd05282         213 DAVGGE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVL  291 (323)
T ss_pred             ECCCCH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCc
Confidence            999986 567889999999999999865432 223333344477777776533           1357789999999998


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      .  +...+.|++  ++++++++.+.++...||++++
T Consensus       292 ~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         292 T--TPVGAKFPL--EDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             c--cCccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence            4  445678888  9999999999999888999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=2.9e-33  Score=257.26  Aligned_cols=310  Identities=17%  Similarity=0.222  Sum_probs=232.6

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||+.++++++   .+.+++.|.|.|+++||+||+.++++|++|+....+.       +.....+|.++|||++|+|+++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~-------~~~~~~~~~~~g~e~~G~V~~~~   73 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPG-------GKIVKRYPFIPGIDLAGTVVESN   73 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCC-------ccccCCCCcCcccceeEEEEEcC
Confidence            5777887553   4788999999999999999999999999998655411       11123458899999999999954


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                        ++.|++||+|++.+..                     + +....|+|+||++++++.++++|+++++++++.+. .+.
T Consensus        74 --~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~  129 (326)
T cd08289          74 --DPRFKPGDEVIVTSYD---------------------L-GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF  129 (326)
T ss_pred             --CCCCCCCCEEEEcccc---------------------c-CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence              5779999999875321                     0 11247999999999999999999999999998775 566


Q ss_pred             HHHHHHH---hCCCC-CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793          171 VGVHACR---RANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  245 (366)
Q Consensus       171 ~a~~~l~---~~~~~-~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  245 (366)
                      +|+.++.   +..+. .+++|||+|+ |++|++++|+|+..|+ .++++++++++.++++++|++.+++...  . ....
T Consensus       130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~~~~  205 (326)
T cd08289         130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE--L-QEES  205 (326)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh--H-HHHH
Confidence            7777763   23334 4789999995 9999999999999999 6888888999999999999988776432  1 2233


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc---CCChHHHH
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---RSTWPLCI  321 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  321 (366)
                      +..+   .++++|++||++|+ .....++++++++|+++.+|..... .+.....++.++.++.+....   .....+++
T Consensus       206 ~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (326)
T cd08289         206 IKPL---EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIW  281 (326)
T ss_pred             HHhh---ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHH
Confidence            3332   35679999999997 4788999999999999999865332 222344455778888886432   12233444


Q ss_pred             HHHHCCCCC---CCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          322 EFLRSGKID---VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       322 ~~l~~g~~~---~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.+.+ .+.   ..+.+.+.|++  +++.+|++.+.+++..||+++++
T Consensus       282 ~~~~~-~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         282 RRLAT-DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             HHHHh-hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence            44433 221   12345788888  99999999999999999999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.6e-33  Score=255.66  Aligned_cols=305  Identities=25%  Similarity=0.346  Sum_probs=237.0

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      |+++++..+   ..+.+.+.+.|.++++||+||++++++|+.|+....|..        .....|.++|+|++|+|+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~--------~~~~~~~~~g~e~~G~v~~vG   72 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHS--------PSVKFPRVLGIEAVGEVEEAP   72 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC--------CCCCCCccccceeEEEEEEec
Confidence            456666544   357777888888899999999999999999998777321        123457889999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +  ..+++||+|++.....                      +....|+|++|+.++.+.++++|+++++++++.+. ++.
T Consensus        73 ~--~~~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  128 (320)
T cd08243          73 G--GTFTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYY  128 (320)
T ss_pred             C--CCCCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHH
Confidence            5  5799999998742110                      01246999999999999999999999998887665 888


Q ss_pred             HHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +||+++.. .++++|++|||+| +|++|++++|+|+..|+ .++++..++++.+.++++|++.+++.   ..++...+.+
T Consensus       129 ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~  204 (320)
T cd08243         129 TAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID---DGAIAEQLRA  204 (320)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHH
Confidence            99999854 6789999999998 59999999999999999 58888888999999999999877542   2355555544


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCcee---echHh--hhcCcEEEEeecc---CCChHHH
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV---ALTPA--AAREVDVIGIFRY---RSTWPLC  320 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~--~~~~~~~~~~~~~---~~~~~~~  320 (366)
                      +    ++++|+++|++|+ ..+...+++++++|+++.+|........   .....  ..++..+.+....   ...++++
T Consensus       205 ~----~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (320)
T cd08243         205 A----PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQEL  279 (320)
T ss_pred             h----CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHH
Confidence            4    5689999999997 4788999999999999999864322111   11111  1445566555432   2357889


Q ss_pred             HHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          321 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       321 ~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +++++++.+.  +...+.|++  +++++|++.+.++...||+++
T Consensus       280 ~~~~~~~~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         280 FDFVAAGHLD--IPPSKVFTF--DEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHCCcee--cccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence            9999999884  345677888  999999999999988899886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=1.3e-32  Score=254.07  Aligned_cols=306  Identities=20%  Similarity=0.279  Sum_probs=238.0

Q ss_pred             ceEEEEeeCCc------eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEEE
Q 017793           15 NMAAWLLGIKT------LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGII   87 (366)
Q Consensus        15 ~~~~~~~~~~~------~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~V   87 (366)
                      |++.+++++..      ++++++|.|++.+++|+||+.++++|+.|+....+         ..+ ...|.++|+|++|+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~---------~~~~~~~~~~~g~e~~G~v   71 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAG---------GAPVPGQPKILGWDASGVV   71 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcC---------CCCCCCCCcccccceEEEE
Confidence            46777776632      66678888889999999999999999999987763         211 235678999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE  167 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~  167 (366)
                      +++|++++.|++||+|+....                         ....|+|++|+.++.+.++++|+++++++++.+.
T Consensus        72 ~~~G~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~  126 (336)
T cd08252          72 EAVGSEVTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALP  126 (336)
T ss_pred             EEcCCCCCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhh
Confidence            999999999999999985310                         1136899999999999999999999998888765


Q ss_pred             -hhHHHHHHH-HhCCCCC-----CCEEEEEC-CCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793          168 -PLSVGVHAC-RRANVGP-----ETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTD  238 (366)
Q Consensus       168 -~~~~a~~~l-~~~~~~~-----~~~vlI~G-~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  238 (366)
                       .+.+||+++ +...+.+     +++|+|+| +|++|++++|+|+.+| + .++++++++++.++++++|++.+++..  
T Consensus       127 ~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--  203 (336)
T cd08252         127 LTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH--  203 (336)
T ss_pred             hHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC--
Confidence             667788886 4567776     99999998 6999999999999999 7 788888888999999999998877643  


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-----
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-----  313 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----  313 (366)
                       .++...+...   .++++|++||++|+......++++++++|+++.+|...  ...+...+..++.++.+....     
T Consensus       204 -~~~~~~i~~~---~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (336)
T cd08252         204 -QDLAEQLEAL---GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMF  277 (336)
T ss_pred             -ccHHHHHHhh---CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccc
Confidence             2455555422   34689999999997668899999999999999998543  222333333456665553321     


Q ss_pred             --------CCChHHHHHHHHCCCCCCCCc-eEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          314 --------RSTWPLCIEFLRSGKIDVKPL-ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       314 --------~~~~~~~~~~l~~g~~~~~~~-~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                              ...++++++++.++.+.+... ....+++  ++++++++.+.++...||++++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         278 QTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             cccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence                    123678999999999843211 1234567  9999999999999999999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=5.9e-32  Score=247.81  Aligned_cols=312  Identities=29%  Similarity=0.402  Sum_probs=244.4

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      |+++++..+   ..+.++++|.|.+.+++|+|++.++++|++|+....|...       .....|+++|+|++|+|+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~g   73 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYP-------GLPPLPYVPGSDGAGVVEAVG   73 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCC-------CCCCCCeecccceEEEEEeeC
Confidence            456666543   3588889999999999999999999999999987763211       123568899999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +++++|++||+|++.+...                       ....|++++|+.++.+.++++|+++++++++.+. ++.
T Consensus        74 ~~~~~~~~Gd~v~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  130 (325)
T cd08253          74 EGVDGLKVGDRVWLTNLGW-----------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL  130 (325)
T ss_pred             CCCCCCCCCCEEEEecccc-----------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence            9999999999999753110                       0136899999999999999999999999888775 788


Q ss_pred             HHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +|++++.. .+++++++++|+| +|++|++++++++..|+ .++++++++++.+.++++|++.+++..  ..++...+.+
T Consensus       131 ~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~  207 (325)
T cd08253         131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILA  207 (325)
T ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHH
Confidence            89988854 8899999999998 59999999999999998 688888888999999999988776643  3455555544


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-------CCChHHHH
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------RSTWPLCI  321 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  321 (366)
                      +.  .++++|++++++++. .....+++++.+|+++.++............++.++.++.+...+       .+.++++.
T Consensus       208 ~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (325)
T cd08253         208 AT--AGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIA  284 (325)
T ss_pred             Hc--CCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHH
Confidence            43  246899999999975 678888999999999999864422233333345566666655433       22455667


Q ss_pred             HHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          322 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       322 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++.++.+  .+...+.|++  ++++++++.+.++...||+++++
T Consensus       285 ~~~~~~~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         285 AGLADGAL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHHCCCc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            78888887  4445677888  99999999999998999999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=5.2e-32  Score=251.38  Aligned_cols=312  Identities=25%  Similarity=0.347  Sum_probs=231.7

Q ss_pred             ceEEEEeeCC----ceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhccccc---cccc----CccCCCCcccccc
Q 017793           15 NMAAWLLGIK----TLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLST---MRCA----NFIVKKPMVIGHE   82 (366)
Q Consensus        15 ~~~~~~~~~~----~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~---~~~~----~~~~~~p~i~G~e   82 (366)
                      ||++++.++.    .+++++.|.|+| +++||+||+.++++|++|+.+..|.....   ++..    +.....|.++|+|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            5666666543    288899999999 59999999999999999998887531100   0000    0124568899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc
Q 017793           83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE  162 (366)
Q Consensus        83 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~  162 (366)
                      ++|+|+++|+++++|++||+|++.+..                         ...|+|++|+.++.+.++++|+++++++
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~  135 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEE  135 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHH
Confidence            999999999999999999999864211                         1369999999999999999999999988


Q ss_pred             cccch-hhHHHHHHHHh-CCCC----CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec
Q 017793          163 GAMCE-PLSVGVHACRR-ANVG----PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  235 (366)
Q Consensus       163 aa~~~-~~~~a~~~l~~-~~~~----~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  235 (366)
                      ++.+. .+.+||+++.. ..++    +|++++|+| +|++|++++++|+.+|+ .++++.++ ++.+.++++|.+.+++.
T Consensus       136 aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~  213 (350)
T cd08248         136 AASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDY  213 (350)
T ss_pred             HhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEEC
Confidence            88775 78889988844 5554    499999998 69999999999999999 56666544 67788899998777664


Q ss_pred             CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce----e----echHhhhc----
Q 017793          236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT----V----ALTPAAAR----  303 (366)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~----~----~~~~~~~~----  303 (366)
                      ..  .++...+   ..  .+++|++||++|+. ....++++++++|+++.+|.......    .    ....+...    
T Consensus       214 ~~--~~~~~~l---~~--~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (350)
T cd08248         214 NN--EDFEEEL---TE--RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV  285 (350)
T ss_pred             CC--hhHHHHH---Hh--cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence            32  3343333   22  36799999999976 78899999999999999875431110    1    00011111    


Q ss_pred             -----CcEE-EEee-ccCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          304 -----EVDV-IGIF-RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       304 -----~~~~-~~~~-~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                           ...+ .+.. .....++++++++.++.+  .+.+++.|++  ++++++++.+.++...+|++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence                 1111 1111 124568899999999988  4446678888  9999999999998888898874

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=9.3e-32  Score=247.03  Aligned_cols=307  Identities=21%  Similarity=0.254  Sum_probs=234.3

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.+++   .+++++.|.|+|+++||+||+.++++|++|+....|..       .....+|.++|+|++|+|++  
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~-------~~~~~~~~~~g~e~~G~V~~--   71 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKG-------GIVRTFPLVPGIDLAGTVVE--   71 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCc-------cccCCCCCccccceEEEEEe--
Confidence            5778887664   68899999999999999999999999999998776321       01123578899999999998  


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++++++++||+|++....                     . .....|+|++|+.++.+.++++|+++++++++.+. .+.
T Consensus        72 ~~~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~  129 (324)
T cd08288          72 SSSPRFKPGDRVVLTGWG---------------------V-GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF  129 (324)
T ss_pred             CCCCCCCCCCEEEECCcc---------------------C-CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence            777889999999864110                     0 01136899999999999999999999999888775 566


Q ss_pred             HHHHHHH---hCCCC-CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793          171 VGVHACR---RANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  245 (366)
Q Consensus       171 ~a~~~l~---~~~~~-~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  245 (366)
                      +++.++.   ..... +++++||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.++++..    ....
T Consensus       130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~  204 (324)
T cd08288         130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEP  204 (324)
T ss_pred             HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHh
Confidence            6665543   44555 5789999995 9999999999999999 5777778889999999999988877532    2223


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-------CCCh
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------RSTW  317 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~  317 (366)
                      +..+   ...++|.++|++++. .....+..++.+|+++.+|.... ........++.++.++.+....       .+.+
T Consensus       205 ~~~~---~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (324)
T cd08288         205 GRPL---QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAW  280 (324)
T ss_pred             hhhh---ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHH
Confidence            3322   244689999999964 56778888999999999886422 1122333344677887776422       2246


Q ss_pred             HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       318 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.+.+++.++.+  .+ +.+.+++  ++++++++.+.+++..||+++++
T Consensus       281 ~~~~~~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         281 ARLARDLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHHHHHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence            667778888877  33 3578888  99999999999999999999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=6e-32  Score=251.14  Aligned_cols=315  Identities=20%  Similarity=0.266  Sum_probs=229.1

Q ss_pred             eEEEEeeC-CceEEEEecCCCC---CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           16 MAAWLLGI-KTLKIQPYHLPTL---GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        16 ~~~~~~~~-~~~~~~~~~~p~~---~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      +++++.++ ++++++.++.|.|   ++++|+||+.++++|++|+....+..       ......|.++|+|++|+|+++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~V~~vG   74 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYT-------FHFKVKEKGLGRDYSGVIVKVG   74 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccc-------cccccCCCccCceeEEEEEEeC
Confidence            46666655 4666766666554   99999999999999999997765211       0011237789999999999999


Q ss_pred             CCCC-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC----ceEECCCCCCccccccc
Q 017793           92 SEVK-SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        92 ~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~----~~~~~P~~~~~~~aa~~  166 (366)
                      ++++ +|++||+|++....++                       ...|+|++|++++.+    .++++|+++++++++.+
T Consensus        75 ~~v~~~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~  131 (352)
T cd08247          75 SNVASEWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAW  131 (352)
T ss_pred             cccccCCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHh
Confidence            9998 8999999987532211                       136899999999988    78999999999999877


Q ss_pred             h-hhHHHHHHHHh-C-CCCCCCEEEEECC-CHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceeeecCCCCc-
Q 017793          167 E-PLSVGVHACRR-A-NVGPETNVMIMGS-GPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIE-  240 (366)
Q Consensus       167 ~-~~~~a~~~l~~-~-~~~~~~~vlI~G~-g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~-  240 (366)
                      + .+.+||+++.. . ++++|+++||+|+ |++|++++|+|+..| ...++++. ++++.+.++++|++.++++..... 
T Consensus       132 ~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~  210 (352)
T cd08247         132 PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGV  210 (352)
T ss_pred             HHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCccc
Confidence            5 67789998865 4 6999999999985 799999999999875 43566665 455566788999988777543210 


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhc---CCceEEEEc-ccCCC-ce----------e----echHhh
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR---PGGKVCLIG-LAKTE-MT----------V----ALTPAA  301 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~-~~----------~----~~~~~~  301 (366)
                      .+...+.+.. ..++++|++|||+|+......++++++   ++|+++.++ ..... ..          .    ......
T Consensus       211 ~~~~~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (352)
T cd08247         211 KLLKPVLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLG  289 (352)
T ss_pred             chHHHHHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhc
Confidence            0322222221 125689999999998667888999999   999999764 22111 00          0    011122


Q ss_pred             hcCcEEEEeecc--CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          302 AREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       302 ~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +...++......  .+.++++++++.++.+  .+.+.+.+++  ++++++++.+++++..||+++++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         290 LWSYNYQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             CCCcceEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence            333333332211  2457889999999988  4446678888  99999999999998899999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=2.1e-31  Score=243.78  Aligned_cols=305  Identities=27%  Similarity=0.371  Sum_probs=241.5

Q ss_pred             ceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~---~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.+   +..+++++.+.|.+.+++++||+.++++|+.|+....|.+       ......|.++|+|++|+|+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~v~~vg   73 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-------PPPPGASDILGLEVAGVVVAVG   73 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCC-------CCCCCCCCcccceeEEEEEeeC
Confidence            57788775   3567888888888899999999999999999998776321       1123457899999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++++.+++||+|+..                            ...|+|++|+.++.+.++++|+++++.+++.+. .+.
T Consensus        74 ~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~  125 (323)
T cd05276          74 PGVTGWKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF  125 (323)
T ss_pred             CCCCCCCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence            999999999999853                            135899999999999999999999998887664 788


Q ss_pred             HHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      ++++++. ...++++++++|+| +|++|++++++++..|+ .++++.+++++.+.++++|++.+++..  ..++...+..
T Consensus       126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~  202 (323)
T cd05276         126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYR--TEDFAEEVKE  202 (323)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--chhHHHHHHH
Confidence            8998874 47789999999999 58999999999999999 578888888888888999987766543  2345555544


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeeccC-----------CC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRYR-----------ST  316 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~  316 (366)
                      ..  .+.++|+++|+.|+. .....++++.++|+++.+|..... .......++.++.++.++....           ..
T Consensus       203 ~~--~~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (323)
T cd05276         203 AT--GGRGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAF  279 (323)
T ss_pred             Hh--CCCCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHH
Confidence            43  256899999999976 577889999999999998754321 2233333445777777765431           23


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      ++++++++.++++  .+..++.|++  ++++++++.+.++...||+++
T Consensus       280 ~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         280 REHVWPLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence            5678889999988  4446678888  999999999998888889874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=1.3e-31  Score=246.48  Aligned_cols=292  Identities=20%  Similarity=0.195  Sum_probs=227.5

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV  103 (366)
Q Consensus        24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V  103 (366)
                      +.++++++|.|++++++|+||+.++++|+.|.....+...     -..+...+.++|+|++|+|+++|++  .|++||+|
T Consensus        18 ~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V   90 (329)
T cd05288          18 DDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKS-----YSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLV   90 (329)
T ss_pred             cceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcc-----cCCCccCCCcccCceEEEEEecCCC--CCCCCCEE
Confidence            5689999999999999999999999999988755442110     0011223567899999999999964  79999999


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecC-CceEECCCCCC--cccc-c-cchhhHHHHHHHH-
Q 017793          104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLPDNVS--LEEG-A-MCEPLSVGVHACR-  177 (366)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~-~~~~~~P~~~~--~~~a-a-~~~~~~~a~~~l~-  177 (366)
                      +.                               .++|++|+.++. +.++++|++++  +.++ + ....+.+||+++. 
T Consensus        91 ~~-------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~  139 (329)
T cd05288          91 SG-------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTE  139 (329)
T ss_pred             ec-------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHh
Confidence            84                               358999999999 99999999985  3343 3 3347889999884 


Q ss_pred             hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          178 RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       178 ~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ...++++++|||+| +|++|++++|+|+..|+ .++++++++++.+.+++ +|++.++++..  .++...+.++.   ++
T Consensus       140 ~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~---~~  213 (329)
T cd05288         140 IGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA---PD  213 (329)
T ss_pred             ccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc---cC
Confidence            47789999999998 69999999999999999 68888888999999988 99988877543  34555554443   46


Q ss_pred             CCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce------eechHhhhcCcEEEEeecc------CCChHHHHHH
Q 017793          256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT------VALTPAAAREVDVIGIFRY------RSTWPLCIEF  323 (366)
Q Consensus       256 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  323 (366)
                      ++|++|||+|+ ..+..++++++++|+++.+|.......      .+....+.++.++.+....      .+.+.+++++
T Consensus       214 ~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (329)
T cd05288         214 GIDVYFDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKW  292 (329)
T ss_pred             CceEEEEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHH
Confidence            89999999996 478899999999999999985543211      1233455677777776543      2357788999


Q ss_pred             HHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          324 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       324 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +.++.+.+.+  ...+++  +++.++++.+.++...||+++
T Consensus       293 ~~~g~i~~~~--~~~~~l--~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         293 LAEGKLKYRE--DVVEGL--ENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHCCCccccc--cccccH--HHHHHHHHHHhcCCCccceeC
Confidence            9999985443  345778  999999999999888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.6e-31  Score=243.84  Aligned_cols=307  Identities=28%  Similarity=0.355  Sum_probs=239.0

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++..++   .+++++.+.|.+.+++|+|++.++++|++|+.+..+..       ......|.++|+|++|+|+++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~v~~~G   73 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGA-------AARPPLPAILGCDVAGVVEAVG   73 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCC-------CCCCCCCcccccceeEEEEEeC
Confidence            5788887553   48888888888899999999999999999998876321       0113347789999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +++++|++||+|+.....                       .....|+|++|+.++.+.++++|+++++.+++.++ .+.
T Consensus        74 ~~~~~~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~  130 (326)
T cd08272          74 EGVTRFRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI  130 (326)
T ss_pred             CCCCCCCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence            999999999999864210                       01136899999999999999999999998888775 677


Q ss_pred             HHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +|++++ +..+++++++++|+| +|++|++++++++..|+ .++++.++ ++.++++++|++.+++..  .. +...+..
T Consensus       131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~~~~  205 (326)
T cd08272         131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYR--ET-VVEYVAE  205 (326)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecc--hh-HHHHHHH
Confidence            888887 568899999999998 69999999999999999 56777677 888888999987776642  23 5555544


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc------------CCC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY------------RST  316 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~  316 (366)
                      +.  .+.++|+++|++++. .....+++++++|+++.++...   .........++..+.+....            .+.
T Consensus       206 ~~--~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (326)
T cd08272         206 HT--GGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEI  279 (326)
T ss_pred             hc--CCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEEEEEcccccccccchhhHHHH
Confidence            42  356799999999975 6788999999999999987553   11222223455555554421            235


Q ss_pred             hHHHHHHHHCCCCCCCCceE-EEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          317 WPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.++++++.++.+  .+.+. +.|++  ++++++++.+.++...+|+++++
T Consensus       280 ~~~~~~~l~~~~l--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         280 LREAARLVERGQL--RPLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHHHHHCCCc--ccccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence            7778889999988  34433 77888  99999999999988899999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.2e-31  Score=244.44  Aligned_cols=308  Identities=24%  Similarity=0.318  Sum_probs=237.2

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.+|.   .+.+++.|.|.+.+++|+||+.++++|+.|+....+..        .....|.++|+|++|+|+.+|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~--------~~~~~~~~~g~e~~G~v~~~G   72 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGP--------PAWSYPHVPGVDGAGVVVAVG   72 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC--------CCCCCCcccccceEEEEEEeC
Confidence            6788888887   89999999999999999999999999999998766221        111237789999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++++++++||+|++.+.                         ....|+|++|+.++.+.++++|+++++.+++.+. .+.
T Consensus        73 ~~~~~~~~Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~  127 (325)
T cd08271          73 AKVTGWKVGDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGL  127 (325)
T ss_pred             CCCCcCCCCCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHH
Confidence            99999999999986421                         1136899999999999999999999998888664 788


Q ss_pred             HHHHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +|++++. .+++++|++++|+|+ |++|++++++++..|+ .++.+. ++++.+++.++|++.+++.  ...++...+..
T Consensus       128 ~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~  203 (325)
T cd08271         128 TAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKE  203 (325)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHH
Confidence            8998884 478899999999995 8999999999999999 466654 6677788888998776653  33455555554


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce--eechHhhhcCcEEEEeecc---------CCCh
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT--VALTPAAAREVDVIGIFRY---------RSTW  317 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~  317 (366)
                      ..  .+.++|++++++++. .....+++++++|+++.++.......  .......++.+++......         .+.+
T Consensus       204 ~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (325)
T cd08271         204 IT--GGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAG  280 (325)
T ss_pred             Hc--CCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHH
Confidence            43  256799999999976 55678999999999998864432111  0111223333333333221         1235


Q ss_pred             HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       318 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+++++++++.+.  +...+.|++  +++.++++.+.++...+|+++++
T Consensus       281 ~~~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         281 EELLELLAAGKLE--PLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHHHCCCee--eccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence            6788999999884  445577888  99999999999988899999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4.1e-31  Score=241.61  Aligned_cols=295  Identities=28%  Similarity=0.354  Sum_probs=233.4

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV  103 (366)
Q Consensus        24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V  103 (366)
                      ..+.+.+.+.|.+.+++++|+|.++++|++|+.+..+         .....+|.++|+|++|+|+.+|+++++|++||+|
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~---------~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V   82 (320)
T cd05286          12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSG---------LYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRV   82 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcC---------CCCCCCCccCCcceeEEEEEECCCCCCCCCCCEE
Confidence            3567777777778999999999999999999988762         2223457789999999999999999999999999


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHH-hCCC
Q 017793          104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANV  181 (366)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~  181 (366)
                      ++..                            ..|+|++|+.++.+.++++|++++.++++.+. ...++++++. ..++
T Consensus        83 ~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~  134 (320)
T cd05286          83 AYAG----------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV  134 (320)
T ss_pred             EEec----------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC
Confidence            8631                            26899999999999999999999998887664 6778888874 5889


Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +++++|||+| +|++|++++++++.+|+ .+++++.++++.+.++++|++.+++.  ...++...+..+.  .+.++|++
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~d~v  209 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINY--RDEDFVERVREIT--GGRGVDVV  209 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeC--CchhHHHHHHHHc--CCCCeeEE
Confidence            9999999999 69999999999999999 67888888899999999999877653  2245555554432  35689999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc---------CCChHHHHHHHHCCCCC
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKID  330 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~g~~~  330 (366)
                      ++|+++. ....++++++++|+++.+|..... ..+....+..+++++.+....         .+.++++++++.++.+.
T Consensus       210 l~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (320)
T cd05286         210 YDGVGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLK  288 (320)
T ss_pred             EECCCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCc
Confidence            9999974 788999999999999999864432 122222333556666543211         23456788899999884


Q ss_pred             CCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +  ...+.|++  ++++++++.+.++...+|++++
T Consensus       289 ~--~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         289 V--EIGKRYPL--ADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             C--cccceEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence            3  35577888  9999999999999888999875

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.8e-31  Score=244.59  Aligned_cols=299  Identities=25%  Similarity=0.312  Sum_probs=230.4

Q ss_pred             eEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           16 MAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        16 ~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      |++++...   ..+++++.|.|.|.+++|+|++.++++|++|+.+..|...       ....+|+++|+|++|+|+.+|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~vG~   74 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYP-------DQPPLPFTPGYDLVGRVDALGS   74 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-------CCCCCCcccccceEEEEEEeCC
Confidence            56666633   5688999999999999999999999999999988773211       1124688999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      ++++|++||+|++.+                            ..|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus        75 ~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t  126 (331)
T cd08273          75 GVTGFEVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT  126 (331)
T ss_pred             CCccCCCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence            999999999998631                            24899999999999999999999998887665 7888


Q ss_pred             HHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          172 GVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       172 a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ||+++.. .+++++++++|+| +|++|++++++|+..|+ .++++.. +++.++++++|+.. ++.  ...++...  ..
T Consensus       127 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~--~~~~~~~~--~~  199 (331)
T cd08273         127 AYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY--RTKDWLPA--ML  199 (331)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC--CCcchhhh--hc
Confidence            9998854 7899999999998 59999999999999999 6777766 88889999999754 232  22333322  12


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech--------------Hhh--hcCcEEEEeecc
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT--------------PAA--AREVDVIGIFRY  313 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--------------~~~--~~~~~~~~~~~~  313 (366)
                         .++++|+++||+++. ....++++++++|+++.+|...........              ...  ....+.......
T Consensus       200 ---~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (331)
T cd08273         200 ---TPGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRD  275 (331)
T ss_pred             ---cCCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechh
Confidence               246899999999977 488899999999999999865432211100              011  112222222211


Q ss_pred             --------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          314 --------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       314 --------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                              .+.+++++++++++.+  .+.+.+.+++  ++++++++.+.++...||+|+
T Consensus       276 ~~~~p~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         276 RAEDPKLFRQDLTELLDLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             cccCHHHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence                    3467789999999998  4456678888  999999999999988899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.2e-31  Score=236.08  Aligned_cols=266  Identities=37%  Similarity=0.649  Sum_probs=216.3

Q ss_pred             cEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccC
Q 017793           40 DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKA  119 (366)
Q Consensus        40 evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~  119 (366)
                      ||+|+|.++++|+.|+....|...       ....+|.++|+|++|+|+++|++++.|++||+|+..+..+|+.|.+|..
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~   73 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP-------PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE   73 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC-------cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh
Confidence            689999999999999998874321       1234578999999999999999999999999999999999999999996


Q ss_pred             CCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc-hhhHHHHHHHHh-CCCCCCCEEEEECCCHHHH
Q 017793          120 GSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGL  197 (366)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~  197 (366)
                          .|+...+.+ ....|+|++|+.++.+.++++|+++++++++.+ .++.+|++++.. ..++++++|||+|+|++|+
T Consensus        74 ----~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~  148 (271)
T cd05188          74 ----LCPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL  148 (271)
T ss_pred             ----hCCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence                676665444 345899999999999999999999999999888 489999999865 5558999999999766999


Q ss_pred             HHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhh
Q 017793          198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT  277 (366)
Q Consensus       198 ~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l  277 (366)
                      +++++++..|. .++++++++++.++++++|++.++++.  ..++...+.   ...+.++|++++++++......+++++
T Consensus       149 ~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l  222 (271)
T cd05188         149 LAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLL  222 (271)
T ss_pred             HHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhc
Confidence            99999999997 788888999999999999988776543  234444443   223678999999999856888999999


Q ss_pred             cCCceEEEEcccCCCceee-chHhhhcCcEEEEeecc-CCChHHHHHH
Q 017793          278 RPGGKVCLIGLAKTEMTVA-LTPAAAREVDVIGIFRY-RSTWPLCIEF  323 (366)
Q Consensus       278 ~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~  323 (366)
                      +++|+++.++......... ....+.++.++.++..+ ..++++++++
T Consensus       223 ~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (271)
T cd05188         223 RPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL  270 (271)
T ss_pred             ccCCEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence            9999999998665433222 33467788888888765 4466666655

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=8.3e-31  Score=238.03  Aligned_cols=288  Identities=23%  Similarity=0.385  Sum_probs=226.7

Q ss_pred             CCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCC
Q 017793           33 LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCG  112 (366)
Q Consensus        33 ~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~  112 (366)
                      .|.+.+++++||+.++++|+.|+....+.+.       ....+|.++|+|++|+|+++|+++++|++||+|++...    
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-------~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP-------TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCC-------CCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC----
Confidence            5678999999999999999999988774321       12345889999999999999999999999999986421    


Q ss_pred             CCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEEC
Q 017793          113 HCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG  191 (366)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G  191 (366)
                                            ...|+|++|+.++.+.++++|+++++++++.+. .+.+||++++..+++++++++|+|
T Consensus        71 ----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~  128 (303)
T cd08251          71 ----------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQT  128 (303)
T ss_pred             ----------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence                                  136899999999999999999999999888775 788899998888899999999996


Q ss_pred             -CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHH
Q 017793          192 -SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM  270 (366)
Q Consensus       192 -~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~  270 (366)
                       +|.+|++++|+++.+|+ .++++++++++.+.++++|++.+++...  .++...+..+.  .+.++|+++|++++ ...
T Consensus       129 ~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~~~~d~v~~~~~~-~~~  202 (303)
T cd08251         129 ATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLT--GGRGVDVVINTLSG-EAI  202 (303)
T ss_pred             CCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHc--CCCCceEEEECCcH-HHH
Confidence             79999999999999999 6888888888999999999988776432  45666655443  35689999999975 578


Q ss_pred             HHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEE-----Eeecc-----CCChHHHHHHHHCCCCCCCCceEEE
Q 017793          271 STALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVI-----GIFRY-----RSTWPLCIEFLRSGKIDVKPLITHR  338 (366)
Q Consensus       271 ~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~  338 (366)
                      ...+++++++|+++.++.....  ....... +.++..+.     .....     .+.+.+++++++++.+  .+..++.
T Consensus       203 ~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~  279 (303)
T cd08251         203 QKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL--RPTVSRI  279 (303)
T ss_pred             HHHHHHhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc--cCCCceE
Confidence            8899999999999998754321  1111111 11222211     11111     2357778899999988  4445677


Q ss_pred             ecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          339 FGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       339 ~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      |++  ++++++++.+.+++..||+++
T Consensus       280 ~~~--~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         280 FPF--DDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             EcH--HHHHHHHHHHHhCCCcceEeC
Confidence            888  999999999999988999874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.6e-30  Score=233.55  Aligned_cols=311  Identities=27%  Similarity=0.389  Sum_probs=239.6

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++...   ..+.+++.+.|.+++++++|++.++++|+.|+....+...       ....+|.++|+|++|+|+.+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~-------~~~~~~~~~g~e~~G~v~~~G   73 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI-------EPPPLPARLGYEAAGVVEAVG   73 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccC-------CCCCCCCCCCcceEEEEEeeC
Confidence            466666643   4677888888888999999999999999999987663211       113447889999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +++++|++||+|+..+...                       ....|++++|+.++.+.++++|+++++++++.+. .+.
T Consensus        74 ~~~~~~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  130 (328)
T cd08268          74 AGVTGFAVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYL  130 (328)
T ss_pred             CCCCcCCCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHH
Confidence            9999999999998753210                       1236899999999999999999999988877664 788


Q ss_pred             HHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +++.++. ...++++++++|+| +|++|++++++++..|+ .++.++.++++.+.++++|.+.+++..  ..++...+.+
T Consensus       131 ~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~  207 (328)
T cd08268         131 TAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTD--EEDLVAEVLR  207 (328)
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecC--CccHHHHHHH
Confidence            8998885 57888999999998 59999999999999999 677777888888888889987776643  2455555544


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc---------CCChH
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWP  318 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~  318 (366)
                      ..  .+.++|+++++.++ .....++++++++|+++.+|..... ...+....+.++..+.+....         ...++
T Consensus       208 ~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (328)
T cd08268         208 IT--GGKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIA  284 (328)
T ss_pred             Hh--CCCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHH
Confidence            43  24579999999997 4778889999999999998854431 222333345666666665422         12355


Q ss_pred             HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      .+.+++.++.+.  +.....|++  +++.++++.+.++...+|++++
T Consensus       285 ~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         285 FILDGLASGALK--PVVDRVFPF--DDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHHHHHCCCCc--CCcccEEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence            566677788874  345577888  9999999999998888999986

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=7.2e-30  Score=234.08  Aligned_cols=307  Identities=25%  Similarity=0.329  Sum_probs=239.6

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      |+++.+..+   ..+.+++.+.|.+++++++|++.++++|+.|+....+.+       ..+..+|.++|+|++|+|+.+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~v~~vg   73 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-------PPPPGASDILGLEVAGEVVAVG   73 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC-------CCCCCCCCCccceeEEEEEEeC
Confidence            455655543   457777777777899999999999999999998766321       1112357889999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++++++++||+|+..                            ..+|+|++|+.++.+.++++|+++++.+++.+. .+.
T Consensus        74 ~~~~~~~~Gd~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~  125 (325)
T TIGR02824        74 EGVSRWKVGDRVCAL----------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFF  125 (325)
T ss_pred             CCCCCCCCCCEEEEc----------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHH
Confidence            999999999999853                            135899999999999999999999988887664 788


Q ss_pred             HHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      ++++++ +...++++++++|+| +|++|++++++++..|+ .++++.+++++.+.++++|++.+++.  ...++...+..
T Consensus       126 ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~  202 (325)
T TIGR02824       126 TVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINY--REEDFVEVVKA  202 (325)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHHHHH
Confidence            888886 558899999999998 59999999999999999 67777788888888889998766553  22445555544


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeeccC-----------CC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRYR-----------ST  316 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~  316 (366)
                      ..  .+.++|++++++|+. .....+++++++|+++.+|.... ........+..++.++.+.....           ..
T Consensus       203 ~~--~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (325)
T TIGR02824       203 ET--GGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAEL  279 (325)
T ss_pred             Hc--CCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHH
Confidence            43  245799999999965 78889999999999999986432 12333344447788888765331           12


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.+++++++++.+  .+..++.+++  ++++++++.+.++...||+++++
T Consensus       280 ~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       280 REHVWPLLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHHHHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence            4567889999888  4446677888  99999999999988899999875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=2.7e-30  Score=235.18  Aligned_cols=301  Identities=27%  Similarity=0.378  Sum_probs=231.8

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      |+++++..++   .+.+++.+.|.++++||+||+.++++|+.|+....|...     .......|.++|+|++|+|+.+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-----~~~~~~~~~~~g~e~~G~v~~~G   75 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLK-----AAFPLTLPLIPGHDVAGVVVAVG   75 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCcc-----ccCCCCCCCccccceeEEEEeeC
Confidence            5677777553   366778888888999999999999999999988774321     00123457889999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++++++++||+|+..+..                         ...|+|++|+.++.+.++++|+++++..++.+. .+.
T Consensus        76 ~~~~~~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  130 (309)
T cd05289          76 PGVTGFKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGL  130 (309)
T ss_pred             CCCCCCCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHH
Confidence            999999999999864210                         126899999999999999999999988887765 677


Q ss_pred             HHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      ++++++.. ..+.+++++||+| +|.+|++++++++..|+ .++++..++ +.++++++|++.+++...  .++..    
T Consensus       131 ~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~----  202 (309)
T cd05289         131 TAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK--GDFER----  202 (309)
T ss_pred             HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh----
Confidence            88888865 5589999999999 59999999999999999 566666666 788888899877665432  23322    


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc--CCChHHHHHHHHC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRS  326 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~  326 (366)
                        ...+.++|++++++++. ....++++++++|+++.+|.......    ....++..+......  .+.++++++++++
T Consensus       203 --~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (309)
T cd05289         203 --AAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEA  275 (309)
T ss_pred             --ccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHC
Confidence              12356799999999976 78899999999999999986443211    222333443333222  4578889999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +.+  .+.+++.|++  ++++++++.+..+...+|+++
T Consensus       276 ~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         276 GKL--RPVVDRVFPL--EDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             CCE--EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence            987  4456778888  999999999998888888874

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=9.5e-30  Score=232.98  Aligned_cols=305  Identities=30%  Similarity=0.485  Sum_probs=239.7

Q ss_pred             ceEEEEee---CCceEEEEecCCCCC-CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           15 NMAAWLLG---IKTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        15 ~~~~~~~~---~~~~~~~~~~~p~~~-~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      |+++++..   +..+.+.+.+ |.+. +++++|++.++++|+.|+....|...       .....|.++|+|++|+|+.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~   72 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQ-------VKPPLPFVPGSEVAGVVEAV   72 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCC-------CCCCCCCcccceeEEEEEEe
Confidence            57777763   2457787777 7666 59999999999999999987763210       11234678999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc-hhh
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPL  169 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~-~~~  169 (366)
                      |++++.+++||+|+..+                            ..|++++|+.++.+.++++|+++++.+++.+ ..+
T Consensus        73 g~~~~~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  124 (323)
T cd08241          73 GEGVTGFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY  124 (323)
T ss_pred             CCCCCCCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence            99999999999998631                            2589999999999999999999998888755 478


Q ss_pred             HHHHHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          170 SVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       170 ~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      .+|+.++. ..+++++++++|+|+ |++|++++++|+..|+ .+++++.++++.+.++++|++..++.  ...++...+.
T Consensus       125 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~  201 (323)
T cd08241         125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY--RDPDLRERVK  201 (323)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeec--CCccHHHHHH
Confidence            88888875 578899999999995 9999999999999999 58888888889999999998776653  2345656655


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce-eechHhhhcCcEEEEeecc----------CCC
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY----------RST  316 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~  316 (366)
                      .+.  .+.++|++++++|+ .....++++++++|+++.+|....... ........++.++.+....          ...
T Consensus       202 ~~~--~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (323)
T cd08241         202 ALT--GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRAN  278 (323)
T ss_pred             HHc--CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHH
Confidence            543  25679999999997 578889999999999999886443222 2222345667777766432          135


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++++++++.++.+  .+..++.|++  +++.++++.+.++...+|++++
T Consensus       279 ~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         279 LAELFDLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence            6788999999988  4456678888  9999999999988888898874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.98  E-value=5.4e-32  Score=261.96  Aligned_cols=320  Identities=19%  Similarity=0.215  Sum_probs=256.6

Q ss_pred             ccccccccCCcccceEEEEe----eC-CceEEEEecCC---CCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccC
Q 017793            2 AEAIRDDEGDKNQNMAAWLL----GI-KTLKIQPYHLP---TLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIV   73 (366)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~p---~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~   73 (366)
                      ||.....+.......+|++.    +. +.++|.+.|..   +..++.-+.-|.|+.||.+|+....|++..+..+|.. .
T Consensus      1400 RHl~le~~~~~~~~ehAfvntLtrGDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~-a 1478 (2376)
T KOG1202|consen 1400 RHLKLEEDKPELPVEHAFVNTLTRGDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDL-A 1478 (2376)
T ss_pred             eeeEecccCCCcchHHHHHHHhhhccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCcc-c
Confidence            44444444333334455444    33 78999988865   3377778999999999999999999999888887775 5


Q ss_pred             CCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEE
Q 017793           74 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK  153 (366)
Q Consensus        74 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~  153 (366)
                      ...+++|-||+|+          .+.|.||+.+                            ..--++++.+.++.++++.
T Consensus      1479 ~qdclLGmEFsGR----------d~~GrRvM~m----------------------------vpAksLATt~l~~rd~lWe 1520 (2376)
T KOG1202|consen 1479 SQDCLLGMEFSGR----------DASGRRVMGM----------------------------VPAKSLATTVLASRDFLWE 1520 (2376)
T ss_pred             hhhheeceeeccc----------cCCCcEEEEe----------------------------eehhhhhhhhhcchhhhhh
Confidence            6789999999999          6889999974                            2356788999999999999


Q ss_pred             CCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793          154 LPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD  230 (366)
Q Consensus       154 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~-G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  230 (366)
                      +|++..+++|++.+ .++||||++ .+++.|+|+++||| |+|++|++||.+|.+.|+ .|+.+..++||++++++.-..
T Consensus      1521 vP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPq 1599 (2376)
T KOG1202|consen 1521 VPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQ 1599 (2376)
T ss_pred             CCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchh
Confidence            99999999999998 799999998 68999999999999 589999999999999999 688888999999988764321


Q ss_pred             --eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechH-hhhcCcEE
Q 017793          231 --ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-AAAREVDV  307 (366)
Q Consensus       231 --~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~  307 (366)
                        .-..-++.+.+|..-+.+  .+.++|+|+|+++... +.++.+++||+..|||..+|-.......++.. .+.++.++
T Consensus      1600 Lqe~~~~NSRdtsFEq~vl~--~T~GrGVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsf 1676 (2376)
T KOG1202|consen 1600 LQETNFANSRDTSFEQHVLW--HTKGRGVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSF 1676 (2376)
T ss_pred             hhhhcccccccccHHHHHHH--HhcCCCeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccce
Confidence              111113455677776644  4569999999999984 58999999999999999999666555555554 66788888


Q ss_pred             EEeecc------CCChHHHHHHHHCCCCC--CCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          308 IGIFRY------RSTWPLCIEFLRSGKID--VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       308 ~~~~~~------~~~~~~~~~~l~~g~~~--~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +|....      .+.+.++.+++++|.-.  .+|+.+++|.-  .++++||+++.+|++.||||+++
T Consensus      1677 HGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1677 HGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             eeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence            887654      45678888888876542  47888888887  99999999999999999999974

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=6.6e-30  Score=233.99  Aligned_cols=295  Identities=28%  Similarity=0.352  Sum_probs=221.4

Q ss_pred             EEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017793           27 KIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALE  106 (366)
Q Consensus        27 ~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  106 (366)
                      ++++.|.|.++++||+|++.++++|+.|+....|.....     .....|.++|+|++|+|.++|++++++++||+|+..
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-----~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~   89 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLL-----LGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGR   89 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCccc-----ccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEe
Confidence            778889999999999999999999999998876322100     012346789999999999999999999999999864


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHHh-CCCCCC
Q 017793          107 PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPE  184 (366)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~  184 (366)
                      ..                         ....|+|++|+.++.+.++++|+++++++++.+. .+.+||++++. .+++++
T Consensus        90 ~~-------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g  144 (319)
T cd08267          90 LP-------------------------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPG  144 (319)
T ss_pred             cc-------------------------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCC
Confidence            21                         0136899999999999999999999998887765 78889999865 558999


Q ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          185 TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       185 ~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      ++++|+|+ |++|++++++|+..|+ .+++++.+ ++.++++++|++.+++...  .++.   ..  ...++++|++++|
T Consensus       145 ~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~--~~~~~~~d~vi~~  215 (319)
T cd08267         145 QRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---AL--TAGGEKYDVIFDA  215 (319)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hh--ccCCCCCcEEEEC
Confidence            99999994 9999999999999999 67777655 7888889999877766432  2332   11  1235679999999


Q ss_pred             CCCh-HHHHHHHHhhcCCceEEEEcccCCCceeec-----h-HhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCCceE
Q 017793          264 VGFD-KTMSTALNATRPGGKVCLIGLAKTEMTVAL-----T-PAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLIT  336 (366)
Q Consensus       264 ~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~  336 (366)
                      +++. ......+..++++|+++.+|..........     . ....+.+.........+.+++++++++++.+  .+.++
T Consensus       216 ~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~  293 (319)
T cd08267         216 VGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVID  293 (319)
T ss_pred             CCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--eeeee
Confidence            9853 233344445999999999986543221111     1 1111222222211125568889999999988  44567


Q ss_pred             EEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          337 HRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       337 ~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +.|++  ++++++++.+.++...+|+++
T Consensus       294 ~~~~~--~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         294 SVYPL--EDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             eEEcH--HHHHHHHHHHhcCCCCCcEeC
Confidence            88888  999999999999888888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=4.9e-29  Score=229.98  Aligned_cols=296  Identities=25%  Similarity=0.359  Sum_probs=229.9

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV  103 (366)
Q Consensus        24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V  103 (366)
                      ..+.+.+.+.|.+.+++|+||+.++++|++|+.+..|.+.       .....|.++|+|++|+|+.+|+++++|++||+|
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V   84 (337)
T cd08275          12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYD-------SAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRV   84 (337)
T ss_pred             cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-------CCCCCCCCCcceeEEEEEEECCCCcCCCCCCEE
Confidence            3678888888888999999999999999999987763210       112457789999999999999999999999999


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHH-hCCC
Q 017793          104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANV  181 (366)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~  181 (366)
                      +..                            ...|+|++|+.++.+.++++|+++++++++.+. .+.++|+++. ..++
T Consensus        85 ~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~  136 (337)
T cd08275          85 MGL----------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL  136 (337)
T ss_pred             EEe----------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC
Confidence            863                            125899999999999999999999988887765 7888998874 5789


Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEc-CChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          182 GPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITD-VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       182 ~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +++++|+|+|+ |.+|++++++|+.. . .+.++. ..+++.++++++|++.+++..  ..++...+....   ++++|+
T Consensus       137 ~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~---~~~~d~  209 (337)
T cd08275         137 RPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYR--TQDYVEEVKKIS---PEGVDI  209 (337)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCC--CCcHHHHHHHHh---CCCceE
Confidence            99999999995 99999999999998 2 223332 345577888889987766643  345666655443   467999


Q ss_pred             EEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc--ee---------------echHhhhcCcEEEEeecc---------
Q 017793          260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TV---------------ALTPAAAREVDVIGIFRY---------  313 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~---------  313 (366)
                      ++||+|+. ....++++++++|+++.+|......  ..               .......++..+.+....         
T Consensus       210 v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (337)
T cd08275         210 VLDALGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELL  288 (337)
T ss_pred             EEECCcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHH
Confidence            99999975 6788999999999999988543211  11               112345566666665422         


Q ss_pred             CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 ~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ...+.++++++.++.+  .+...+.|++  ++++++++.+.++...||+++++
T Consensus       289 ~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         289 TEVMDKLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            1236778889999987  4446678888  99999999999998899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=6.5e-29  Score=223.90  Aligned_cols=276  Identities=26%  Similarity=0.332  Sum_probs=217.3

Q ss_pred             CcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCcccc
Q 017793           39 QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCK  118 (366)
Q Consensus        39 ~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~  118 (366)
                      +||+||+.++++|++|++...|         .. ..+|.++|+|++|+|+++|+++++|++||+|++.            
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g---------~~-~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~------------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALG---------LL-PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL------------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhC---------CC-CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE------------
Confidence            5899999999999999998873         22 2357899999999999999999999999999863            


Q ss_pred             CCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEEC-CCHH
Q 017793          119 AGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPI  195 (366)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G-~g~v  195 (366)
                                       ..|+|+||+.++.+.++++|+++++.+++.+. +..+++.++ +..++++|++++|+| +|++
T Consensus        59 -----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~  121 (293)
T cd05195          59 -----------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGV  121 (293)
T ss_pred             -----------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHH
Confidence                             25899999999999999999999998888774 778888887 447899999999997 7999


Q ss_pred             HHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHH
Q 017793          196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA  273 (366)
Q Consensus       196 G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~  273 (366)
                      |++++|+++..|+ .++++..++++.+.+++++  ++..++.  ...++.+.+.+..  .+.++|+++|++|+. .++.+
T Consensus       122 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~  195 (293)
T cd05195         122 GQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSS--RDLSFADGILRAT--GGRGVDVVLNSLSGE-LLRAS  195 (293)
T ss_pred             HHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeec--CchhHHHHHHHHh--CCCCceEEEeCCCch-HHHHH
Confidence            9999999999999 6888888888888888888  5666553  2245555555443  256899999999987 88999


Q ss_pred             HHhhcCCceEEEEcccCCCc--eeechHhhhcCcEEEEeecc----------CCChHHHHHHHHCCCCCCCCceEEEecC
Q 017793          274 LNATRPGGKVCLIGLAKTEM--TVALTPAAAREVDVIGIFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGF  341 (366)
Q Consensus       274 ~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l  341 (366)
                      +++++++|+++.+|......  ..... .+.++..+......          .+.+.++++++.++.+  .+...+.+.+
T Consensus       196 ~~~l~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  272 (293)
T cd05195         196 WRCLAPFGRFVEIGKRDILSNSKLGMR-PFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS  272 (293)
T ss_pred             HHhcccCceEEEeeccccccCCccchh-hhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech
Confidence            99999999999988554221  11111 12233343332211          2356788899999988  4555667788


Q ss_pred             ChhhHHHHHHHHHcCCCceEEEe
Q 017793          342 TQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       342 ~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                        ++++++++.+.++...||+++
T Consensus       273 --~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         273 --ASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             --hhHHHHHHHHhcCCCCceecC
Confidence              999999999999888888874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=2.9e-28  Score=218.89  Aligned_cols=248  Identities=28%  Similarity=0.418  Sum_probs=198.0

Q ss_pred             cCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecC
Q 017793           69 ANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA  148 (366)
Q Consensus        69 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~  148 (366)
                      +.++.++|.++|+|++|+|+++|+++++|++||+|+..                               ++|++|++++.
T Consensus        14 ~~~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~   62 (277)
T cd08255          14 GTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPA   62 (277)
T ss_pred             cCccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCH
Confidence            45566789999999999999999999999999999852                               46899999999


Q ss_pred             CceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017793          149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG  228 (366)
Q Consensus       149 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg  228 (366)
                      +.++++|+++++++++.+..+.+||+++...++++++++||+|+|++|++++++|+.+|+++++++++++++.++++++|
T Consensus        63 ~~~~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g  142 (277)
T cd08255          63 NLLVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALG  142 (277)
T ss_pred             HHeeECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcC
Confidence            99999999999888887777888999988888999999999999999999999999999955899989999999999999


Q ss_pred             -CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeec-hHhhhcCcE
Q 017793          229 -ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVD  306 (366)
Q Consensus       229 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~  306 (366)
                       ++.+..+..          ..  ..++++|++||+++........+++++++|+++.+|..... .... ..+..+..+
T Consensus       143 ~~~~~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~  209 (277)
T cd08255         143 PADPVAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLP  209 (277)
T ss_pred             CCccccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCe
Confidence             454433211          01  12568999999998777889999999999999999865443 2111 123333444


Q ss_pred             EEEeecc-------------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcC-CCceEEEe
Q 017793          307 VIGIFRY-------------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMF  364 (366)
Q Consensus       307 ~~~~~~~-------------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi  364 (366)
                      +.+....             .+.+++++++++++.+  .+.+.+.|++  ++++++++.++++ ....|+++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         210 IRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             EEeecccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence            4444321             2568899999999997  4445677888  9999999999877 45677764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=9.2e-28  Score=216.12  Aligned_cols=271  Identities=27%  Similarity=0.386  Sum_probs=212.4

Q ss_pred             EEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCC
Q 017793           43 VRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY  122 (366)
Q Consensus        43 Vkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~  122 (366)
                      ||+.++++|++|+....|         ..  ..|.++|+|++|+|+++|++++.|++||+|+..                
T Consensus         2 i~v~~~~i~~~d~~~~~g---------~~--~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~----------------   54 (288)
T smart00829        2 VEVRAAGLNFRDVLIALG---------LL--PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL----------------   54 (288)
T ss_pred             eeEEEEecCHHHHHHhcC---------CC--CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE----------------
Confidence            899999999999988772         22  136789999999999999999999999999853                


Q ss_pred             CCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEEC-CCHHHHHH
Q 017793          123 NLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVT  199 (366)
Q Consensus       123 ~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~a  199 (366)
                                   ..|+|+||+.++.+.++++|+++++++++.+. ...+++.++ +...++++++|+|+| +|.+|+++
T Consensus        55 -------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~  121 (288)
T smart00829       55 -------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAA  121 (288)
T ss_pred             -------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHH
Confidence                         25899999999999999999999999888775 777888887 568899999999998 69999999


Q ss_pred             HHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhh
Q 017793          200 LLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT  277 (366)
Q Consensus       200 i~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l  277 (366)
                      +++++..|+ .++++++++++.++++++|+  +.++++.  ..++.+.+....  .++++|+++|++++ ......++++
T Consensus       122 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l  195 (288)
T smart00829      122 IQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCL  195 (288)
T ss_pred             HHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhc
Confidence            999999999 68888888999999999998  5665542  245555554443  25679999999995 5788899999


Q ss_pred             cCCceEEEEcccCCC--ceeechHhhhcCcEEEEeecc---------CCChHHHHHHHHCCCCCCCCceEEEecCChhhH
Q 017793          278 RPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI  346 (366)
Q Consensus       278 ~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~  346 (366)
                      +++|+++.+|.....  ...+... +.++..+.+....         .+.+++++++++++.+.+  ...+.|++  +++
T Consensus       196 ~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~  270 (288)
T smart00829      196 APGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPI--SDV  270 (288)
T ss_pred             cCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcH--HHH
Confidence            999999999854321  1112111 2334444333211         234667888999998843  34567888  999


Q ss_pred             HHHHHHHHcCCCceEEEe
Q 017793          347 EDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       347 ~~a~~~~~~~~~~gkvvi  364 (366)
                      +++++.+..+...+|+++
T Consensus       271 ~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      271 EDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             HHHHHHHhcCCCcceEeC
Confidence            999999999887888874

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.95  E-value=1e-25  Score=191.77  Aligned_cols=282  Identities=16%  Similarity=0.183  Sum_probs=217.2

Q ss_pred             CCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccc----cceeEEEEEeCCCCCCCCCCCEEEEcCCcC
Q 017793           35 TLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIG----HECAGIIEEVGSEVKSLEVGDRVALEPGIS  110 (366)
Q Consensus        35 ~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~  110 (366)
                      ++++++||||..|.+..|.-.-.+.-     +.+..  --.|+.+|    ..++|+|++.  +.+++++||.|...    
T Consensus        34 ~~~s~~vlvknlYLS~DPymR~rM~~-----~~~~~--y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~----  100 (343)
T KOG1196|consen   34 PLGSGEVLVKNLYLSCDPYMRIRMGK-----PDPSD--YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGI----  100 (343)
T ss_pred             CCCCccEEeEeeeecCCHHHHhhccC-----CCccc--ccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEe----
Confidence            46999999999999999887644441     11111  11223333    3778999885  66789999999752    


Q ss_pred             CCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCc--eEECCC--C--CCccccccchhhHHHHHHH-HhCCCCC
Q 017793          111 CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYKLPD--N--VSLEEGAMCEPLSVGVHAC-RRANVGP  183 (366)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~--~~~~P~--~--~~~~~aa~~~~~~~a~~~l-~~~~~~~  183 (366)
                                                 -+|.||.+++++.  .+++|.  +  +++-..++-++..|||.++ +....++
T Consensus       101 ---------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~  153 (343)
T KOG1196|consen  101 ---------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKK  153 (343)
T ss_pred             ---------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCC
Confidence                                       2799999998753  444444  2  3344444556889999998 5688999


Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      |++|+|-| +|++|+.+.|+||.+|+ .||++..++||..+++. +|.|..+||.+ +.+..++++..   .+.|+|+.|
T Consensus       154 geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~-e~~~~~aL~r~---~P~GIDiYf  228 (343)
T KOG1196|consen  154 GETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE-ESDLSAALKRC---FPEGIDIYF  228 (343)
T ss_pred             CCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC-ccCHHHHHHHh---CCCcceEEE
Confidence            99999998 79999999999999999 89999999999998865 79999999954 35777777664   378999999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCC---Ccee---echHhhhcCcEEEEeecc------CCChHHHHHHHHCCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKT---EMTV---ALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~  329 (366)
                      |++|+. .++..+..|...||++.+|+.+.   ..+.   .....+.+++++.++...      .+.++.+..++++|+|
T Consensus       229 eNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI  307 (343)
T KOG1196|consen  229 ENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKI  307 (343)
T ss_pred             eccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCce
Confidence            999976 89999999999999999996542   1122   223467788888886543      5667889999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .....+.  -+|  ++.+.|+.-+-.|+..||.++.+
T Consensus       308 ~y~edi~--~Gl--en~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  308 TYVEDIA--DGL--ENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             EEehhHH--HHH--hccHHHHHHHhccCcccceEEEe
Confidence            6555543  357  99999999999999999998864

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.88  E-value=6.3e-23  Score=157.12  Aligned_cols=109  Identities=39%  Similarity=0.745  Sum_probs=96.4

Q ss_pred             CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccc
Q 017793           38 PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLC  117 (366)
Q Consensus        38 ~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~  117 (366)
                      |+||+|||+++|||++|+++++|.       .......|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~-------~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c   73 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGG-------PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYC   73 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTS-------SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHH
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhc-------cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhh
Confidence            789999999999999999999942       2344678999999999999999999999999999999998889999999


Q ss_pred             cCCCCCCCCCccccCCCCCCCcceEEEEecCCceEEC
Q 017793          118 KAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL  154 (366)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~  154 (366)
                      ..+.+++|+....++.. .+|+|+||+.+++++++|+
T Consensus        74 ~~~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   74 LSGRPNLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             HTTTGGGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred             cCCccccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence            99999999998887763 8999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.72  E-value=1e-16  Score=126.94  Aligned_cols=128  Identities=28%  Similarity=0.569  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHH
Q 017793          194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA  273 (366)
Q Consensus       194 ~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~  273 (366)
                      ++|++++|+|+..|+ +|++++++++|+++++++|++.+++++.  .++.+.++++..  +.++|+||||+|.+..++.+
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~--~~~~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTG--GRGVDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTT--TSSEEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccc--cccceEEEEecCcHHHHHHH
Confidence            589999999999995 8999999999999999999999988654  567777776642  46899999999988899999


Q ss_pred             HHhhcCCceEEEEcccC-CCceeechHhhhcCcEEEEeeccC-CChHHHHHHHHC
Q 017793          274 LNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRYR-STWPLCIEFLRS  326 (366)
Q Consensus       274 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~  326 (366)
                      +++++++|+++.+|... ....++...++.+++++.+++.+. ++++++++++.+
T Consensus        76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            99999999999999887 667788888999999999999885 889999988864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.41  E-value=5.1e-12  Score=120.14  Aligned_cols=155  Identities=16%  Similarity=0.230  Sum_probs=113.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCC-----------cchHHHHHH
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDI-----------EDVDTDVGK  248 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~-----------~~~~~~~~~  248 (366)
                      ..++++|+|+|+|.+|++|++.|+.+|+ .|++++.++++.+.++++|++.+ ++..+..           +++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4689999999999999999999999999 79999999999999999999854 4432211           122222222


Q ss_pred             HHHhhCCCCcEEEEcCCChH-----H-HHHHHHhhcCCceEEEEccc-CCC--ceeechHhhh-cCcEEEEeeccCCChH
Q 017793          249 IQNAMGSGIDVSFDCVGFDK-----T-MSTALNATRPGGKVCLIGLA-KTE--MTVALTPAAA-REVDVIGIFRYRSTWP  318 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~  318 (366)
                      ......+++|++|+|++.+.     . .+..++.++++|+++.++.. .+.  ...+...++. +++++.|.+..+..+.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p  320 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP  320 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence            21112257999999999643     4 48999999999999999864 332  2333344554 7899999887655555


Q ss_pred             -HHHHHHHCCCCCCCCceE
Q 017793          319 -LCIEFLRSGKIDVKPLIT  336 (366)
Q Consensus       319 -~~~~~l~~g~~~~~~~~~  336 (366)
                       ++.+++.++.+++.+.++
T Consensus       321 ~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        321 TQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHHHhCCccHHHHhc
Confidence             699999999886555544

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.40  E-value=1.9e-11  Score=113.40  Aligned_cols=171  Identities=19%  Similarity=0.279  Sum_probs=134.8

Q ss_pred             HHHH-Hh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          173 VHAC-RR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       173 ~~~l-~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +.++ +. ...-+|++|+|.|+|.+|+.+++.++..|+ +|++++.++.|.+.++++|++.+ +       ..    +. 
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~----e~-  254 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------ME----EA-  254 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HH----HH-
Confidence            4555 33 334689999999999999999999999999 68889999999999999998432 1       11    11 


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHH-HHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCC--ChH--HHHHHHH
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTA-LNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS--TWP--LCIEFLR  325 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~l~  325 (366)
                         -.++|+|++|.|....++.. ++.++++|+++.+|..  +..++...+..+.+++.++..+..  .++  ..+.++.
T Consensus       255 ---v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa  329 (413)
T cd00401         255 ---VKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLA  329 (413)
T ss_pred             ---HcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhh
Confidence               13689999999998878775 8999999999999854  446777778888899998887733  455  7999999


Q ss_pred             CCCC-CCCCceEEE-----ecCChh-hHHHHHHHHHcCCC-ceEEEe
Q 017793          326 SGKI-DVKPLITHR-----FGFTQK-EIEDAFEISAQGGN-AIKVMF  364 (366)
Q Consensus       326 ~g~~-~~~~~~~~~-----~~l~~~-~~~~a~~~~~~~~~-~gkvvi  364 (366)
                      +|.+ ++.+.+.|.     ++|  + ++.+++..+.++.. ..|+++
T Consensus       330 ~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~  374 (413)
T cd00401         330 EGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYF  374 (413)
T ss_pred             CcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEE
Confidence            9999 777777777     778  7 99999999887644 246654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.30  E-value=9.5e-13  Score=103.63  Aligned_cols=117  Identities=29%  Similarity=0.391  Sum_probs=78.2

Q ss_pred             cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC--ChHHHHHHHHhhcCCceEEEEcccCCCceeechH--hhh
Q 017793          227 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG--FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--AAA  302 (366)
Q Consensus       227 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~  302 (366)
                      ||++++++|.+  +++         ...+++|+|||++|  +...+..++++| ++|+++.++.     ......  ...
T Consensus         1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHC
T ss_pred             CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcc
Confidence            69999999863  344         23679999999999  654456777888 9999998874     100111  111


Q ss_pred             cCcEEEEeec------cCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          303 REVDVIGIFR------YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       303 ~~~~~~~~~~------~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      ...+......      ..+.++++.+++++|++  ++.+.++|+|  +++++|++.++++...||+|+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred             cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence            2233333321      23459999999999999  8888899999  999999999999999999996

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.68  E-value=2.9e-07  Score=82.29  Aligned_cols=173  Identities=17%  Similarity=0.248  Sum_probs=107.1

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ...++++++||.+|+|. |..++++++..|.. +|++++.+++..+.+++.    +.+.+....   .++    ..+. .
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d~----~~l~-~  142 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GEI----EALP-V  142 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cch----hhCC-C
Confidence            46688999999999988 98888888887763 699999999988888763    333221111   111    1111 1


Q ss_pred             hCCCCcEEEEcC------CChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEe-eccCCChHHHHHHHH
Q 017793          253 MGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI-FRYRSTWPLCIEFLR  325 (366)
Q Consensus       253 ~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~  325 (366)
                      ..+.||+|+...      .....+..+.+.|++||+++..+..... ..  .....+...+.+. .......++..++++
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  219 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-EL--PEEIRNDAELYAGCVAGALQEEEYLAMLA  219 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CC--CHHHHHhHHHHhccccCCCCHHHHHHHHH
Confidence            135799998543      2245788999999999999987654322 11  1111122222211 122345677778887


Q ss_pred             CCCC-CCCCceEEEecCChhhHHHHHHHH--HcCCCceEEEe
Q 017793          326 SGKI-DVKPLITHRFGFTQKEIEDAFEIS--AQGGNAIKVMF  364 (366)
Q Consensus       326 ~g~~-~~~~~~~~~~~l~~~~~~~a~~~~--~~~~~~gkvvi  364 (366)
                      +.-+ .......+.+.+  +++.++++.+  ..+...++.+.
T Consensus       220 ~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        220 EAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             HCCCCceEEEeccceec--ccHHHHHHHhccccccccCceEE
Confidence            7444 223333345666  8888999888  55555555543

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.58  E-value=7.8e-07  Score=84.85  Aligned_cols=107  Identities=17%  Similarity=0.271  Sum_probs=80.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceee-ecCCC-----------CcchHHHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-KVSTD-----------IEDVDTDVGKI  249 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~-~~~~~-----------~~~~~~~~~~~  249 (366)
                      .++++++|+|+|.+|++++++++.+|+ .|++++.++++.+.++++|++.+. +..++           ..++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            367999999999999999999999999 588999999999999999987532 21110           12333333333


Q ss_pred             HHhhCCCCcEEEEcC---CChH---HHHHHHHhhcCCceEEEEccc
Q 017793          250 QNAMGSGIDVSFDCV---GFDK---TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       250 ~~~~~~~~d~vld~~---g~~~---~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      ......++|++|+|+   |.+.   .....++.+++|+.++.++..
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d  286 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE  286 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence            332346799999999   5443   567788999999999988743

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.39  E-value=1.4e-05  Score=70.51  Aligned_cols=131  Identities=21%  Similarity=0.347  Sum_probs=85.4

Q ss_pred             ceEEEEecCCceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          140 LAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       140 ~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      |.+|.. +...++++++++++..+... ........+... .+++.+||-.|+|. |..++.+++ .|+..+++++.++.
T Consensus        79 ~~~~~~-~~~~~i~i~p~~afgtg~h~-tt~~~l~~l~~~-~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~  153 (250)
T PRK00517         79 WEDPPD-PDEINIELDPGMAFGTGTHP-TTRLCLEALEKL-VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQ  153 (250)
T ss_pred             CcCCCC-CCeEEEEECCCCccCCCCCH-HHHHHHHHHHhh-cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHH
Confidence            344433 56678899998888776532 222223333322 57889999999987 888887655 67767999999999


Q ss_pred             HHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEcccC
Q 017793          220 RLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       220 ~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      ..+.+++.    +....+....               +...||+|+.+....   ..+..+.+.|+++|.+++.|...
T Consensus       154 ~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~  216 (250)
T PRK00517        154 AVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE  216 (250)
T ss_pred             HHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence            88877653    2211011000               011599999876543   34567888899999999876443

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.28  E-value=8.8e-06  Score=68.01  Aligned_cols=114  Identities=16%  Similarity=0.200  Sum_probs=83.7

Q ss_pred             cccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH----HHHHHcCCceeeecCCC
Q 017793          163 GAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVSTD  238 (366)
Q Consensus       163 aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~~~  238 (366)
                      .-++........+++...++++++||-+|+|. |..+.-+++..+  +|+++++.++=.    ..++.+|.+.+.....+
T Consensus        52 gqtis~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD  128 (209)
T COG2518          52 GQTISAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD  128 (209)
T ss_pred             CceecCcHHHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence            33444444455667888899999999999987 999999999888  799999888733    34566887654433222


Q ss_pred             -CcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793          239 -IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       239 -~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                       ...|.         ....||.++-+.+.+......++.|++||+++..-.
T Consensus       129 G~~G~~---------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         129 GSKGWP---------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             cccCCC---------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence             11111         136899999988888777889999999999987533

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.26  E-value=2.7e-06  Score=77.34  Aligned_cols=108  Identities=20%  Similarity=0.304  Sum_probs=81.5

Q ss_pred             CceEECCCCCCccccccchhhHHHHHHHHhCCC----CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH-HH
Q 017793          149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANV----GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SI  223 (366)
Q Consensus       149 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~----~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~  223 (366)
                      ...+++|+.+..+.++...+.++++.+++.+..    -++.+|+|+|+|.+|..+++.++..|+..|+++++++++. ++
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l  218 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL  218 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            457788999999999888788888877754332    3789999999999999999999988877888888888764 67


Q ss_pred             HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHH
Q 017793          224 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT  269 (366)
Q Consensus       224 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~  269 (366)
                      ++++|+. +.++    .+    +.+.    -..+|+||.|++.+..
T Consensus       219 a~~~g~~-~~~~----~~----~~~~----l~~aDvVi~at~~~~~  251 (311)
T cd05213         219 AKELGGN-AVPL----DE----LLEL----LNEADVVISATGAPHY  251 (311)
T ss_pred             HHHcCCe-EEeH----HH----HHHH----HhcCCEEEECCCCCch
Confidence            8888873 2221    11    2222    1358999999998754

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.23  E-value=2.5e-05  Score=73.23  Aligned_cols=102  Identities=24%  Similarity=0.260  Sum_probs=78.0

Q ss_pred             HHHHHHhC-CCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          172 GVHACRRA-NVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       172 a~~~l~~~-~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +|.++.+. ++. .|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++. .       +.    .+.
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~v-~-------~l----~ea  264 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFRV-M-------TM----EEA  264 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCEe-c-------CH----HHH
Confidence            45666554 444 89999999999999999999999999 7999988888876666666542 1       11    122


Q ss_pred             HHhhCCCCcEEEEcCCChHHHH-HHHHhhcCCceEEEEcccC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  290 (366)
                      .    .++|+++++.|....++ ..+..+++++.++..|...
T Consensus       265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence            1    36999999999877676 5778899999998887654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.20  E-value=4.5e-05  Score=68.76  Aligned_cols=111  Identities=15%  Similarity=0.237  Sum_probs=80.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.+++|+|.|.+|..+++.++.+|+ .|.++++++++.+.++++|+..+ .+        ..+.+.    -..+|+||+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~----l~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEE----VGKIDIIFN  216 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHH----hCCCCEEEE
Confidence            58999999999999999999999999 78888898888888888886532 11        112222    246999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEE
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG  309 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  309 (366)
                      |++..-.....++.+++++.++.++..++...+  ...-...++..+
T Consensus       217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~  261 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALL  261 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEE
Confidence            998553445667889999999988866655443  233334455543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.11  E-value=1.8e-07  Score=88.39  Aligned_cols=159  Identities=18%  Similarity=0.252  Sum_probs=102.9

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCC
Q 017793           78 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN  157 (366)
Q Consensus        78 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~  157 (366)
                      .-|.|+++.+.+|+++++.     .|++-+.. ||+|.+|    +..|.+....|. .-++.|++++.+.. .+..    
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~----  152 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRT----  152 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhh----
Confidence            3689999999999999876     55555566 8889888    333444433332 34678888887764 2211    


Q ss_pred             CCccccccchhhHHHHHHH----HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee
Q 017793          158 VSLEEGAMCEPLSVGVHAC----RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET  232 (366)
Q Consensus       158 ~~~~~aa~~~~~~~a~~~l----~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~  232 (366)
                         +....-.+.+.++.++    +.....++.+++|+|+|.+|..+++.++..|+..|++++++.++.+ ++++++... 
T Consensus       153 ---~t~i~~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-  228 (417)
T TIGR01035       153 ---ETDISAGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-  228 (417)
T ss_pred             ---hcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-
Confidence               1111011222233332    2333467899999999999999999999999768888888887754 777777632 


Q ss_pred             eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChH
Q 017793          233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK  268 (366)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  268 (366)
                      +.+       . .+.+.    -.++|+||+|++.+.
T Consensus       229 i~~-------~-~l~~~----l~~aDvVi~aT~s~~  252 (417)
T TIGR01035       229 VKF-------E-DLEEY----LAEADIVISSTGAPH  252 (417)
T ss_pred             eeH-------H-HHHHH----HhhCCEEEECCCCCC
Confidence            221       1 12222    136999999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.00  E-value=8.7e-05  Score=69.23  Aligned_cols=101  Identities=24%  Similarity=0.274  Sum_probs=76.3

Q ss_pred             HHHHHh-CC-CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          173 VHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       173 ~~~l~~-~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +.++.+ .+ ...|++|+|+|.|.+|...++.++..|+ +|++++.++.+...+...|+.. ..       ..+    ..
T Consensus       182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~v-~~-------lee----al  248 (406)
T TIGR00936       182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFRV-MT-------MEE----AA  248 (406)
T ss_pred             HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCEe-CC-------HHH----HH
Confidence            444433 23 3689999999999999999999999999 6888988888777767667632 11       111    11


Q ss_pred             HhhCCCCcEEEEcCCChHHHHH-HHHhhcCCceEEEEcccC
Q 017793          251 NAMGSGIDVSFDCVGFDKTMST-ALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~-~~~~l~~~G~~v~~g~~~  290 (366)
                          .+.|++|++.|....++. .+..+++++.++.+|...
T Consensus       249 ----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       249 ----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             ----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence                357999999998877764 788899999998887553

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=97.82  E-value=0.00017  Score=67.96  Aligned_cols=101  Identities=23%  Similarity=0.271  Sum_probs=76.6

Q ss_pred             HHHHHh-CC-CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          173 VHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       173 ~~~l~~-~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +.++.+ .+ .-.|++++|.|.|.+|...++.++..|+ +|++++.++.+...+...|+...        ...+    ..
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leE----al  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLED----VV  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHH----HH
Confidence            445532 23 3579999999999999999999999999 78989888877666666776421        1111    21


Q ss_pred             HhhCCCCcEEEEcCCChHH-HHHHHHhhcCCceEEEEcccC
Q 017793          251 NAMGSGIDVSFDCVGFDKT-MSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~-~~~~~~~l~~~G~~v~~g~~~  290 (366)
                          ..+|+++++.|+... ....+..|++++.++.+|...
T Consensus       308 ----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        308 ----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             ----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence                258999999998765 477889999999999998643

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.80  E-value=4.8e-05  Score=72.28  Aligned_cols=159  Identities=19%  Similarity=0.281  Sum_probs=99.5

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCC
Q 017793           78 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN  157 (366)
Q Consensus        78 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~  157 (366)
                      .-|+|+++.+.+|+++++..-+|+.     .. +|+|....    ..|...+..+ ...++.|++.        +++|+.
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~-----qI-lgQvk~a~----~~a~~~g~~g-~~l~~lf~~a--------~~~~k~  151 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEP-----QI-LGQVKDAY----ALAQEAGTVG-TILNRLFQKA--------FSVAKR  151 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCCh-----HH-HHHHHHHH----HHHHHcCCch-HHHHHHHHHH--------HHHHhh
Confidence            3599999999999999887444443     22 34444111    1111111111 1123444443        344555


Q ss_pred             CCccccccchhhHHHHHHHHhCC----CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee
Q 017793          158 VSLEEGAMCEPLSVGVHACRRAN----VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET  232 (366)
Q Consensus       158 ~~~~~aa~~~~~~~a~~~l~~~~----~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~  232 (366)
                      +..+.+....+.++++.+++.+.    -.++.+|+|+|+|.+|..+++.++..|+..+++++++.++.. +++++|.+ +
T Consensus       152 v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~  230 (423)
T PRK00045        152 VRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-A  230 (423)
T ss_pred             HhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-E
Confidence            55444444446677777775432    257899999999999999999999999878888888888755 77778753 2


Q ss_pred             eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChH
Q 017793          233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK  268 (366)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  268 (366)
                      +.+        ..+.+.    -.++|+||+|++.+.
T Consensus       231 ~~~--------~~~~~~----l~~aDvVI~aT~s~~  254 (423)
T PRK00045        231 IPL--------DELPEA----LAEADIVISSTGAPH  254 (423)
T ss_pred             eeH--------HHHHHH----hccCCEEEECCCCCC
Confidence            221        111111    246999999998764

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.80  E-value=0.00019  Score=66.80  Aligned_cols=97  Identities=19%  Similarity=0.353  Sum_probs=67.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ++.+|+|+|+|.+|+.+++.++.+|+ .|+++++++++.+.+. .++......+ .   + .+.+.+.    -..+|++|
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~-~---~-~~~l~~~----l~~aDvVI  235 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRY-S---N-AYEIEDA----VKRADLLI  235 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEecc-C---C-HHHHHHH----HccCCEEE
Confidence            34669999999999999999999999 6888988888877664 4554322111 1   1 1222222    24699999


Q ss_pred             EcCCC-----hH-HHHHHHHhhcCCceEEEEccc
Q 017793          262 DCVGF-----DK-TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       262 d~~g~-----~~-~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +|++.     +. .....++.+++++.++.++..
T Consensus       236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d  269 (370)
T TIGR00518       236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAID  269 (370)
T ss_pred             EccccCCCCCCcCcCHHHHhcCCCCCEEEEEecC
Confidence            99832     11 135677889999999998743

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.80  E-value=0.0004  Score=58.91  Aligned_cols=102  Identities=17%  Similarity=0.309  Sum_probs=71.5

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcC-CceeeecCCCCcchHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLG-ADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +....+.++++||.+|+|. |.+++.+++..+. .++++++.+++..+.++    .++ .+.+.....   +..+.+.. 
T Consensus        33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~-  107 (198)
T PRK00377         33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFT-  107 (198)
T ss_pred             HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhh-
Confidence            3567788999999999988 9999999987653 47999999998877654    356 333322222   22222222 


Q ss_pred             HHhhCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEE
Q 017793          250 QNAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~  285 (366)
                         ....+|.||...+.   ...+..+.+.|+++|+++.
T Consensus       108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence               13579999986543   3467788889999999875

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.72  E-value=2.9e-05  Score=76.75  Aligned_cols=81  Identities=21%  Similarity=0.361  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC---------------------hhHHHHHHHcCCceeeecCCC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---------------------VQRLSIARNLGADETAKVSTD  238 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~---------------------~~~~~~~~~lg~~~~~~~~~~  238 (366)
                      ..++|++|+|+|+|++|+++++.++..|+ .|++++..                     +.+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~-  210 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV-  210 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence            36789999999999999999999999999 57777642                     34667788899876544211 


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCChH
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDK  268 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  268 (366)
                      ..+..  ...+    ..++|+||+++|...
T Consensus       211 ~~~~~--~~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        211 GEDIT--LEQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             CCcCC--HHHH----HhhCCEEEEeeCCCC
Confidence            01211  1112    236999999999763

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.68  E-value=0.0034  Score=56.24  Aligned_cols=248  Identities=13%  Similarity=0.109  Sum_probs=130.0

Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccCC----CCCCCcceEEEEecCCceEECCCCC
Q 017793           84 AGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGS----PPTNGSLAHKVVHPAKLCYKLPDNV  158 (366)
Q Consensus        84 ~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~e~~~~~~~~~~~~P~~~  158 (366)
                      -++|++  |+++++.+|.||..+... +.-..      .+..-+...|...    ..-.-.|-+|.++..+..+.-    
T Consensus        38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l------~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~----  105 (314)
T PF11017_consen   38 FATVVE--SRHPGIAVGERLYGYFPMASHLVL------EPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP----  105 (314)
T ss_pred             EEEEEe--eCCCCccCccEEEeeccccceeEE------eccccCCCccccChhhhCcCchhhhceeecCCCcccCc----
Confidence            356665  888899999999975322 11000      1111111112211    112345556666665443311    


Q ss_pred             Ccccc-ccchhhHHHHHHHHh----CCCCCCCEEEEEC-CCHHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHHHcCC-c
Q 017793          159 SLEEG-AMCEPLSVGVHACRR----ANVGPETNVMIMG-SGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIARNLGA-D  230 (366)
Q Consensus       159 ~~~~a-a~~~~~~~a~~~l~~----~~~~~~~~vlI~G-~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~-~  230 (366)
                      +.+.. +++-++..+-..+..    .+.-..+.|+|.. ++-.++.....++ ..+..++|++ +|+.+..+.+.+|+ |
T Consensus       106 ~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vgl-TS~~N~~Fve~lg~Yd  184 (314)
T PF11017_consen  106 EREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGL-TSARNVAFVESLGCYD  184 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEE-ecCcchhhhhccCCce
Confidence            22222 222244433333322    2233345677776 5777877777777 5555589999 56677779999995 6


Q ss_pred             eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCce-EEEEcccCCCce-------------ee
Q 017793          231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK-VCLIGLAKTEMT-------------VA  296 (366)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~-~v~~g~~~~~~~-------------~~  296 (366)
                      +++.|++        +.++.   ...--+++|..|..+....+.+++...=+ .+.+|.......             ++
T Consensus       185 ~V~~Yd~--------i~~l~---~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FF  253 (314)
T PF11017_consen  185 EVLTYDD--------IDSLD---APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFF  253 (314)
T ss_pred             EEeehhh--------hhhcc---CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEe
Confidence            6777643        22221   34567889999999888888888877544 445554332211             11


Q ss_pred             chHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCC
Q 017793          297 LTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN  358 (366)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~  358 (366)
                      ....+.+++...|.....+.+.++++-..+.... --.+.+.-+.  +.+.++++.+.+|+.
T Consensus       254 Ap~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~-wl~~~~~~G~--ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  254 APDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQP-WLKVEEVAGP--EAVEAAYQDLLAGKV  312 (314)
T ss_pred             ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCH--HHHHHHHHHHhcCCC
Confidence            1122222333333322222222222222222221 1223456677  999999999988753

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.63  E-value=0.0011  Score=54.50  Aligned_cols=101  Identities=22%  Similarity=0.294  Sum_probs=71.1

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....+++|+.++=+|||. |..+++++..--..+++++++++++.+..+    +||.+.+.....+.   .+.+.+    
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A---p~~L~~----   99 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA---PEALPD----   99 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc---hHhhcC----
Confidence            457789999777788765 667788885444558999999999887664    58877654443332   233322    


Q ss_pred             hCCCCcEEEEcCCC--hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCVGF--DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ...+|.+|---|.  ++.++.++..|+++|+++.-
T Consensus       100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n  134 (187)
T COG2242         100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN  134 (187)
T ss_pred             -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence             1268999864443  35788899999999999864

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.61  E-value=0.00089  Score=60.88  Aligned_cols=103  Identities=22%  Similarity=0.282  Sum_probs=73.3

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .++...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++    ++|.+.+.....   +..+.+.  
T Consensus        72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~--  145 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVP--  145 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhccc--
Confidence            44556788999999999984 9999999998764 36999999998765554    466654433222   2221111  


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                         ....+|+|+.+.+.........+.|+++|+++..
T Consensus       146 ---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        146 ---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence               1246999999888666667788999999998763

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.61  E-value=0.00052  Score=61.78  Aligned_cols=97  Identities=20%  Similarity=0.298  Sum_probs=65.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADE-TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+++++||-.|||. |..++.+++ .|+.++++++.++...+.+++.    +... +.....   +.    .   .....
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~~----~---~~~~~  224 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---YL----E---QPIEG  224 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---cc----c---cccCC
Confidence            46789999999988 888877776 5777899999999887776653    2211 111111   10    0   01145


Q ss_pred             CCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEccc
Q 017793          256 GIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       256 ~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +||+|+.+....   ..+..+.+.|+++|.++..|..
T Consensus       225 ~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       225 KADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             CceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            799999876543   3456678899999999887643

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=97.58  E-value=0.0011  Score=59.02  Aligned_cols=130  Identities=20%  Similarity=0.298  Sum_probs=79.8

Q ss_pred             CceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH--
Q 017793          149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN--  226 (366)
Q Consensus       149 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~--  226 (366)
                      ..++++.+++.+-...-. +......++++. +++|.+||=.|||+ |.++|..+| +|+.+++++|.++...+.+++  
T Consensus       130 ~~~i~lDPGlAFGTG~Hp-TT~lcL~~Le~~-~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa  205 (300)
T COG2264         130 ELNIELDPGLAFGTGTHP-TTSLCLEALEKL-LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAARENA  205 (300)
T ss_pred             ceEEEEccccccCCCCCh-hHHHHHHHHHHh-hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHHH
Confidence            556677666654332111 111223334433 56899999999887 888888877 588899999999977666554  


Q ss_pred             --cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEcccC
Q 017793          227 --LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       227 --lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                        .+.+.. .... .-+.   ....   .++.||+|+.++=..   ........+++|+|++++.|...
T Consensus       206 ~~N~v~~~-~~~~-~~~~---~~~~---~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~  266 (300)
T COG2264         206 RLNGVELL-VQAK-GFLL---LEVP---ENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE  266 (300)
T ss_pred             HHcCCchh-hhcc-cccc---hhhc---ccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence              233210 0000 0000   0011   146899999887543   24556778899999999988554

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.57  E-value=0.0022  Score=54.95  Aligned_cols=104  Identities=14%  Similarity=0.203  Sum_probs=71.0

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      ..+...+++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++    +|...+.....+...   ..  
T Consensus        67 ~~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~---~~--  140 (212)
T PRK13942         67 IMCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL---GY--  140 (212)
T ss_pred             HHHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc---CC--
Confidence            344667789999999999876 7788888887764 389999999987766654    444332211111111   00  


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                         .....||.|+-............+.|+++|+++..
T Consensus       141 ---~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        141 ---EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             ---CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence               01357999977655555677888999999998875

>PRK08324 short chain dehydrogenase; Validated

Probab=97.56  E-value=0.00078  Score=68.23  Aligned_cols=140  Identities=21%  Similarity=0.306  Sum_probs=84.0

Q ss_pred             CcceEEEEecCCceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          138 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       138 g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      -++.+|..+++..++.+ +.++.+++....        .-.....+|.++||.| +|++|...++.+...|+ .|+.+++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r  454 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL  454 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence            45566777776666666 555555554210        0011223678999998 69999999999998999 6888888


Q ss_pred             ChhHHHHH-HHcCC-cee----eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh-----------------------
Q 017793          217 DVQRLSIA-RNLGA-DET----AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-----------------------  267 (366)
Q Consensus       217 ~~~~~~~~-~~lg~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-----------------------  267 (366)
                      +.++.+.+ ++++. ..+    .|. ++.....+.+.+.... .+++|++|++.|..                       
T Consensus       455 ~~~~~~~~~~~l~~~~~v~~v~~Dv-td~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g  532 (681)
T PRK08324        455 DEEAAEAAAAELGGPDRALGVACDV-TDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG  532 (681)
T ss_pred             CHHHHHHHHHHHhccCcEEEEEecC-CCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence            87766544 33443 111    122 2222333333333322 34799999999831                       


Q ss_pred             --HHHHHHHHhhcC---CceEEEEccc
Q 017793          268 --KTMSTALNATRP---GGKVCLIGLA  289 (366)
Q Consensus       268 --~~~~~~~~~l~~---~G~~v~~g~~  289 (366)
                        ...+.+++.+++   +|+++.++..
T Consensus       533 ~~~l~~~~~~~l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        533 HFLVAREAVRIMKAQGLGGSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence              123344555555   6889988753

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.54  E-value=0.00044  Score=58.85  Aligned_cols=107  Identities=20%  Similarity=0.276  Sum_probs=71.0

Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC-eEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTD  245 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~  245 (366)
                      .-..+++...+++|++||-+|+|. |..+.-+++..|.. .|++++..++-.+.+    .+++.+.+.....+   ....
T Consensus        60 ~~a~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd---g~~g  135 (209)
T PF01135_consen   60 MVARMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD---GSEG  135 (209)
T ss_dssp             HHHHHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES----GGGT
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc---hhhc
Confidence            334456777899999999999877 88899999988753 589999888754444    44666543222221   1111


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +     .....||.++-+.+.+......++.|++||+++..
T Consensus       136 ~-----~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  136 W-----PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             T-----GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             c-----ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            1     11357999999888877778889999999999874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.49  E-value=0.0032  Score=55.56  Aligned_cols=104  Identities=19%  Similarity=0.363  Sum_probs=73.1

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +++.+++||++||=+|||- |-+++..|+..|+ .|++++.|++..+.+++    .|.. .+-....+       .+.+ 
T Consensus        65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d-------~rd~-  134 (283)
T COG2230          65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD-------YRDF-  134 (283)
T ss_pred             HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-------cccc-
Confidence            3679999999999999987 8889999999999 79999999987776654    5554 21111111       1112 


Q ss_pred             HhhCCCCcEE-----EEcCCC---hHHHHHHHHhhcCCceEEEEcccCCC
Q 017793          251 NAMGSGIDVS-----FDCVGF---DKTMSTALNATRPGGKVCLIGLAKTE  292 (366)
Q Consensus       251 ~~~~~~~d~v-----ld~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~  292 (366)
                         ...||-|     |+.+|.   ++-+..+.+.|+++|++.+.......
T Consensus       135 ---~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~  181 (283)
T COG2230         135 ---EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPD  181 (283)
T ss_pred             ---ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCC
Confidence               2236665     445554   34677788899999999887655543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.48  E-value=0.0013  Score=58.97  Aligned_cols=99  Identities=15%  Similarity=0.187  Sum_probs=70.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+++|+|.|.+|.+++..++..|+ +|.+.++++++.+.+.++|...+ .       + ..+.+.    -..+|+|+.
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~----l~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEK----VAEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHH----hccCCEEEE
Confidence            47899999999999999999999998 78888888887776666665321 1       1 112222    247999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCcee
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV  295 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  295 (366)
                      +++..-.-...++.++++..++.++..+...++
T Consensus       216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf  248 (287)
T TIGR02853       216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF  248 (287)
T ss_pred             CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH
Confidence            997542224466778888888888765554443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.47  E-value=0.0036  Score=48.27  Aligned_cols=102  Identities=20%  Similarity=0.289  Sum_probs=68.6

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....+++++++|-+|+|. |..+..+++..+...+++++.++...+.+++    ++...+.....+...   .+...   
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~---   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE---ALEDS---   85 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc---cChhh---
Confidence            445677788999999987 8899999998755589999999987776543    444332211111111   01111   


Q ss_pred             hCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ...+|.|+...+.   ...++.+.+.|+++|.++..
T Consensus        86 -~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        86 -LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             -cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence             3579999876533   23678899999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=97.42  E-value=0.0006  Score=61.03  Aligned_cols=130  Identities=22%  Similarity=0.406  Sum_probs=77.3

Q ss_pred             cCCceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017793          147 PAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  226 (366)
Q Consensus       147 ~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  226 (366)
                      +....+.+.+.+.+-..--. +...+...++.. .++|++||=+|+|. |+++|.-++ +|+.+|++++.++...+.+++
T Consensus       127 ~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~  202 (295)
T PF06325_consen  127 PDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARE  202 (295)
T ss_dssp             TTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHH
T ss_pred             CCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHH
Confidence            34456666666655444211 222233444444 67889999999766 777776666 599899999999987666554


Q ss_pred             ----cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChH---HHHHHHHhhcCCceEEEEcccCC
Q 017793          227 ----LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK---TMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       227 ----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                          .+...-+..... .+.          ....||+|+.++-..-   ......++|+++|.+++.|....
T Consensus       203 N~~~N~~~~~~~v~~~-~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~  263 (295)
T PF06325_consen  203 NAELNGVEDRIEVSLS-EDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE  263 (295)
T ss_dssp             HHHHTT-TTCEEESCT-SCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred             HHHHcCCCeeEEEEEe-ccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence                333222211111 111          1367999999887553   34445667899999999886554

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.42  E-value=0.0012  Score=62.56  Aligned_cols=92  Identities=21%  Similarity=0.276  Sum_probs=70.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .-.|.+++|+|.|.+|...++.++..|+ +|++++.++.+...+...|+...        ++    .++.    ..+|+|
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~--------~l----eell----~~ADIV  313 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV--------TL----EDVV----ETADIF  313 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec--------cH----HHHH----hcCCEE
Confidence            3478999999999999999999999999 78888887776655555565321        12    2222    368999


Q ss_pred             EEcCCChHHHH-HHHHhhcCCceEEEEccc
Q 017793          261 FDCVGFDKTMS-TALNATRPGGKVCLIGLA  289 (366)
Q Consensus       261 ld~~g~~~~~~-~~~~~l~~~G~~v~~g~~  289 (366)
                      +.+.|+...++ ..+..|++++.++.+|..
T Consensus       314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        314 VTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             EECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence            99999876664 788999999999988755

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=97.38  E-value=0.0043  Score=53.34  Aligned_cols=104  Identities=15%  Similarity=0.177  Sum_probs=69.2

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      ..++...++++++||-+|+|. |..++.+++..+. ..|++++.+++-.+.++    +++.+.+.....+   .....  
T Consensus        68 ~~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d---~~~~~--  141 (215)
T TIGR00080        68 MMTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD---GTQGW--  141 (215)
T ss_pred             HHHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC---cccCC--
Confidence            344566789999999999876 7777888887653 35999999988776654    3454433222111   11111  


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                       .  ....||+|+-+...........+.|+++|+++..
T Consensus       142 -~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       142 -E--PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             -c--ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence             0  1357999886554455666788999999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK14967 putative methyltransferase; Provisional

Probab=97.29  E-value=0.0058  Score=52.84  Aligned_cols=99  Identities=24%  Similarity=0.332  Sum_probs=65.8

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +....++++++||-.|+|. |..++.+++. +..++++++.+++..+.+++    .+... ..+.   .++...   +  
T Consensus        29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~-~~~~---~d~~~~---~--   97 (223)
T PRK14967         29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDV-DVRR---GDWARA---V--   97 (223)
T ss_pred             HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCee-EEEE---Cchhhh---c--
Confidence            4555678899999999987 8888888875 65589999999987776554    33321 1111   222221   1  


Q ss_pred             hhCCCCcEEEEcCCC---------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFDCVGF---------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ....||+|+...+-                           ...+..+.+.|+++|+++.+
T Consensus        98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             13579999875320                           11345677899999998865

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.27  E-value=0.0084  Score=51.08  Aligned_cols=103  Identities=15%  Similarity=0.195  Sum_probs=68.7

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce-eeecCCCCcchHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADE-TAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~~~~  248 (366)
                      .++...++++++||-+|+|. |..+..+++..+ ...|++++.+++-.+.++    +++... +.....+   ..+.+. 
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d---~~~~~~-  138 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD---GKRGLE-  138 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC---cccCCc-
Confidence            34566788999999999876 888888888764 237999999988666554    344321 2111111   111110 


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                          ....||.|+-+...........+.|++||+++..
T Consensus       139 ----~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 ----KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             ----cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence                1357999987766555667788999999998764

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.23  E-value=0.0019  Score=51.07  Aligned_cols=73  Identities=19%  Similarity=0.294  Sum_probs=52.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc--eeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.++||+|+|++|.+++..+...|++.+..+.++.+|.+.+ ++++..  ..+.+.    ++.    +.    -..+|+
T Consensus        11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~----~~----~~~~Di   78 (135)
T PF01488_consen   11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLE----EA----LQEADI   78 (135)
T ss_dssp             TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHC----HH----HHTESE
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHH----HH----HhhCCe
Confidence            588999999999999999999999998899998998876644 556332  223321    121    11    136999


Q ss_pred             EEEcCCCh
Q 017793          260 SFDCVGFD  267 (366)
Q Consensus       260 vld~~g~~  267 (366)
                      ++.|.+.+
T Consensus        79 vI~aT~~~   86 (135)
T PF01488_consen   79 VINATPSG   86 (135)
T ss_dssp             EEE-SSTT
T ss_pred             EEEecCCC
Confidence            99998865

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.23  E-value=0.0015  Score=49.61  Aligned_cols=93  Identities=25%  Similarity=0.398  Sum_probs=63.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHc----CC-ceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNL----GA-DETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      |+.+||-+|+|. |..++.+++. .++ ++++++.+++..+.+++.    +. +.+.....   ++ .    .......+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~---d~-~----~~~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG---DA-E----FDPDFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES---CC-H----GGTTTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC---cc-c----cCcccCCC
Confidence            688999999887 8888888884 566 899999999988877653    22 22222212   22 1    11112457


Q ss_pred             CcEEEEcC-CC---h------HHHHHHHHhhcCCceEEE
Q 017793          257 IDVSFDCV-GF---D------KTMSTALNATRPGGKVCL  285 (366)
Q Consensus       257 ~d~vld~~-g~---~------~~~~~~~~~l~~~G~~v~  285 (366)
                      ||+|+... ..   .      ..++.+.+.|+|+|+++.
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            99999877 21   1      237788899999999875

...

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.21  E-value=0.0083  Score=51.44  Aligned_cols=80  Identities=26%  Similarity=0.358  Sum_probs=56.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCc----eeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGAD----ETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +..++|.| ++++|.+..+.+...|+ +++.+.+.+++++. +.+++..    ...|. ++.....+.+..+.+ .-+.+
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~-~~g~i   82 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPE-EFGRI   82 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHH-hhCcc
Confidence            46788999 58999999999999999 78888899998874 4567732    22332 333444455555443 23579


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+.+++.|.
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999999875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.16  E-value=0.0081  Score=50.16  Aligned_cols=113  Identities=17%  Similarity=0.243  Sum_probs=74.9

Q ss_pred             CCCEEEEECC--CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCcee-eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADET-AKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ....|||.||  |++|.+...-....|+ .|+++.++-++...+. ++|.... +|. ++.++..+...++.....++.|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence            3567899973  8999988877777899 8999988888887665 7775432 333 3444555555555554567899


Q ss_pred             EEEEcCCCh----------HH--------------HHH--HHHhhcCCceEEEEcccCCCceeec
Q 017793          259 VSFDCVGFD----------KT--------------MST--ALNATRPGGKVCLIGLAKTEMTVAL  297 (366)
Q Consensus       259 ~vld~~g~~----------~~--------------~~~--~~~~l~~~G~~v~~g~~~~~~~~~~  297 (366)
                      +.++..|.+          +.              +..  .....+.-|+++.+|....-.+++.
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf  148 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF  148 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch
Confidence            999988764          11              111  1223477899999886654444443

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.15  E-value=0.0015  Score=58.11  Aligned_cols=99  Identities=21%  Similarity=0.402  Sum_probs=61.0

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ++++++++|++||-+|||- |-+++.+|+..|+ .|.+++.+++..++++    +.|....+.+..  .++.    ++  
T Consensus        55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~~----~~--  124 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDYR----DL--  124 (273)
T ss_dssp             HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-GG----G---
T ss_pred             HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eecc----cc--
Confidence            4678999999999999884 7788899998899 7999999998877765    355332111111  1221    12  


Q ss_pred             hhCCCCcEEE-----EcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSF-----DCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vl-----d~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                        ...||.|+     +.+|.   +..+..+.+.|+|+|++++-
T Consensus       125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence              23788874     35543   24578888999999998764

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.10  E-value=0.016  Score=50.31  Aligned_cols=105  Identities=19%  Similarity=0.201  Sum_probs=64.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcC---CceeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG---ADETAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .++++||.| +|.+|..+++.+...|+ .|+.+++++++.+.+ +++.   ....+..+ .+.......+++.... -++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            467999998 69999999999999999 677777877766544 3332   11222111 1122333333332221 246


Q ss_pred             CcEEEEcCCCh-----------------------HHHHHHHHhhcCCceEEEEccc
Q 017793          257 IDVSFDCVGFD-----------------------KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       257 ~d~vld~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +|.++.+.+..                       ...+..+.++.++|+++.++..
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            89999988742                       1134455566778888888754

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.09  E-value=0.0059  Score=57.19  Aligned_cols=99  Identities=18%  Similarity=0.288  Sum_probs=69.9

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +...++++++||.+|+|. |..++.+++..|+ .|++++.+++..+.+++......+.+..  .++    ..+    .+.
T Consensus       161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l----~~~  228 (383)
T PRK11705        161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL----NGQ  228 (383)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc----CCC
Confidence            567889999999999864 7788899998888 7999999999999887754221111111  121    111    356


Q ss_pred             CcEEEE-----cCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793          257 IDVSFD-----CVGF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       257 ~d~vld-----~~g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +|.|+.     .+|.   ...+..+.+.|+|+|.++...
T Consensus       229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            998864     3333   246778888999999988754

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.99  E-value=0.0089  Score=50.02  Aligned_cols=96  Identities=19%  Similarity=0.268  Sum_probs=64.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++++.+||-+|||. |..++.+++......|++++.+++..+.+++    .+.+.+.....   +..    ++..  ...
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~~--~~~  112 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFGQ--EEK  112 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCCC--CCC
Confidence            55689999999876 7777777776544489999999987766543    45443222212   111    1111  357


Q ss_pred             CcEEEEcCCC--hHHHHHHHHhhcCCceEEEE
Q 017793          257 IDVSFDCVGF--DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       257 ~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +|+|+.....  +..+..+.+.|+++|+++.+
T Consensus       113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~  144 (187)
T PRK00107        113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLAL  144 (187)
T ss_pred             ccEEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence            9999874332  35677888999999999876

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0072  Score=54.06  Aligned_cols=82  Identities=18%  Similarity=0.251  Sum_probs=55.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.++||.| +|++|...++.+...|+ .|+++++++++.+.+.+.+...+ .|+ ++..++...+.++.+..++.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDY-AEPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccC-CCHHHHHHHHHHHHHHcCCCccEE
Confidence            356899998 59999998888888898 68888888887776666554432 232 222333344444433234579999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +.+.|.
T Consensus        81 i~~Ag~   86 (277)
T PRK05993         81 FNNGAY   86 (277)
T ss_pred             EECCCc
Confidence            998763

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.98  E-value=0.012  Score=48.88  Aligned_cols=88  Identities=22%  Similarity=0.272  Sum_probs=59.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...+++++..|+ +|++.+++.+........+...        .++.+    +.    ...|+|+.
T Consensus        35 ~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~e----ll----~~aDiv~~   97 (178)
T PF02826_consen   35 RGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDE----LL----AQADIVSL   97 (178)
T ss_dssp             TTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHH----HH----HH-SEEEE
T ss_pred             CCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhh----hc----chhhhhhh
Confidence            58999999999999999999999999 8999988887766445555421        12222    22    24789988


Q ss_pred             cCCChH-----HHHHHHHhhcCCceEEEEc
Q 017793          263 CVGFDK-----TMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~~~-----~~~~~~~~l~~~G~~v~~g  287 (366)
                      +.+...     .-...+..|+++..++-++
T Consensus        98 ~~plt~~T~~li~~~~l~~mk~ga~lvN~a  127 (178)
T PF02826_consen   98 HLPLTPETRGLINAEFLAKMKPGAVLVNVA  127 (178)
T ss_dssp             -SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred             hhccccccceeeeeeeeeccccceEEEecc
Confidence            776321     1224567788888776654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.91  E-value=0.019  Score=48.22  Aligned_cols=100  Identities=19%  Similarity=0.291  Sum_probs=59.6

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ..++++++||.+|+|.-+ .+..+++.. +..++++++.+++.    +..+.. .+..+.........+.+..  ...++
T Consensus        28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~--~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERV--GDDKV   99 (188)
T ss_pred             cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHh--CCCCc
Confidence            567899999999988744 455555543 44479999998864    112332 1211111122222222221  24579


Q ss_pred             cEEEEcC-----CC------------hHHHHHHHHhhcCCceEEEE
Q 017793          258 DVSFDCV-----GF------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~vld~~-----g~------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+|+...     |.            ...+..+.+.|+++|+++..
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~  145 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVK  145 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence            9999531     21            24677788999999998875

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.86  E-value=0.013  Score=54.29  Aligned_cols=97  Identities=15%  Similarity=0.216  Sum_probs=63.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+|||+|+|.+|+.+++.+...+...|.+.+++.++...+.+....  +.+.++.  .+.. .+.++.    .++|+||+
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~--~d~~-al~~li----~~~d~VIn   74 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDA--ADVD-ALVALI----KDFDLVIN   74 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecc--cChH-HHHHHH----hcCCEEEE
Confidence            4799999999999999998888855788888998888777665411  1222222  2222 233332    35699999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcc
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +.+..-....+-.+++.+=.++.+..
T Consensus        75 ~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          75 AAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             eCCchhhHHHHHHHHHhCCCEEEccc
Confidence            99976444444345555556666543

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.84  E-value=0.021  Score=49.38  Aligned_cols=107  Identities=21%  Similarity=0.406  Sum_probs=75.2

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeec-CCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKV-STDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~-~~~~~~~~~~~~~~~~  251 (366)
                      .....++|++||=.|+|. |-.|+.+++..|-..|+++|-+++-++.+++-    +... +.+ ..+.+++.        
T Consensus        45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP--------  114 (238)
T COG2226          45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLP--------  114 (238)
T ss_pred             HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCC--------
Confidence            345566899999988766 89999999999866899999999988877652    2221 111 11111111        


Q ss_pred             hhCCCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEcccCCCc
Q 017793          252 AMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAKTEM  293 (366)
Q Consensus       252 ~~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~~  293 (366)
                      .....||+|..+.|-      +..+.+..+.|+|+|+++.+....+..
T Consensus       115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~  162 (238)
T COG2226         115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN  162 (238)
T ss_pred             CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence            125679999776654      247888999999999999987666543

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.79  E-value=0.032  Score=47.10  Aligned_cols=104  Identities=13%  Similarity=0.280  Sum_probs=64.1

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +....++++++||=.|+|. |..++.+++......+++++.+++..+.+++    ++.+.+.....   +....+..+  
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~--  106 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---SAPECLAQL--  106 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---chHHHHhhC--
Confidence            3456678899988888765 6667777776543489999999988776654    55543322222   222222111  


Q ss_pred             hhCCCCcE-EEEcCCC-hHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDV-SFDCVGF-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~-vld~~g~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ...+|. .++.... ...+..+.+.|+++|+++...
T Consensus       107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence              122344 4443222 356788889999999988763

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.79  E-value=0.043  Score=48.25  Aligned_cols=85  Identities=19%  Similarity=0.201  Sum_probs=53.6

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC----Cc-eeeecCCCCcchHHHHHHHHHhhC
Q 017793          182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLG----AD-ETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg----~~-~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ..+.++||.| ++++|......+...|. .++.+.++++|++.+. ++.    .. .++..+=..++-...+.......+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            4578999999 58999887777777898 6777889999887553 332    21 122221112222233332222234


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      ..+|+.+++.|..
T Consensus        83 ~~IdvLVNNAG~g   95 (265)
T COG0300          83 GPIDVLVNNAGFG   95 (265)
T ss_pred             CcccEEEECCCcC
Confidence            5799999999875

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.73  E-value=0.036  Score=47.86  Aligned_cols=104  Identities=23%  Similarity=0.380  Sum_probs=73.3

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .+.+.++.||++|+=.|+|+ |.++.-||+..|- .+++..+..++..+.+++    +|....+.+..  .|..+..   
T Consensus        86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~Dv~~~~---  159 (256)
T COG2519          86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GDVREGI---  159 (256)
T ss_pred             HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--ccccccc---
Confidence            34668899999999999876 8889999998875 689999999988777654    45444222111  2222211   


Q ss_pred             HHhhCCCCcEEE-EcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          250 QNAMGSGIDVSF-DCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       250 ~~~~~~~~d~vl-d~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                         -+..+|.++ |--.....++.+.+.|++||.++.+.
T Consensus       160 ---~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         160 ---DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             ---cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence               134788875 54444567889999999999998874

>PRK12742 oxidoreductase; Provisional

Probab=96.72  E-value=0.033  Score=48.34  Aligned_cols=101  Identities=21%  Similarity=0.304  Sum_probs=59.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.++||.| +|++|...++.+...|+ .++.+ .+++++.+ +..+++...+ ..+-  .+..+ +.+.... .+++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~-~~D~--~~~~~-~~~~~~~-~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAV-QTDS--ADRDA-VIDVVRK-SGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEE-ecCC--CCHHH-HHHHHHH-hCCCcE
Confidence            367899998 69999999988888899 45554 33444443 3345554322 2111  22222 2222221 246999


Q ss_pred             EEEcCCChH-------------------------HHHHHHHhhcCCceEEEEccc
Q 017793          260 SFDCVGFDK-------------------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       260 vld~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      ++++.|...                         ........+..+|+++.++..
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  133 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV  133 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence            999987520                         112334456677898887643

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.71  E-value=0.0067  Score=53.58  Aligned_cols=97  Identities=18%  Similarity=0.322  Sum_probs=71.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +..+|.|+|.|-+|.-|..+|--+|+ .|...+.+.+|+..++.+-..++..+.+...++.+.+        .++|++|.
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIg  237 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIG  237 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEE
Confidence            34568888999999999999999999 6888899999999988765555433323222332222        46899998


Q ss_pred             cCCCh------HHHHHHHHhhcCCceEEEEcc
Q 017793          263 CVGFD------KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~------~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ++-.+      -..++.++.|+||+.++.+..
T Consensus       238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             EEEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence            76332      256677899999999998864

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.71  E-value=0.022  Score=48.75  Aligned_cols=95  Identities=21%  Similarity=0.299  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee--eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      -+|-+||=.|||+ |+++.-+|+ .|+ .|.++|-+++..+.++.-.....  ++|..      ..+.++.. .++.||+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~-~~~~FDv  127 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLAS-AGGQFDV  127 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHh-cCCCccE
Confidence            3788999999887 888888887 588 89999999999998875332222  33432      22333433 2478999


Q ss_pred             EEE-----cCCChH-HHHHHHHhhcCCceEEEE
Q 017793          260 SFD-----CVGFDK-TMSTALNATRPGGKVCLI  286 (366)
Q Consensus       260 vld-----~~g~~~-~~~~~~~~l~~~G~~v~~  286 (366)
                      |++     .+..++ .+..+.+.++|+|.++.-
T Consensus       128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         128 VTCMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             EEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            965     555543 566788889999987654

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.69  E-value=0.0047  Score=50.80  Aligned_cols=100  Identities=19%  Similarity=0.310  Sum_probs=65.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeee-cCCC--------------CcchHHHHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK-VSTD--------------IEDVDTDVG  247 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~-~~~~--------------~~~~~~~~~  247 (366)
                      ++-+|+|.|+|.+|..|+.+++.+|+ .++..+...++.+..+.+++..+.. +...              .......+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            34789999999999999999999999 7888889988888888887755433 1111              122222333


Q ss_pred             HHHHhhCCCCcEEEEcCCCh------HHHHHHHHhhcCCceEEEEc
Q 017793          248 KIQNAMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +..    ..+|++|.+.-.+      -.....++.|+++..++.+.
T Consensus        98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis  139 (168)
T PF01262_consen   98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS  139 (168)
T ss_dssp             HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred             HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence            222    3579988543211      12345668889888888875

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=96.68  E-value=0.05  Score=46.55  Aligned_cols=101  Identities=15%  Similarity=0.118  Sum_probs=64.8

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      .+...+++++++||-.|+|. |..+..+++.. . .+++++.+++..+.+++    ++.+.+.....+   ....+   .
T Consensus        70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~---~  140 (212)
T PRK00312         70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD---GWKGW---P  140 (212)
T ss_pred             HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC---cccCC---C
Confidence            34567788999999999765 65666666654 3 79999998877665543    444332111111   11111   0


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                        ..+.||+|+.............+.|+++|+++..
T Consensus       141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence              1257999987655555667788999999998764

>PRK01581 speE spermidine synthase; Validated

Probab=96.54  E-value=0.039  Score=50.65  Aligned_cols=100  Identities=17%  Similarity=0.106  Sum_probs=66.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-----------CceeeecCCCCcchHHHHHHH
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-----------ADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----------~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .....+|||+|+|. |.++..+++..+..+|.+++.+++-.+.++++.           .+.+-...   .|....++. 
T Consensus       148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi---~Da~~fL~~-  222 (374)
T PRK01581        148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV---CDAKEFLSS-  222 (374)
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE---CcHHHHHHh-
Confidence            34457999999764 667788888766678999999999999988631           11111111   233333322 


Q ss_pred             HHhhCCCCcEEEEcCCC-----------hHHHHHHHHhhcCCceEEEEcc
Q 017793          250 QNAMGSGIDVSFDCVGF-----------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~-----------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                         ....+|+||--...           .+.+..+.+.|+++|.++....
T Consensus       223 ---~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        223 ---PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             ---cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence               25679999765422           2356778889999999887643

>PRK08017 oxidoreductase; Provisional

Probab=96.52  E-value=0.023  Score=49.99  Aligned_cols=80  Identities=23%  Similarity=0.326  Sum_probs=53.2

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .++||.| +|.+|...++.+...|+ .|+++.++.++.+.+++.++..+ .|+ .+..+....+..+....++.+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDL-DDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeec-CCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            4799999 59999999999988898 68888888888877777775432 222 22222233333332222357888888


Q ss_pred             cCCC
Q 017793          263 CVGF  266 (366)
Q Consensus       263 ~~g~  266 (366)
                      +.|.
T Consensus        81 ~ag~   84 (256)
T PRK08017         81 NAGF   84 (256)
T ss_pred             CCCC
Confidence            8763

>PRK08317 hypothetical protein; Provisional

Probab=96.52  E-value=0.035  Score=48.16  Aligned_cols=103  Identities=21%  Similarity=0.303  Sum_probs=68.9

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcC---CceeeecCCCCcchHHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ++...++++++||.+|+|. |..+..+++..+ ...+++++.+++..+.+++..   ...+.....+..++.     +  
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~--   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-----F--   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-----C--
Confidence            3567788999999999877 889999998874 347999999999888877651   111111111111110     1  


Q ss_pred             hhCCCCcEEEEcC-----CC-hHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                       ....+|+|+...     .. ...+..+.++|+++|.++...
T Consensus        84 -~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         84 -PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             -CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence             135689887532     22 346778889999999998764

>PRK04457 spermidine synthase; Provisional

Probab=96.52  E-value=0.037  Score=49.05  Aligned_cols=96  Identities=16%  Similarity=0.200  Sum_probs=66.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC----ceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GA----DETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .++.+||++|+|+ |..+..+++.....++.+++.+++-.+.+++. +.    +.+....   .|..+.+..    ....
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~---~Da~~~l~~----~~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE---ADGAEYIAV----HRHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE---CCHHHHHHh----CCCC
Confidence            4567899999876 88888888887655899999999999988774 32    1121111   233333332    2457


Q ss_pred             CcEEE-EcCC---------ChHHHHHHHHhhcCCceEEE
Q 017793          257 IDVSF-DCVG---------FDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       257 ~d~vl-d~~g---------~~~~~~~~~~~l~~~G~~v~  285 (366)
                      +|+|+ |...         ..+.+..+.+.|+++|.++.
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            99996 3321         13678888999999999886

>PRK04148 hypothetical protein; Provisional

Probab=96.51  E-value=0.045  Score=42.74  Aligned_cols=91  Identities=12%  Similarity=0.146  Sum_probs=63.8

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ..-+++.+++++|+| .|....+.+...|. .|+++|.+++..+.+++.+.+.+.+--. ++++    . +    =.++|
T Consensus        12 ~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~----~-~----y~~a~   79 (134)
T PRK04148         12 YEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL----E-I----YKNAK   79 (134)
T ss_pred             cccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH----H-H----HhcCC
Confidence            333456889999998 78744445556798 8999999999999999888655433111 1221    1 1    25799


Q ss_pred             EEEEcCCChHHHHHHHHhhcCCc
Q 017793          259 VSFDCVGFDKTMSTALNATRPGG  281 (366)
Q Consensus       259 ~vld~~g~~~~~~~~~~~l~~~G  281 (366)
                      +++..-..++....+++.-++-|
T Consensus        80 liysirpp~el~~~~~~la~~~~  102 (134)
T PRK04148         80 LIYSIRPPRDLQPFILELAKKIN  102 (134)
T ss_pred             EEEEeCCCHHHHHHHHHHHHHcC
Confidence            99999998888777777765444

>PRK00811 spermidine synthase; Provisional

Probab=96.50  E-value=0.02  Score=51.35  Aligned_cols=98  Identities=16%  Similarity=0.143  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------c-eeeecCCCCcchHHHHHHHHHh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------D-ETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~-~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      +.+++||++|+|. |..+..+++..+..+|.+++.+++-.+.++++-.        + .+..+.   .+....++.    
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~---~Da~~~l~~----  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI---GDGIKFVAE----  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE---CchHHHHhh----
Confidence            4568999999876 7778888887777789999999998888876321        1 111111   233333322    


Q ss_pred             hCCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..+.+|+|+-....          .+.+..+.+.|+++|.++...
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            25679999764321          234567789999999988753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.50  E-value=0.057  Score=52.00  Aligned_cols=81  Identities=16%  Similarity=0.262  Sum_probs=49.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh--hH-HHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QR-LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~--~~-~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ++.++||.| +|++|...++.+...|+ +++.+++++  +. .+..++++...+ .|. ++.......+..+.+ ..+++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~-~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDI-TAPDAPARIAEHLAE-RHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeC-CCHHHHHHHHHHHHH-hCCCC
Confidence            478899998 59999999998888899 577666532  22 233344554322 232 222223333333322 23479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |++|.+.|.
T Consensus       286 d~vi~~AG~  294 (450)
T PRK08261        286 DIVVHNAGI  294 (450)
T ss_pred             CEEEECCCc
Confidence            999999883

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.46  E-value=0.074  Score=47.21  Aligned_cols=109  Identities=24%  Similarity=0.266  Sum_probs=63.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCce-eeecC---CCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADE-TAKVS---TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~-~~~~~---~~~~~~~~~~~~~~~~~  253 (366)
                      .+..|+|.| ++++|.+.+.-.-..|+..+.++ +..++.+    .+++.+... ++.+.   ++.++..+.+.++.. .
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lva-r~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~-~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVA-RRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR-H   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEee-hhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH-h
Confidence            467889999 58999664444444688544444 5555444    445555444 33222   223333334333322 3


Q ss_pred             CCCCcEEEEcCCCh-------------------------HHHHHHHHhhcCC--ceEEEEcccCCCc
Q 017793          254 GSGIDVSFDCVGFD-------------------------KTMSTALNATRPG--GKVCLIGLAKTEM  293 (366)
Q Consensus       254 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~  293 (366)
                      -+++|+.+++.|-.                         .....++.+|++.  |+++.++...+..
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~  155 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM  155 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc
Confidence            56899999988754                         1334456666444  9999987655433

>PRK00536 speE spermidine synthase; Provisional

Probab=96.42  E-value=0.017  Score=50.87  Aligned_cols=101  Identities=6%  Similarity=-0.143  Sum_probs=67.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE-
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS-  260 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v-  260 (366)
                      ....+|||+|+|- |-++-.++|.-  ++|..++-+++-.++++++-......++...-.+...   ..+...+.+|+| 
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~---~~~~~~~~fDVII  144 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQ---LLDLDIKKYDLII  144 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeeh---hhhccCCcCCEEE
Confidence            5569999999876 67888999985  3899999999988888883221000011111111111   222123579998 


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +|+.-+++....+.++|+++|.++.-+.
T Consensus       145 vDs~~~~~fy~~~~~~L~~~Gi~v~Qs~  172 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKEDGVFISVAK  172 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence            4556667778889999999999988654

>PRK06182 short chain dehydrogenase; Validated

Probab=96.38  E-value=0.034  Score=49.52  Aligned_cols=81  Identities=23%  Similarity=0.280  Sum_probs=53.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ++.+++|.| +|.+|...++.+...|. .|+++++++++.+.+.+.+...+ .|. ++..++...+.++.+ ..+++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~-~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDV-TDEASIKAAVDTIIA-EEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEE
Confidence            357899998 69999999988888898 68888788877665544443322 232 233344444444433 23579999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +++.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999874

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.096  Score=45.30  Aligned_cols=81  Identities=20%  Similarity=0.171  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHH---HcCCcee-eecCCCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IAR---NLGADET-AKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~---~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++.++||.| +|.+|...++.+...|+ +|+.++++.++.+ .+.   ..+...+ .|. .+..++...+.++.+. -++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDL-VDPQAARRAVDEVNRQ-FGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeec-CCHHHHHHHHHHHHHH-hCC
Confidence            367899998 69999998888888899 5788877665432 222   2333221 122 1222333333333321 247


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            9999998774

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.04  Score=49.06  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=52.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .++||.| +|++|...++.+...|+ .|+++++++++.+.+.+.+...+ .|+ ++...+.+.+..+.+ ..+++|++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~-~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEA-EHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEEEE
Confidence            3689998 69999999988888898 68888888777766655554332 233 222333333333322 2357999999


Q ss_pred             cCCC
Q 017793          263 CVGF  266 (366)
Q Consensus       263 ~~g~  266 (366)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9983

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.24  E-value=0.083  Score=45.22  Aligned_cols=98  Identities=17%  Similarity=0.188  Sum_probs=63.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce---------------eeecCCCCcchHH
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE---------------TAKVSTDIEDVDT  244 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~---------------~~~~~~~~~~~~~  244 (366)
                      ..++.+||+.|||. |.-++-+|. .|. .|++++.++.-.+.+ ++.+...               +-.+..   |+.+
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---D~~~  105 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG---DFFA  105 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc---cCCC
Confidence            36778999999987 888888886 598 799999999887764 3333210               000001   1100


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEEcc
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                          +.......||.++|+..-        ...++.+.+.|+|+|+++++..
T Consensus       106 ----~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       106 ----LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             ----CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence                100012468999996531        2356788899999998776653

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.23  E-value=0.018  Score=50.30  Aligned_cols=108  Identities=27%  Similarity=0.430  Sum_probs=66.5

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .+...+++||++|+=.|+|+ |.++..+++..| -.+|+..+.++++.+.+++    +|.+..+....  .|..+.-  .
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g--~  106 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG--F  106 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG----
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--c
Confidence            34668899999999998766 778888888776 3489999999998877754    56543222111  1221110  0


Q ss_pred             HHhhCCCCcEEE-EcCCChHHHHHHHHhh-cCCceEEEEc
Q 017793          250 QNAMGSGIDVSF-DCVGFDKTMSTALNAT-RPGGKVCLIG  287 (366)
Q Consensus       250 ~~~~~~~~d~vl-d~~g~~~~~~~~~~~l-~~~G~~v~~g  287 (366)
                      .+.....+|.|| |--.....+..+.+.| ++||+++.+.
T Consensus       107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs  146 (247)
T PF08704_consen  107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS  146 (247)
T ss_dssp             STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred             cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence            000135688885 5444345788999999 8999999885

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.22  E-value=0.041  Score=45.87  Aligned_cols=82  Identities=21%  Similarity=0.332  Sum_probs=54.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc---eeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD---ETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .|.+|||.| ++++|+...+-...+|= .||.+.+++++++.+++...+   .+.|. .+.....+.+.++.+.. ...|
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv-~d~~~~~~lvewLkk~~-P~lN   80 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDV-ADRDSRRELVEWLKKEY-PNLN   80 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecc-cchhhHHHHHHHHHhhC-Cchh
Confidence            478999997 78999988887777886 788888999999988875432   23333 22223333333333322 3478


Q ss_pred             EEEEcCCCh
Q 017793          259 VSFDCVGFD  267 (366)
Q Consensus       259 ~vld~~g~~  267 (366)
                      +++++.|-.
T Consensus        81 vliNNAGIq   89 (245)
T COG3967          81 VLINNAGIQ   89 (245)
T ss_pred             eeeeccccc
Confidence            998888753

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.22  E-value=0.098  Score=44.40  Aligned_cols=34  Identities=32%  Similarity=0.536  Sum_probs=30.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|+|.|+|++|..+++.+...|+..+..+|.+
T Consensus        21 ~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        21 NSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            5789999999999999999999999889988866

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.21  E-value=0.044  Score=45.44  Aligned_cols=91  Identities=14%  Similarity=0.190  Sum_probs=58.2

Q ss_pred             EEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          187 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       187 vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      |+|.| +|.+|...++.+...|. .|.++.+++++.+.  ..+... +..+-  .+. ..+.+..    .++|.||.++|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d~--~d~-~~~~~al----~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGDL--FDP-DSVKAAL----KGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESCT--TCH-HHHHHHH----TTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceeee--hhh-hhhhhhh----hhcchhhhhhh
Confidence            68999 59999999999999997 78888788887665  333332 22211  222 2233322    37999999998


Q ss_pred             C----hHHHHHHHHhhcCCc--eEEEEcc
Q 017793          266 F----DKTMSTALNATRPGG--KVCLIGL  288 (366)
Q Consensus       266 ~----~~~~~~~~~~l~~~G--~~v~~g~  288 (366)
                      .    .......++.++..|  +++.++.
T Consensus        70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~   98 (183)
T PF13460_consen   70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSS   98 (183)
T ss_dssp             STTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred             hhcccccccccccccccccccccceeeec
Confidence            4    223445555554433  6776654

...

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=96.19  E-value=0.18  Score=44.77  Aligned_cols=99  Identities=20%  Similarity=0.274  Sum_probs=62.8

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ...++|++||=.|||+ |..++.++..++ ...|++++.++++.+.++    .+|.+.+.....+..++    ..    .
T Consensus        67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~----~~----~  137 (264)
T TIGR00446        67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVF----GA----A  137 (264)
T ss_pred             hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHh----hh----h
Confidence            4578999998888766 656666676653 237999999999887664    45655433222221111    11    1


Q ss_pred             CCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...||.|+-   |.|.                         ...+..+++.|+++|+++..
T Consensus       138 ~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs  198 (264)
T TIGR00446       138 VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS  198 (264)
T ss_pred             ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            235999964   3442                         12566778889999998754

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.18  E-value=0.087  Score=51.53  Aligned_cols=46  Identities=20%  Similarity=0.256  Sum_probs=37.1

Q ss_pred             HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793          177 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI  223 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~  223 (366)
                      +..+.+.|.++||.| +|.+|...++.+...|. .|+++.++.++.+.
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~  119 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES  119 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence            456778899999998 69999999888888898 67777777776543

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.17  E-value=0.076  Score=48.30  Aligned_cols=91  Identities=24%  Similarity=0.342  Sum_probs=60.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      .+|.|+|+|.+|....+.++..|. ..|++.++++++.+.+++.|......     .+..+    .    -..+|+|+.|
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~----~----~~~aDvViia   73 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAE----A----VKGADLVILC   73 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHH----H----hcCCCEEEEC
Confidence            579999999999998888887775 36888899998888888877532111     11111    1    1468999999


Q ss_pred             CCChHH---HHHHHHhhcCCceEEEEcc
Q 017793          264 VGFDKT---MSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       264 ~g~~~~---~~~~~~~l~~~G~~v~~g~  288 (366)
                      +.....   .......++++..++.++.
T Consensus        74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         74 VPVGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            986432   2233345566666666553

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.16  E-value=0.12  Score=47.33  Aligned_cols=100  Identities=12%  Similarity=0.141  Sum_probs=65.8

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHH-HHHCCCCeEEEEcCChhHHH-HHHHc----CCceeeecCCCCcchHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLA-ARAFGAPRIIITDVDVQRLS-IARNL----GADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~l-a~~~g~~~vv~v~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +...-+...+++|+|+|..|.+.+.. +...+++.|.+.++++++.+ +++++    +... ..+    .+..+.+    
T Consensus       120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~----~~~~~~~----  190 (325)
T PRK08618        120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVV----NSADEAI----  190 (325)
T ss_pred             HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEe----CCHHHHH----
Confidence            43333456789999999999776654 44568888999999888765 33333    3321 112    1222222    


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                          ...|+|+.|.+.. +.... +.+++|-++..+|...+
T Consensus       191 ----~~aDiVi~aT~s~-~p~i~-~~l~~G~hV~~iGs~~p  225 (325)
T PRK08618        191 ----EEADIIVTVTNAK-TPVFS-EKLKKGVHINAVGSFMP  225 (325)
T ss_pred             ----hcCCEEEEccCCC-CcchH-HhcCCCcEEEecCCCCc
Confidence                4689999999876 33334 88999999989986543

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.15  E-value=0.082  Score=44.67  Aligned_cols=98  Identities=16%  Similarity=0.237  Sum_probs=62.6

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      +.....++.+||-+|||. |..+..+++. |. .|++++.+++-.+.+++.    +...+....   .++.    +..  
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~---~d~~----~~~--   91 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTAV---VDLN----NLT--   91 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEEe---cChh----hCC--
Confidence            334456778999999887 8888888885 77 799999999876665542    222111100   1111    111  


Q ss_pred             hCCCCcEEEEcCC----C----hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCVG----F----DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~g----~----~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....||+|+.+..    .    ...+..+.+.|+++|.++.+
T Consensus        92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~  133 (197)
T PRK11207         92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV  133 (197)
T ss_pred             cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1346999987543    1    24566788889999996554

>PLN03075 nicotianamine synthase; Provisional

Probab=96.15  E-value=0.053  Score=48.49  Aligned_cols=98  Identities=24%  Similarity=0.270  Sum_probs=66.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcC-C----ceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLG-A----DETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg-~----~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .++++|+-+|+|+.+..++.+++... ..+++++|.+++..+.++++- .    ..-+.+..  .+..+    ... ..+
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~~-~l~  194 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VTE-SLK  194 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----ccc-ccC
Confidence            47899999999999999988887553 347999999999888887643 1    11122211  11111    110 125


Q ss_pred             CCcEEEEcC------CC-hHHHHHHHHhhcCCceEEEE
Q 017793          256 GIDVSFDCV------GF-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       256 ~~d~vld~~------g~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +||+||..+      .. ...+....+.|++||.++.=
T Consensus       195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr  232 (296)
T PLN03075        195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLR  232 (296)
T ss_pred             CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence            799998775      12 24678888999999998754

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=96.14  E-value=0.063  Score=47.87  Aligned_cols=97  Identities=18%  Similarity=0.220  Sum_probs=66.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCC----CcchHHHHHHHHHhhCCCCcE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTD----IEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+|||+|.|. |-++-.++|....+++++++-+++-.++++++-.... ...+..    ..|-.+.+++    ...++|+
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~----~~~~fDv  152 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRD----CEEKFDV  152 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHh----CCCcCCE
Confidence            5999998665 6678889998888899999999999998887421110 000010    1233333333    2458999


Q ss_pred             EE-EcCCC---------hHHHHHHHHhhcCCceEEEE
Q 017793          260 SF-DCVGF---------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       260 vl-d~~g~---------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +| |+...         ....+.+.++|+++|.++..
T Consensus       153 Ii~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q  189 (282)
T COG0421         153 IIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ  189 (282)
T ss_pred             EEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence            85 44433         35778899999999999887

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=96.14  E-value=0.12  Score=43.22  Aligned_cols=99  Identities=16%  Similarity=0.296  Sum_probs=64.7

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....+.++++||=+|+|. |..++.+++.....++++++.+++..+.+++    ++...+.....   +...   .    
T Consensus        25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~---~----   93 (187)
T PRK08287         25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI---E----   93 (187)
T ss_pred             HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh---h----
Confidence            445677889999899876 7777888876543489999999987766653    44333221111   1111   1    


Q ss_pred             hCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....+|+|+.....   ...+..+.+.|+++|+++..
T Consensus        94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            13469999864321   23567788999999998764

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.13  E-value=0.043  Score=53.38  Aligned_cols=73  Identities=26%  Similarity=0.381  Sum_probs=53.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +.++++|+|+|.|.+|++++++++..|+ .|++.+..+++.+.++++|.... .. .   .....   +     ..+|+|
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~-~---~~~~~---l-----~~~D~V   74 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-ST-S---DAVQQ---I-----ADYALV   74 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cC-c---chHhH---h-----hcCCEE
Confidence            5678999999999999999999999999 68888877666666677776332 11 1   11111   1     357999


Q ss_pred             EEcCCCh
Q 017793          261 FDCVGFD  267 (366)
Q Consensus       261 ld~~g~~  267 (366)
                      +.+.|.+
T Consensus        75 V~SpGi~   81 (488)
T PRK03369         75 VTSPGFR   81 (488)
T ss_pred             EECCCCC
Confidence            9988875

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=96.12  E-value=0.053  Score=45.15  Aligned_cols=93  Identities=19%  Similarity=0.270  Sum_probs=59.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +++||-+|||. |..++.+++.....+|++++.+++..+.++    +.+.+.+.....   +..+    +.  ....+|+
T Consensus        43 ~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~~~----~~--~~~~fD~  112 (181)
T TIGR00138        43 GKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RAED----FQ--HEEQFDV  112 (181)
T ss_pred             CCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---chhh----cc--ccCCccE
Confidence            78899899775 677777776554447999999998665554    355443222111   2111    11  1457999


Q ss_pred             EEEcCC--ChHHHHHHHHhhcCCceEEEE
Q 017793          260 SFDCVG--FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       260 vld~~g--~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+-..-  -+..++.+.+.|+++|+++..
T Consensus       113 I~s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       113 ITSRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             EEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            976531  134566778889999998865

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK04266 fibrillarin; Provisional

Probab=96.12  E-value=0.14  Score=44.31  Aligned_cols=104  Identities=11%  Similarity=0.159  Sum_probs=63.5

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhhC
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +...+++|++||=.|+|. |..+..+++..+...|++++.+++..+.+.+.-.  +.+..+..+..+. .....+    .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~-~~~~~l----~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKP-ERYAHV----V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCc-chhhhc----c
Confidence            457889999999998765 5567777877653479999999987664433211  1111111111110 000111    2


Q ss_pred             CCCcEEEEcCCChH----HHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+|+++.....+.    .+..+.+.|++||+++..
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            35999996554331    356788899999999873

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.15  Score=44.19  Aligned_cols=82  Identities=29%  Similarity=0.321  Sum_probs=49.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCC-ceeeec--C-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA-DETAKV--S-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~-~~~~~~--~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+++++++++.. ..+++.. ..+..+  + .+..++...++++.+. .++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            367899998 69999998888877898 5777777776554 3344431 111111  1 2223333334433322 247


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|++|.+.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998764

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=96.10  E-value=0.095  Score=45.42  Aligned_cols=103  Identities=21%  Similarity=0.262  Sum_probs=66.0

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ....++++++||=+|||. |..+..+++..+. ..+++++.+++..+.+++    .+.+.+.....+..++       . 
T Consensus        39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-------~-  109 (231)
T TIGR02752        39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMEL-------P-  109 (231)
T ss_pred             HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcC-------C-
Confidence            456778899999999876 7788888887642 379999999887766654    2332221111111111       0 


Q ss_pred             hhCCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEcc
Q 017793          252 AMGSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       252 ~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      .....+|+|+-+..     . ...+..+.+.|+++|+++....
T Consensus       110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            01357999975321     1 2356778899999999987643

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PLN02823 spermine synthase

Probab=96.10  E-value=0.075  Score=48.76  Aligned_cols=96  Identities=18%  Similarity=0.253  Sum_probs=63.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ...+|||+|+|. |..+..+++..+..++++++.+++-.++++++-.        +.+-.+.   .|....++.    ..
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~---~Da~~~L~~----~~  174 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELII---NDARAELEK----RD  174 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEE---ChhHHHHhh----CC
Confidence            457899999775 6667788887777789999999999999987532        1111111   232333322    35


Q ss_pred             CCCcEEEEcCC------------ChHHHH-HHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVG------------FDKTMS-TALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g------------~~~~~~-~~~~~l~~~G~~v~~  286 (366)
                      ..+|+||--..            +.+.+. .+.+.|+++|.++.-
T Consensus       175 ~~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q  219 (336)
T PLN02823        175 EKFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ  219 (336)
T ss_pred             CCccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence            67999964321            123455 678899999998764

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=96.09  E-value=0.098  Score=46.17  Aligned_cols=98  Identities=23%  Similarity=0.301  Sum_probs=68.5

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.....+++++||=+|||. |..+..+++.. +. .|++++.+++-.+.+++.+.+...      .+..    .+.  .
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~~----~~~--~   86 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDVR----DWK--P   86 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cChh----hCC--C
Confidence            34556678889999999877 77888888875 44 799999999988888776543221      1211    111  1


Q ss_pred             CCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...||+|+....     . ...+..+.+.|+|||+++..
T Consensus        87 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         87 KPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             CCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            357999987442     2 34567788899999998865

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.06  E-value=0.065  Score=43.17  Aligned_cols=103  Identities=18%  Similarity=0.301  Sum_probs=61.9

Q ss_pred             HHHhCCC-CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-eeecCCCCcchHHHHHHHHH
Q 017793          175 ACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       175 ~l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +++...+ ..+.+++|.|+|.+|...++.+...|...+.+++++.++.+ ++++++... ....    .+..    +.  
T Consensus         9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~----~~--   78 (155)
T cd01065           9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLE----EL--   78 (155)
T ss_pred             HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchh----hc--
Confidence            4444443 45688999999999999888888776547888888877655 455555421 0011    1111    11  


Q ss_pred             hhCCCCcEEEEcCCChHH----HHHHHHhhcCCceEEEEccc
Q 017793          252 AMGSGIDVSFDCVGFDKT----MSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~----~~~~~~~l~~~G~~v~~g~~  289 (366)
                        -.++|+|+.|++....    .......++++..++.++..
T Consensus        79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence              2579999999986532    11112345566666655433

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PLN02366 spermidine synthase

Probab=96.04  E-value=0.076  Score=48.13  Aligned_cols=100  Identities=20%  Similarity=0.215  Sum_probs=65.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-------c-eeeecCCCCcchHHHHHHHHHh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-------D-ETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-------~-~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....++|||+|+|. |..+..+++.-+..+|.+++.+++-.+.++++-.       + .+-.+.   .|....+++.   
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~---~Da~~~l~~~---  161 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI---GDGVEFLKNA---  161 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE---ChHHHHHhhc---
Confidence            35678999999876 6677888887677789999999988888777421       1 111111   2322233221   


Q ss_pred             hCCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .++.+|+||--...          .+.+..+.+.|+++|.++...
T Consensus       162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            14579999764322          235778889999999987654

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.03  E-value=0.16  Score=43.88  Aligned_cols=91  Identities=19%  Similarity=0.244  Sum_probs=59.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCC--eEEEEcCC----hhH--------HHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAP--RIIITDVD----VQR--------LSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~--~vv~v~~~----~~~--------~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      -.+.+++|+|+|+.|..++..+...|++  +++.++++    +++        .++++.++... .     ..++.+.  
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~--   94 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEA--   94 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHH--
Confidence            3568999999999999988888888998  89999887    443        33444443211 0     0122222  


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHH-HHHHHhhcCCceEEEEc
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTM-STALNATRPGGKVCLIG  287 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~-~~~~~~l~~~G~~v~~g  287 (366)
                       +     .++|++|.+++.. .+ ...++.+.++..++.+.
T Consensus        95 -l-----~~~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          95 -L-----KGADVFIGVSRPG-VVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             -H-----hcCCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeC
Confidence             2     2489999999733 33 35667777776665544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR00417 speE spermidine synthase

Probab=96.03  E-value=0.065  Score=47.79  Aligned_cols=99  Identities=13%  Similarity=0.142  Sum_probs=62.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-------eeeecCCCCcchHHHHHHHHHhhC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-------ETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-------~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +.+.+||++|+|. |..+..+++......+.+++.+++-.+.++++-..       .-+.+.  ..+..+.+++    ..
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~--~~D~~~~l~~----~~  143 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ--IDDGFKFLAD----TE  143 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE--ECchHHHHHh----CC
Confidence            3456999999766 55666777766566899999998877777663110       001110  1232233322    24


Q ss_pred             CCCcEEEEcCC----------ChHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..+|+|+-...          ..+.++.+.+.|+++|.++...
T Consensus       144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~  186 (270)
T TIGR00417       144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS  186 (270)
T ss_pred             CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence            68999975332          2245667889999999998763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.03  E-value=0.051  Score=51.17  Aligned_cols=95  Identities=18%  Similarity=0.301  Sum_probs=56.6

Q ss_pred             EEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          187 VMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      |+|+|+|.+|..+++.+...+- ..|++.+++.++.+.+.+ +....+-...-+..+..+ +.++.    .+.|+|++|+
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-l~~~~----~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES-LAELL----RGCDVVINCA   75 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH-HHHHH----TTSSEEEE-S
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH-HHHHH----hcCCEEEECC
Confidence            6899999999999999887763 378889999998765543 221111111111123222 55553    4569999999


Q ss_pred             CChHHHHHHHHhhcCCceEEEE
Q 017793          265 GFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       265 g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |.......+-.++..+-.++..
T Consensus        76 gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   76 GPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             SGGGHHHHHHHHHHHT-EEEES
T ss_pred             ccchhHHHHHHHHHhCCCeecc
Confidence            9654445555566777777774

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=96.01  E-value=0.09  Score=46.59  Aligned_cols=105  Identities=17%  Similarity=0.234  Sum_probs=67.4

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcC-------CceeeecCCCCcchHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLG-------ADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-------~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +...++++++||-+|+|. |..+..+++..+. ..|+++|.+++-.+.+++..       .+.+.....+..++.     
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp-----  140 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLP-----  140 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCC-----
Confidence            345678899999999876 6677888887653 37999999999887775421       111111111111110     


Q ss_pred             HHHhhCCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEcccC
Q 017793          249 IQNAMGSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                         .....||.|+-+.+     . ...+..+.+.|+|||+++.+....
T Consensus       141 ---~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~  185 (261)
T PLN02233        141 ---FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK  185 (261)
T ss_pred             ---CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence               01346899875432     1 246788999999999998875443

>PRK06057 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.078  Score=46.61  Aligned_cols=81  Identities=25%  Similarity=0.342  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+.+++++.+.+. .++++.... .|. .+.......+.++.. ..+++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDV-TDEDAVNALFDTAAE-TYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeC-CCHHHHHHHHHHHHH-HcCCCCE
Confidence            478999998 59999999998888898 67777777766543 344543221 222 222233333333322 1346999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998874

>PRK06139 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.079  Score=48.74  Aligned_cols=81  Identities=33%  Similarity=0.426  Sum_probs=52.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+    ++.|.+..   .|. ++.++..+.+.++.+ ..
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv-~d~~~v~~~~~~~~~-~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDV-TDADQVKALATQAAS-FG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHH-hc
Confidence            467899998 58999999998888999 677777887765432    33454421   222 222333333333332 23


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        83 g~iD~lVnnAG~   94 (330)
T PRK06139         83 GRIDVWVNNVGV   94 (330)
T ss_pred             CCCCEEEECCCc
Confidence            579999999874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.95  E-value=0.063  Score=50.79  Aligned_cols=75  Identities=15%  Similarity=0.299  Sum_probs=53.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      -.+.++||+|+|.+|.+++..+...|+..+.++.++.++.+ ++.+++....+.+        +.+.+.    -..+|+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~----l~~aDiV  246 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQL----IKKADII  246 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHH----hccCCEE
Confidence            35789999999999999999999899878888888877755 4455652122221        122222    2469999


Q ss_pred             EEcCCChH
Q 017793          261 FDCVGFDK  268 (366)
Q Consensus       261 ld~~g~~~  268 (366)
                      |.|++.+.
T Consensus       247 I~aT~a~~  254 (414)
T PRK13940        247 IAAVNVLE  254 (414)
T ss_pred             EECcCCCC
Confidence            99999863

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.95  E-value=0.05  Score=48.07  Aligned_cols=95  Identities=19%  Similarity=0.329  Sum_probs=62.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .++.+||-+|||. |..+..+++. |. .|++++.+++..+.+++.    |.. .+.....   +..    ++.......
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~---d~~----~l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC---AAQ----DIAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc---CHH----HHhhhcCCC
Confidence            4567899899877 7888888885 66 799999999988777653    321 1111111   111    111112467


Q ss_pred             CcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEE
Q 017793          257 IDVSFDCVG-----F-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       257 ~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +|+|+....     . ...+..+.+.|+|+|.++.+
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            999985421     1 24577888999999998765

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.16  Score=44.71  Aligned_cols=80  Identities=30%  Similarity=0.405  Sum_probs=49.9

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCcee----eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADET----AKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .++||.| +|.+|...++.+...|+ .|+.++++.++.+.+. .++...+    .|. .+..++.+.+.+......+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDV-TDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecC-CCHHHHHHHHHHHHHHcCCCCC
Confidence            4689998 69999998888888898 6777777777655443 3331111    222 2223333334333322145799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99999875

>PLN02244 tocopherol O-methyltransferase

Probab=95.88  E-value=0.12  Score=47.76  Aligned_cols=96  Identities=17%  Similarity=0.238  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +++++||=+|||. |..+..+++..|+ .|++++.+++..+.+++.    +.. .+.....+..+..     +   ..+.
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~-----~---~~~~  186 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQP-----F---EDGQ  186 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCC-----C---CCCC
Confidence            7889999999876 7788888888787 799999999876665542    332 1111111111110     0   1357


Q ss_pred             CcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793          257 IDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       257 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ||+|+.....      ...+..+.+.|++||+++...
T Consensus       187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~  223 (340)
T PLN02244        187 FDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT  223 (340)
T ss_pred             ccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            9999864321      246678889999999998764

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.87  E-value=0.13  Score=45.42  Aligned_cols=99  Identities=23%  Similarity=0.294  Sum_probs=67.4

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhC
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +....++++++||=+|||. |..+..+++..+...|++++.+++..+.+++.-.. ..+.  .   +...    +.  ..
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~--~---d~~~----~~--~~   91 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE--A---DIAS----WQ--PP   91 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE--C---chhc----cC--CC
Confidence            3445678889999999876 77888888877545899999999988877764321 1111  1   1111    11  13


Q ss_pred             CCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVGF------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+|+|+....-      ...+..+.+.|++||.++..
T Consensus        92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            479999765431      24677888999999998875

>PRK07060 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.084  Score=45.96  Aligned_cols=78  Identities=21%  Similarity=0.344  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ++.+++|.| +|.+|...++.+...|. .|+.++++.++.+.+ ++++... +..+-  .+. ..+.+.... .+++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~D~--~~~-~~v~~~~~~-~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEP-LRLDV--GDD-AAIRAALAA-AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeE-EEecC--CCH-HHHHHHHHH-hCCCCEE
Confidence            467899998 58999999999998998 677787877666544 3344432 22111  121 123333221 3579999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      |++.|.
T Consensus        82 i~~ag~   87 (245)
T PRK07060         82 VNCAGI   87 (245)
T ss_pred             EECCCC
Confidence            999874

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.85  E-value=0.04  Score=49.42  Aligned_cols=76  Identities=14%  Similarity=0.135  Sum_probs=50.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.++||+|+|+.|.+++.-+...|+..+.++.++.+|.+.+ +.++... +..+.    .. ..+...    -..+|+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~~----~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLAI----EKAAEVL  194 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhhc----ccCCCEE
Confidence            578899999999999999988899998888888888776644 4443211 11110    00 111111    2469999


Q ss_pred             EEcCCCh
Q 017793          261 FDCVGFD  267 (366)
Q Consensus       261 ld~~g~~  267 (366)
                      ++|++..
T Consensus       195 InaTp~g  201 (282)
T TIGR01809       195 VSTVPAD  201 (282)
T ss_pred             EECCCCC
Confidence            9998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK03612 spermidine synthase; Provisional

Probab=95.80  E-value=0.062  Score=52.60  Aligned_cols=98  Identities=16%  Similarity=0.184  Sum_probs=64.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-C----------ceeeecCCCCcchHHHHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-A----------DETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~----------~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +++++||++|+|. |..+..+++.-+.+++.+++.+++-.+.+++.. .          +.+..+.   .|..+.+++  
T Consensus       296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~---~Da~~~l~~--  369 (521)
T PRK03612        296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVN---DDAFNWLRK--  369 (521)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEE---ChHHHHHHh--
Confidence            5678999999774 677777887645468999999999999888721 1          1111111   233232322  


Q ss_pred             HhhCCCCcEEEEcCCCh-----------HHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ..+.+|+|+-....+           +.++.+.+.|+++|.++...
T Consensus       370 --~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~  415 (521)
T PRK03612        370 --LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS  415 (521)
T ss_pred             --CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence              246899997644321           24667889999999988754

>PRK12939 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.24  Score=43.18  Aligned_cols=82  Identities=16%  Similarity=0.153  Sum_probs=49.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|.+|...+..+...|. +++.+++++++.+.+ ++   .+... .+..+ .+..+..+.+.+.... -+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-LG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            467899998 69999998888888898 677777776654432 22   23221 11111 1222222333333221 25


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|++|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.79  E-value=0.1  Score=38.97  Aligned_cols=90  Identities=14%  Similarity=0.246  Sum_probs=57.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.+|||.|+|.+|..-++.+...|+ .+.++....   +..+  +.-...   .  ..+.+.        -.++++|+.
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~---~--~~~~~~--------l~~~~lV~~   66 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI---R--REFEED--------LDGADLVFA   66 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE---E--SS-GGG--------CTTESEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH---h--hhHHHH--------HhhheEEEe
Confidence            47899999999999999999999998 677776654   2222  211111   1  122211        357999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                      +.+.+..-.......+..|.++-+...+.
T Consensus        67 at~d~~~n~~i~~~a~~~~i~vn~~D~p~   95 (103)
T PF13241_consen   67 ATDDPELNEAIYADARARGILVNVVDDPE   95 (103)
T ss_dssp             -SS-HHHHHHHHHHHHHTTSEEEETT-CC
T ss_pred             cCCCHHHHHHHHHHHhhCCEEEEECCCcC
Confidence            99987666666666777888887765443

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.11  Score=45.56  Aligned_cols=82  Identities=20%  Similarity=0.348  Sum_probs=51.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c---CCc-eeeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|.+|...+..+...|+ .|+.+.+++++.+.+.+ +   +.. ..+..+ ++..++.+.+.++.. ..+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   85 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EAG   85 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hcC
Confidence            478999998 69999999988888899 68888788776543322 1   211 122111 222334443433332 235


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|++|.+.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.29  Score=43.24  Aligned_cols=81  Identities=22%  Similarity=0.304  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.++++.++.+ ..++++... .  .|. .+..++.+.+.++.+. -+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDI-TDDAAIERAVATVVAR-FGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecC-CCHHHHHHHHHHHHHH-hCCC
Confidence            367899998 69999998888888899 6787778776544 444454321 1  222 2223344444444332 2469


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++.+.|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999998874

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.78  E-value=0.12  Score=45.93  Aligned_cols=106  Identities=15%  Similarity=0.227  Sum_probs=68.2

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHh
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ..+...+++++.+||=+|+|. |..+..+++..++ .|++++.+++-.+.+++.... ..+.+..  .++..    . ..
T Consensus        43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~~----~-~~  113 (263)
T PTZ00098         43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDILK----K-DF  113 (263)
T ss_pred             HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCccc----C-CC
Confidence            345667889999999999875 6667777777777 799999999888777764221 1111101  11110    0 00


Q ss_pred             hCCCCcEEEEc--C---C---ChHHHHHHHHhhcCCceEEEEcc
Q 017793          253 MGSGIDVSFDC--V---G---FDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       253 ~~~~~d~vld~--~---g---~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ....||+|+..  .   +   -...+..+.+.|+|+|+++....
T Consensus       114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            13569999862  1   1   12356778899999999987654

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.78  E-value=0.27  Score=44.23  Aligned_cols=56  Identities=25%  Similarity=0.309  Sum_probs=46.4

Q ss_pred             HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHHHcCCceee
Q 017793          177 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV---DVQRLSIARNLGADETA  233 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~---~~~~~~~~~~lg~~~~~  233 (366)
                      +.+.++||.++||=. +|..|.....++...|. +++.+-.   +.||...+++||+..+.
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            458899999999998 79999999999999999 5555533   45788899999997654

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=95.78  E-value=0.031  Score=48.56  Aligned_cols=107  Identities=22%  Similarity=0.389  Sum_probs=63.6

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +....++|++||=.|||. |..+..+++..+. ..|+++|.+++-++.+++    .+...+.-...+.+++.     +  
T Consensus        41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-----~--  112 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-----F--  112 (233)
T ss_dssp             HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S--
T ss_pred             hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-----C--
Confidence            445678899999998766 7788889988763 389999999987777654    33322211112222221     1  


Q ss_pred             hhCCCCcEEEEcCCCh------HHHHHHHHhhcCCceEEEEcccCCC
Q 017793          252 AMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKTE  292 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~~  292 (366)
                       ....||.|..+.|-.      ..+.+..+.|+|||+++.+....+.
T Consensus       113 -~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p~  158 (233)
T PF01209_consen  113 -PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKPR  158 (233)
T ss_dssp             --TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-S
T ss_pred             -CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCCC
Confidence             145699998766532      4678899999999999988755443

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=95.76  E-value=0.23  Score=47.42  Aligned_cols=101  Identities=17%  Similarity=0.250  Sum_probs=64.3

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ..+.++|++||=.|||+ |.-+++++..++ ...|++++.++++.+.++    ++|.+.+.....+..++    ...   
T Consensus       232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l----~~~---  303 (431)
T PRK14903        232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAERL----TEY---  303 (431)
T ss_pred             HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhhh----hhh---
Confidence            35678999988888766 656667777663 338999999999987775    45665432222221111    111   


Q ss_pred             hCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+.||.|+-   |+|..                         ..+..+++.|++||.++..
T Consensus       304 ~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs  365 (431)
T PRK14903        304 VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYS  365 (431)
T ss_pred             hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            1346999974   44332                         1355788899999997754

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.76  E-value=0.14  Score=45.74  Aligned_cols=88  Identities=27%  Similarity=0.332  Sum_probs=57.9

Q ss_pred             EEEEECCCHHHHH-HHHHHHHCCCCeEEEEcCChhH--HHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMGSGPIGLV-TLLAARAFGAPRIIITDVDVQR--LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G~g~vG~~-ai~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +|.|+|+|.+|.. +..+.+..+++.+.+++.++++  .++++++|......      ++.    .+..  ...+|+|++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e----~ll~--~~dIDaV~i   70 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------GVD----GLLA--NPDIDIVFD   70 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------CHH----HHhc--CCCCCEEEE
Confidence            6889999999974 4666665567545555555554  45677788654321      222    2221  246999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEE
Q 017793          263 CVGFDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~  285 (366)
                      +.+...+...+...+..|-.++.
T Consensus        71 aTp~~~H~e~a~~al~aGk~VId   93 (285)
T TIGR03215        71 ATSAKAHARHARLLAELGKIVID   93 (285)
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEE
Confidence            99998888777777666655544

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.1  Score=47.10  Aligned_cols=81  Identities=27%  Similarity=0.388  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCc-ee----eecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGAD-ET----AKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~~----~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|++|...++.+...|+ .|+.+++++++.+. .++++.. .+    .|. ++..+....+.++.+. -+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADV-TDLAAMQAAAEEAVER-FG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-CCHHHHHHHHHHHHHH-cC
Confidence            468999998 69999999999988999 67777787776553 4455421 11    232 2223333444444332 25


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++++.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.72  E-value=0.041  Score=49.02  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=38.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  226 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  226 (366)
                      .++.+++|+|+|+.+.+++.-++..|+.++.++.++.+|.+.+.+
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            458999999999999999999999998889999898888765544

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.71  E-value=0.33  Score=39.32  Aligned_cols=86  Identities=12%  Similarity=0.088  Sum_probs=51.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|||.|+|.+|..-++.+...|+ .|.+++  ++..+.+++++.-.. .  .  ..+.       ...-.++|+|+-
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~--~--~~~~-------~~dl~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-K--Q--KTFS-------NDDIKDAHLIYA   76 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-E--e--cccC-------hhcCCCceEEEE
Confidence            47899999999999988888777898 565653  443333444542111 1  1  1111       111357999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEE
Q 017793          263 CVGFDKTMSTALNATRPGGKVC  284 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v  284 (366)
                      +.+.++ .+..+..+++.+.++
T Consensus        77 aT~d~e-~N~~i~~~a~~~~~v   97 (157)
T PRK06719         77 ATNQHA-VNMMVKQAAHDFQWV   97 (157)
T ss_pred             CCCCHH-HHHHHHHHHHHCCcE
Confidence            998764 555555554443333

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.70  E-value=0.13  Score=46.12  Aligned_cols=92  Identities=25%  Similarity=0.304  Sum_probs=58.1

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCceeeecCCCCcchHHHHHHHHHh-hCCCCcEE
Q 017793          185 TNVMIMGSGPIGLV-TLLAARAFGAPRIIITDVDVQ--RLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-MGSGIDVS  260 (366)
Q Consensus       185 ~~vlI~G~g~vG~~-ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~v  260 (366)
                      -++.|+|+|.+|.. +..+.+.-+++.+.+++.+++  ...+++++|.....      .++..    +.+. .-..+|+|
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~----LL~~~~~~dIDiV   74 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDG----LLAMPEFDDIDIV   74 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHH----HHhCcCCCCCCEE
Confidence            47899999999986 555555456755555656554  34567778754321      12222    2220 01569999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |++.+...+...+..++..|-.++..
T Consensus        75 f~AT~a~~H~e~a~~a~eaGk~VID~  100 (302)
T PRK08300         75 FDATSAGAHVRHAAKLREAGIRAIDL  100 (302)
T ss_pred             EECCCHHHHHHHHHHHHHcCCeEEEC
Confidence            99999887777776666666555554

>PRK07806 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.37  Score=41.99  Aligned_cols=103  Identities=20%  Similarity=0.249  Sum_probs=58.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHH-HH---HHcCCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLS-IA---RNLGADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~-~~---~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|.+|...+..+...|. .|+++.++. ++.+ ..   +..+... .  .|+ ++.++..+.+.++.. .
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADL-TDEESVAALMDTARE-E   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHHHH-h
Confidence            357899998 69999998888888898 566655543 3322 22   2223221 1  122 222233333333322 1


Q ss_pred             CCCCcEEEEcCCCh-------------------HHHHHHHHhhcCCceEEEEcc
Q 017793          254 GSGIDVSFDCVGFD-------------------KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      .+++|+++.+.+..                   ...+.+...+..+|+++.++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            24689999887642                   133445555556788887764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.69  E-value=0.11  Score=46.00  Aligned_cols=80  Identities=21%  Similarity=0.239  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ++.++||.| +|++|...++.+...|+ +|+.+++++++.+.+.+. +... .  .|. .+..+..+.+.++.+. -+.+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDV-RSLDDHKEAVARCVAA-FGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEecc-CCHHHHHHHHHHHHHH-hCCC
Confidence            467899998 68999998888888899 677787877766555442 3211 1  121 1222333334333322 2568


Q ss_pred             cEEEEcCC
Q 017793          258 DVSFDCVG  265 (366)
Q Consensus       258 d~vld~~g  265 (366)
                      |+++.+.|
T Consensus        81 d~li~~Ag   88 (262)
T TIGR03325        81 DCLIPNAG   88 (262)
T ss_pred             CEEEECCC
Confidence            99999986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.69  E-value=0.4  Score=42.88  Aligned_cols=61  Identities=26%  Similarity=0.355  Sum_probs=46.8

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEE--cCChhHHHHHHHcCCceeee
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAK  234 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~  234 (366)
                      ++.+++.++||.+|+=-=+|..|+....+|+..|.+.++++  .-+.+|..+++.+|+..+..
T Consensus        52 ~Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t  114 (300)
T COG0031          52 DAEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT  114 (300)
T ss_pred             HHHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence            34456789999955443479999999999999999655555  34678999999999976644

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.69  E-value=0.39  Score=40.81  Aligned_cols=93  Identities=15%  Similarity=0.179  Sum_probs=57.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .|.+|||.|+|.+|...++.+...|+ .|.+++.... ....+.+.|-  +... .  .++...  .     -.++++||
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~--i~~~-~--~~~~~~--d-----l~~~~lVi   74 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGG--ITWL-A--RCFDAD--I-----LEGAFLVI   74 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCC--EEEE-e--CCCCHH--H-----hCCcEEEE
Confidence            36799999999999999999999999 5666654432 2222233331  1111 1  111111  1     24799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      -+.+.++.-.......+..|..+-.-.
T Consensus        75 ~at~d~~ln~~i~~~a~~~~ilvn~~d  101 (205)
T TIGR01470        75 AATDDEELNRRVAHAARARGVPVNVVD  101 (205)
T ss_pred             ECCCCHHHHHHHHHHHHHcCCEEEECC
Confidence            999987555556666667777665443

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.68  E-value=0.19  Score=43.75  Aligned_cols=105  Identities=18%  Similarity=0.213  Sum_probs=67.4

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+..++.+||-+|+|. |..++.+++.++ ..++++++.+++..+.+++    .|...-+.+..  .+..+.+.++....
T Consensus        64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~~~  140 (234)
T PLN02781         64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLNND  140 (234)
T ss_pred             HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHhCC
Confidence            4455678999999754 666777777653 4489999999988777654    45432222211  34444454443211


Q ss_pred             -CCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          254 -GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 -~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ...||+||--...   ...+..+.+.|++||.++.-
T Consensus       141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence             3579999755432   24567788999999987753

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.64  E-value=0.07  Score=45.04  Aligned_cols=95  Identities=18%  Similarity=0.277  Sum_probs=58.8

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ....++.+||-.|||. |..++.+++. |. .|++++.+++-.+.+++.    +.. + ..  ...+...    ..  ..
T Consensus        26 ~~~~~~~~vLDiGcG~-G~~a~~la~~-g~-~V~~iD~s~~~l~~a~~~~~~~~~~-v-~~--~~~d~~~----~~--~~   92 (195)
T TIGR00477        26 VKTVAPCKTLDLGCGQ-GRNSLYLSLA-GY-DVRAWDHNPASIASVLDMKARENLP-L-RT--DAYDINA----AA--LN   92 (195)
T ss_pred             hccCCCCcEEEeCCCC-CHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHHhCCC-c-ee--Eeccchh----cc--cc
Confidence            3344567899999876 7788888874 77 799999998877665432    322 1 10  0011110    00  13


Q ss_pred             CCCcEEEEcCC-----C---hHHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+|+|+.+..     .   ...+..+.+.|++||.++.+
T Consensus        93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~  132 (195)
T TIGR00477        93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV  132 (195)
T ss_pred             CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            46999976521     1   24667788899999996554

Part of a tellurite-reducing operon tehA and tehB

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.62  E-value=0.089  Score=46.58  Aligned_cols=131  Identities=15%  Similarity=0.229  Sum_probs=85.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC---------CCcchHHHHHHHHHh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST---------DIEDVDTDVGKIQNA  252 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~---------~~~~~~~~~~~~~~~  252 (366)
                      -++.++|+.|.|-+|+.++-.++..|+ .|-.-+....+.+..+.+|+...-.-..         -.++|...-.++...
T Consensus       162 v~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~  240 (356)
T COG3288         162 VSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE  240 (356)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence            356788999999999999999999999 6666666777777777777653211111         112333333333344


Q ss_pred             hCCCCcEEEEcCCCh------HHHHHHHHhhcCCceEEEEcccC-CCcee--echHhhhcCcEEEEeecc
Q 017793          253 MGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAK-TEMTV--ALTPAAAREVDVIGIFRY  313 (366)
Q Consensus       253 ~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~-~~~~~--~~~~~~~~~~~~~~~~~~  313 (366)
                      .-.++|+||-+.--+      -.....+..|+||+.++.+.... +..+.  +-.....+.+++.|...-
T Consensus       241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl  310 (356)
T COG3288         241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL  310 (356)
T ss_pred             HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence            467899999876332      24567889999999999875332 22222  223455677888887543

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.59  E-value=0.35  Score=41.28  Aligned_cols=103  Identities=22%  Similarity=0.315  Sum_probs=69.5

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.+...+||=+|++. |..++.+|..+. -.+++.++.++++.+.+++    .|.+..+..... .+....+..   ..
T Consensus        55 ~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~  129 (219)
T COG4122          55 ARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL  129 (219)
T ss_pred             HHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence            4455778899898654 888889999876 3379999999999887765    565543221111 233333332   23


Q ss_pred             CCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .+.||+||-=..-   +..++.+++.|++||.++.=
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            5789999643332   35788899999999988764

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.34  Score=44.65  Aligned_cols=81  Identities=23%  Similarity=0.271  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+    ++.|....   .|+ ++..+..+.+.++.+. -
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv-~d~~~v~~~~~~~~~~-~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADV-ADAEAVQAAADRAEEE-L   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecC-CCHHHHHHHHHHHHHH-C
Confidence            357899998 69999999888888898 677777877665432    23444321   222 2222333333333221 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        84 g~iD~lInnAg~   95 (334)
T PRK07109         84 GPIDTWVNNAMV   95 (334)
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.14  Score=45.16  Aligned_cols=84  Identities=25%  Similarity=0.334  Sum_probs=51.7

Q ss_pred             CCCCCEEEEEC-CC-HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCceeeecCC---CCcchHHHHHHHH
Q 017793          181 VGPETNVMIMG-SG-PIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----LGADETAKVST---DIEDVDTDVGKIQ  250 (366)
Q Consensus       181 ~~~~~~vlI~G-~g-~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~~~~~~~---~~~~~~~~~~~~~  250 (366)
                      +.++.++||.| +| ++|.+.++.+...|+ .|+.+++++++.+...+     ++...+..+..   +..+....+.++.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            34578999998 45 799999999998999 57777777765543321     34333321111   1223333333332


Q ss_pred             HhhCCCCcEEEEcCCC
Q 017793          251 NAMGSGIDVSFDCVGF  266 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~  266 (366)
                      +. .+.+|+++.+.|.
T Consensus        93 ~~-~g~id~li~~ag~  107 (262)
T PRK07831         93 ER-LGRLDVLVNNAGL  107 (262)
T ss_pred             HH-cCCCCEEEECCCC
Confidence            22 3579999999984

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=95.58  E-value=0.17  Score=48.38  Aligned_cols=104  Identities=18%  Similarity=0.231  Sum_probs=64.2

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....++|++||=.|||+ |..+..+++.++ ...|++++.++++.+.++    .+|.+.+.....+..++...   . ..
T Consensus       247 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~---~-~~  321 (434)
T PRK14901        247 LLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLEL---K-PQ  321 (434)
T ss_pred             HhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccc---c-cc
Confidence            35678899988888665 556666776653 237999999999887664    46765433222222111100   0 00


Q ss_pred             hCCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+.||.|+-   |+|.                         ...+..+++.|++||+++..
T Consensus       322 ~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys  383 (434)
T PRK14901        322 WRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA  383 (434)
T ss_pred             ccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            1346999874   4442                         13467788899999998754

>PLN02476 O-methyltransferase

Probab=95.56  E-value=0.21  Score=44.36  Aligned_cols=105  Identities=16%  Similarity=0.210  Sum_probs=68.6

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+..+..+||-+|++. |..++.+|+.++ -.++++++.+++..+.+++    .|...-+.+..  .+..+.+.++....
T Consensus       114 ~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~~~~  190 (278)
T PLN02476        114 VQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMIQNG  190 (278)
T ss_pred             HHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcc
Confidence            4456678999999644 777778888764 2369999999998777744    56543222222  34455555543211


Q ss_pred             -CCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEE
Q 017793          254 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~  286 (366)
                       ...||.||--....   ..++.+++.|++||.++.=
T Consensus       191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence             35799996554432   3577888999999987753

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=95.55  E-value=0.11  Score=44.70  Aligned_cols=98  Identities=13%  Similarity=0.145  Sum_probs=61.3

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce---------------eeecCCCCcch
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE---------------TAKVSTDIEDV  242 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~---------------~~~~~~~~~~~  242 (366)
                      ....++.+||+.|||. |.-++-||. .|. .|++++.++...+.+ ++.+...               +..+..   |+
T Consensus        33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~---D~  106 (218)
T PRK13255         33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG---DF  106 (218)
T ss_pred             hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC---cc
Confidence            3456778999999887 788888886 698 799999999877754 3333211               100111   11


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEE
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .+    +.......||.|+|..--        ...+..+.+.|+++|+++++
T Consensus       107 ~~----l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        107 FA----LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             cC----CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            11    100012468999985521        13467788899999975543

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=95.54  E-value=0.29  Score=46.73  Aligned_cols=103  Identities=14%  Similarity=0.140  Sum_probs=64.3

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~~~~~~~  251 (366)
                      .....++|++||=+|||+ |..+.++++..+...+++++.++++.+.++    .+|.+. +.....+......    .. 
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~----~~-  305 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ----WA-  305 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc----cc-
Confidence            445678899999988765 556667777665348999999999876654    456552 1111111111100    00 


Q ss_pred             hhCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                       ....||.||-   |+|..                         ..+..+++.|++||+++..
T Consensus       306 -~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys  367 (426)
T TIGR00563       306 -ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA  367 (426)
T ss_pred             -cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             1346999974   44421                         3566788899999998864

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK07574 formate dehydrogenase; Provisional

Probab=95.52  E-value=0.29  Score=45.81  Aligned_cols=92  Identities=21%  Similarity=0.229  Sum_probs=61.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|....+.++..|+ .|++.+++....+..+.++...   +    .+    +.++.    ...|+|+-
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~----l~ell----~~aDvV~l  254 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VS----FDSLV----SVCDVVTI  254 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CC----HHHHh----hcCCEEEE
Confidence            46789999999999999999999999 7888887654444444455321   1    12    22232    35899988


Q ss_pred             cCCChHHH-----HHHHHhhcCCceEEEEcccC
Q 017793          263 CVGFDKTM-----STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       263 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +.+-....     ...+..|+++..++-++...
T Consensus       255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  287 (385)
T PRK07574        255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK  287 (385)
T ss_pred             cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence            77643222     23567788888777665433

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.51  E-value=0.5  Score=40.01  Aligned_cols=46  Identities=24%  Similarity=0.370  Sum_probs=38.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGA  229 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~  229 (366)
                      .|.+++|+|.|.+|..+++.+...|+ +|++++.++++.+.+. .+++
T Consensus        27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~   73 (200)
T cd01075          27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA   73 (200)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence            56889999999999999999999999 7888888888766554 3454

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.12  Score=46.15  Aligned_cols=80  Identities=26%  Similarity=0.265  Sum_probs=51.0

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee----eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET----AKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      +.++||.| +|.+|.+.++.+...|+ +|+++++++++.+.+.+.....+    .|. ++.+.....+++..+. -+++|
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-~d~~~~~~~~~~~~~~-~~~~d   80 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDV-TDFDAIDAVVADAEAT-FGPID   80 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccC-CCHHHHHHHHHHHHHH-hCCCC
Confidence            56799998 69999998888888898 68888888877665544322211    122 2222333333333221 24699


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.48  E-value=0.051  Score=52.33  Aligned_cols=93  Identities=11%  Similarity=0.148  Sum_probs=58.4

Q ss_pred             hCCCCCCCEEE----EEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHH
Q 017793          178 RANVGPETNVM----IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       178 ~~~~~~~~~vl----I~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ..++++|+++|    |+| +|++|.+++|+++..|+ .|+++...+++....+..+.+. +++  .....+...+...  
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~--  102 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKAL--  102 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHH--
Confidence            35678899988    876 79999999999999999 5776655555333333333332 333  2222233333222  


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                                     .......++.|.++|+++.++...
T Consensus       103 ---------------~~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        103 ---------------YEFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             ---------------HHHHHHHHHhccCCCEEEEEcccc
Confidence                           124566778888889988887543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.48  E-value=0.14  Score=45.06  Aligned_cols=81  Identities=17%  Similarity=0.176  Sum_probs=48.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.++||.| +|++|...++.+...|++ |+.+ .++++..+.+++.+...+ .|. ++..+..+.+.++.+. -+++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVFTIKCDV-GNRDQVKKSKEVVEKE-FGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCeEEEecC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence            367899998 699999988888888984 5554 344444444444333221 222 2233444444444332 357999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9999875

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.17  Score=44.78  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---CCc-ee--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL---GAD-ET--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l---g~~-~~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+. ++   +.. ..  .|+ ++.....+.+.++.+. -
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADL-AHPEATAGLAGQAVEA-F   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHH-c
Confidence            468899998 68999999988888899 6777878776654332 22   222 11  222 2222233333333322 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus        86 ~~id~vi~~Ag~   97 (263)
T PRK07814         86 GRLDIVVNNVGG   97 (263)
T ss_pred             CCCCEEEECCCC
Confidence            479999998873

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.45  E-value=0.2  Score=43.71  Aligned_cols=81  Identities=21%  Similarity=0.313  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|++|...++.+...|. +|+.+++++++.+.+    +..+... .+..+ .+.....+.+..+.+. .+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            467899998 59999999998888898 688888877654432    2233321 11111 1222333333333321 24


Q ss_pred             CCcEEEEcCC
Q 017793          256 GIDVSFDCVG  265 (366)
Q Consensus       256 ~~d~vld~~g  265 (366)
                      ++|.+|.+.|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            7899999987

>PRK08177 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.13  Score=44.26  Aligned_cols=78  Identities=21%  Similarity=0.240  Sum_probs=48.3

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC-CCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+++|.| +|++|...+..+...|+ .|+++++++++.+.+++++.......+ .+.+++.+..+.+   ...++|+++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence            4689998 69999988877777898 788888877766555554322221111 1122222333222   2357999999


Q ss_pred             cCCC
Q 017793          263 CVGF  266 (366)
Q Consensus       263 ~~g~  266 (366)
                      +.|.
T Consensus        78 ~ag~   81 (225)
T PRK08177         78 NAGI   81 (225)
T ss_pred             cCcc
Confidence            8764

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.42  E-value=0.34  Score=38.47  Aligned_cols=32  Identities=28%  Similarity=0.474  Sum_probs=28.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      +|+|.|+|++|...+..+.+.|..++..+|.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            58999999999999999999999888888654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.41  E-value=0.13  Score=45.40  Aligned_cols=82  Identities=21%  Similarity=0.246  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eeeecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.++||.| +|++|...++.+...|+ .|+.+++++++.+.+. +++.. ..+..+ .+..+....+.++.+. -+.+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence            467899998 68999998888888899 6777878777665443 33321 111111 2222333444444332 34799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=95.38  E-value=0.19  Score=42.62  Aligned_cols=98  Identities=14%  Similarity=0.109  Sum_probs=63.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.+||-+|||. |..+..+++......+++++.+++..+.+++    .+...+....   .+....+...  .....+|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D  113 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD  113 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence            678888899877 8788888887644479999999988877754    2333221111   1221122111  1145689


Q ss_pred             EEEEcCC--------------ChHHHHHHHHhhcCCceEEEE
Q 017793          259 VSFDCVG--------------FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       259 ~vld~~g--------------~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .|+-...              ....+..+.+.|+++|.++..
T Consensus       114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~  155 (202)
T PRK00121        114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFA  155 (202)
T ss_pred             eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEE
Confidence            8876432              134678889999999999875

>PRK09186 flagellin modification protein A; Provisional

Probab=95.36  E-value=0.44  Score=41.74  Aligned_cols=80  Identities=24%  Similarity=0.346  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc----CCce----eeecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL----GADE----TAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~----~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ++.++||.| +|.+|...+..+...|+ .|+.+.+++++.+. ++++    +...    ..|. ++...+.+.+.++...
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDI-TDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecC-CCHHHHHHHHHHHHHH
Confidence            467899998 68999998888888898 67777777666543 2332    2221    1222 2223333444443322


Q ss_pred             hCCCCcEEEEcCC
Q 017793          253 MGSGIDVSFDCVG  265 (366)
Q Consensus       253 ~~~~~d~vld~~g  265 (366)
                       -+++|+++.+.+
T Consensus        81 -~~~id~vi~~A~   92 (256)
T PRK09186         81 -YGKIDGAVNCAY   92 (256)
T ss_pred             -cCCccEEEECCc
Confidence             346999999885

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.36  E-value=0.27  Score=42.03  Aligned_cols=34  Identities=26%  Similarity=0.386  Sum_probs=30.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|+|.|+|++|...++.+.+.|..++..+|.+
T Consensus        28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4679999999999999998888999889888776

>PLN03139 formate dehydrogenase; Provisional

Probab=95.35  E-value=0.32  Score=45.53  Aligned_cols=91  Identities=16%  Similarity=0.203  Sum_probs=61.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|+ +|++.+++....+..++.|+...       .+    +.++.    ...|+|+-
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~----l~ell----~~sDvV~l  261 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------ED----LDAML----PKCDVVVI  261 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CC----HHHHH----hhCCEEEE
Confidence            47799999999999999999999999 68888876544445455554211       12    22232    34789887


Q ss_pred             cCCChHHH-----HHHHHhhcCCceEEEEccc
Q 017793          263 CVGFDKTM-----STALNATRPGGKVCLIGLA  289 (366)
Q Consensus       263 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~  289 (366)
                      +.+.....     ...+..|+++..++-++..
T Consensus       262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG  293 (386)
T PLN03139        262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARG  293 (386)
T ss_pred             eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCC
Confidence            77643211     2356778888877766543

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.33  E-value=0.25  Score=45.48  Aligned_cols=34  Identities=29%  Similarity=0.509  Sum_probs=30.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|+|.|+|++|..+++.+...|...+..+|.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999999999999889999875

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.33  E-value=0.23  Score=41.07  Aligned_cols=33  Identities=27%  Similarity=0.377  Sum_probs=28.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      +|+|.|+|++|...++.+.+.|...+..+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            589999999999988888889998888887664

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=95.32  E-value=0.13  Score=43.66  Aligned_cols=104  Identities=24%  Similarity=0.296  Sum_probs=67.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh-C
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM-G  254 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~-~  254 (366)
                      .....+||-+|++. |..++.+|+.+.- .+++.++.++++.+.+++    .|...-+.+..  .+..+.+.++.... .
T Consensus        43 ~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~~~  119 (205)
T PF01596_consen   43 LTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDGEE  119 (205)
T ss_dssp             HHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTTTT
T ss_pred             hcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhccCC
Confidence            34567999999765 8889999987642 389999999998877754    45433222211  34555566555322 2


Q ss_pred             CCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +.||.||--..-.   ..+..++++|++||.++.=.
T Consensus       120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN  155 (205)
T PF01596_consen  120 GQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN  155 (205)
T ss_dssp             TSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred             CceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence            5799995433322   35677889999999887643

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.22  Score=44.96  Aligned_cols=81  Identities=20%  Similarity=0.321  Sum_probs=49.8

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.++||.| +|++|...++.+...|+ .|+.++++.++.+.+.    +.+.+. .+..+ .+..+..+.+.++.+. -+.
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g~  117 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-IGG  117 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            57899998 69999998888877898 6788878876654332    223221 11111 1222333333333322 347


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus       118 id~li~~AG~  127 (293)
T PRK05866        118 VDILINNAGR  127 (293)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.32  E-value=0.29  Score=39.58  Aligned_cols=92  Identities=20%  Similarity=0.252  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ..-.|.+++|.|=|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|....        .    +.+.    -...|+
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~----~~~a----~~~adi   81 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------T----LEEA----LRDADI   81 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE-------------HHHH----TTT-SE
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------C----HHHH----HhhCCE
Confidence            34578999999999999999999999999 89999999887766655565321        1    1222    246899


Q ss_pred             EEEcCCChHH-HHHHHHhhcCCceEEEEcc
Q 017793          260 SFDCVGFDKT-MSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       260 vld~~g~~~~-~~~~~~~l~~~G~~v~~g~  288 (366)
                      ++.+.|.... -...++.|+++..+...|.
T Consensus        82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   82 FVTATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             EEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             EEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence            9999997653 3456678888876665553

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.31  E-value=0.3  Score=42.61  Aligned_cols=34  Identities=26%  Similarity=0.420  Sum_probs=29.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      +.+|+|.|+|++|..+++.+.+.|..++..+|.+
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4789999999999999999999999888888643

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK14904 16S rRNA methyltransferase B; Provisional

Probab=95.31  E-value=0.34  Score=46.55  Aligned_cols=100  Identities=21%  Similarity=0.273  Sum_probs=62.4

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ......+|++||=+|+|+ |..+..+++.++ ...|++++.++++.+.++    .+|.+.+.....+..++       . 
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~-------~-  314 (445)
T PRK14904        244 LLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSF-------S-  314 (445)
T ss_pred             HhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCccccc-------c-
Confidence            445678899999888655 445555555442 237999999999876664    45665332222221111       1 


Q ss_pred             hhCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                       ....||.|+-   |+|..                         ..+..+.+.|++||+++..
T Consensus       315 -~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvys  376 (445)
T PRK14904        315 -PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYA  376 (445)
T ss_pred             -cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             1346999974   44432                         2466778889999998864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.28  E-value=0.17  Score=44.40  Aligned_cols=82  Identities=18%  Similarity=0.228  Sum_probs=49.6

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC---CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS---TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.|+   +++|.+.++.+...|+ +|+.+.++++..+.++++....+..+.   ++..+..+.+.++.+. -+.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hCC
Confidence            4678999984   5899988887777899 577776665444455554322221111   2223334444444332 246


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        84 iD~lv~nAg~   93 (252)
T PRK06079         84 IDGIVHAIAY   93 (252)
T ss_pred             CCEEEEcccc
Confidence            9999998873

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.27  E-value=0.17  Score=44.15  Aligned_cols=82  Identities=18%  Similarity=0.319  Sum_probs=48.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|.+|...++.+...|. .|+.+++++++.+.+ +++   +... .+..+ ++.........++.+. .+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-FG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            467899998 59999998888887898 677787776554322 222   2111 11111 2222223333333322 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.27  E-value=0.3  Score=45.02  Aligned_cols=35  Identities=31%  Similarity=0.500  Sum_probs=30.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ..+|+|.|+|++|..++..+...|...+..+|.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46799999999999999999999998888887753

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.17  Score=44.36  Aligned_cols=82  Identities=21%  Similarity=0.258  Sum_probs=51.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee--eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+.+.++++..+...++....+  +..+ .+..++...+.++... ..++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            367899998 69999988888888898 67788777766555554432221  1111 1222333333333322 24799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99999875

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=95.24  E-value=0.41  Score=46.00  Aligned_cols=101  Identities=17%  Similarity=0.268  Sum_probs=63.0

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ...++++++||=.|+|+ |..++.+++.. +...|++++.++++.+.++    ++|.+.+.....+..++.   ..+   
T Consensus       245 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~---~~~---  317 (444)
T PRK14902        245 ALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDARKVH---EKF---  317 (444)
T ss_pred             HhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCccccc---chh---
Confidence            35678899988888665 55666777765 2348999999999877664    356554322222211111   111   


Q ss_pred             hCCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ...||.|+-   |.|.                         ...+..+++.|++||+++..
T Consensus       318 -~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys  378 (444)
T PRK14902        318 -AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS  378 (444)
T ss_pred             -cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence             246999964   3332                         12466788899999998853

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.23  E-value=0.34  Score=36.96  Aligned_cols=86  Identities=22%  Similarity=0.251  Sum_probs=58.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHC--CCCeEEEEcCChhHHHH-HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +++|+|+|..|..-..-++..  +.+.+.+++.++++.+. .++++.+ .  |.    ++.+    +.+  ...+|+|+-
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~----~~~~----ll~--~~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YT----DLEE----LLA--DEDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ES----SHHH----HHH--HTTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hh----HHHH----HHH--hhcCCEEEE
Confidence            688999999998776555544  45445566777776664 5677876 2  22    2222    322  247999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEE
Q 017793          263 CVGFDKTMSTALNATRPGGKVC  284 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v  284 (366)
                      +++...+...+..++..|-.++
T Consensus        69 ~tp~~~h~~~~~~~l~~g~~v~   90 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAGKHVL   90 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTTSEEE
T ss_pred             ecCCcchHHHHHHHHHcCCEEE
Confidence            9999888888888888777543

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.21  E-value=0.68  Score=39.25  Aligned_cols=93  Identities=10%  Similarity=0.213  Sum_probs=53.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-hH-HHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QR-LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.+|||.|+|.+|...+..+...|+ .|.+++... +. .+++.+ +.  + .+...  .+...       .-.++|+|
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~--i-~~~~~--~~~~~-------~l~~adlV   74 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK--I-RWKQK--EFEPS-------DIVDAFLV   74 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC--E-EEEec--CCChh-------hcCCceEE
Confidence            46799999999999998888887898 566664432 11 122222 21  1 11111  11110       12579999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      |-+.+.++ .+..+...+..+.++.....+
T Consensus        75 iaaT~d~e-lN~~i~~~a~~~~lvn~~d~~  103 (202)
T PRK06718         75 IAATNDPR-VNEQVKEDLPENALFNVITDA  103 (202)
T ss_pred             EEcCCCHH-HHHHHHHHHHhCCcEEECCCC
Confidence            99999774 454444444445555544333

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.20  E-value=0.18  Score=44.59  Aligned_cols=81  Identities=22%  Similarity=0.335  Sum_probs=48.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc--CCc-eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL--GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l--g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+++++++++.+.+. ++  +.. ..+..+ .+..........+.+  .+.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence            467899998 69999988888888898 6777778777655443 22  111 111111 111222222222222  357


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|.++.+.|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            9999999875

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.17  Score=44.73  Aligned_cols=81  Identities=22%  Similarity=0.229  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADE-TAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~-~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+. ++    +... .+..+ ++..+..+.+.++.+  -
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN--I   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--h
Confidence            467899998 68999998888888999 6777778776654332 22    2221 11111 222334444444322  3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            569999999874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.16  E-value=0.22  Score=44.33  Aligned_cols=81  Identities=25%  Similarity=0.291  Sum_probs=48.5

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCceee--ecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADETA--KVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.|++   ++|.+.++.+...|+ .|+.+.++++..+    ..+++|....+  |. ++..+..+.+.++.+. 
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv-~d~~~v~~~~~~~~~~-   82 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDV-EDIASVDAVFEALEKK-   82 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCC-CCHHHHHHHHHHHHHH-
Confidence            46789999853   899998888888899 5666666543222    22334533222  22 2223344444444332 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+.+|+++++.|.
T Consensus        83 ~g~iD~lVnnAG~   95 (271)
T PRK06505         83 WGKLDFVVHAIGF   95 (271)
T ss_pred             hCCCCEEEECCcc
Confidence            2579999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.22  Score=43.25  Aligned_cols=83  Identities=19%  Similarity=0.332  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce----eeecCC-CCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE----TAKVST-DIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~----~~~~~~-~~~~~~~~~~~~~~~  252 (366)
                      ++.+++|.| +|.+|...++.+...|+ .|+.+++++++.+.+ .+   .+...    ..|... ...++.....++...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            357899998 69999998888888899 688888887765433 22   22111    122211 122333334344333


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                      .+..+|+++.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            33578999999884

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.22  Score=43.63  Aligned_cols=81  Identities=25%  Similarity=0.272  Sum_probs=49.8

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.++||.| +|++|...++.+...|+ .|+++++++++.+.+.    +.+.. ..+..+ ++..+..+.+.++.+. .++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            46789998 68999999988888899 7888877776554332    22222 122111 2223333444443332 246


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        79 id~lI~~ag~   88 (252)
T PRK07677         79 IDALINNAAG   88 (252)
T ss_pred             ccEEEECCCC
Confidence            9999999874

>PRK06398 aldose dehydrogenase; Validated

Probab=95.11  E-value=0.13  Score=45.33  Aligned_cols=76  Identities=18%  Similarity=0.269  Sum_probs=46.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+++++++..     .... ..|. ++..+....+.++.+. -+.+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~-~~~~~i~~~~~~~~~~-~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDV-SNKEQVIKGIDYVISK-YGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence            367899998 68999998888888899 6777766654321     1111 1122 2223333444443322 3469999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +.+.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998874

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.09  E-value=0.19  Score=44.24  Aligned_cols=84  Identities=21%  Similarity=0.250  Sum_probs=51.6

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc--eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD--ETAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      -++.++||.| +|.+|...++.+...|. .|+.+.++++..+.+.+ +...  ..+..+ .+.....+.+.+.... -.+
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence            4678999998 69999999988888899 57788777665544333 2211  111111 1222333333333222 247


Q ss_pred             CcEEEEcCCCh
Q 017793          257 IDVSFDCVGFD  267 (366)
Q Consensus       257 ~d~vld~~g~~  267 (366)
                      +|.||.+.|..
T Consensus        87 ~d~vi~~ag~~   97 (264)
T PRK12829         87 LDVLVNNAGIA   97 (264)
T ss_pred             CCEEEECCCCC
Confidence            99999988753

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=95.09  E-value=0.49  Score=45.21  Aligned_cols=102  Identities=21%  Similarity=0.252  Sum_probs=62.9

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .....++|++||=.|||+ |..+..+++..+...|++++.++++.+.+++    +|....+ ...+..+...    ..  
T Consensus       238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~-~~~D~~~~~~----~~--  309 (427)
T PRK10901        238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATV-IVGDARDPAQ----WW--  309 (427)
T ss_pred             HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEE-EEcCcccchh----hc--
Confidence            345678999999888765 5566677776543489999999998776643    4543211 1111111111    10  


Q ss_pred             hCCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....||.|+-   |.+.                         ...+..+.+.|++||+++..
T Consensus       310 ~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvys  371 (427)
T PRK10901        310 DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYA  371 (427)
T ss_pred             ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            1346999973   3331                         13566788899999998754

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.08  E-value=0.28  Score=45.53  Aligned_cols=35  Identities=31%  Similarity=0.500  Sum_probs=30.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ..+|||.|+|++|..+++.+...|+.++..+|.+.
T Consensus        28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            47899999999999999999999998888887543

>PRK06484 short chain dehydrogenase; Validated

Probab=95.08  E-value=0.59  Score=45.89  Aligned_cols=104  Identities=25%  Similarity=0.318  Sum_probs=65.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| ++++|...++.+...|+ .|+.+++++++.+.+. +++....   .|. ++..+..+.+.++.+. -+.+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~i  344 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADI-TDEAAVESAFAQIQAR-WGRL  344 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccC-CCHHHHHHHHHHHHHH-cCCC
Confidence            467889998 68999998888888898 6888888777665444 3443321   222 2223333444443332 3579


Q ss_pred             cEEEEcCCChH--------------------------HHHHHHHhhcCCceEEEEccc
Q 017793          258 DVSFDCVGFDK--------------------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       258 d~vld~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      |+++.+.|...                          ..+.++..+..+|+++.++..
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~  402 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI  402 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence            99999887420                          123344556667899888643

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.08  E-value=0.25  Score=43.56  Aligned_cols=82  Identities=17%  Similarity=0.254  Sum_probs=47.7

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCCeEEEEcCChhHH----HHHHHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.|++   ++|.+.++.+...|+ .|+.++++++..    +..++++....+..+ ++.++..+.+.++.+. -
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE-W   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH-c
Confidence            46789999843   899988887777899 566666665432    222334432222211 2223344444444332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +.+|+++.+.|.
T Consensus        87 g~ld~lv~nAg~   98 (258)
T PRK07533         87 GRLDFLLHSIAF   98 (258)
T ss_pred             CCCCEEEEcCcc
Confidence            579999998863

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.07  E-value=0.72  Score=34.94  Aligned_cols=92  Identities=17%  Similarity=0.132  Sum_probs=60.0

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      |+|.|.|.+|...++.++..+. .|++++.++++.+.+++.|.. ++.-+...   ...+++   .+-..++.++-+.+.
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~---a~i~~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLER---AGIEKADAVVILTDD   72 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHH---TTGGCESEEEEESSS
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhh---cCccccCEEEEccCC
Confidence            5788999999999999998665 799999999999999988854 33322211   222322   234678999988876


Q ss_pred             hHHHH---HHHHhhcCCceEEEE
Q 017793          267 DKTMS---TALNATRPGGKVCLI  286 (366)
Q Consensus       267 ~~~~~---~~~~~l~~~G~~v~~  286 (366)
                      ...-.   ...+.+.+..+++..
T Consensus        73 d~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   73 DEENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCeEEEE
Confidence            53222   233344556666543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.18  Score=44.35  Aligned_cols=82  Identities=21%  Similarity=0.179  Sum_probs=49.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++.++||.| +|.+|...++.+...|+ .++.+.+++++.+..+++   +... .+..+ ++.......+.++... .++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence            367899998 68999988877777898 466666766655444433   3221 11111 1222233333333322 357


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999883

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.03  E-value=0.79  Score=40.60  Aligned_cols=35  Identities=23%  Similarity=0.393  Sum_probs=30.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      .+.+|+|.|+|++|..++..+-+.|..++..+|.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35789999999999999999999998888888754

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.03  E-value=0.18  Score=43.33  Aligned_cols=77  Identities=31%  Similarity=0.368  Sum_probs=48.5

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .++||.| +|.+|...++.+...|+ +++.+++++++.+.++..+... ..|. ++...+.+...++   .+.++|+++.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~---~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDV-ADPASVAGLAWKL---DGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecC-CCHHHHHHHHHHh---cCCCCCEEEE
Confidence            3688998 69999988887777798 6777878877766666555432 1222 1222222222222   2347999999


Q ss_pred             cCCC
Q 017793          263 CVGF  266 (366)
Q Consensus       263 ~~g~  266 (366)
                      +.|.
T Consensus        77 ~ag~   80 (222)
T PRK06953         77 VAGV   80 (222)
T ss_pred             CCCc
Confidence            8775

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.03  E-value=0.69  Score=41.04  Aligned_cols=78  Identities=27%  Similarity=0.427  Sum_probs=47.3

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee----eecCCCCcchHHHHHHHHHhhCCC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET----AKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +++|.| +|++|...++.+...|+ .|+.+++++++.+.+    +..+....    .|. ++.........++.. ..++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDI-SDYDAVAAFAADIHA-AHGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeC-CCHHHHHHHHHHHHH-hcCC
Confidence            689998 69999999988888898 577777776654322    22333221    232 122223333333322 2356


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            9999999974

>PRK08328 hypothetical protein; Provisional

Probab=95.00  E-value=0.31  Score=42.28  Aligned_cols=33  Identities=27%  Similarity=0.431  Sum_probs=29.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      +.+|+|.|+|++|..++..+...|+.++..+|.
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~   59 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE   59 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            478999999999999999999999988888864

>PRK08862 short chain dehydrogenase; Provisional

Probab=94.96  E-value=0.28  Score=42.44  Aligned_cols=81  Identities=16%  Similarity=0.169  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS---TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| ++++|.+.+..+...|+ .|+.+.+++++.+.+    ++.+.+. ..+.   .+.++..+.+.++.+..+
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNV-YSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCe-EEEEccCCCHHHHHHHHHHHHHHhC
Confidence            367899998 58999887777777899 677777777665432    2334332 1121   222333333444433333


Q ss_pred             CCCcEEEEcCC
Q 017793          255 SGIDVSFDCVG  265 (366)
Q Consensus       255 ~~~d~vld~~g  265 (366)
                      ..+|+++.+.|
T Consensus        82 ~~iD~li~nag   92 (227)
T PRK08862         82 RAPDVLVNNWT   92 (227)
T ss_pred             CCCCEEEECCc
Confidence            37999999986

>PRK08589 short chain dehydrogenase; Validated

Probab=94.94  E-value=0.23  Score=44.23  Aligned_cols=81  Identities=21%  Similarity=0.321  Sum_probs=49.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce-e--eecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-T--AKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| ++++|.+.++.+...|+ .|+.++++++..+.+.++   +... .  .|. ++..+....+.++.+. -+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDI-SDEQQVKDFASEIKEQ-FG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeec-CCHHHHHHHHHHHHHH-cC
Confidence            467899998 68999998887777898 677777774333333333   3221 1  222 2223333444444332 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        82 ~id~li~~Ag~   92 (272)
T PRK08589         82 RVDVLFNNAGV   92 (272)
T ss_pred             CcCEEEECCCC
Confidence            69999998864

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.93  E-value=0.15  Score=49.43  Aligned_cols=77  Identities=21%  Similarity=0.313  Sum_probs=52.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh---------------------hHHHHHHHcCCceeeecCCCCcc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV---------------------QRLSIARNLGADETAKVSTDIED  241 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~~  241 (366)
                      .+.+|+|+|+|+.|+.+...++..|. .|+.++..+                     ...++++++|.+...+..- ..+
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence            57899999999999999999999999 566665543                     2456778888765433211 111


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFD  267 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~  267 (366)
                      +  .+..+    ..++|.||.++|..
T Consensus       218 ~--~~~~~----~~~~D~vilAtGa~  237 (467)
T TIGR01318       218 I--SLDDL----LEDYDAVFLGVGTY  237 (467)
T ss_pred             c--CHHHH----HhcCCEEEEEeCCC
Confidence            1  11222    13699999999975

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.92  E-value=0.27  Score=44.92  Aligned_cols=102  Identities=22%  Similarity=0.251  Sum_probs=61.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHCC----CCeEEEEcC--ChhHHHHHHHcCCce------------eeecCCCCcchH--HH
Q 017793          186 NVMIMGSGPIGLVTLLAARAFG----APRIIITDV--DVQRLSIARNLGADE------------TAKVSTDIEDVD--TD  245 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g----~~~vv~v~~--~~~~~~~~~~lg~~~------------~~~~~~~~~~~~--~~  245 (366)
                      +|.|.|.|.+|....+.+...+    + .++.+..  +.+...++.++....            .+.++...-.+.  ..
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999887653    5 4555532  334445555543210            000100000000  01


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      ..++.+ ...++|+||+|.|...+...+..++..|++.+.++.+
T Consensus        80 p~~~~w-~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        80 PEALPW-RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             hhhccc-cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence            112211 2358999999999887788888899999888888754

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK07340 ornithine cyclodeaminase; Validated

Probab=94.92  E-value=0.37  Score=43.70  Aligned_cols=102  Identities=16%  Similarity=0.185  Sum_probs=65.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +...+++|+|+|..|.+.++.+.. .+.+.+.+.++++++.+ ++.++....+ ...  ..+..+.+        ..+|+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~-~~~--~~~~~~av--------~~aDi  191 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGP-TAE--PLDGEAIP--------EAVDL  191 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCC-eeE--ECCHHHHh--------hcCCE
Confidence            456789999999999888777764 67778888888887755 4445532110 000  01222222        47999


Q ss_pred             EEEcCCChHHHHHHHHhhcCCceEEEEcccCC-Cceee
Q 017793          260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVA  296 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~  296 (366)
                      |+.|.+...-+-..  .+++|-++..+|...+ ..+++
T Consensus       192 VitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~  227 (304)
T PRK07340        192 VVTATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELA  227 (304)
T ss_pred             EEEccCCCCceeCc--cCCCCCEEEecCCCCCCcccCC
Confidence            99988875432223  3788888989986543 33444

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.90  E-value=0.54  Score=39.79  Aligned_cols=34  Identities=26%  Similarity=0.450  Sum_probs=30.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|+|.|+|++|...++.+.+.|...+..+|.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4779999999999998888888999878888776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=94.88  E-value=0.29  Score=42.37  Aligned_cols=80  Identities=16%  Similarity=0.192  Sum_probs=48.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +.++||.| +|++|...++.+...|+ .|+.++++++. .+.+++.++..+ .|. ++..+....+.++... -+++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADF-STNAGIMAFIDELKQH-TDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHHHhh-CCCccEE
Confidence            35789998 68999998888888899 56666665543 334444553221 222 2223344444444321 2469999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +.+.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998874

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=94.88  E-value=0.4  Score=41.78  Aligned_cols=82  Identities=17%  Similarity=0.194  Sum_probs=49.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|.+|...+..+...|+ .|+.+++++.  ..+.+++++... .+..+ ++..++...+.++.+. .+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence            468899998 58999998888888899 6777766542  223334444321 11111 2223333333433322 3469


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++.+.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.88  E-value=0.54  Score=43.28  Aligned_cols=90  Identities=21%  Similarity=0.282  Sum_probs=60.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|. .|++.+++.+.. ...+++..    +    .++.    ++.    ...|+|+-
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~----~----~~l~----ell----~~aDiV~l  210 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAE----Y----RPLE----ELL----RESDFVSL  210 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCE----e----cCHH----HHH----hhCCEEEE
Confidence            46899999999999999999999999 688888765433 23344431    1    1222    222    34799988


Q ss_pred             cCCChHH----H-HHHHHhhcCCceEEEEcccC
Q 017793          263 CVGFDKT----M-STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       263 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +++....    + ...+..|+++..++-++...
T Consensus       211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~  243 (333)
T PRK13243        211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK  243 (333)
T ss_pred             eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence            8865321    1 24567788888887775433

>PRK07904 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.3  Score=42.99  Aligned_cols=83  Identities=18%  Similarity=0.320  Sum_probs=48.5

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCC-CCeEEEEcCChhH-HH-H---HHHcCCce--eeecC-CCCcchHHHHHHHH
Q 017793          181 VGPETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQR-LS-I---ARNLGADE--TAKVS-TDIEDVDTDVGKIQ  250 (366)
Q Consensus       181 ~~~~~~vlI~G-~g~vG~~ai~la~~~g-~~~vv~v~~~~~~-~~-~---~~~lg~~~--~~~~~-~~~~~~~~~~~~~~  250 (366)
                      +..+.++||.| +|++|...++-+...| + .|+.+.+++++ .+ .   +++.+...  .+..+ ++..+..+.++++.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            55678999998 6899998887665564 7 66666676654 32 2   23334322  22221 22233333444443


Q ss_pred             HhhCCCCcEEEEcCCC
Q 017793          251 NAMGSGIDVSFDCVGF  266 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~  266 (366)
                      +  .+++|+++.+.|.
T Consensus        84 ~--~g~id~li~~ag~   97 (253)
T PRK07904         84 A--GGDVDVAIVAFGL   97 (253)
T ss_pred             h--cCCCCEEEEeeec
Confidence            3  2579999987765

>PRK07825 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.27  Score=43.72  Aligned_cols=80  Identities=30%  Similarity=0.312  Sum_probs=50.7

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee--eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +.++||.| +|++|...++.+...|+ .|+.+++++++.+.+ ++++....  .|. ++.+++...+.++... -+++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDV-TDPASFAAFLDAVEAD-LGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence            56899998 69999998887777899 577777777765533 44441122  222 2223343444444332 257999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++.+.|.
T Consensus        82 li~~ag~   88 (273)
T PRK07825         82 LVNNAGV   88 (273)
T ss_pred             EEECCCc
Confidence            9999874

>PRK05867 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.31  Score=42.71  Aligned_cols=81  Identities=22%  Similarity=0.300  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|...++.+...|+ +|+.+++++++.+.+ .+   .+... .  .|. ++..+..+.+.++.+. -
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-SQHQQVTSMLDQVTAE-L   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence            367899998 58999998888888899 677777777665433 22   23221 1  222 2223333444443322 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus        85 g~id~lv~~ag~   96 (253)
T PRK05867         85 GGIDIAVCNAGI   96 (253)
T ss_pred             CCCCEEEECCCC
Confidence            479999998874

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.82  E-value=0.22  Score=39.20  Aligned_cols=92  Identities=18%  Similarity=0.334  Sum_probs=54.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-------------------hHHH----HHHHcCCc-eeeecCCCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-------------------QRLS----IARNLGAD-ETAKVSTDI  239 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-------------------~~~~----~~~~lg~~-~~~~~~~~~  239 (366)
                      ..+|+|.|+|++|...+..+-..|+..+..+|.+.                   .|.+    .++++... .+..+..  
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~--   79 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE--   79 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence            46899999999999888888888998888886322                   1222    22333322 2222211  


Q ss_pred             cch-HHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCce
Q 017793          240 EDV-DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK  282 (366)
Q Consensus       240 ~~~-~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~  282 (366)
                       ++ .....++.    .++|+|++|.........+.+.+...+.
T Consensus        80 -~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~  118 (135)
T PF00899_consen   80 -KIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGI  118 (135)
T ss_dssp             -HCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-
T ss_pred             -ccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCC
Confidence             22 12222222    4789999999986555555555555554

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.80  E-value=0.41  Score=37.04  Aligned_cols=94  Identities=19%  Similarity=0.165  Sum_probs=49.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHH-CCCCeEEEEcCChh---HHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          186 NVMIMGS-GPIGLVTLLAARA-FGAPRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       186 ~vlI~G~-g~vG~~ai~la~~-~g~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +|+|+|+ |-+|...++.+.. .+.+.+.+++++++   ..+.-.-.+....      .-.....+.++.    ..+|++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~------~~~v~~~l~~~~----~~~DVv   71 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPL------GVPVTDDLEELL----EEADVV   71 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-------SSBEBS-HHHHT----TH-SEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCc------ccccchhHHHhc----ccCCEE
Confidence            6899996 9999999999997 67755666666551   1111111111100      000111222222    238888


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      ||+.. ++.....++.+...|.-+.+|.++
T Consensus        72 IDfT~-p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   72 IDFTN-PDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             EEES--HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             EEcCC-hHHhHHHHHHHHhCCCCEEEECCC
Confidence            88885 445555555555556656665544

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.79  E-value=0.24  Score=46.43  Aligned_cols=72  Identities=19%  Similarity=0.369  Sum_probs=53.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+.++||+|+|-+|..++..+...|+..+.++.++.+|.+ +++++|+..+ .++    +    +...    -..+|+||
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~DvVi  243 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADVVI  243 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCEEE
Confidence            6789999999999999999999999878888878777754 7788995432 221    1    1111    24699999


Q ss_pred             EcCCCh
Q 017793          262 DCVGFD  267 (366)
Q Consensus       262 d~~g~~  267 (366)
                      -+.+.+
T Consensus       244 ssTsa~  249 (414)
T COG0373         244 SSTSAP  249 (414)
T ss_pred             EecCCC
Confidence            998876

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.78  E-value=0.46  Score=41.16  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=29.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|+|.|+|++|..++..+-+.|+..+..+|.+
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4679999999999999999888999888888754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06128 oxidoreductase; Provisional

Probab=94.77  E-value=0.92  Score=41.00  Aligned_cols=103  Identities=18%  Similarity=0.234  Sum_probs=58.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--H----HHHHHHcCCcee---eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--R----LSIARNLGADET---AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~----~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|...+..+...|+ .|+.+..+.+  +    .+.+++.+....   .|. ++.....+.+.++.+.
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDL-KDEAFCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHHHHHH
Confidence            367899998 69999998888888899 4555544322  1    223333443221   121 1222333333333322


Q ss_pred             hCCCCcEEEEcCCCh--------------------------HHHHHHHHhhcCCceEEEEcc
Q 017793          253 MGSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       253 ~~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~  288 (366)
                       -+++|+++.+.|..                          ...+.+...+.++|+++.++.
T Consensus       132 -~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS  192 (300)
T PRK06128        132 -LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS  192 (300)
T ss_pred             -hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence             34799999998741                          022334445567789888764

>PRK07024 short chain dehydrogenase; Provisional

Probab=94.75  E-value=0.28  Score=43.13  Aligned_cols=81  Identities=19%  Similarity=0.163  Sum_probs=48.7

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eeeecC---CCCcchHHHHHHHHHhhCCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ETAKVS---TDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +.++||.| +|++|...++.+...|+ .|+.++++.++.+.+ +++... .+..+.   ++.+++.+.+.++... .+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence            35899998 69999998888888899 677787877765543 333211 111111   2222333333333322 2458


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++.+.|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998873

>PTZ00146 fibrillarin; Provisional

Probab=94.74  E-value=0.45  Score=42.55  Aligned_cols=106  Identities=12%  Similarity=0.151  Sum_probs=63.9

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHH-HHHHcCC-ceeeecCCCCcchHHHHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLS-IARNLGA-DETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~-~~~~lg~-~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ..+....++++++||=+|||+ |..+..+++..|- ..|++++.+++-.+ +++.... +.+..+..+... ......+ 
T Consensus       123 ~g~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~-p~~y~~~-  199 (293)
T PTZ00146        123 GGVANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARY-PQKYRML-  199 (293)
T ss_pred             CCcceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccC-hhhhhcc-
Confidence            445667799999999999876 7788899998863 37999998865332 2221110 111111121111 1111111 


Q ss_pred             HhhCCCCcEEEEcCCChH----HHHHHHHhhcCCceEEE
Q 017793          251 NAMGSGIDVSFDCVGFDK----TMSTALNATRPGGKVCL  285 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~  285 (366)
                         ...+|+||-.+..+.    ....+...|+++|.+++
T Consensus       200 ---~~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI  235 (293)
T PTZ00146        200 ---VPMVDVIFADVAQPDQARIVALNAQYFLKNGGHFII  235 (293)
T ss_pred             ---cCCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEE
Confidence               236999988765443    23356678999999887

>PRK06198 short chain dehydrogenase; Provisional

Probab=94.74  E-value=0.37  Score=42.34  Aligned_cols=82  Identities=21%  Similarity=0.298  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.+++|.| +|.+|...++.+...|++.|+.++++.++..    .+++.+....   .|. .+...+.+.+..+... -
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~   82 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADL-SDVEDCRRVVAAADEA-F   82 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence            467899998 6899999998888889954888877765543    2233443321   122 1222233333333222 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|++|.+.|.
T Consensus        83 g~id~li~~ag~   94 (260)
T PRK06198         83 GRLDALVNAAGL   94 (260)
T ss_pred             CCCCEEEECCCc
Confidence            469999999874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.73  E-value=0.16  Score=45.24  Aligned_cols=77  Identities=18%  Similarity=0.154  Sum_probs=52.7

Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHH
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +.+++......+.+++|+|+|+.+.+++.-++..|+.++.++.++.++.+.+. .++.+    +       ...   +  
T Consensus       111 ~~~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~---~--  174 (272)
T PRK12550        111 AKLLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPD---L--  174 (272)
T ss_pred             HHHHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhh---c--
Confidence            34454444455678999999999999999888899988888888888776543 34311    1       000   1  


Q ss_pred             hhCCCCcEEEEcCCC
Q 017793          252 AMGSGIDVSFDCVGF  266 (366)
Q Consensus       252 ~~~~~~d~vld~~g~  266 (366)
                       ....+|+|++|.+.
T Consensus       175 -~~~~~dlvINaTp~  188 (272)
T PRK12550        175 -GGIEADILVNVTPI  188 (272)
T ss_pred             -ccccCCEEEECCcc
Confidence             02358999999863

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.70  E-value=0.24  Score=44.09  Aligned_cols=83  Identities=24%  Similarity=0.271  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc--ee----eecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD--ET----AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~--~~----~~~~~~~~~~~~~~~~~~~  251 (366)
                      .|..+||.| +.++|.+.+..+...|+ +|+.+.+++++.+...    ..+..  .+    .|. +..++..+.+....+
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDV-SKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcC-CCHHHHHHHHHHHHH
Confidence            467888898 68999998888888999 6777778777654332    22222  11    222 222333333333333


Q ss_pred             hhCCCCcEEEEcCCCh
Q 017793          252 AMGSGIDVSFDCVGFD  267 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~  267 (366)
                      ...+++|+.+++.|..
T Consensus        85 ~~~GkidiLvnnag~~  100 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGAL  100 (270)
T ss_pred             HhCCCCCEEEEcCCcC
Confidence            3357899999988754

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.69  E-value=0.45  Score=41.71  Aligned_cols=33  Identities=21%  Similarity=0.375  Sum_probs=29.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      ..+|+|.|+|++|..++..+.+.|+.++..+|.
T Consensus        32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   64 (245)
T PRK05690         32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF   64 (245)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            578999999999999999999999988888864

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.68  E-value=0.6  Score=42.52  Aligned_cols=90  Identities=13%  Similarity=0.147  Sum_probs=59.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|....+.++..|+ +|++.+++.++..     +.....   . ..+    +.++.    ...|+|+.
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~---~-~~~----l~e~l----~~aDvvv~  196 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA---G-REE----LSAFL----SQTRVLIN  196 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec---c-ccc----HHHHH----hcCCEEEE
Confidence            57899999999999999999999999 6888876543321     111111   0 012    22332    35899988


Q ss_pred             cCCChHHH-----HHHHHhhcCCceEEEEcccC
Q 017793          263 CVGFDKTM-----STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       263 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +.+.....     ...++.|+++..++-++...
T Consensus       197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  229 (312)
T PRK15469        197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARGV  229 (312)
T ss_pred             CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence            88753321     23567889998887776443

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=94.68  E-value=0.62  Score=40.30  Aligned_cols=104  Identities=19%  Similarity=0.341  Sum_probs=66.1

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCc----eeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGAD----ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      .....+++.+||-+|+|. |..+..+++..+ ...+++++.+++..+.+++.-..    ..+.+..  .++...    . 
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~----~-  116 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEAL----P-  116 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--cccccC----C-
Confidence            444566788999999887 888888888775 23899999999887777664211    1111111  111110    0 


Q ss_pred             hhCCCCcEEEEcCC------ChHHHHHHHHhhcCCceEEEEcc
Q 017793          252 AMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       252 ~~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      .....+|+|+....      ....+..+.++|+++|.++.+..
T Consensus       117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~  159 (239)
T PRK00216        117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF  159 (239)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence            11346898874321      13466778889999999987654

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=94.67  E-value=0.61  Score=39.79  Aligned_cols=100  Identities=18%  Similarity=0.257  Sum_probs=58.5

Q ss_pred             hCC-CCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH-hhC
Q 017793          178 RAN-VGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMG  254 (366)
Q Consensus       178 ~~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~  254 (366)
                      +.+ ++++++||=+|||+ |..+..+++..+. ..|++++.++..     .+  ..+..+..+..+.. .+.++.. ...
T Consensus        45 ~~~~~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~--~~v~~i~~D~~~~~-~~~~i~~~~~~  115 (209)
T PRK11188         45 SDKLFKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PI--VGVDFLQGDFRDEL-VLKALLERVGD  115 (209)
T ss_pred             HhccCCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CC--CCcEEEecCCCChH-HHHHHHHHhCC
Confidence            344 68899988899776 6677777777653 379999987621     11  11111112212211 1112211 125


Q ss_pred             CCCcEEEEcC-----CC------------hHHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCV-----GF------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~-----g~------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+|+|+...     |.            ...+..+.+.|++||.++..
T Consensus       116 ~~~D~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~  164 (209)
T PRK11188        116 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVK  164 (209)
T ss_pred             CCCCEEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            6799998644     21            12467788899999998874

>PRK06500 short chain dehydrogenase; Provisional

Probab=94.66  E-value=0.42  Score=41.64  Aligned_cols=82  Identities=24%  Similarity=0.284  Sum_probs=50.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee-eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+.+++++++.+ ..++++.... +..+ .+..+.......+.+ ..+++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence            467899998 69999999998888999 6788877766544 3345554321 1111 111222222333322 235799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.66  E-value=0.32  Score=42.42  Aligned_cols=82  Identities=20%  Similarity=0.231  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcC--Cce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG--ADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg--~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++.++||.| +|.+|...++.+...|. .|+.+++++++.+.+ ..+.  ... .+..+ .+..++...+.+.... ...
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            356899998 69999988888888898 588888887665433 3332  111 11111 2223333333333222 346


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|++|.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999999875

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=94.65  E-value=0.71  Score=42.99  Aligned_cols=83  Identities=16%  Similarity=0.099  Sum_probs=46.9

Q ss_pred             CCCCEEEEEC-CCHHHHH--HHHHHHHCCCCeEEEEcCCh---h-------------HHHHHHHcCCce-eeecC-CCCc
Q 017793          182 GPETNVMIMG-SGPIGLV--TLLAARAFGAPRIIITDVDV---Q-------------RLSIARNLGADE-TAKVS-TDIE  240 (366)
Q Consensus       182 ~~~~~vlI~G-~g~vG~~--ai~la~~~g~~~vv~v~~~~---~-------------~~~~~~~lg~~~-~~~~~-~~~~  240 (366)
                      ..+.++||.| ++++|++  ..+.+ ..|+ .++++....   +             -.+.++++|... .+..+ .+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            3457889998 6899998  34444 7899 455554221   1             123445566532 22221 2223


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFD  267 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~  267 (366)
                      ...+.+.++.+. -+++|+++.+++.+
T Consensus       117 ~v~~lie~I~e~-~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQD-LGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHh-cCCCCEEEECCccC
Confidence            344444444432 35799999998866

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.65  E-value=0.3  Score=42.70  Aligned_cols=81  Identities=23%  Similarity=0.259  Sum_probs=46.8

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      +.++||.| +|.+|...+..+...|++.++...+++++.+ ...+++... .  .|. .+..++.+.+.++....+.++|
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADV-TDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCC-CCHHHHHHHHHHHHHHhCCCCe
Confidence            46899998 6999999888888889843333444444443 333344221 1  122 1223334444444333344599


Q ss_pred             EEEEcCC
Q 017793          259 VSFDCVG  265 (366)
Q Consensus       259 ~vld~~g  265 (366)
                      +++.+.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999876

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.64  E-value=1.2  Score=32.45  Aligned_cols=85  Identities=21%  Similarity=0.287  Sum_probs=51.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCC---CCeEE-EEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          186 NVMIMGSGPIGLVTLLAARAFG---APRII-ITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g---~~~vv-~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +|.|+|+|.+|.+.+.-+...|   . .+. +.++++++.+.+ ++++.....      .+..+.+        ...|+|
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~--------~~advv   65 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAA--------QEADVV   65 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHH--------HHTSEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhh--------ccCCEE
Confidence            5778899999999888888888   5 455 548888877655 566643321      0122222        248999


Q ss_pred             EEcCCChHHHHHHHHh---hcCCceEEEE
Q 017793          261 FDCVGFDKTMSTALNA---TRPGGKVCLI  286 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~---l~~~G~~v~~  286 (366)
                      |-|+... .+...++.   +.++..++.+
T Consensus        66 ilav~p~-~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   66 ILAVKPQ-QLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             EE-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred             EEEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence            9999865 33333333   4555555543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06172 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.31  Score=42.64  Aligned_cols=82  Identities=23%  Similarity=0.302  Sum_probs=49.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+.+++++++.+.    +++.+... .+..+ ++..+....+.+.... -+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-YG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            467899998 68999998887777898 67778777765432    23334321 11111 1122333333333322 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.61  E-value=0.63  Score=40.30  Aligned_cols=33  Identities=21%  Similarity=0.348  Sum_probs=29.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      ..+|+|.|+|++|...+..+.+.|...+..+|.
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            478999999999999999999999988888853

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.61  E-value=0.19  Score=50.64  Aligned_cols=77  Identities=23%  Similarity=0.288  Sum_probs=53.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh---------------------HHHHHHHcCCceeeecCCCCcc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIED  241 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~  241 (366)
                      .+.+|+|+|+|+.|+.++..++..|. .|++++..+.                     +.++++++|.+...+..- ..+
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  386 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GRD  386 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CCc
Confidence            48999999999999999999999999 5777765542                     456778888765443211 111


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFD  267 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~  267 (366)
                      +  .+.++    ..++|.||.++|..
T Consensus       387 ~--~~~~l----~~~~DaV~latGa~  406 (639)
T PRK12809        387 I--TFSDL----TSEYDAVFIGVGTY  406 (639)
T ss_pred             C--CHHHH----HhcCCEEEEeCCCC
Confidence            1  12222    24699999999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.58  E-value=0.37  Score=42.54  Aligned_cols=82  Identities=24%  Similarity=0.278  Sum_probs=49.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCceeeecC---CCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADETAKVS---TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~~~~~~---~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+. ++    +...+..+.   .+..+..+.+.++.+. 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR-   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            367899998 68999998888888899 5777777776554322 21    111221111   2222333333333322 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+.+|+++.+.|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            3569999999874

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=94.57  E-value=0.58  Score=39.33  Aligned_cols=76  Identities=25%  Similarity=0.389  Sum_probs=46.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++.+++|.| +|.+|...+..+...|. .++.+.++.++.+.+. .+    +.. +.....  .+.. .+.+.    -.+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~----~~~   97 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAA----IKG   97 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHH----Hhc
Confidence            567899998 59999888887777887 6777777777655432 23    222 111111  1111 12222    146


Q ss_pred             CcEEEEcCCCh
Q 017793          257 IDVSFDCVGFD  267 (366)
Q Consensus       257 ~d~vld~~g~~  267 (366)
                      +|+||.+.+.+
T Consensus        98 ~diVi~at~~g  108 (194)
T cd01078          98 ADVVFAAGAAG  108 (194)
T ss_pred             CCEEEECCCCC
Confidence            89999988765

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.57  E-value=1  Score=41.19  Aligned_cols=90  Identities=20%  Similarity=0.288  Sum_probs=59.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.++.|+|.|.+|++..+.++..|. +|+.-+++.. .+..+++++..+        +    +.++.    ...|++.-
T Consensus       145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~----l~ell----~~sDii~l  206 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------D----LDELL----AESDIISL  206 (324)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------c----HHHHH----HhCCEEEE
Confidence            38899999999999999999998888 7888877765 444444444321        1    22232    24677744


Q ss_pred             -cCCChHHHH----HHHHhhcCCceEEEEcccC
Q 017793          263 -CVGFDKTMS----TALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       263 -~~g~~~~~~----~~~~~l~~~G~~v~~g~~~  290 (366)
                       |-.++++..    ..+..|++++.++-++...
T Consensus       207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~  239 (324)
T COG1052         207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG  239 (324)
T ss_pred             eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence             444444332    3667889999887765433

>PRK06196 oxidoreductase; Provisional

Probab=94.57  E-value=0.31  Score=44.40  Aligned_cols=81  Identities=21%  Similarity=0.298  Sum_probs=49.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee--eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+.++.++.+.+ .++..-..  .|+ ++..+..+.+.++.+ ..+++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl-~d~~~v~~~~~~~~~-~~~~iD  101 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDL-ADLESVRAFAERFLD-SGRRID  101 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccC-CCHHHHHHHHHHHHh-cCCCCC
Confidence            467899998 68999998888777898 677777777665432 33321111  122 222233333333332 135799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus       102 ~li~nAg~  109 (315)
T PRK06196        102 ILINNAGV  109 (315)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.56  E-value=0.32  Score=43.70  Aligned_cols=45  Identities=11%  Similarity=0.145  Sum_probs=32.9

Q ss_pred             HHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          174 HACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       174 ~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .+++...+. .+.++||+|+|+.+.+++..+...|+.++.++.+++
T Consensus       113 ~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        113 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             HHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            344443332 567899999999898877766678988888888874

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=94.50  E-value=0.14  Score=44.97  Aligned_cols=98  Identities=16%  Similarity=0.191  Sum_probs=63.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--------eeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--------ETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ....+|||+|.|. |..+-.+++......+.+++-+++-.+.++++-..        .+-.+.   .|-...+++    .
T Consensus        75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~---~Dg~~~l~~----~  146 (246)
T PF01564_consen   75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII---GDGRKFLKE----T  146 (246)
T ss_dssp             SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE---STHHHHHHT----S
T ss_pred             CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE---hhhHHHHHh----c
Confidence            3679999998655 66677888877677899999999988888874211        111111   233333332    2


Q ss_pred             CC-CCcEEE-EcCC---------ChHHHHHHHHhhcCCceEEEEc
Q 017793          254 GS-GIDVSF-DCVG---------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~-~~d~vl-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .. .+|+++ |...         +.+.++.+.++|+++|.++.-.
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~  191 (246)
T PF01564_consen  147 QEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA  191 (246)
T ss_dssp             SST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence            34 899996 5443         2357888999999999988754

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PRK07890 short chain dehydrogenase; Provisional

Probab=94.48  E-value=0.34  Score=42.48  Aligned_cols=81  Identities=16%  Similarity=0.189  Sum_probs=49.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce---eeecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE---TAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~---~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...+..+...|+ .|+.+++++++.+.+ +++   +...   ..|. ++...+...+.+.... -
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~   80 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDI-TDEDQCANLVALALER-F   80 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCC-CCHHHHHHHHHHHHHH-c
Confidence            567899998 68999998888888899 677777777655433 222   2221   1222 2223333333333322 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +.+|+++.+.|.
T Consensus        81 g~~d~vi~~ag~   92 (258)
T PRK07890         81 GRVDALVNNAFR   92 (258)
T ss_pred             CCccEEEECCcc
Confidence            468999998864

>PLN02253 xanthoxin dehydrogenase

Probab=94.46  E-value=0.35  Score=43.11  Aligned_cols=80  Identities=20%  Similarity=0.279  Sum_probs=48.7

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCC-cee----eecCCCCcchHHHHHHHHHhhCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA-DET----AKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.++||.| +|.+|.+.++.+...|+ .|+.++++++..+ ...+++. ..+    .|. .+.....+.+..+.+. -++
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~-~g~   94 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDV-TVEDDVSRAVDFTVDK-FGT   94 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeec-CCHHHHHHHHHHHHHH-hCC
Confidence            67899998 69999988887777898 6777777665443 3333432 111    222 2223333334433332 247


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.46  E-value=1.1  Score=39.10  Aligned_cols=105  Identities=17%  Similarity=0.229  Sum_probs=58.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHH-HHHH---cCCce-e--eecCCCCcchHHHHHHHHHh-
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLS-IARN---LGADE-T--AKVSTDIEDVDTDVGKIQNA-  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~-  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+ .+++++.+ ...+   .+... .  .|. .+..+....+.++.+. 
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANL-ESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEeccc-CCHHHHHHHHHHHHHHh
Confidence            367899998 68999999988888898 45554 34434332 2222   23221 1  121 1112222233333211 


Q ss_pred             ----hCCCCcEEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          253 ----MGSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       253 ----~~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                          +.+++|+++.+.|..          +               ..+.+++.+...|+++.++..
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~  146 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA  146 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCc
Confidence                123799999988732          0               122345566677899888754

>PLN02780 ketoreductase/ oxidoreductase

Probab=94.43  E-value=0.36  Score=44.21  Aligned_cols=41  Identities=12%  Similarity=0.168  Sum_probs=31.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~   93 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDV   93 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHH
Confidence            478999998 58999887776666799 577788888776543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.42  E-value=0.43  Score=42.12  Aligned_cols=81  Identities=16%  Similarity=0.185  Sum_probs=47.1

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G~-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.|+ +  ++|.+.++.+...|+ +|+.++++++..+.+    ++++....  .|. ++..+....++++.+. 
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv-~~~~~v~~~~~~~~~~-   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDV-TNPKSISNLFDDIKEK-   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccC-CCHHHHHHHHHHHHHH-
Confidence            4678899985 4  799988777777899 566666654322222    23343222  232 2233444444444332 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+.+|+++++.|.
T Consensus        84 ~g~iDilVnnag~   96 (260)
T PRK06603         84 WGSFDFLLHGMAF   96 (260)
T ss_pred             cCCccEEEEcccc
Confidence            2469999998863

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.42  E-value=1  Score=39.63  Aligned_cols=80  Identities=19%  Similarity=0.273  Sum_probs=46.8

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCCh---hHHH-HHHHcCCcee----eecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRLS-IARNLGADET----AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~lg~~~~----~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+.++||.|+   +++|.+.++.+...|+ +|+.+.++.   ++.+ +.+++....+    .|. ++.++..+.+.++.+
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDV-TSDEEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCC-CCHHHHHHHHHHHHH
Confidence            3678999984   5999998887777899 566664432   3333 3333421222    222 233344444444433


Q ss_pred             hhCCCCcEEEEcCC
Q 017793          252 AMGSGIDVSFDCVG  265 (366)
Q Consensus       252 ~~~~~~d~vld~~g  265 (366)
                      . -+++|+++.+.|
T Consensus        84 ~-~g~ld~lv~nag   96 (257)
T PRK08594         84 E-VGVIHGVAHCIA   96 (257)
T ss_pred             h-CCCccEEEECcc
Confidence            2 257999999876

>PRK12937 short chain dehydrogenase; Provisional

Probab=94.40  E-value=1.2  Score=38.54  Aligned_cols=104  Identities=16%  Similarity=0.198  Sum_probs=58.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHH-H---HHHcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLS-I---ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~-~---~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...++.+...|.+ ++.+.+ ++++.+ .   +++.+... .+..+ ++..+..+.++++... -
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            467899998 699999988888888994 544433 333222 2   22333221 11111 1223333444443332 3


Q ss_pred             CCCcEEEEcCCChH-------------------------HHHHHHHhhcCCceEEEEcc
Q 017793          255 SGIDVSFDCVGFDK-------------------------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       255 ~~~d~vld~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +++|++|.+.|...                         ..+.+++.+..+|+++.++.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST  140 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence            57999999887420                         12234455567788888864

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.39  E-value=0.32  Score=41.88  Aligned_cols=74  Identities=18%  Similarity=0.292  Sum_probs=45.8

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +++|.| +|++|...++.+...|+ .|+.+++++++.+.+ ++++...+ .|. .+..++.+..+++    ...+|+++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~----~~~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDN-TDPASLEEARGLF----PHHLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCC-CCHHHHHHHHHHH----hhcCcEEEE
Confidence            589998 68999998888888898 677777777766533 44443322 222 1222222222222    236899998


Q ss_pred             cCC
Q 017793          263 CVG  265 (366)
Q Consensus       263 ~~g  265 (366)
                      +.|
T Consensus        76 ~ag   78 (223)
T PRK05884         76 VPA   78 (223)
T ss_pred             CCC
Confidence            865

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.38  E-value=0.51  Score=44.25  Aligned_cols=35  Identities=31%  Similarity=0.439  Sum_probs=31.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      .+.+|+|+|+|++|..++..+...|+..+..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45789999999999999999999999889999876

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.37  E-value=0.51  Score=42.10  Aligned_cols=104  Identities=21%  Similarity=0.249  Sum_probs=62.6

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCChh---HHH-HHHHcCCcee--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQ---RLS-IARNLGADET--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.|+   +++|.+.++.+...|+ .|+.+.++++   +.+ ..++++....  .|. ++.+...+.+.++.+. 
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~i~~~-   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDV-SKPEHFKSLAESLKKD-   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecC-CCHHHHHHHHHHHHHH-
Confidence            3678999985   5899998888878899 5666666642   222 2244553322  232 2223444444444332 


Q ss_pred             CCCCcEEEEcCCCh--------------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          254 GSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       254 ~~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      -+.+|+++++.|..              +               ..+..+..+..+|+++.++..
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~  145 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL  145 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence            35799999998841              0               223455566777998887643

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.37  E-value=0.32  Score=43.17  Aligned_cols=81  Identities=22%  Similarity=0.402  Sum_probs=48.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh----HHHHHHHcC-Cc-eeeecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ----RLSIARNLG-AD-ETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~lg-~~-~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .|+.|||.| ++++|.+.++=....|+ +++..+.+++    ..+.+++.| +. -..|. ++.++......++.+.. +
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~-G  113 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEV-G  113 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhc-C
Confidence            589999998 57999764444444687 6777766554    334444444 11 12333 23344544444454433 4


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|++++++|.
T Consensus       114 ~V~ILVNNAGI  124 (300)
T KOG1201|consen  114 DVDILVNNAGI  124 (300)
T ss_pred             CceEEEecccc
Confidence            79999999875

>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed

Probab=94.37  E-value=1.1  Score=43.27  Aligned_cols=99  Identities=20%  Similarity=0.329  Sum_probs=64.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ..++|++||=.+|++ |-=+.++|..++ -..+++.+.+++|.+.+    +.+|...+...+.+...+...       ..
T Consensus       110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~~-------~~  181 (470)
T PRK11933        110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGAA-------LP  181 (470)
T ss_pred             CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhhh-------ch
Confidence            678999998887655 334566666653 33799999999987665    457877654443332222111       13


Q ss_pred             CCCcEEE-E--cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSF-D--CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vl-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..||.|+ |  |+|..                         ..+..+++.|++||+++..
T Consensus       182 ~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVYS  241 (470)
T PRK11933        182 ETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVYS  241 (470)
T ss_pred             hhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            4688886 4  55542                         3566788899999998653

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.36  E-value=0.92  Score=39.71  Aligned_cols=103  Identities=15%  Similarity=0.163  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh-
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM-  253 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~-  253 (366)
                      +.....+||-+|++ +|..++.+|+.++- .+++.++.++++.+.+++    .|...-+.+..  .+..+.+.++...+ 
T Consensus        76 ~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~~~  152 (247)
T PLN02589         76 KLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIEDGK  152 (247)
T ss_pred             HHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhccc
Confidence            34456789999964 48888888887632 379999999988776654    45433233222  34555555554321 


Q ss_pred             -CCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEE
Q 017793          254 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCL  285 (366)
Q Consensus       254 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~  285 (366)
                       .+.||.||--..-.   ..++.++++|++||.++.
T Consensus       153 ~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        153 YHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             cCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence             25799996544322   356677889999998765

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=94.34  E-value=0.25  Score=45.34  Aligned_cols=104  Identities=22%  Similarity=0.301  Sum_probs=65.0

Q ss_pred             HHhCCC-CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          176 CRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       176 l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++...+ +++.+||-+|+|. |..+..+++..+...+++++.+++-.+.+++.....-+.+..  .+.    .++. ...
T Consensus       105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~----e~lp-~~~  176 (340)
T PLN02490        105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDA----EDLP-FPT  176 (340)
T ss_pred             HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccH----HhCC-CCC
Confidence            343434 4678999999876 777888888775458999999988777776532111011100  111    1110 013


Q ss_pred             CCCcEEEEcCC------ChHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..||+|+.+-.      ....+..+.+.|+++|+++..+
T Consensus       177 ~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~  215 (340)
T PLN02490        177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIG  215 (340)
T ss_pred             CceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            46998876431      1246778899999999998765

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.34  E-value=1.1  Score=36.47  Aligned_cols=89  Identities=18%  Similarity=0.270  Sum_probs=56.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|.++|.|.+|...++-+...|. .|.+.++++++.+.+.+.|+...       .+..    ++.    ...|+||-|+.
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~----e~~----~~~dvvi~~v~   66 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPA----EAA----EQADVVILCVP   66 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHH----HHH----HHBSEEEE-SS
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhh----hHh----hcccceEeecc
Confidence            68899999999888888888898 68888999999888887774332       1112    222    23699999988


Q ss_pred             ChHHHHHH------HHhhcCCceEEEEcccC
Q 017793          266 FDKTMSTA------LNATRPGGKVCLIGLAK  290 (366)
Q Consensus       266 ~~~~~~~~------~~~l~~~G~~v~~g~~~  290 (366)
                      ........      ...+.++..++..+...
T Consensus        67 ~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~   97 (163)
T PF03446_consen   67 DDDAVEAVLFGENILAGLRPGKIIIDMSTIS   97 (163)
T ss_dssp             SHHHHHHHHHCTTHGGGS-TTEEEEE-SS--
T ss_pred             cchhhhhhhhhhHHhhccccceEEEecCCcc
Confidence            76555443      33455666666665444

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=94.33  E-value=0.47  Score=40.29  Aligned_cols=83  Identities=18%  Similarity=0.250  Sum_probs=52.4

Q ss_pred             EEEEECCCHHHHHHHHHHHH--CCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMGSGPIGLVTLLAARA--FGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~--~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +|.|.|+|.+|.....+.+.  ..++.+++.+++.++...+.+ ++...+.       +    +.++    -...|++++
T Consensus         2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s-------~----ide~----~~~~DlvVE   66 (255)
T COG1712           2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVS-------D----IDEL----IAEVDLVVE   66 (255)
T ss_pred             eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccc-------c----HHHH----hhccceeee
Confidence            57889999999999999884  357778888999988875544 3332211       1    1111    134666666


Q ss_pred             cCCChHHHHHHHHhhcCCceE
Q 017793          263 CVGFDKTMSTALNATRPGGKV  283 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~  283 (366)
                      |.+..+..+...+.|..|-.+
T Consensus        67 aAS~~Av~e~~~~~L~~g~d~   87 (255)
T COG1712          67 AASPEAVREYVPKILKAGIDV   87 (255)
T ss_pred             eCCHHHHHHHhHHHHhcCCCE
Confidence            666555555555555554433

>PRK07478 short chain dehydrogenase; Provisional

Probab=94.33  E-value=0.53  Score=41.25  Aligned_cols=81  Identities=19%  Similarity=0.204  Sum_probs=49.4

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-H---HcCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.++||.| +|++|...+..+...|+ +|+.+++++++.+.+ .   +.+.+. .+..+ ++.....+.+.++.+. -+.
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   83 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FGG   83 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cCC
Confidence            57899998 68999998888888899 677777777665433 2   233322 11111 1222333334333332 247


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        84 id~li~~ag~   93 (254)
T PRK07478         84 LDIAFNNAGT   93 (254)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK08643 acetoin reductase; Validated

Probab=94.33  E-value=0.51  Score=41.38  Aligned_cols=80  Identities=18%  Similarity=0.257  Sum_probs=48.5

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-ee--ecCCCCcchHHHHHHHHHhhCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TA--KVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ .+   .+... .+  |+ ++.+...+.+.++.+. .+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADV-SDRDQVFAAVRQVVDT-FG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCC-CCHHHHHHHHHHHHHH-cC
Confidence            46789998 68999998888888898 677777776654332 22   22221 11  21 1222333333333322 35


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|++|.+.|.
T Consensus        79 ~id~vi~~ag~   89 (256)
T PRK08643         79 DLNVVVNNAGV   89 (256)
T ss_pred             CCCEEEECCCC
Confidence            79999999864

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.32  E-value=0.2  Score=50.66  Aligned_cols=77  Identities=22%  Similarity=0.314  Sum_probs=50.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh---------------------HHHHHHHcCCceeeecCCCCcc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIED  241 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~  241 (366)
                      .+.+|+|+|+|+.|+.++..+...|. .|++++..+.                     ..+.++++|.+...+..- ..+
T Consensus       326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  403 (654)
T PRK12769        326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEV-GKD  403 (654)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEe-CCc
Confidence            57899999999999999999999999 5777765432                     345667777654322110 011


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFD  267 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~  267 (366)
                      .  .+.++    ..++|.||.+.|..
T Consensus       404 i--~~~~~----~~~~DavilAtGa~  423 (654)
T PRK12769        404 I--SLESL----LEDYDAVFVGVGTY  423 (654)
T ss_pred             C--CHHHH----HhcCCEEEEeCCCC
Confidence            1  11222    23699999988853

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.32  E-value=0.5  Score=41.77  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=47.5

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCcee--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADET--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ++.++||.|+   +++|.+.++.+...|+ .|+.+.+.++..+.+++    ++....  .|. ++.++..+.+.++.+. 
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-   81 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDV-ASDDEINQVFADLGKH-   81 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCC-CCHHHHHHHHHHHHHH-
Confidence            4678999983   4899998887777899 56655444433333333    232222  222 2233444444444332 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|+++++.|.
T Consensus        82 ~g~iD~lVnnAG~   94 (261)
T PRK08690         82 WDGLDGLVHSIGF   94 (261)
T ss_pred             hCCCcEEEECCcc
Confidence            3579999999864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.27  E-value=0.55  Score=41.34  Aligned_cols=79  Identities=27%  Similarity=0.307  Sum_probs=47.5

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCceeeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ++||.| ++++|...++.+...|+ .|+.+++++++.+.+ .++   +....+..+ ++.++..+.+.++.+. -+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            689998 68999988888777899 677777777654332 222   211111111 2223333344433322 357999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++.+.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9999874

>PRK07576 short chain dehydrogenase; Provisional

Probab=94.27  E-value=0.58  Score=41.40  Aligned_cols=80  Identities=23%  Similarity=0.306  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+ ++   .+... .  .|. ++..+....+++.... -
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~i~~~~~~~~~~-~   84 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADV-RDYAAVEAAFAQIADE-F   84 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCC-CCHHHHHHHHHHHHHH-c
Confidence            477999998 69999998888888898 678877776654322 22   23221 1  122 1222333334333322 2


Q ss_pred             CCCcEEEEcCC
Q 017793          255 SGIDVSFDCVG  265 (366)
Q Consensus       255 ~~~d~vld~~g  265 (366)
                      +++|++|.+.|
T Consensus        85 ~~iD~vi~~ag   95 (264)
T PRK07576         85 GPIDVLVSGAA   95 (264)
T ss_pred             CCCCEEEECCC
Confidence            46999998876

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.27  E-value=0.29  Score=35.19  Aligned_cols=87  Identities=22%  Similarity=0.365  Sum_probs=54.4

Q ss_pred             EECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec-CCCCcchHHHHHHHHHhhCCCCcEEEEcCCC-
Q 017793          189 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-STDIEDVDTDVGKIQNAMGSGIDVSFDCVGF-  266 (366)
Q Consensus       189 I~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-  266 (366)
                      -+|+| .|..+..+++. +...+++++.+++..+.+++........+ ..+..++.     +   ..+.||+|+....- 
T Consensus         2 diG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~-----~---~~~sfD~v~~~~~~~   71 (95)
T PF08241_consen    2 DIGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLP-----F---PDNSFDVVFSNSVLH   71 (95)
T ss_dssp             EET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSS-----S----TT-EEEEEEESHGG
T ss_pred             EecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCc-----c---cccccccccccccee
Confidence            35666 48899999998 44489999999998888887553321111 11111110     1   14679999764322 


Q ss_pred             -----hHHHHHHHHhhcCCceEEE
Q 017793          267 -----DKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       267 -----~~~~~~~~~~l~~~G~~v~  285 (366)
                           ...+..+.+.|+++|+++.
T Consensus        72 ~~~~~~~~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   72 HLEDPEAALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             GSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred             eccCHHHHHHHHHHHcCcCeEEeC
Confidence                 2467889999999999863

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK05717 oxidoreductase; Validated

Probab=94.25  E-value=0.58  Score=41.05  Aligned_cols=81  Identities=22%  Similarity=0.272  Sum_probs=49.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .|.++||.| +|.+|...+..+...|+ .|+.++++.++.+ ..++++... .  .|. ++..+....+.++.+. -+.+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~i   85 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDV-ADEAQVAAGVAEVLGQ-FGRL   85 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccC-CCHHHHHHHHHHHHHH-hCCC
Confidence            467899998 69999988888887898 6777766655443 334444321 1  121 1222333333333322 2469


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++.+.|.
T Consensus        86 d~li~~ag~   94 (255)
T PRK05717         86 DALVCNAAI   94 (255)
T ss_pred             CEEEECCCc
Confidence            999998874

>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]

Probab=94.24  E-value=0.64  Score=42.39  Aligned_cols=101  Identities=16%  Similarity=0.132  Sum_probs=68.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH------HcC-----CceeeecCCCCcchHHHHHHH
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR------NLG-----ADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~------~lg-----~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ++.-+++||.|+|. |+++-++.|.=+...|.-++-+++-.++++      +.+     -..+..++.   |.-++++. 
T Consensus       287 ~~~a~~vLvlGGGD-GLAlRellkyP~~~qI~lVdLDP~miela~~~~vlr~~N~~sf~dpRv~Vv~d---DAf~wlr~-  361 (508)
T COG4262         287 VRGARSVLVLGGGD-GLALRELLKYPQVEQITLVDLDPRMIELASHATVLRALNQGSFSDPRVTVVND---DAFQWLRT-  361 (508)
T ss_pred             ccccceEEEEcCCc-hHHHHHHHhCCCcceEEEEecCHHHHHHhhhhhHhhhhccCCccCCeeEEEec---cHHHHHHh-
Confidence            45668999999877 999999999888889999999998777765      222     122222222   33334433 


Q ss_pred             HHhhCCCCcEEEEcCCCh-----------HHHHHHHHhhcCCceEEEEccc
Q 017793          250 QNAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                         ...++|.||--...+           +....+.+.|++.|.++.....
T Consensus       362 ---a~~~fD~vIVDl~DP~tps~~rlYS~eFY~ll~~~l~e~Gl~VvQags  409 (508)
T COG4262         362 ---AADMFDVVIVDLPDPSTPSIGRLYSVEFYRLLSRHLAETGLMVVQAGS  409 (508)
T ss_pred             ---hcccccEEEEeCCCCCCcchhhhhhHHHHHHHHHhcCcCceEEEecCC
Confidence               356899986543333           2445677889999999876543

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.24  E-value=0.56  Score=41.22  Aligned_cols=80  Identities=24%  Similarity=0.309  Sum_probs=47.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+. ++    +.. +..+..+-.+. +.+.++.+. -+.
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D~~~~-~~~~~~~~~-~g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVD-VAVHALDLSSP-EAREQLAAE-AGD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEecCCCH-HHHHHHHHH-hCC
Confidence            367899998 58999998888888899 7888877776554322 22    221 11111111121 222222221 247


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=94.22  E-value=0.57  Score=41.07  Aligned_cols=81  Identities=22%  Similarity=0.331  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TA--KVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+    ++.|... .+  |. .+..++...+.++.. .-
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDV-TDHDAVRAAIDAFEA-EI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccC-CCHHHHHHHHHHHHH-hc
Confidence            467999998 69999998888887899 677777776654322    2223221 11  22 122233333333322 23


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +.+|++|.+.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            579999999875

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.21  E-value=0.52  Score=43.08  Aligned_cols=80  Identities=23%  Similarity=0.343  Sum_probs=48.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCC--cee----eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGA--DET----AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~--~~~----~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|...++.+...|+ .|+.+++++++.+. ++++..  ..+    .|+ .+.....+.+.++.+ ..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~-~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDL-GDLDSVRRFVDDFRA-LG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecC-CCHHHHHHHHHHHHH-hC
Confidence            467899998 69999998888877898 67777777766543 333321  111    122 122223333333322 23


Q ss_pred             CCCcEEEEcCC
Q 017793          255 SGIDVSFDCVG  265 (366)
Q Consensus       255 ~~~d~vld~~g  265 (366)
                      +.+|++|++.|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            56999999987

>CHL00194 ycf39 Ycf39; Provisional

Probab=94.21  E-value=0.29  Score=44.67  Aligned_cols=72  Identities=15%  Similarity=0.221  Sum_probs=46.3

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|||.| +|-+|...++.+...|. .|.++.++.++...+...+.+.+. .  +-.+. ..+....    .++|+||.++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~--Dl~d~-~~l~~al----~g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-G--DLSLP-ETLPPSF----KGVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-C--CCCCH-HHHHHHH----CCCCEEEECC
Confidence            699998 69999999988888898 677777776665555555554321 1  11121 1222222    4689999987


Q ss_pred             CC
Q 017793          265 GF  266 (366)
Q Consensus       265 g~  266 (366)
                      +.
T Consensus        73 ~~   74 (317)
T CHL00194         73 TS   74 (317)
T ss_pred             CC
Confidence            53

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=94.19  E-value=0.42  Score=43.65  Aligned_cols=95  Identities=22%  Similarity=0.234  Sum_probs=59.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----CceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG----ADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .++.+||=+|||. |..+..+++ .|+ .|+++|.+++..+.+++..    ...-+.+..  .+.    .++.. ..+.|
T Consensus       130 ~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~--~da----e~l~~-~~~~F  199 (322)
T PLN02396        130 FEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYLC--TTA----EKLAD-EGRKF  199 (322)
T ss_pred             CCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEEe--cCH----HHhhh-ccCCC
Confidence            4677888899876 666777765 577 7999999999888876431    101111111  111    11111 14579


Q ss_pred             cEEEEc-----CCC-hHHHHHHHHhhcCCceEEEE
Q 017793          258 DVSFDC-----VGF-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~vld~-----~g~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+|+..     +.. ...+..+.+.|+|||.++..
T Consensus       200 D~Vi~~~vLeHv~d~~~~L~~l~r~LkPGG~liis  234 (322)
T PLN02396        200 DAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLS  234 (322)
T ss_pred             CEEEEhhHHHhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence            999752     222 34677888899999998865

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.18  E-value=0.64  Score=40.81  Aligned_cols=82  Identities=17%  Similarity=0.298  Sum_probs=48.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCcee-eecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|.+|...++.+...|. .|+.+.+++++.+.    +++.+.... +..+ ++...+...+.++.. ..+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            367899998 59999998888888899 57777777754432    233443321 1111 112222223332222 134


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999998874

>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]

Probab=94.16  E-value=0.18  Score=43.82  Aligned_cols=95  Identities=20%  Similarity=0.265  Sum_probs=60.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-Cceeee----cCCCCcchHHHHHHHHHhhCCCCc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADETAK----VSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      |.+||=.|||+ |+...-||+ +|+ .|.++|.+++..+.+++-. .+.+.+    |.-  +-....++..    ...||
T Consensus        90 g~~ilDvGCGg-GLLSepLAr-lga-~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l--~~~~~~~E~~----~~~fD  160 (282)
T KOG1270|consen   90 GMKILDVGCGG-GLLSEPLAR-LGA-QVTGIDASDDMVEVANEHKKMDPVLEGAIAYRL--EYEDTDVEGL----TGKFD  160 (282)
T ss_pred             CceEEEeccCc-cccchhhHh-hCC-eeEeecccHHHHHHHHHhhhcCchhccccceee--ehhhcchhhc----ccccc
Confidence            37788889887 889999998 588 7999999999888887642 111111    100  0001111122    34589


Q ss_pred             EEEEcC-----C-ChHHHHHHHHhhcCCceEEEEc
Q 017793          259 VSFDCV-----G-FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       259 ~vld~~-----g-~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .|+..-     - -.+..+.+++.|+|+|++++.-
T Consensus       161 aVvcsevleHV~dp~~~l~~l~~~lkP~G~lfitt  195 (282)
T KOG1270|consen  161 AVVCSEVLEHVKDPQEFLNCLSALLKPNGRLFITT  195 (282)
T ss_pred             eeeeHHHHHHHhCHHHHHHHHHHHhCCCCceEeee
Confidence            887532     1 1235667888999999987653

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=94.15  E-value=0.34  Score=40.11  Aligned_cols=93  Identities=24%  Similarity=0.304  Sum_probs=57.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ..++++||-+|+|. |..+..+++. +. .+++++.+++..+.+++    .+.... .+..   ++.+.   .    ...
T Consensus        17 ~~~~~~vLdlG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~---d~~~~---~----~~~   82 (179)
T TIGR00537        17 ELKPDDVLEIGAGT-GLVAIRLKGK-GK-CILTTDINPFAVKELRENAKLNNVGLD-VVMT---DLFKG---V----RGK   82 (179)
T ss_pred             hcCCCeEEEeCCCh-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHHcCCceE-EEEc---ccccc---c----CCc
Confidence            34567888888766 6677777764 44 79999999988776654    232211 1111   11111   1    246


Q ss_pred             CcEEEEcCCC---------------------------hHHHHHHHHhhcCCceEEEEc
Q 017793          257 IDVSFDCVGF---------------------------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       257 ~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +|+|+-+..-                           ...+..+.+.|+++|+++.+.
T Consensus        83 fD~Vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~  140 (179)
T TIGR00537        83 FDVILFNPPYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQ  140 (179)
T ss_pred             ccEEEECCCCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEE
Confidence            8998865321                           124666778999999988763

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PLN02928 oxidoreductase family protein

Probab=94.13  E-value=1.1  Score=41.59  Aligned_cols=100  Identities=18%  Similarity=0.275  Sum_probs=59.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .|.++.|+|.|.+|...++.++..|+ +|++.+++..+.. ...++.  ..+-.+...... ...+.++.    ...|+|
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~L~ell----~~aDiV  230 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGG-HEDIYEFA----GEADIV  230 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccCc-ccCHHHHH----hhCCEE
Confidence            47899999999999999999999999 7888877633211 111110  000000000000 11233332    358999


Q ss_pred             EEcCCChHH-----HHHHHHhhcCCceEEEEccc
Q 017793          261 FDCVGFDKT-----MSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       261 ld~~g~~~~-----~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +.+.+....     -...+..|+++..++-++..
T Consensus       231 vl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG  264 (347)
T PLN02928        231 VLCCTLTKETAGIVNDEFLSSMKKGALLVNIARG  264 (347)
T ss_pred             EECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence            888764221     12466788999888877643

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.12  E-value=0.73  Score=40.44  Aligned_cols=98  Identities=21%  Similarity=0.311  Sum_probs=63.4

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCC
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +.....++.+||-+|||. |..+..+++ .|. .++++|.+++..+.+++.... ..+.  .+..+       +. ....
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~--~d~~~-------~~-~~~~  102 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLA--GDIES-------LP-LATA  102 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEE--cCccc-------Cc-CCCC
Confidence            334445678899999876 766666665 466 799999999988888775421 1111  11111       10 1134


Q ss_pred             CCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793          256 GIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       256 ~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .||+|+....-      ...+..+.+.|+++|.++...
T Consensus       103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~  140 (251)
T PRK10258        103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTT  140 (251)
T ss_pred             cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            69999875421      245777888999999988764

>PRK12743 oxidoreductase; Provisional

Probab=94.11  E-value=0.44  Score=41.84  Aligned_cols=80  Identities=20%  Similarity=0.212  Sum_probs=46.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHH----HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLS----IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~----~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +.++||.| +|.+|...++.+...|++ |+.+ .++.++.+    .+++.+... .  .|. ++.......+.++.+. -
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDL-SDLPEGAQALDKLIQR-L   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHH-c
Confidence            46899998 689999999988889994 5544 44444432    223344322 1  122 2222333334444332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus        79 ~~id~li~~ag~   90 (256)
T PRK12743         79 GRIDVLVNNAGA   90 (256)
T ss_pred             CCCCEEEECCCC
Confidence            469999998874

>PRK06194 hypothetical protein; Provisional

Probab=94.11  E-value=0.62  Score=41.65  Aligned_cols=81  Identities=20%  Similarity=0.336  Sum_probs=48.3

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc---CCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.++||.| +|.+|...++.+...|+ .|+.++++.++.+. ..++   +... .+..+ ++..++.+.+..+.+ ..++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~g~   83 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE-RFGA   83 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence            57899998 69999998888888898 67777777655432 2222   3221 11111 122233333333322 2356


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            8999999875

>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional

Probab=94.09  E-value=0.36  Score=41.81  Aligned_cols=98  Identities=20%  Similarity=0.194  Sum_probs=61.3

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ....++.+||-+|+|. |..+..+++. ++ .+++++.+++..+.+++.    +...  .+..  .++....    ...+
T Consensus        44 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~~--~~~~--~~~~~~~----~~~~  112 (233)
T PRK05134         44 AGGLFGKRVLDVGCGG-GILSESMARL-GA-DVTGIDASEENIEVARLHALESGLKI--DYRQ--TTAEELA----AEHP  112 (233)
T ss_pred             ccCCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEcCCHHHHHHHHHHHHHcCCce--EEEe--cCHHHhh----hhcC
Confidence            3356788899999875 7777777774 66 699999998877766542    2211  1111  1222211    1124


Q ss_pred             CCCcEEEE-----cCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFD-----CVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld-----~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +.+|+|+.     +.+.. ..+..+.+.|+++|.++...
T Consensus       113 ~~fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~  151 (233)
T PRK05134        113 GQFDVVTCMEMLEHVPDPASFVRACAKLVKPGGLVFFST  151 (233)
T ss_pred             CCccEEEEhhHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence            67999964     33332 35677888999999987653

>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A

Probab=94.09  E-value=0.4  Score=38.49  Aligned_cols=98  Identities=20%  Similarity=0.392  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.+.+||=+|||. |.....+++..+ ...++++|.+++..+.+++    ++.+.+.-+..+..++...   +    ...
T Consensus         2 ~~~~~iLDlGcG~-G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~d~~~l~~~---~----~~~   73 (152)
T PF13847_consen    2 KSNKKILDLGCGT-GRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQGDIEDLPQE---L----EEK   73 (152)
T ss_dssp             TTTSEEEEET-TT-SHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEESBTTCGCGC---S----STT
T ss_pred             CCCCEEEEecCcC-cHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEEeehhccccc---c----CCC
Confidence            4677888888876 777788885442 2379999999998777765    5665322222221221110   0    157


Q ss_pred             CcEEEEcC-----CCh-HHHHHHHHhhcCCceEEEEc
Q 017793          257 IDVSFDCV-----GFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       257 ~d~vld~~-----g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ||+|+...     ... ..+..+.+.|+++|.++...
T Consensus        74 ~D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~  110 (152)
T PF13847_consen   74 FDIIISNGVLHHFPDPEKVLKNIIRLLKPGGILIISD  110 (152)
T ss_dssp             EEEEEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeEEEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence            99999863     222 46778889999999988653

...

>PRK07454 short chain dehydrogenase; Provisional

Probab=94.08  E-value=0.74  Score=39.93  Aligned_cols=82  Identities=18%  Similarity=0.241  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      ...++||.| +|.+|...+..+...|. +|+++++++++.+.+.    +.+... .+..+ ++.+++...+.++.+. -+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-FG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            456899998 69999998888888898 6888878776554332    222221 11111 2222333333333321 34


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.07  E-value=0.76  Score=41.05  Aligned_cols=85  Identities=15%  Similarity=0.221  Sum_probs=58.2

Q ss_pred             HHHHhCCCC-CCCEEEEECCCH-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          174 HACRRANVG-PETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       174 ~~l~~~~~~-~~~~vlI~G~g~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ..++..++. .|.+++|+|.|. +|.-+.+++...|+ .|.++.+..                     .+    +.+.  
T Consensus       147 ~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~~----l~~~--  198 (286)
T PRK14175        147 EILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------KD----MASY--  198 (286)
T ss_pred             HHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------hh----HHHH--
Confidence            344555433 689999999765 99999999999999 455554321                     11    1111  


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                        -+.+|+|+-++|.+..+..  +.++++..++.+|...
T Consensus       199 --~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        199 --LKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             --HhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence              1468999999998755444  4688888888887644

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.07  E-value=1.8  Score=38.87  Aligned_cols=82  Identities=17%  Similarity=0.143  Sum_probs=45.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh-HH----HHHHHcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RL----SIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~----~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...+..+...|+ .|+.+.++++ ..    +.++..+... .+..+ .+...+...+.++.+. .
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-~  122 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE-L  122 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            467899998 68999988887777898 5666655432 21    1222223322 11111 1222333333333322 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|++|.+.|.
T Consensus       123 ~~iD~lI~~Ag~  134 (290)
T PRK06701        123 GRLDILVNNAAF  134 (290)
T ss_pred             CCCCEEEECCcc
Confidence            468999998874

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.06  E-value=0.63  Score=40.57  Aligned_cols=82  Identities=22%  Similarity=0.274  Sum_probs=48.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc--CCc-eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL--GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l--g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++.++||.| +|.+|...++.+...|+ +|+.+.++.++.+. ..++  +.. ..+..+ ++.....+.+.++.+. .++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence            356899998 69999988887777898 67777777655432 2222  221 111111 1222333333333322 357


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.05  E-value=0.51  Score=38.23  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=48.9

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC--hhHHH-HH---HHcCCceeeecC---CCCcchHHHHHHHHHhhCC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQRLS-IA---RNLGADETAKVS---TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~-~~---~~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++||.| ++++|...++.+-..|..+++.+.++  .++.+ +.   +..+ ..+..+.   ++.++....+.++. ....
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   79 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVI-KRFG   79 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHH-HHHS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccccccccccc-cccc
Confidence            688998 69999887777776677678888777  33333 32   3334 3322221   22334444444443 2346


Q ss_pred             CCcEEEEcCCCh
Q 017793          256 GIDVSFDCVGFD  267 (366)
Q Consensus       256 ~~d~vld~~g~~  267 (366)
                      .+|++|.+.|..
T Consensus        80 ~ld~li~~ag~~   91 (167)
T PF00106_consen   80 PLDILINNAGIF   91 (167)
T ss_dssp             SESEEEEECSCT
T ss_pred             cccccccccccc
Confidence            799999998864

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.03  E-value=0.67  Score=40.71  Aligned_cols=81  Identities=23%  Similarity=0.318  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+.    +.+... .  .|. ++...+...+.++... .
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl-~d~~~i~~~~~~~~~~-~   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADV-ADEADIERLAEETLER-F   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence            468899998 69999998888888899 6777877776654433    222221 1  122 1222333333333321 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|.++.+.|.
T Consensus        88 ~~id~vi~~ag~   99 (259)
T PRK08213         88 GHVDILVNNAGA   99 (259)
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.00  E-value=0.56  Score=41.21  Aligned_cols=81  Identities=27%  Similarity=0.318  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce---eeecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE---TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|.+|.+.++.+...|+ .|+.+++++...+..+++   +.+.   ..|+ ++..+..+.+.++.+. -+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADL-ETYAGAQAAMAAAVEA-FG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeC-CCHHHHHHHHHHHHHH-cC
Confidence            357899998 69999998888888898 677777765433333333   3321   1232 2222333444443332 34


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        84 ~id~lv~nAg~   94 (260)
T PRK12823         84 RIDVLINNVGG   94 (260)
T ss_pred             CCeEEEECCcc
Confidence            79999999873

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=93.99  E-value=0.14  Score=46.06  Aligned_cols=91  Identities=18%  Similarity=0.254  Sum_probs=57.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.+||-+|||. |..++.+++. |. .|+++|.+++..+.+++    .+...-.. .   .+...    ..  ....+|
T Consensus       120 ~~~~vLDlGcG~-G~~~~~la~~-g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~-~---~D~~~----~~--~~~~fD  186 (287)
T PRK12335        120 KPGKALDLGCGQ-GRNSLYLALL-GF-DVTAVDINQQSLENLQEIAEKENLNIRTG-L---YDINS----AS--IQEEYD  186 (287)
T ss_pred             CCCCEEEeCCCC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHHHHcCCceEEE-E---echhc----cc--ccCCcc
Confidence            345899999876 7777777774 77 79999999987776654    23311110 0   11111    00  135799


Q ss_pred             EEEEcCC--------ChHHHHHHHHhhcCCceEEEE
Q 017793          259 VSFDCVG--------FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       259 ~vld~~g--------~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +|+.+.-        -...+..+.+.|+++|.++.+
T Consensus       187 ~I~~~~vl~~l~~~~~~~~l~~~~~~LkpgG~~l~v  222 (287)
T PRK12335        187 FILSTVVLMFLNRERIPAIIKNMQEHTNPGGYNLIV  222 (287)
T ss_pred             EEEEcchhhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            9987532        123566778889999996654

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=93.99  E-value=0.46  Score=40.84  Aligned_cols=33  Identities=27%  Similarity=0.436  Sum_probs=29.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      .+.|+|.|.|++|.+++..+.+.|+.++..++-
T Consensus        30 ~~~V~VvGiGGVGSw~veALaRsGig~itlID~   62 (263)
T COG1179          30 QAHVCVVGIGGVGSWAVEALARSGIGRITLIDM   62 (263)
T ss_pred             hCcEEEEecCchhHHHHHHHHHcCCCeEEEEec
Confidence            578999999999999999999999988887763

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=93.99  E-value=0.74  Score=40.36  Aligned_cols=81  Identities=20%  Similarity=0.231  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+.+++.  ..+.+++.+.+. .  .|. ++.++..+.+.++.+. -++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADL-IQQKDIDSIVSQAVEV-MGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCC-CCHHHHHHHHHHHHHH-cCC
Confidence            467899998 68999998888888999 5666655432  223344455332 1  222 2233444444444332 346


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        84 iD~lv~~ag~   93 (251)
T PRK12481         84 IDILINNAGI   93 (251)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PRK05875 short chain dehydrogenase; Provisional

Probab=93.99  E-value=0.67  Score=41.16  Aligned_cols=81  Identities=21%  Similarity=0.296  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcC----Ccee--e--ecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLG----ADET--A--KVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg----~~~~--~--~~~~~~~~~~~~~~~~~~~  252 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+.+.+++++.+. .+++.    ...+  +  |. .+..+....+++..+ 
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~-   82 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADV-TDEDQVARAVDAATA-   82 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCC-CCHHHHHHHHHHHHH-
Confidence            367899999 69999999998888899 67777777655432 22221    1111  1  22 122233333333322 


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                      ..+++|++|.+.|.
T Consensus        83 ~~~~~d~li~~ag~   96 (276)
T PRK05875         83 WHGRLHGVVHCAGG   96 (276)
T ss_pred             HcCCCCEEEECCCc
Confidence            13478999998873

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=93.98  E-value=0.54  Score=41.21  Aligned_cols=81  Identities=20%  Similarity=0.338  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TA--KVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...+..+...|+ .|+.+++++++.+.+    ++.+... .+  |. ++..++...+.++... -
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDI-ADEEAVAAAFARIDAE-H   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHh-c
Confidence            478899998 68999988887777899 678887776654322    2333221 11  22 2223344444444332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +.+|.++.+.|.
T Consensus        87 ~~id~vi~~ag~   98 (256)
T PRK06124         87 GRLDILVNNVGA   98 (256)
T ss_pred             CCCCEEEECCCC
Confidence            468999998874

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=93.97  E-value=0.23  Score=48.23  Aligned_cols=102  Identities=20%  Similarity=0.284  Sum_probs=65.2

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc--CCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL--GADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l--g~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +...++++.+||-+|+|. |..++.+++..+. .+++++.+++..+.+++.  +....+.+..  .++..    .. ...
T Consensus       260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~--~d~~~----~~-~~~  330 (475)
T PLN02336        260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV--ADCTK----KT-YPD  330 (475)
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE--cCccc----CC-CCC
Confidence            344567889999999876 6677888887787 799999998887777552  2111011100  11110    00 013


Q ss_pred             CCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..||+|+..-.     . ...+..+.+.|++||+++...
T Consensus       331 ~~fD~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~  369 (475)
T PLN02336        331 NSFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISD  369 (475)
T ss_pred             CCEEEEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            46999986321     1 346788899999999988754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=93.97  E-value=0.53  Score=41.13  Aligned_cols=78  Identities=19%  Similarity=0.278  Sum_probs=48.8

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-e--eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +++|.| +|.+|.+.+..+...|+ +|+.+++++++.+.+.. ++... .  .|. ++..++.+.+.++.+. .+++|.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~i~~~~~~~~~~-~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDV-RNRAAIEEMLASLPAE-WRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence            689998 69999998888888898 67888888776654433 34321 1  122 1222333333333221 3479999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +.+.|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            998864

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=93.95  E-value=2.5  Score=36.29  Aligned_cols=115  Identities=10%  Similarity=-0.013  Sum_probs=61.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC--hhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.+|||.|+|.++.-=+..+...|+ .|.++...  ++=.+++ +.+.-..+   .  ..+...  .     -.++++|
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~-~~~~i~~~---~--r~~~~~--d-----l~g~~LV   89 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLK-KYGNLKLI---K--GNYDKE--F-----IKDKHLI   89 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHH-hCCCEEEE---e--CCCChH--H-----hCCCcEE
Confidence            46799999999999887777777898 55555332  2222222 22221111   1  122111  1     2479999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhc-CcEEEEee
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR-EVDVIGIF  311 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~  311 (366)
                      |.|.+.++.-.......+..+.++.....+....+....+..+ .+.+.-+.
T Consensus        90 iaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST  141 (223)
T PRK05562         90 VIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT  141 (223)
T ss_pred             EECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence            9999977544444444455566655443333333333333222 34444443

>PRK05854 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.69  Score=42.15  Aligned_cols=81  Identities=15%  Similarity=0.204  Sum_probs=47.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc----CCcee----eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL----GADET----AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~~----~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.+++|.| ++++|.+.++.+...|+ +|+.+.+++++.+. ++++    +...+    .|+ .+..+..+...++.+ 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl-~d~~sv~~~~~~~~~-   89 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDL-SSLASVAALGEQLRA-   89 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecC-CCHHHHHHHHHHHHH-
Confidence            367899998 68999998887777898 67777677665432 2222    11111    222 122223333333322 


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                      ..+.+|+++.+.|.
T Consensus        90 ~~~~iD~li~nAG~  103 (313)
T PRK05854         90 EGRPIHLLINNAGV  103 (313)
T ss_pred             hCCCccEEEECCcc
Confidence            23579999998874

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=93.94  E-value=0.16  Score=38.55  Aligned_cols=95  Identities=23%  Similarity=0.311  Sum_probs=57.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      |.+||-.|+|. |..++.+++.. ...+++++.+++..+.++.    .+.+ .+..+.   .++.+....   .....+|
T Consensus         1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~---~D~~~~~~~---~~~~~~D   72 (117)
T PF13659_consen    1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV---GDARDLPEP---LPDGKFD   72 (117)
T ss_dssp             TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE---SHHHHHHHT---CTTT-EE
T ss_pred             CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE---Cchhhchhh---ccCceeE
Confidence            56788887654 66666666665 4589999999998887765    2321 111111   233222211   1257899


Q ss_pred             EEEEcCCCh--------------HHHHHHHHhhcCCceEEEE
Q 017793          259 VSFDCVGFD--------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       259 ~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      +|+-+..-.              ..+..+.+.|+++|.++.+
T Consensus        73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~  114 (117)
T PF13659_consen   73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI  114 (117)
T ss_dssp             EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            998754321              3467888999999998765

...

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.93  E-value=0.68  Score=40.05  Aligned_cols=81  Identities=22%  Similarity=0.298  Sum_probs=50.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...++.+...|. .|+.+.+++++.+.+    ++.+....   .|. .+...+...+.++... -
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDV-SDEAAVRALIEAAVEA-F   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence            356899998 69999999988888899 578887877664432    23343221   122 2223334444443321 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      ..+|.++.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            468999998865

>PRK08264 short chain dehydrogenase; Validated

Probab=93.93  E-value=0.52  Score=40.78  Aligned_cols=78  Identities=21%  Similarity=0.290  Sum_probs=46.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+.++||.| +|.+|...++.+...|.++|+.+.++.++.+.   .+... .....+-.+.. .+.++.+. -..+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~-~~~~~D~~~~~-~~~~~~~~-~~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRV-VPLQLDVTDPA-SVAAAAEA-ASDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCce-EEEEecCCCHH-HHHHHHHh-cCCCCEEE
Confidence            457899998 69999998888888898567777777665432   22221 11111111111 22222221 24589999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            99886

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.92  E-value=0.67  Score=41.26  Aligned_cols=82  Identities=24%  Similarity=0.327  Sum_probs=47.6

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCCh---hHHH-HHHHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRLS-IARNLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.|+   +++|.+.++.+...|+ +|+.+.+++   ++.+ +.++++....+..+ ++.++..+.+.++.+. -
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK-W   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-c
Confidence            4678999985   5899998888878899 566665553   2322 22344532222111 2223344444443322 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +.+|+++.+.|.
T Consensus        87 g~iD~lv~nAG~   98 (272)
T PRK08159         87 GKLDFVVHAIGF   98 (272)
T ss_pred             CCCcEEEECCcc
Confidence            479999999863

>KOG3010 consensus Methyltransferase [General function prediction only]

Probab=93.92  E-value=0.11  Score=44.53  Aligned_cols=102  Identities=16%  Similarity=0.167  Sum_probs=61.4

Q ss_pred             CCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          179 ANVGPETNVMI-MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       179 ~~~~~~~~vlI-~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +...++.++++ .|+|. |++++-++-.  .+.||++|.+++-++.+++.......+  +...-....+..+.. +...+
T Consensus        28 a~~~~~h~~a~DvG~G~-Gqa~~~iae~--~k~VIatD~s~~mL~~a~k~~~~~y~~--t~~~ms~~~~v~L~g-~e~SV  101 (261)
T KOG3010|consen   28 ASRTEGHRLAWDVGTGN-GQAARGIAEH--YKEVIATDVSEAMLKVAKKHPPVTYCH--TPSTMSSDEMVDLLG-GEESV  101 (261)
T ss_pred             HhhCCCcceEEEeccCC-CcchHHHHHh--hhhheeecCCHHHHHHhhcCCCccccc--CCccccccccccccC-CCcce
Confidence            55677777544 47776 7888888876  457999999999999988754333221  111111111122221 24567


Q ss_pred             cEEEEcCC-----ChHHHHHHHHhhcCCceEEEE
Q 017793          258 DVSFDCVG-----FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~vld~~g-----~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+|+.+-.     -+...+.+-+.|++.|.++.+
T Consensus       102 DlI~~Aqa~HWFdle~fy~~~~rvLRk~Gg~iav  135 (261)
T KOG3010|consen  102 DLITAAQAVHWFDLERFYKEAYRVLRKDGGLIAV  135 (261)
T ss_pred             eeehhhhhHHhhchHHHHHHHHHHcCCCCCEEEE
Confidence            88765322     134667788899888855543

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=93.91  E-value=0.82  Score=40.59  Aligned_cols=86  Identities=15%  Similarity=0.259  Sum_probs=54.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHC--CCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +|.|+|+|.+|...++.....  +.+.+.+++++.++.+.+ ++++...   +    .++    .++.    ..+|+|++
T Consensus         3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~---~----~~~----~ell----~~~DvVvi   67 (265)
T PRK13304          3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA---C----LSI----DELV----EDVDLVVE   67 (265)
T ss_pred             EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee---E----CCH----HHHh----cCCCEEEE
Confidence            688999999998776665544  454455677777665543 4444321   1    122    2221    35899999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEE
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |.+...+.+.....|..+-.++..
T Consensus        68 ~a~~~~~~~~~~~al~~Gk~Vvv~   91 (265)
T PRK13304         68 CASVNAVEEVVPKSLENGKDVIIM   91 (265)
T ss_pred             cCChHHHHHHHHHHHHcCCCEEEE
Confidence            988776667777777765555443

>PRK09291 short chain dehydrogenase; Provisional

Probab=93.91  E-value=0.39  Score=42.10  Aligned_cols=77  Identities=18%  Similarity=0.222  Sum_probs=46.1

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      +.++||.| +|.+|...++.+...|+ .|+++.+++++.+.+.    ..+..... +..+-.+.. .+....   ..++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~-~~~~~~---~~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRV-EKLDLTDAI-DRAQAA---EWDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceE-EEeeCCCHH-HHHHHh---cCCCC
Confidence            35799998 69999999999888998 6777767665544332    22322111 111112221 222221   34799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      ++|.+.|.
T Consensus        76 ~vi~~ag~   83 (257)
T PRK09291         76 VLLNNAGI   83 (257)
T ss_pred             EEEECCCc
Confidence            99999873

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=93.90  E-value=0.7  Score=41.02  Aligned_cols=88  Identities=18%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|.|+|+|.+|...++..... +.+.+.++............++.. +..+    .+    +.++    ...+|+|++|.
T Consensus         3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~----~d----~~~l----~~~~DvVve~t   69 (265)
T PRK13303          3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVV----SS----VDAL----PQRPDLVVECA   69 (265)
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-Ceee----CC----HHHh----ccCCCEEEECC
Confidence            689999999998877766654 453333333322222222223211 1111    11    1122    24689999999


Q ss_pred             CChHHHHHHHHhhcCCceEEEE
Q 017793          265 GFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       265 g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +...+.+....+|..|-.++..
T Consensus        70 ~~~~~~e~~~~aL~aGk~Vvi~   91 (265)
T PRK13303         70 GHAALKEHVVPILKAGIDCAVI   91 (265)
T ss_pred             CHHHHHHHHHHHHHcCCCEEEe
Confidence            9887878888888887666653

>PRK12746 short chain dehydrogenase; Provisional

Probab=93.90  E-value=1.8  Score=37.70  Aligned_cols=82  Identities=22%  Similarity=0.289  Sum_probs=46.1

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHc---CCce-ee--ecCCCCcchHHHHHHHHHhh--
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TA--KVSTDIEDVDTDVGKIQNAM--  253 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~--~~~~~~~~~~~~~~~~~~~~--  253 (366)
                      +.+++|.| +|.+|...++.+...|...++...++.++.+ .+.++   +... .+  |. ++..++...+.++....  
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADL-NSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCc-CCHHHHHHHHHHHHHHhcc
Confidence            57899998 6999999888887789843333455555433 22222   2211 11  22 12223333333332211  


Q ss_pred             ---CCCCcEEEEcCCC
Q 017793          254 ---GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ---~~~~d~vld~~g~  266 (366)
                         ..++|++|.+.|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence               1469999998875

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=93.89  E-value=0.72  Score=41.11  Aligned_cols=88  Identities=17%  Similarity=0.154  Sum_probs=56.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--CCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARA--FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~--~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      -+|.|+|+|.+|....+.+..  -+.+.+.+.++++++.+ ++++++.....      .++    .++.    ...|+|+
T Consensus         7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~------~~~----eell----~~~D~Vv   72 (271)
T PRK13302          7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV------VPL----DQLA----THADIVV   72 (271)
T ss_pred             eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc------CCH----HHHh----cCCCEEE
Confidence            578999999999876666554  36644445667766654 45556632211      122    2222    2479999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEE
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .|.+...+.+.....|+.+-.++..
T Consensus        73 i~tp~~~h~e~~~~aL~aGk~Vi~~   97 (271)
T PRK13302         73 EAAPASVLRAIVEPVLAAGKKAIVL   97 (271)
T ss_pred             ECCCcHHHHHHHHHHHHcCCcEEEe
Confidence            9999887777777788777666543

>PRK08263 short chain dehydrogenase; Provisional

Probab=93.88  E-value=0.6  Score=41.52  Aligned_cols=81  Identities=23%  Similarity=0.218  Sum_probs=48.3

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-eeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +.++||.| +|.+|...++.+...|. .|+.+++++++.+.+.+ ++... .+..+ ++..++...+.++.. .-+++|.
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE-HFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            35799998 69999988888777898 67777777766554433 32211 11111 122233333333322 1347899


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999875

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=93.87  E-value=1.1  Score=41.78  Aligned_cols=45  Identities=16%  Similarity=0.197  Sum_probs=34.6

Q ss_pred             HHHHhCCC-CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          174 HACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       174 ~~l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      .+++.... -+|.+|.|.|.|.+|+.+++.+...|+ ++++++-++.
T Consensus       196 ~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g  241 (411)
T COG0334         196 EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG  241 (411)
T ss_pred             HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence            44444443 379999999999999999999998899 5666654444

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=93.86  E-value=1.3  Score=40.71  Aligned_cols=94  Identities=21%  Similarity=0.238  Sum_probs=60.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HCCCCeEEEEcCChhHHH-HHHHc----CCceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNL----GADETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +...+++|+|+|..|.+.+..+. ..+++++.+..++.++.+ +++++    +.+ +..+    .+..+.+        .
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~  193 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S  193 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence            45578999999999977766665 578778888888887765 44444    322 1111    1222221        4


Q ss_pred             CCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc
Q 017793          256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       256 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      .+|+|+.|.+....+ ...+.++++-.+..+|..
T Consensus       194 ~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~~  226 (326)
T TIGR02992       194 GADIIVTTTPSETPI-LHAEWLEPGQHVTAMGSD  226 (326)
T ss_pred             cCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCCC
Confidence            699999998764311 122467888888778744

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK07074 short chain dehydrogenase; Provisional

Probab=93.85  E-value=0.64  Score=40.78  Aligned_cols=81  Identities=22%  Similarity=0.322  Sum_probs=47.7

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCcee--eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET--AKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      +.++||.| +|.+|...+..+...|+ .|+.++++.++.+. .+++....+  +..+ .+...+...+.+... .-+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAA-ERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCC
Confidence            45799998 58999988887777898 67777777766543 333321111  1111 111222233333322 124699


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=93.84  E-value=1.8  Score=33.66  Aligned_cols=95  Identities=17%  Similarity=0.262  Sum_probs=55.6

Q ss_pred             EEEEC-CCHHHHHHHHHHHHCC--CCeEEEEcCCh--hH-HHHHHHcCCceeeecCCCCcchHHHHHHHH----------
Q 017793          187 VMIMG-SGPIGLVTLLAARAFG--APRIIITDVDV--QR-LSIARNLGADETAKVSTDIEDVDTDVGKIQ----------  250 (366)
Q Consensus       187 vlI~G-~g~vG~~ai~la~~~g--~~~vv~v~~~~--~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~----------  250 (366)
                      |.|.| +|++|..++.+.+...  + +|++.....  +. .+++++|.+..+...+.   .....+++..          
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~   76 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL   76 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence            57889 6999999999999886  5 455553332  22 34667788776655332   1122222211          


Q ss_pred             -------Hhh-CCCCcEEEEcCCChHHHHHHHHhhcCCceEEE
Q 017793          251 -------NAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       251 -------~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~  285 (366)
                             +.. ...+|+|+.++.+-..+...+..++.+=++.+
T Consensus        77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence                   111 25688888887777677777777776655443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=93.84  E-value=0.2  Score=45.03  Aligned_cols=42  Identities=29%  Similarity=0.381  Sum_probs=36.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      .+.+++|+|+|++|.+++..+...|+.++..++++.+|.+.+
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            467899999999999999999999998899999988877644

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=93.83  E-value=1.8  Score=41.25  Aligned_cols=34  Identities=24%  Similarity=0.481  Sum_probs=29.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEE-EEcCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRII-ITDVD  217 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv-~v~~~  217 (366)
                      .|.+|+|.|.|.+|..+++.+...|+ +|+ +.|++
T Consensus       236 ~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~~  270 (454)
T PTZ00079        236 EGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDSD  270 (454)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcCC
Confidence            68899999999999999999999999 566 55555

>PRK07035 short chain dehydrogenase; Provisional

Probab=93.79  E-value=0.79  Score=40.04  Aligned_cols=80  Identities=15%  Similarity=0.254  Sum_probs=49.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-ee--ecCCCCcchHHHHHHHHHhhCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TA--KVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ ++   .+... .+  |+ .+..+....+.+..+. -+
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~   84 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHI-GEMEQIDALFAHIRER-HG   84 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHHHHHHHHHHHHH-cC
Confidence            56899998 69999999988888898 688887776654433 22   23211 11  22 2222333333333322 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|+++.+.|.
T Consensus        85 ~id~li~~ag~   95 (252)
T PRK07035         85 RLDILVNNAAA   95 (252)
T ss_pred             CCCEEEECCCc
Confidence            69999998873

>PRK07063 short chain dehydrogenase; Provisional

Probab=93.78  E-value=0.73  Score=40.50  Aligned_cols=81  Identities=23%  Similarity=0.278  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC----cee----eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA----DET----AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~----~~~----~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+ +++..    ..+    .|. ++..++...+.++.+.
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADV-TDAASVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC-CCHHHHHHHHHHHHHH
Confidence            367899998 68999998888888899 677777777655433 22211    111    122 2223333444443332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+.+|+++.+.|.
T Consensus        84 -~g~id~li~~ag~   96 (260)
T PRK07063         84 -FGPLDVLVNNAGI   96 (260)
T ss_pred             -hCCCcEEEECCCc
Confidence             3479999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=93.77  E-value=0.76  Score=40.90  Aligned_cols=81  Identities=19%  Similarity=0.262  Sum_probs=48.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHH---cCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.+++|.| +|++|.+.++.+...|+ .|+.+++++++.+. .++   .+... .+..+ .+..+....+.++... -+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            367899998 69999998888888899 67777777655432 222   23221 11111 1122233333333221 25


Q ss_pred             CCcEEEEcCC
Q 017793          256 GIDVSFDCVG  265 (366)
Q Consensus       256 ~~d~vld~~g  265 (366)
                      .+|+++.+.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=93.75  E-value=0.88  Score=42.49  Aligned_cols=34  Identities=24%  Similarity=0.484  Sum_probs=30.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|||.|+|++|..+++.+.+.|+..+..+|.+
T Consensus        41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            5789999999999999999999999888888754

>KOG3201 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.75  E-value=0.27  Score=39.42  Aligned_cols=113  Identities=17%  Similarity=0.201  Sum_probs=73.0

Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-------CCceeeecCCCCcchH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-------GADETAKVSTDIEDVD  243 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-------g~~~~~~~~~~~~~~~  243 (366)
                      .||..++.-+.=.|.+|+-.|+|-.|++.+.+|...--..|..++.+++..+-+++.       +.+.+....     +.
T Consensus        17 la~~~l~~~n~~rg~~ilelgggft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~vlr-----w~   91 (201)
T KOG3201|consen   17 LAWTILRDPNKIRGRRILELGGGFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCCVLR-----WL   91 (201)
T ss_pred             HHHHHHhchhHHhHHHHHHhcCchhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceehhhH-----HH
Confidence            466667654444567888899999999999999988777899999999877766553       222221110     10


Q ss_pred             HHHHHHHHhhCCCCcEEEE--cCCCh----HHHHHHHHhhcCCceEEEEccc
Q 017793          244 TDVGKIQNAMGSGIDVSFD--CVGFD----KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld--~~g~~----~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      ..-.+. ......||+++.  |.-..    +.+..++.+|+|.|+-+.+...
T Consensus        92 ~~~aqs-q~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~Al~fsPR  142 (201)
T KOG3201|consen   92 IWGAQS-QQEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGRALLFSPR  142 (201)
T ss_pred             HhhhHH-HHhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcccceeEecCc
Confidence            000011 112468999975  44333    3566677889999997666433

>PRK07985 oxidoreductase; Provisional

Probab=93.74  E-value=1.8  Score=38.97  Aligned_cols=104  Identities=15%  Similarity=0.166  Sum_probs=59.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC--hhHHHHH----HHcCCce-e--eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+.++  .++.+.+    ++.+... .  .|. ++.++..+.+.++.+.
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDL-SDEKFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccC-CCHHHHHHHHHHHHHH
Confidence            457899998 68999998888888899 56665433  2222222    2333321 1  122 2223333444443332


Q ss_pred             hCCCCcEEEEcCCCh--------------------------HHHHHHHHhhcCCceEEEEccc
Q 017793          253 MGSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       253 ~~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                       -+++|+++.+.|..                          ...+.+...+..+|+++.++..
T Consensus       126 -~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~  187 (294)
T PRK07985        126 -LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI  187 (294)
T ss_pred             -hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence             35799999987631                          0222344455677888887643

>PRK14968 putative methyltransferase; Provisional

Probab=93.74  E-value=1  Score=37.37  Aligned_cols=42  Identities=24%  Similarity=0.499  Sum_probs=32.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR  225 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  225 (366)
                      ..+++++|..|+|. |..+..+++. +. .+++++.+++..+.++
T Consensus        21 ~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~   62 (188)
T PRK14968         21 DKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAK   62 (188)
T ss_pred             ccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHH
Confidence            36788999998765 6677788876 65 7999999988776654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=93.74  E-value=0.75  Score=40.38  Aligned_cols=81  Identities=12%  Similarity=0.189  Sum_probs=47.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH----cCCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN----LGADETAKVS---TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~~~~~~---~~~~~~~~~~~~~~~~~~  254 (366)
                      +.++||.| +|.+|...+..+...|+ .++.++++.++.+.+ .+    .+...+..+.   ++..+....+.++... -
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            46799998 68999988888888898 677777776554322 22    2212222111   1222333333333322 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (259)
T PRK12384         80 GRVDLLVYNAGI   91 (259)
T ss_pred             CCCCEEEECCCc
Confidence            579999999874

>PRK06179 short chain dehydrogenase; Provisional

Probab=93.74  E-value=0.36  Score=42.74  Aligned_cols=78  Identities=24%  Similarity=0.271  Sum_probs=48.4

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      +.+++|.| +|.+|...++.+...|+ .|++++++.++.+...  +... ..|+ ++..++...+..+.+. -+.+|++|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~~d~li   78 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDV-TDDASVQAAVDEVIAR-AGRIDVLV   78 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeec-CCHHHHHHHHHHHHHh-CCCCCEEE
Confidence            46799998 69999988888777898 6777777665543211  2221 1222 2333444444444332 34699999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      .+.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99985

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.73  E-value=0.75  Score=40.70  Aligned_cols=80  Identities=15%  Similarity=0.203  Sum_probs=46.3

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCcee--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADET--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.|++   ++|.+.++.+...|+ .|+.++++++..+.++++    +....  .|. ++..+..+.+.++.+. 
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~-   81 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDV-AEDASIDAMFAELGKV-   81 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCC-CCHHHHHHHHHHHHhh-
Confidence            46789999853   799987777777898 566666653222233332    21111  222 2233444444444332 


Q ss_pred             CCCCcEEEEcCC
Q 017793          254 GSGIDVSFDCVG  265 (366)
Q Consensus       254 ~~~~d~vld~~g  265 (366)
                      -+.+|+++++.|
T Consensus        82 ~g~iD~linnAg   93 (262)
T PRK07984         82 WPKFDGFVHSIG   93 (262)
T ss_pred             cCCCCEEEECCc
Confidence            246999999987

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=93.73  E-value=2.1  Score=36.66  Aligned_cols=107  Identities=20%  Similarity=0.216  Sum_probs=66.8

Q ss_pred             CCCCEEEEEC-C--CHHHHHHHHHHHHCCCCeEEEEcCChh---H-HHHHHHcCCceeeecCC-CCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQ---R-LSIARNLGADETAKVST-DIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~~---~-~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~  253 (366)
                      -.|.+.||.| +  -+++.-..+.++..|++ .+.+--.++   | .+++++++.+.++..+- +.+...+.-.++. ..
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe-L~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~-~~   81 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAE-LAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIK-KK   81 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCE-EEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH-Hh
Confidence            3689999998 5  47888888999999995 444433332   2 35667788766544332 2233333322332 23


Q ss_pred             CCCCcEEEEcCCCh-----------------------------HHHHHHHHhhcCCceEEEEcccC
Q 017793          254 GSGIDVSFDCVGFD-----------------------------KTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       254 ~~~~d~vld~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      .+++|.++.|++..                             +....+...|.+||-++.+...+
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlg  147 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLG  147 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEecc
Confidence            56899999888653                             13344556778889888765433

>PRK06141 ornithine cyclodeaminase; Validated

Probab=93.72  E-value=2.3  Score=38.76  Aligned_cols=97  Identities=15%  Similarity=0.183  Sum_probs=59.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHH-HCCCCeEEEEcCChhHHH-HHHHcCCc--eeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      -+...+++|+|+|..|...+..+. ..+...|.+.++++++.+ +++++...  .+...    .+.    .+.    -..
T Consensus       122 ~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~----~~~----~~a----v~~  189 (314)
T PRK06141        122 RKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVV----TDL----EAA----VRQ  189 (314)
T ss_pred             CCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEe----CCH----HHH----Hhc
Confidence            356788999999999988875444 467778888888888755 44444211  11111    111    111    146


Q ss_pred             CcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       257 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +|+|+.+.+....+ .-.+.++++-.+..+|...
T Consensus       190 aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~~  222 (314)
T PRK06141        190 ADIISCATLSTEPL-VRGEWLKPGTHLDLVGNFT  222 (314)
T ss_pred             CCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCCC
Confidence            99999988765221 1125678887766676443

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.71  E-value=0.56  Score=47.11  Aligned_cols=93  Identities=15%  Similarity=0.185  Sum_probs=64.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      .++|+|.|.|.+|+...+.++..|. .+++++.++++.+.+++.|...++- +..++   +.   +.+.+-..+|.++-+
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~~---~~---L~~agi~~A~~vvv~  471 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-DATRM---DL---LESAGAAKAEVLINA  471 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-eCCCH---HH---HHhcCCCcCCEEEEE
Confidence            3679999999999999999999998 6999999999999999988654322 22111   12   222245679999999


Q ss_pred             CCChHHHHH---HHHhhcCCceEE
Q 017793          264 VGFDKTMST---ALNATRPGGKVC  284 (366)
Q Consensus       264 ~g~~~~~~~---~~~~l~~~G~~v  284 (366)
                      .+.++.-..   ..+.+.|+-+++
T Consensus       472 ~~d~~~n~~i~~~ar~~~p~~~ii  495 (621)
T PRK03562        472 IDDPQTSLQLVELVKEHFPHLQII  495 (621)
T ss_pred             eCCHHHHHHHHHHHHHhCCCCeEE
Confidence            987543222   233344554443

>PRK11579 putative oxidoreductase; Provisional

Probab=93.71  E-value=2.7  Score=38.88  Aligned_cols=130  Identities=15%  Similarity=0.111  Sum_probs=73.9

Q ss_pred             CEEEEECCCHHHH-HHHH-HHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGL-VTLL-AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~-~ai~-la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      =+|.|+|+|.+|. .... +.+.-+++.+.+++.++++..  ++++....  |    .++.    ++.+  ...+|+|+.
T Consensus         5 irvgiiG~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~--~----~~~~----ell~--~~~vD~V~I   70 (346)
T PRK11579          5 IRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSDATKVK--ADWPTVTV--V----SEPQ----HLFN--DPNIDLIVI   70 (346)
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHH--hhCCCCce--e----CCHH----HHhc--CCCCCEEEE
Confidence            3789999999986 3344 444446744455565555432  33432211  1    1332    2332  357999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEe--eccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGI--FRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  329 (366)
                      |++...+...+..+|..|=. +++.-+.....-...    ..-..++.+.-.  ..+...++.+-+++++|.+
T Consensus        71 ~tp~~~H~~~~~~al~aGkh-Vl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~i  142 (346)
T PRK11579         71 PTPNDTHFPLAKAALEAGKH-VVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVL  142 (346)
T ss_pred             cCCcHHHHHHHHHHHHCCCe-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCC
Confidence            99998888899888877544 455422211111111    112233333322  2335678889999999887

>PRK08226 short chain dehydrogenase; Provisional

Probab=93.69  E-value=0.85  Score=40.14  Aligned_cols=81  Identities=22%  Similarity=0.299  Sum_probs=49.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce-e--eecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-T--AKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.++++++..+.++++   +... .  .|+ ++..+....+.++... .+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~-~~   81 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADV-RDPASVAAAIKRAKEK-EG   81 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCC-CCHHHHHHHHHHHHHH-cC
Confidence            367899998 69999998888888899 678887776544433332   3221 1  122 1222333333333322 35


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (263)
T PRK08226         82 RIDILVNNAGV   92 (263)
T ss_pred             CCCEEEECCCc
Confidence            69999998884

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=93.69  E-value=0.85  Score=39.91  Aligned_cols=82  Identities=27%  Similarity=0.471  Sum_probs=49.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc---CCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|++|...++.+...|+ .++.+++++++.+. ..++   +... .+..+ .+...+.+.+.++.+ ..+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK-DIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH-hcC
Confidence            367899998 68999998888888898 67777777665432 2222   3221 11111 222233333333332 235


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK11761 cysM cysteine synthase B; Provisional

Probab=93.67  E-value=2.8  Score=37.84  Aligned_cols=60  Identities=22%  Similarity=0.283  Sum_probs=45.4

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceeee
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAK  234 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~  234 (366)
                      +.+...++++++|+...+|..|++....|+.+|.+.++.+.  .+++|.+.++.+|++.+..
T Consensus        54 a~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~  115 (296)
T PRK11761         54 AEKRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILV  115 (296)
T ss_pred             HHHcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEe
Confidence            33456667788776666899999999999999997666664  3457888999999876543

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.67  E-value=0.69  Score=43.62  Aligned_cols=34  Identities=32%  Similarity=0.521  Sum_probs=29.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|||+|+|++|..++..+.+.|...+..+|.+
T Consensus        42 ~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         42 NARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             cCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            5689999999999999999999999888888643

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.65  E-value=0.63  Score=40.46  Aligned_cols=81  Identities=20%  Similarity=0.220  Sum_probs=46.7

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHH---HcCCcee---eecCCCCcchHHHHHHHHHhhCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIAR---NLGADET---AKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~---~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +.++||.| +|.+|...++.+...|++.++...+++. +.+.++   +.+....   .|. .+..+..+.+.++.+. .+
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNV-GDWDSTKAAFDKVKAE-VG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHH-hC
Confidence            56789998 6999999888888889953433433332 323333   3343322   122 2223333334443332 35


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        81 ~id~li~~ag~   91 (246)
T PRK12938         81 EIDVLVNNAGI   91 (246)
T ss_pred             CCCEEEECCCC
Confidence            79999999875

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=93.65  E-value=0.86  Score=39.84  Aligned_cols=81  Identities=25%  Similarity=0.401  Sum_probs=49.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...++.+...|. .|+.+++++++.+.+ .++   +... .  .|. .+..+..+.+..+... .
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~   79 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDV-TDEEAINAGIDYAVET-F   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHH-c
Confidence            357899998 69999998888777898 677777777654432 222   3221 1  122 2223333333333322 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|++|.+.+.
T Consensus        80 ~~~d~vi~~a~~   91 (258)
T PRK12429         80 GGVDILVNNAGI   91 (258)
T ss_pred             CCCCEEEECCCC
Confidence            479999998863

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=93.65  E-value=0.86  Score=40.02  Aligned_cols=82  Identities=21%  Similarity=0.195  Sum_probs=48.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH---HHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|++|...++.+...|+ .++.+.++++..+   .+.+.+... .+..+ ++.......+.++.+. .++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence            468999998 68999998888888899 5666655532112   223334321 11111 2223333344444332 357


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=93.64  E-value=0.64  Score=37.28  Aligned_cols=105  Identities=25%  Similarity=0.283  Sum_probs=58.3

Q ss_pred             EEEEECCCHHHHHHHHHHHH-CCCCeEEEEc-CChhHHHHHHH----cCCc-eeeecCCC----Cc---ch--HHHHHHH
Q 017793          186 NVMIMGSGPIGLVTLLAARA-FGAPRIIITD-VDVQRLSIARN----LGAD-ETAKVSTD----IE---DV--DTDVGKI  249 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~-~~~~~~~~~~~----lg~~-~~~~~~~~----~~---~~--~~~~~~~  249 (366)
                      +|.|+|.|.+|...++.+.. .+++.+.+.+ .+.+...++-+    .|.- ..+.....    +.   .+  .....++
T Consensus         2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~   81 (149)
T smart00846        2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL   81 (149)
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence            58899999999988887774 4664444455 34555555543    2210 00000000    00   00  0111112


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                      .+ ...++|+|+||.|.-...+.+..+|..|.+-+.++.+..
T Consensus        82 ~w-~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~  122 (149)
T smart00846       82 PW-KELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAK  122 (149)
T ss_pred             cc-cccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCC
Confidence            11 245899999998864455666678888877777765543

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=93.64  E-value=0.88  Score=39.57  Aligned_cols=82  Identities=22%  Similarity=0.322  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecCC-CCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVST-DIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|.+|...++.+...|. .|+.++++.++...+.    +.+... .+..+- +.....+.+..+.+. -+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            367899998 69999998888888898 6777777766544332    222221 112111 122333333333321 34


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|++|.+.|.
T Consensus        80 ~~d~vi~~ag~   90 (250)
T TIGR03206        80 PVDVLVNNAGW   90 (250)
T ss_pred             CCCEEEECCCC
Confidence            78999999873

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06482 short chain dehydrogenase; Provisional

Probab=93.63  E-value=0.85  Score=40.50  Aligned_cols=79  Identities=24%  Similarity=0.186  Sum_probs=48.3

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-e--eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .++||.| +|.+|...++.+...|. .|+++.+++++.+.+++ ++... .  .|. ++.....+.+.++.+ ...++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~~~~id~   79 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDV-TDSAAVRAVVDRAFA-ALGRIDV   79 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccC-CCHHHHHHHHHHHHH-HcCCCCE
Confidence            4789998 69999998887777898 67777788776655543 22211 1  121 112223333333222 1357899


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (276)
T PRK06482         80 VVSNAGY   86 (276)
T ss_pred             EEECCCC
Confidence            9999874

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=93.63  E-value=1.2  Score=36.06  Aligned_cols=88  Identities=17%  Similarity=0.189  Sum_probs=55.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      ++.+|.|+|-|.-|.+-.+-+|-.|.+.+++........+.+++-|....        +..+.+        ...|+|+-
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~--------~~~eAv--------~~aDvV~~   66 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM--------SVAEAV--------KKADVVML   66 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC--------EHHHHH--------HC-SEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec--------cHHHHH--------hhCCEEEE
Confidence            46899999988889999999999999777777666668888898887531        222222        25899998


Q ss_pred             cCCChH---HH-HHHHHhhcCCceEEEE
Q 017793          263 CVGFDK---TM-STALNATRPGGKVCLI  286 (366)
Q Consensus       263 ~~g~~~---~~-~~~~~~l~~~G~~v~~  286 (366)
                      .++...   .+ +.....|+++-.+++.
T Consensus        67 L~PD~~q~~vy~~~I~p~l~~G~~L~fa   94 (165)
T PF07991_consen   67 LLPDEVQPEVYEEEIAPNLKPGATLVFA   94 (165)
T ss_dssp             -S-HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred             eCChHHHHHHHHHHHHhhCCCCCEEEeC
Confidence            887431   22 3444577888776653

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK05876 short chain dehydrogenase; Provisional

Probab=93.63  E-value=0.59  Score=41.67  Aligned_cols=81  Identities=28%  Similarity=0.349  Sum_probs=49.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+++++++.+. .++   .+... .  .|. ++..++.+.+.+..+. -
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~   81 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDV-RHREEVTHLADEAFRL-L   81 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCC-CCHHHHHHHHHHHHHH-c
Confidence            367899998 69999998888888899 57777777655442 222   23321 1  122 2223333333333322 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +.+|+++.+.|.
T Consensus        82 g~id~li~nAg~   93 (275)
T PRK05876         82 GHVDVVFSNAGI   93 (275)
T ss_pred             CCCCEEEECCCc
Confidence            469999999874

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.61  E-value=2  Score=39.53  Aligned_cols=88  Identities=19%  Similarity=0.171  Sum_probs=57.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|....+.++..|. +|++.+++.+.....    .    .+.   .+    +.++.    ...|+|+.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~~---~~----l~ell----~~aDiVil  204 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TYK---DS----VKEAI----KDADIISL  204 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hcc---CC----HHHHH----hcCCEEEE
Confidence            46789999999999999999999999 788888776542210    0    010   12    22222    36899998


Q ss_pred             cCCChHH-----HHHHHHhhcCCceEEEEcccC
Q 017793          263 CVGFDKT-----MSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       263 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +++....     -...+..|+++..++.++...
T Consensus       205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~  237 (330)
T PRK12480        205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA  237 (330)
T ss_pred             eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence            8876431     223556778888777765433

>PLN03013 cysteine synthase

Probab=93.59  E-value=2.7  Score=39.94  Aligned_cols=57  Identities=19%  Similarity=0.336  Sum_probs=44.3

Q ss_pred             HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceee
Q 017793          177 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETA  233 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~  233 (366)
                      +++.+++|.+.+|.. +|..|++....++.+|.+.++++.  .++++.+.++.+|++.+.
T Consensus       167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~  226 (429)
T PLN03013        167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL  226 (429)
T ss_pred             HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence            556778886666665 799999999999999996555553  356788899999987654

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.59  E-value=0.45  Score=42.56  Aligned_cols=84  Identities=14%  Similarity=0.202  Sum_probs=56.9

Q ss_pred             HHHhCCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          175 ACRRANV-GPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       175 ~l~~~~~-~~~~~vlI~G~g~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .++..++ -.|.+++|+|+|. +|....+++...|+ .|..+.+..+                     +    +.+.   
T Consensus       149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~----L~~~---  199 (283)
T PRK14192        149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------N----LPEL---  199 (283)
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------h----HHHH---
Confidence            3444443 4688999999876 99999999999999 6666643111                     1    1111   


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                       -..+|+++.++|.+..+.  .+.++++..++.+|...
T Consensus       200 -~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~  234 (283)
T PRK14192        200 -VKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             -hccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence             146899999998665332  35688888888887544

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=93.59  E-value=1.1  Score=40.79  Aligned_cols=88  Identities=19%  Similarity=0.197  Sum_probs=61.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE-E
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS-F  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v-l  261 (366)
                      .|.+|.|+|.|.+|+...+-++..| ..+....+...+.+...+.++..        .++.+.+        ...|++ +
T Consensus       161 ~gK~vgilG~G~IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~--------~d~~~~~--------~~sD~ivv  223 (336)
T KOG0069|consen  161 EGKTVGILGLGRIGKAIAKRLKPFG-CVILYHSRTQLPPEEAYEYYAEF--------VDIEELL--------ANSDVIVV  223 (336)
T ss_pred             cCCEEEEecCcHHHHHHHHhhhhcc-ceeeeecccCCchhhHHHhcccc--------cCHHHHH--------hhCCEEEE
Confidence            5789999999999999999999988 57777777777777766666641        1222222        245665 5


Q ss_pred             EcCCChHHHH----HHHHhhcCCceEEEEc
Q 017793          262 DCVGFDKTMS----TALNATRPGGKVCLIG  287 (366)
Q Consensus       262 d~~g~~~~~~----~~~~~l~~~G~~v~~g  287 (366)
                      +|..++.+.+    ..+..|++++.++-++
T Consensus       224 ~~pLt~~T~~liNk~~~~~mk~g~vlVN~a  253 (336)
T KOG0069|consen  224 NCPLTKETRHLINKKFIEKMKDGAVLVNTA  253 (336)
T ss_pred             ecCCCHHHHHHhhHHHHHhcCCCeEEEecc
Confidence            5655554332    3667889998877654

>TIGR00452 methyltransferase, putative

Probab=93.58  E-value=0.96  Score=41.15  Aligned_cols=100  Identities=16%  Similarity=0.148  Sum_probs=61.0

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH---HHHHc-CCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNL-GADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ......+|++||-+|||. |..+..+++. |+..|++++.++.-..   .++++ +....+.+..  .+    +.++.. 
T Consensus       115 ~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~--~~----ie~lp~-  185 (314)
T TIGR00452       115 PHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP--LG----IEQLHE-  185 (314)
T ss_pred             HhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE--CC----HHHCCC-
Confidence            344567789999999887 7777777764 7767999999886433   23332 2111111101  11    112211 


Q ss_pred             hCCCCcEEEEcC-----CC-hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ...||+|+..-     .. ...+..+.+.|++||++++.
T Consensus       186 -~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle  224 (314)
T TIGR00452       186 -LYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE  224 (314)
T ss_pred             -CCCcCEEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence             23699997542     12 25788888999999999864

Known examples to date are restricted to the proteobacteria.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=93.56  E-value=1  Score=38.05  Aligned_cols=92  Identities=20%  Similarity=0.180  Sum_probs=55.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-------------------hH----HHHHHHcCCceeeecCCCCc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-------------------QR----LSIARNLGADETAKVSTDIE  240 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-------------------~~----~~~~~~lg~~~~~~~~~~~~  240 (366)
                      ..+|+|.|+|++|...+..+-..|+..+..+|.+.                   .|    .+.++++..+..+.....  
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~--   98 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD--   98 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec--
Confidence            57899999999999999999999998888886442                   01    223455555443322111  


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCc
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG  281 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G  281 (366)
                      .+.+...+.    -.++|+|++|..........-+.+...+
T Consensus        99 ~~~~~~~~~----~~~~dvVi~~~~~~~~~~~ln~~c~~~~  135 (197)
T cd01492          99 DISEKPEEF----FSQFDVVVATELSRAELVKINELCRKLG  135 (197)
T ss_pred             CccccHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcC
Confidence            111111112    2579999999876544333334444333

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=93.56  E-value=0.79  Score=38.26  Aligned_cols=75  Identities=24%  Similarity=0.279  Sum_probs=43.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh-----------C
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-----------G  254 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-----------~  254 (366)
                      +|-|+|.|=+|+.....+...|. .|++++.++++.+.+.+ |-..+     .++...+.+++....+           -
T Consensus         2 ~I~ViGlGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~~-g~~p~-----~E~~l~~ll~~~~~~~~l~~t~~~~~ai   74 (185)
T PF03721_consen    2 KIAVIGLGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALNN-GELPI-----YEPGLDELLKENVSAGRLRATTDIEEAI   74 (185)
T ss_dssp             EEEEE--STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHHT-TSSSS------CTTHHHHHHHHHHTTSEEEESEHHHHH
T ss_pred             EEEEECCCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHhh-ccccc-----cccchhhhhccccccccchhhhhhhhhh
Confidence            68899999999887777777898 89999999999888765 32111     1244444444433100           1


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      ...|++|-|++++
T Consensus        75 ~~adv~~I~VpTP   87 (185)
T PF03721_consen   75 KDADVVFICVPTP   87 (185)
T ss_dssp             HH-SEEEE----E
T ss_pred             hccceEEEecCCC
Confidence            3589999999876

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.56  E-value=0.071  Score=42.80  Aligned_cols=94  Identities=15%  Similarity=0.179  Sum_probs=53.9

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec----CCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV----STDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      |+|+|+|++|......++..|. .|..+.+.+ +.+.+++-|......-    ..........     ......+|++|-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv   73 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV   73 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence            6899999999887777766888 677776766 7777776554221110    0000000000     012468999999


Q ss_pred             cCCChH---HHHHHHHhhcCCceEEEEc
Q 017793          263 CVGFDK---TMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~~~---~~~~~~~~l~~~G~~v~~g  287 (366)
                      |+-...   .++.+...+.++..++.+.
T Consensus        74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~q  101 (151)
T PF02558_consen   74 AVKAYQLEQALQSLKPYLDPNTTIVSLQ  101 (151)
T ss_dssp             -SSGGGHHHHHHHHCTGEETTEEEEEES
T ss_pred             EecccchHHHHHHHhhccCCCcEEEEEe
Confidence            986543   3333444455666676664

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK09242 tropinone reductase; Provisional

Probab=93.55  E-value=0.97  Score=39.63  Aligned_cols=81  Identities=25%  Similarity=0.312  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc-----CCce-e--eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GADE-T--AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~~-~--~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ .++     +... .  .|+ .+..+....+.++...
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADV-SDDEDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCC-CCHHHHHHHHHHHHHH
Confidence            367899998 68999999888888899 677777777655433 222     2211 1  122 1222333333333332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+++|+++.+.|.
T Consensus        86 -~g~id~li~~ag~   98 (257)
T PRK09242         86 -WDGLHILVNNAGG   98 (257)
T ss_pred             -cCCCCEEEECCCC
Confidence             3579999999985

>PRK07411 hypothetical protein; Validated

Probab=93.54  E-value=0.67  Score=43.65  Aligned_cols=34  Identities=38%  Similarity=0.515  Sum_probs=30.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|||.|+|++|..+++.+.+.|+.++..+|.+
T Consensus        38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999888888643

>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase

Probab=93.53  E-value=0.87  Score=38.30  Aligned_cols=98  Identities=14%  Similarity=0.146  Sum_probs=61.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ...++|-+|+|. |..+..+++......+++++.+++..+.+++    .+...+....   .+.........  ....+|
T Consensus        16 ~~~~ilDiGcG~-G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i~---~d~~~~~~~~~--~~~~~d   89 (194)
T TIGR00091        16 KAPLHLEIGCGK-GRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGLKNLHVLC---GDANELLDKFF--PDGSLS   89 (194)
T ss_pred             CCceEEEeCCCc-cHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEEc---cCHHHHHHhhC--CCCcee
Confidence            345677789887 8889999987654479999999987665533    3333222111   22222222111  123588


Q ss_pred             EEEEcCCC--------------hHHHHHHHHhhcCCceEEEE
Q 017793          259 VSFDCVGF--------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       259 ~vld~~g~--------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .++-..+.              ...+..+.+.|+++|.+...
T Consensus        90 ~v~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~LkpgG~l~~~  131 (194)
T TIGR00091        90 KVFLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKGGVIHFK  131 (194)
T ss_pred             EEEEECCCcCCCCCccccccCCHHHHHHHHHHhCCCCEEEEE
Confidence            88765443              24678889999999998765

In E. coli, this protein flanks the DNA repair protein MutY, also called micA.

>PRK06720 hypothetical protein; Provisional

Probab=93.52  E-value=1.5  Score=36.06  Aligned_cols=82  Identities=27%  Similarity=0.320  Sum_probs=47.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HH---HcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-AR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++..++|.| ++++|...+..+...|+ .|+.+++++++.+. ++   +.+... .+..+ ++..++.+.+.+..+. -+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            467889998 57899988887777898 67777777654432 22   234322 12211 1122333333333221 34


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|+++.+.|.
T Consensus        93 ~iDilVnnAG~  103 (169)
T PRK06720         93 RIDMLFQNAGL  103 (169)
T ss_pred             CCCEEEECCCc
Confidence            68999998874

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=93.52  E-value=0.66  Score=43.85  Aligned_cols=38  Identities=21%  Similarity=0.417  Sum_probs=30.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL  221 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~  221 (366)
                      .+.+++|.| +|++|.+.++.+...|+ +|+++++++++.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l  215 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKI  215 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence            367999998 69999998888777898 677777766654

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=93.51  E-value=0.87  Score=40.02  Aligned_cols=88  Identities=10%  Similarity=0.046  Sum_probs=53.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC---CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF---GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~---g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+|.|+|+|.+|...++....-   +++.+.+.++..++.+.+.+. +..   +    .+    +.++.   ....|+|+
T Consensus         3 ~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~-~~~---~----~~----l~~ll---~~~~DlVV   67 (267)
T PRK13301          3 HRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR-VAL---L----DG----LPGLL---AWRPDLVV   67 (267)
T ss_pred             eEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc-Ccc---c----CC----HHHHh---hcCCCEEE
Confidence            4788999999999887766542   254444555555454433221 111   1    11    22221   35688999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ||.+.....+.....|..+-.++..+
T Consensus        68 E~A~~~av~e~~~~iL~~g~dlvv~S   93 (267)
T PRK13301         68 EAAGQQAIAEHAEGCLTAGLDMIICS   93 (267)
T ss_pred             ECCCHHHHHHHHHHHHhcCCCEEEEC
Confidence            99887777777777777776666554

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=93.51  E-value=1.2  Score=44.26  Aligned_cols=75  Identities=12%  Similarity=0.122  Sum_probs=55.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +.++|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...+.- +..  + .+.+++   .+-..+|.++-++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~--~-~~~L~~---a~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAA--N-EEIMQL---AHLDCARWLLLTI  489 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCC--C-HHHHHh---cCccccCEEEEEc
Confidence            678999999999999999999998 6999999999999999887655432 111  1 222322   2345789888777


Q ss_pred             CCh
Q 017793          265 GFD  267 (366)
Q Consensus       265 g~~  267 (366)
                      +.+
T Consensus       490 ~~~  492 (558)
T PRK10669        490 PNG  492 (558)
T ss_pred             CCh
Confidence            654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=93.49  E-value=0.62  Score=40.65  Aligned_cols=79  Identities=23%  Similarity=0.374  Sum_probs=48.7

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-e--eecCCCCcchHHHHHHHHHhhCCC
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-T--AKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .++||.| +|.+|...+..+...|. .|+++++++++.+.+.+    .+... .  .|. .+.+++...+.++.+. ..+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~   78 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADV-TKEDEIADMIAAAAAE-FGG   78 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-CCHHHHHHHHHHHHHh-cCC
Confidence            4799998 69999998888888898 68888787766554432    22221 1  122 2223333434344322 346


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|++|.+.+.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999988764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=93.47  E-value=0.91  Score=39.12  Aligned_cols=100  Identities=11%  Similarity=0.122  Sum_probs=62.1

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc---------------eeeecCCCCcch
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD---------------ETAKVSTDIEDV  242 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~---------------~~~~~~~~~~~~  242 (366)
                      ....++.+|||-|||. |.-++-||. .|. .|++++-++...+.+.+ .+..               .+-.+.   .|+
T Consensus        39 l~~~~~~rvLvPgCGk-g~D~~~LA~-~G~-~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~---gD~  112 (226)
T PRK13256         39 LNINDSSVCLIPMCGC-SIDMLFFLS-KGV-KVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYV---ADI  112 (226)
T ss_pred             cCCCCCCeEEEeCCCC-hHHHHHHHh-CCC-cEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEE---ccC
Confidence            4445678999999987 777777777 598 69999999988776533 2211               110000   111


Q ss_pred             HHHHHHHHH--hhCCCCcEEEEcCCC----h----HHHHHHHHhhcCCceEEEEcc
Q 017793          243 DTDVGKIQN--AMGSGIDVSFDCVGF----D----KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       243 ~~~~~~~~~--~~~~~~d~vld~~g~----~----~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      -+    +..  ...+.+|.|+|..--    +    .-...+.+.|+++|+++++..
T Consensus       113 f~----l~~~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~  164 (226)
T PRK13256        113 FN----LPKIANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM  164 (226)
T ss_pred             cC----CCccccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence            11    100  012469999995421    1    245567778999999887653

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.46  E-value=2.1  Score=38.70  Aligned_cols=43  Identities=14%  Similarity=0.158  Sum_probs=34.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  229 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  229 (366)
                      +|.|+|.|.+|.....-+...|. .|++.++++++.+.+.+.+.
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~   44 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT   44 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence            58889999999877776666787 67778899988887776554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=93.46  E-value=1.1  Score=35.89  Aligned_cols=96  Identities=20%  Similarity=0.260  Sum_probs=60.4

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH-----hhCCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-----AMGSGI  257 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  257 (366)
                      ..+|+|+| -|++|.+.++.-|..+. -|..++.++...       +|.-|.. ..+.+|.++-..+.+     ..+.++
T Consensus         3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-------Ad~sI~V-~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-------ADSSILV-DGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-------ccceEEe-cCCcchhHHHHHHHHHHHHhhccccc
Confidence            35799997 59999999999999988 677776654321       2222211 122344333332221     236789


Q ss_pred             cEEEEcCCChH--------------------------HHHHHHHhhcCCceEEEEcc
Q 017793          258 DVSFDCVGFDK--------------------------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       258 d~vld~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~  288 (366)
                      |.||+-.|+-+                          ....+-.+|++||-+-+.|.
T Consensus        74 Dav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGA  130 (236)
T KOG4022|consen   74 DAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGA  130 (236)
T ss_pred             ceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccc
Confidence            99999877631                          12234457899998888764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=93.43  E-value=0.99  Score=39.54  Aligned_cols=82  Identities=13%  Similarity=0.183  Sum_probs=49.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++.++.  ..+.+++++... .+..+ .+.++..+.+.++.+. .+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence            367899998 68999999998888899 5676655432  223334444221 11111 2223344444444332 3479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++.+.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=93.43  E-value=0.99  Score=39.56  Aligned_cols=81  Identities=23%  Similarity=0.366  Sum_probs=50.3

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce-eeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+. +++... .+..+ .+..+....+.++.+. .+.+|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            56899998 69999998888888899 6788878777654433 343221 11111 2223333444443332 346999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++.+.|.
T Consensus        84 li~~ag~   90 (257)
T PRK07067         84 LFNNAAL   90 (257)
T ss_pred             EEECCCc
Confidence            9998763

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=93.42  E-value=0.8  Score=37.70  Aligned_cols=94  Identities=19%  Similarity=0.256  Sum_probs=58.4

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|.|+| +|-+|...++=|+..|- .|.++.++++|....+..-.-     ..+--+..+. ..    .-.|+|+||++.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~-----q~Difd~~~~-a~----~l~g~DaVIsA~   70 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTIL-----QKDIFDLTSL-AS----DLAGHDAVISAF   70 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceee-----cccccChhhh-Hh----hhcCCceEEEec
Confidence            578888 69999999999999998 577777888887543222111     1111111111 11    136899999999


Q ss_pred             CCh--H-------HHHHHHHhhcCC--ceEEEEcccC
Q 017793          265 GFD--K-------TMSTALNATRPG--GKVCLIGLAK  290 (366)
Q Consensus       265 g~~--~-------~~~~~~~~l~~~--G~~v~~g~~~  290 (366)
                      +..  +       ..+.++..|+..  -|+..+|..+
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            875  1       233355566653  3777777544

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=93.42  E-value=0.96  Score=39.08  Aligned_cols=83  Identities=17%  Similarity=0.250  Sum_probs=56.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH--HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR--NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +++|.|+|.+|...++.+...|. .|+.++.++++.+...  ++....+.- +...   .+.   +.+.+-..+|+++-+
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~g-d~t~---~~~---L~~agi~~aD~vva~   73 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIG-DATD---EDV---LEEAGIDDADAVVAA   73 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEe-cCCC---HHH---HHhcCCCcCCEEEEe
Confidence            57899999999999999999998 6888889998876633  355443322 2211   223   333456789999999


Q ss_pred             CCChHHHHHHHHhh
Q 017793          264 VGFDKTMSTALNAT  277 (366)
Q Consensus       264 ~g~~~~~~~~~~~l  277 (366)
                      .|.. -.+..+-.+
T Consensus        74 t~~d-~~N~i~~~l   86 (225)
T COG0569          74 TGND-EVNSVLALL   86 (225)
T ss_pred             eCCC-HHHHHHHHH
Confidence            9975 344433333

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.41  E-value=0.4  Score=43.01  Aligned_cols=43  Identities=21%  Similarity=0.362  Sum_probs=36.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR  225 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  225 (366)
                      .+.++||+|+|+.+.+++.-+...|+.++.+++++.+|.+.+.
T Consensus       126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            4678999999999999888888899988888888888766543

>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]

Probab=93.41  E-value=1.3  Score=41.17  Aligned_cols=104  Identities=21%  Similarity=0.273  Sum_probs=63.1

Q ss_pred             HhCCCCCCCEEEEECC--CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ...+.++|++||=.-|  |+--....|++...|. .|++++.+++|.+.+    +.+|...+.....+...+.....   
T Consensus       150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~---  225 (355)
T COG0144         150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLP---  225 (355)
T ss_pred             HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccccccccccc---
Confidence            4567899999998743  4433333333333344 579999999987765    45888754333333222221110   


Q ss_pred             HhhCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          251 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       251 ~~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                        .+..||-|+-   |+|..                         ..+..++..|++||+++..
T Consensus       226 --~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYS  287 (355)
T COG0144         226 --GGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYS  287 (355)
T ss_pred             --ccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence              1224888854   55543                         3667788999999998763

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.37  E-value=0.76  Score=41.13  Aligned_cols=87  Identities=20%  Similarity=0.203  Sum_probs=54.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|.|+|.|.+|......++..|. .|.+.++++++.+.+.+.|.-...   .  .+. +    .    -..+|+||-|+.
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~--~~~-~----~----~~~aDlVilavp   66 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S--TDL-S----L----LKDCDLVILALP   66 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c--CCH-h----H----hcCCCEEEEcCC
Confidence            58899999999877777777787 789999999888888777642110   1  111 1    1    145899999988


Q ss_pred             ChHHH---HHHHHhhcCCceEEEEc
Q 017793          266 FDKTM---STALNATRPGGKVCLIG  287 (366)
Q Consensus       266 ~~~~~---~~~~~~l~~~G~~v~~g  287 (366)
                      .....   ......+.++..+..++
T Consensus        67 ~~~~~~~~~~l~~~l~~~~ii~d~~   91 (279)
T PRK07417         67 IGLLLPPSEQLIPALPPEAIVTDVG   91 (279)
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEeCc
Confidence            54322   22333344444444443

>PRK07856 short chain dehydrogenase; Provisional

Probab=93.35  E-value=0.77  Score=40.16  Aligned_cols=78  Identities=22%  Similarity=0.201  Sum_probs=47.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.++||.| +|++|...++.+...|+ .|+.+++++++    ...+.. ..+..+ .+..+....+.++.+. -+.+|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            468899998 68999998888888898 67777776654    112211 111111 1222333333333322 346899


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      +|.+.|.
T Consensus        79 vi~~ag~   85 (252)
T PRK07856         79 LVNNAGG   85 (252)
T ss_pred             EEECCCC
Confidence            9998874

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.31  E-value=1.1  Score=39.34  Aligned_cols=80  Identities=21%  Similarity=0.312  Sum_probs=47.9

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee-eecC-CCCcchHHHHHHHHHhhCCCC
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .++||.| +|.+|...++.+...|. .|+.+++++++.+.+    +..+.... +..+ .+...+...+.+.... -+++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i   79 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGGI   79 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence            5789998 59999999988888898 688887776654322    22333211 1111 1222333333333221 2469


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++.+.|.
T Consensus        80 d~vi~~ag~   88 (263)
T PRK06181         80 DILVNNAGI   88 (263)
T ss_pred             CEEEECCCc
Confidence            999999864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=93.29  E-value=0.86  Score=39.48  Aligned_cols=82  Identities=22%  Similarity=0.281  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.++||.| +|.+|...++.+...|. .|+..+++.++.+.+ ..++... .+..+ ++...+...+.++.. .-+++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEA-DLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence            367899998 69999998888887898 677776666655433 3344321 11111 122233333333322 135799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      .++.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.28  E-value=2.9  Score=36.28  Aligned_cols=105  Identities=14%  Similarity=0.202  Sum_probs=58.1

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHH-H---HHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-S---IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~---~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.++||.| +|.+|...++-+...|++.++...++.+.. +   .+++.+... .+..+ ++..+....+.++... -.+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cCC
Confidence            57899998 689999888877788985334343333322 2   223333321 11111 1222333333333322 247


Q ss_pred             CcEEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          257 IDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       257 ~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +|.+|.+.|..          +               ..+.+.+.++..|+++.++..
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~  142 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV  142 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence            99999999731          1               123345556677899888753

>PRK06153 hypothetical protein; Provisional

Probab=93.25  E-value=0.38  Score=44.60  Aligned_cols=34  Identities=24%  Similarity=0.220  Sum_probs=29.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      +.+|+|.|+|++|...+..+-+.|..+++.+|.+
T Consensus       176 ~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D  209 (393)
T PRK06153        176 GQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD  209 (393)
T ss_pred             hCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence            5789999999999999888888999888888643

>PRK06101 short chain dehydrogenase; Provisional

Probab=93.24  E-value=0.66  Score=40.28  Aligned_cols=42  Identities=24%  Similarity=0.228  Sum_probs=32.1

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  227 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  227 (366)
                      .++||.| +|++|...+..+...|+ .|+.+++++++.+.+.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence            4689998 69999887777777898 688888888777655543

>PRK07577 short chain dehydrogenase; Provisional

Probab=93.24  E-value=0.54  Score=40.52  Aligned_cols=74  Identities=20%  Similarity=0.343  Sum_probs=45.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      +.++||.| +|.+|...++.+...|. .|+.+.++.++     .+.... ..|. .+...+...+.++.+  ..++|++|
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~-~~~~~~~~~~~~~~~--~~~~d~vi   73 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDL-ADIEQTAATLAQINE--IHPVDAIV   73 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeC-CCHHHHHHHHHHHHH--hCCCcEEE
Confidence            56899998 69999998888888898 67777666544     111111 1222 222333344444433  23689999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      .+.|.
T Consensus        74 ~~ag~   78 (234)
T PRK07577         74 NNVGI   78 (234)
T ss_pred             ECCCC
Confidence            98874

>PRK06197 short chain dehydrogenase; Provisional

Probab=93.24  E-value=0.92  Score=41.06  Aligned_cols=82  Identities=17%  Similarity=0.277  Sum_probs=47.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc----CCcee--eecC-CCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL----GADET--AKVS-TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~~--~~~~-~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|...++.+...|+ .|+.+.++.++.+. .+++    +...+  +..+ .+.++..+.+.++.+. 
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA-   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence            467899998 69999988887777898 67777677665432 2222    11111  1111 1222333333333321 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|++|.+.|.
T Consensus        93 ~~~iD~li~nAg~  105 (306)
T PRK06197         93 YPRIDLLINNAGV  105 (306)
T ss_pred             CCCCCEEEECCcc
Confidence            3469999999873

>PRK06114 short chain dehydrogenase; Provisional

Probab=93.17  E-value=1.2  Score=39.03  Aligned_cols=82  Identities=15%  Similarity=0.248  Sum_probs=48.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh-H-HHHHH---HcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-R-LSIAR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| ++++|.+.++.+...|+ .++.++++++ . .+.++   +.+... .+..+ .+..+....+.++... -
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            367899998 68999999888888899 5666665543 2 22222   233221 11111 2223334444443332 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +.+|+++.+.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            569999999874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=93.16  E-value=2.2  Score=37.12  Aligned_cols=77  Identities=21%  Similarity=0.210  Sum_probs=45.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ++.++||.| +|.+|...++.+...|. +++.++++.     +...+... .+..+ .+...+.+.+.++.. ..+.+|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLA-ETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            357899998 68999998888887898 677776654     22222211 11111 122233333333332 1356999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9999875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.16  E-value=0.99  Score=39.29  Aligned_cols=83  Identities=17%  Similarity=0.164  Sum_probs=47.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|.+|...+..+...|++.++...++.++.+.    +++.+... .+..+ ++..+....+.+.... -+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-FG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            457899998 69999998888888898544434555544322    22234322 11111 2223333334344332 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999998874

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.16  E-value=0.83  Score=40.12  Aligned_cols=82  Identities=18%  Similarity=0.225  Sum_probs=45.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|.+|...++.+...|++.++...++.++.+ ..++   .+... .  .|. ++.....+.+.+..+. .
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~-~   85 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADL-ADEAEVRALVARASAA-L   85 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHHHHHHHHHHHHH-c
Confidence            456899998 6899998888887889844444444444332 2222   23321 1  122 1222333333333222 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus        86 ~~iD~vi~~ag~   97 (258)
T PRK09134         86 GPITLLVNNASL   97 (258)
T ss_pred             CCCCEEEECCcC
Confidence            479999999874

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.16  E-value=2.9  Score=36.05  Aligned_cols=82  Identities=22%  Similarity=0.286  Sum_probs=45.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HH---HHcCCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IA---RNLGADE-TA--KVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|.+|...+..+...|++.++...+.+++.+ ..   +..+... .+  |. .+...+.+.++++.+. -
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDV-SDAESVERAVDEAKAE-F   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHHHHH-c
Confidence            356899998 6999999999888889953344443333222 22   2223221 11  22 1122233333333221 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      .++|.++.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            468999998874

>PLN02256 arogenate dehydrogenase

Probab=93.12  E-value=1.6  Score=39.60  Aligned_cols=90  Identities=18%  Similarity=0.158  Sum_probs=54.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ..+.+|.|+|.|.+|...+..++..|. .|++++.++. .+.++++|...   +    .+..+    +.   ....|+|+
T Consensus        34 ~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~----~~~~e----~~---~~~aDvVi   97 (304)
T PLN02256         34 SRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---F----RDPDD----FC---EEHPDVVL   97 (304)
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---e----CCHHH----Hh---hCCCCEEE
Confidence            355789999999999988888887787 6778877764 35556666531   1    11111    11   13478888


Q ss_pred             EcCCChHHHHHHHHh-----hcCCceEEEEcc
Q 017793          262 DCVGFDKTMSTALNA-----TRPGGKVCLIGL  288 (366)
Q Consensus       262 d~~g~~~~~~~~~~~-----l~~~G~~v~~g~  288 (366)
                      -|+.... ....+..     +.++..++.++.
T Consensus        98 lavp~~~-~~~vl~~l~~~~l~~~~iviDv~S  128 (304)
T PLN02256         98 LCTSILS-TEAVLRSLPLQRLKRSTLFVDVLS  128 (304)
T ss_pred             EecCHHH-HHHHHHhhhhhccCCCCEEEecCC
Confidence            8877542 2332222     345555555543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=93.11  E-value=1.4  Score=39.18  Aligned_cols=96  Identities=15%  Similarity=0.217  Sum_probs=57.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ..+.+++|+|+|++|.+++..+...|. .+.++++++++.+ +++++... ..... .    .    .+.   ....+|+
T Consensus       115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-~----~----~~~---~~~~~Di  181 (270)
T TIGR00507       115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-S----M----DEL---PLHRVDL  181 (270)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-c----h----hhh---cccCccE
Confidence            457889999999999988888877887 7777778777654 44443321 01111 0    0    011   1246899


Q ss_pred             EEEcCCChH--HH---HHHHHhhcCCceEEEEcccC
Q 017793          260 SFDCVGFDK--TM---STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       260 vld~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~  290 (366)
                      |++|++..-  ..   ......++++..++.+...+
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p  217 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP  217 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence            999998531  01   11234567777776665443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=93.11  E-value=0.94  Score=42.11  Aligned_cols=97  Identities=20%  Similarity=0.256  Sum_probs=62.3

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHC--CCCeEEEEc--CChhH-HHHHHHcCCceeeecCCCCcchHHHHHHHH--------
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAF--GAPRIIITD--VDVQR-LSIARNLGADETAKVSTDIEDVDTDVGKIQ--------  250 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~--g~~~vv~v~--~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~--------  250 (366)
                      .+|.|+| +|++|..++.+.+..  .+ +++++.  ++.++ .+++++++...+...+.   .....++...        
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~---~~~~~l~~~l~~~~~~v~   77 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE---EAAKELKEALAAAGIEVL   77 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHhhccCCceEE
Confidence            4789999 799999999988765  45 455553  34443 35667788876654321   1111122110        


Q ss_pred             -------Hh-hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEE
Q 017793          251 -------NA-MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       251 -------~~-~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~  285 (366)
                             +. ....+|+|+.++++...+...+..++.|-++.+
T Consensus        78 ~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         78 AGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             EChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence                   00 123589999999987777888888887777665

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=93.11  E-value=1.2  Score=41.24  Aligned_cols=99  Identities=15%  Similarity=0.017  Sum_probs=55.6

Q ss_pred             EEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHH-HHHcCCceeee-------cCCCCcchHHHHHHHHHhhCCC
Q 017793          186 NVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSI-ARNLGADETAK-------VSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +|.|.|+|.+|+..++.+.. -+++.+.+.+.+++.... ++..|.+....       +....-.......++    -.+
T Consensus         3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el----~~~   78 (341)
T PRK04207          3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDL----LEK   78 (341)
T ss_pred             EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHh----hcc
Confidence            68899999999988887764 356445555545444443 44444331100       000000000111222    146


Q ss_pred             CcEEEEcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793          257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       257 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +|+|+||.+...+....-.+++.|-+++..+.
T Consensus        79 vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~  110 (341)
T PRK04207         79 ADIVVDATPGGVGAKNKELYEKAGVKAIFQGG  110 (341)
T ss_pred             CCEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence            99999999987666666666776655555543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=93.11  E-value=0.69  Score=40.21  Aligned_cols=95  Identities=24%  Similarity=0.343  Sum_probs=62.3

Q ss_pred             CHHHHHHHHHHHHCCCCeEEEEcCChhH-----HHHHHHcCCceeeecCC-CCcchHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          193 GPIGLVTLLAARAFGAPRIIITDVDVQR-----LSIARNLGADETAKVST-DIEDVDTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       193 g~vG~~ai~la~~~g~~~vv~v~~~~~~-----~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      +++|.+.++-+...|+ +|+.++++.++     .++.++.+.+ ++..+- +.++....+.++.+..++.+|+++.+.+.
T Consensus         6 ~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~   83 (241)
T PF13561_consen    6 SGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI   83 (241)
T ss_dssp             SHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred             CChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence            7999999999889999 78888888876     2344556654 433332 33444444455554444789999887643


Q ss_pred             h-----------------------------HHHHHHHHhhcCCceEEEEccc
Q 017793          267 D-----------------------------KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       267 ~-----------------------------~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      .                             ...+.+.+.++++|.++.++..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~  135 (241)
T PF13561_consen   84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSI  135 (241)
T ss_dssp             CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEG
T ss_pred             cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccch
Confidence            2                             1334455677888998887643

...

>PRK08223 hypothetical protein; Validated

Probab=93.06  E-value=0.92  Score=40.53  Aligned_cols=34  Identities=32%  Similarity=0.549  Sum_probs=30.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..+|||.|+|++|..+++.+.+.|+..+..+|.+
T Consensus        27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            5789999999999999999999999888888643

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=93.05  E-value=0.84  Score=45.69  Aligned_cols=93  Identities=15%  Similarity=0.093  Sum_probs=65.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +.|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++- +..+   .+.   +.+.+-..+|.++-+.
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~---~~~---L~~agi~~A~~vv~~~  472 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DATQ---LEL---LRAAGAEKAEAIVITC  472 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eCCC---HHH---HHhcCCccCCEEEEEe
Confidence            579999999999999999999998 7999999999999999988654322 2211   122   2223456799999999


Q ss_pred             CChHHHHH---HHHhhcCCceEEE
Q 017793          265 GFDKTMST---ALNATRPGGKVCL  285 (366)
Q Consensus       265 g~~~~~~~---~~~~l~~~G~~v~  285 (366)
                      +.++.-..   ..+.+.|.-+++.
T Consensus       473 ~d~~~n~~i~~~~r~~~p~~~Iia  496 (601)
T PRK03659        473 NEPEDTMKIVELCQQHFPHLHILA  496 (601)
T ss_pred             CCHHHHHHHHHHHHHHCCCCeEEE
Confidence            87643222   2344556666654

>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases

Probab=93.05  E-value=1.1  Score=38.27  Aligned_cols=104  Identities=14%  Similarity=0.250  Sum_probs=65.0

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ......++.+||-+|+|. |..+..+++..+. ..+++++.+++..+.+++...  +.+.....   +..+    .. ..
T Consensus        33 ~~~~~~~~~~vldiG~G~-G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~---d~~~----~~-~~  103 (223)
T TIGR01934        33 KLIGVFKGQKVLDVACGT-GDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQA---DAEA----LP-FE  103 (223)
T ss_pred             HHhccCCCCeEEEeCCCC-ChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhccCCCceEEec---chhc----CC-CC
Confidence            334455788999999876 7777788887653 379999999887777665332  11111111   1111    10 01


Q ss_pred             CCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEccc
Q 017793          254 GSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       254 ~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      ...+|+++.+.+     . ...+..+.+.|+++|+++.++..
T Consensus       104 ~~~~D~i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  145 (223)
T TIGR01934       104 DNSFDAVTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEFS  145 (223)
T ss_pred             CCcEEEEEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEec
Confidence            346898875432     1 24577788899999999987643

Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=93.05  E-value=1.6  Score=39.67  Aligned_cols=86  Identities=14%  Similarity=0.170  Sum_probs=57.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.+|.|+|-|.+|.+.++.++..|. .|++..+.....+.+++.|+.. .       +    +.++.    ...|+|+-
T Consensus        15 kgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~v-~-------s----l~Eaa----k~ADVV~l   77 (335)
T PRK13403         15 QGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFEV-M-------S----VSEAV----RTAQVVQM   77 (335)
T ss_pred             CcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCEE-C-------C----HHHHH----hcCCEEEE
Confidence            57899999999999999999999999 5555544445555666666531 1       1    22222    35899998


Q ss_pred             cCCChHH---H-HHHHHhhcCCceEEE
Q 017793          263 CVGFDKT---M-STALNATRPGGKVCL  285 (366)
Q Consensus       263 ~~g~~~~---~-~~~~~~l~~~G~~v~  285 (366)
                      +++.+..   + ...+..|+++..++.
T Consensus        78 lLPd~~t~~V~~~eil~~MK~GaiL~f  104 (335)
T PRK13403         78 LLPDEQQAHVYKAEVEENLREGQMLLF  104 (335)
T ss_pred             eCCChHHHHHHHHHHHhcCCCCCEEEE
Confidence            8876433   2 234566777765554

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=93.04  E-value=0.47  Score=36.51  Aligned_cols=90  Identities=18%  Similarity=0.211  Sum_probs=52.1

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHC-CCCeEEEEcCCh-hHHHHHHHcC----CceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          186 NVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDV-QRLSIARNLG----ADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~-g~~~vv~v~~~~-~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      +|.|+| +|.+|...++++... .++.+..+.++. ....+...++    ..... ...  .+    ...+     ..+|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~--~~----~~~~-----~~~D   68 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLS-VED--AD----PEEL-----SDVD   68 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEB-EEE--TS----GHHH-----TTES
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccccccccee-Eee--cc----hhHh-----hcCC
Confidence            689999 799999998888864 454444444444 2222222222    11111 111  01    1111     5799


Q ss_pred             EEEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          259 VSFDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       259 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +||.|.+.....+..-..+..+-+++..+
T Consensus        69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s   97 (121)
T PF01118_consen   69 VVFLALPHGASKELAPKLLKAGIKVIDLS   97 (121)
T ss_dssp             EEEE-SCHHHHHHHHHHHHHTTSEEEESS
T ss_pred             EEEecCchhHHHHHHHHHhhCCcEEEeCC
Confidence            99999997756556656667777787765

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.04  E-value=0.25  Score=38.41  Aligned_cols=80  Identities=18%  Similarity=0.181  Sum_probs=47.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc-CChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITD-VDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .-+|-|+|+|.+|......++..|. .|..+. ++.++.+.+.. ++...+.++       .+    +    -..+|++|
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~-------~~----~----~~~aDlv~   73 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDL-------EE----I----LRDADLVF   73 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----T-------TG----G----GCC-SEEE
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccc-------cc----c----cccCCEEE
Confidence            4578999999999999999999998 677764 44444444443 333222221       01    1    24689999


Q ss_pred             EcCCChHHHHHHHHhhcCC
Q 017793          262 DCVGFDKTMSTALNATRPG  280 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~  280 (366)
                      -++... .+...++.|...
T Consensus        74 iavpDd-aI~~va~~La~~   91 (127)
T PF10727_consen   74 IAVPDD-AIAEVAEQLAQY   91 (127)
T ss_dssp             E-S-CC-HHHHHHHHHHCC
T ss_pred             EEechH-HHHHHHHHHHHh
Confidence            999966 666666766544

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=93.03  E-value=1.2  Score=40.21  Aligned_cols=69  Identities=19%  Similarity=0.206  Sum_probs=47.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|.|+|.|.+|......+...|. .|++.++++++.+.+.+.|....       .+..    +..    ...|+||.|+.
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~----~~~----~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETAR----QVT----EQADVIFTMVP   64 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHH----HHH----hcCCEEEEecC
Confidence            47789999999877777777788 68888999988888777665321       1111    111    24788888877


Q ss_pred             ChHHH
Q 017793          266 FDKTM  270 (366)
Q Consensus       266 ~~~~~  270 (366)
                      .....
T Consensus        65 ~~~~~   69 (291)
T TIGR01505        65 DSPQV   69 (291)
T ss_pred             CHHHH
Confidence            65333

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.00  E-value=0.89  Score=39.35  Aligned_cols=81  Identities=21%  Similarity=0.323  Sum_probs=48.0

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.++||.| +|.+|...+..+...|+ .|+.+++++++.+.+ .+   .+... .+..+ ++..++.+.++++.. .-++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   84 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELGS   84 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence            57899998 68999998888778899 677787776654322 22   23221 11111 122233333333322 2357


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|.+|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            9999998864

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.97  E-value=1.8  Score=39.55  Aligned_cols=38  Identities=24%  Similarity=0.205  Sum_probs=31.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI  223 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~  223 (366)
                      .+|.|+|+|.+|.-.++.+...|. .|...+.+++..+.
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~   45 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA   45 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence            579999999999887777778899 78888888775543

>PRK08251 short chain dehydrogenase; Provisional

Probab=92.97  E-value=1.4  Score=38.39  Aligned_cols=79  Identities=20%  Similarity=0.260  Sum_probs=47.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L-----GADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l-----g~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +.++||.| +|++|...++.+...|. .|+.+++++++.+.+.+ +     +... .  .|+ ++..++...+.++... 
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDV-NDHDQVFEVFAEFRDE-   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCC-CCHHHHHHHHHHHHHH-
Confidence            46799998 69999887777777788 67777777766543321 1     1111 1  122 2223333444433322 


Q ss_pred             CCCCcEEEEcCC
Q 017793          254 GSGIDVSFDCVG  265 (366)
Q Consensus       254 ~~~~d~vld~~g  265 (366)
                      -+++|+++.+.|
T Consensus        79 ~~~id~vi~~ag   90 (248)
T PRK08251         79 LGGLDRVIVNAG   90 (248)
T ss_pred             cCCCCEEEECCC
Confidence            357999999886

>PRK12367 short chain dehydrogenase; Provisional

Probab=92.96  E-value=0.76  Score=40.25  Aligned_cols=74  Identities=23%  Similarity=0.200  Sum_probs=43.5

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      +.++||.| +|++|...++.+...|+ .|+.+++++ +..+... .+....+..  +-.+.. .+.+.    -+.+|+++
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~--D~~~~~-~~~~~----~~~iDilV   84 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKW--ECGKEE-SLDKQ----LASLDVLI   84 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEe--eCCCHH-HHHHh----cCCCCEEE
Confidence            57899998 68999998888888898 677776665 2222211 111112111  111221 22222    24699999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      ++.|.
T Consensus        85 nnAG~   89 (245)
T PRK12367         85 LNHGI   89 (245)
T ss_pred             ECCcc
Confidence            99875

>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)

Probab=92.96  E-value=1.2  Score=32.02  Aligned_cols=91  Identities=23%  Similarity=0.296  Sum_probs=54.7

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cC-CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN---LG-ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~---lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      ++-.|+|. |....++++ .....+++++.+++..+.+++   .. ......+.   .++.....    ....++|+++.
T Consensus         2 ildig~G~-G~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~d~i~~   72 (107)
T cd02440           2 VLDLGCGT-GALALALAS-GPGARVTGVDISPVALELARKAAAALLADNVEVLK---GDAEELPP----EADESFDVIIS   72 (107)
T ss_pred             eEEEcCCc-cHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHhcccccceEEEE---cChhhhcc----ccCCceEEEEE
Confidence            45567765 777777777 444589999999887777662   11 11111111   12222111    12467999987


Q ss_pred             cCCC-------hHHHHHHHHhhcCCceEEEE
Q 017793          263 CVGF-------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       263 ~~g~-------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....       ...+....+.++++|.++..
T Consensus        73 ~~~~~~~~~~~~~~l~~~~~~l~~~g~~~~~  103 (107)
T cd02440          73 DPPLHHLVEDLARFLEEARRLLKPGGVLVLT  103 (107)
T ss_pred             ccceeehhhHHHHHHHHHHHHcCCCCEEEEE
Confidence            6543       33556677888999988754

There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).

>TIGR02072 BioC biotin biosynthesis protein BioC

Probab=92.95  E-value=1.3  Score=38.17  Aligned_cols=96  Identities=19%  Similarity=0.323  Sum_probs=60.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.+||-+|+|. |.....+++......+++++.+++..+.+++...+.+.....   +..    ... .....+|+|+.
T Consensus        34 ~~~~vLDlG~G~-G~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~---d~~----~~~-~~~~~fD~vi~  104 (240)
T TIGR02072        34 IPASVLDIGCGT-GYLTRALLKRFPQAEFIALDISAGMLAQAKTKLSENVQFICG---DAE----KLP-LEDSSFDLIVS  104 (240)
T ss_pred             CCCeEEEECCCc-cHHHHHHHHhCCCCcEEEEeChHHHHHHHHHhcCCCCeEEec---chh----hCC-CCCCceeEEEE
Confidence            346788888766 667777777654446899999988877776643321111111   111    110 01356999987


Q ss_pred             cCC------ChHHHHHHHHhhcCCceEEEEc
Q 017793          263 CVG------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...      ....+..+.+.|+++|.++...
T Consensus       105 ~~~l~~~~~~~~~l~~~~~~L~~~G~l~~~~  135 (240)
T TIGR02072       105 NLALQWCDDLSQALSELARVLKPGGLLAFST  135 (240)
T ss_pred             hhhhhhccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            542      2346677888999999988764

This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology.

>PLN00203 glutamyl-tRNA reductase

Probab=92.94  E-value=0.7  Score=45.10  Aligned_cols=74  Identities=15%  Similarity=0.325  Sum_probs=50.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +.+|+|+|+|.+|.+++..+...|+..|+++.++.++.+.+ .+++...+. +    ..+. .+.+.    -..+|+||.
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~----~~~~-dl~~a----l~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-Y----KPLD-EMLAC----AAEADVVFT  335 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-e----ecHh-hHHHH----HhcCCEEEE
Confidence            67899999999999999999989987788888888876544 445421111 1    0111 11111    246899999


Q ss_pred             cCCCh
Q 017793          263 CVGFD  267 (366)
Q Consensus       263 ~~g~~  267 (366)
                      |.+.+
T Consensus       336 AT~s~  340 (519)
T PLN00203        336 STSSE  340 (519)
T ss_pred             ccCCC
Confidence            98764

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=92.94  E-value=0.33  Score=43.48  Aligned_cols=95  Identities=19%  Similarity=0.246  Sum_probs=59.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ..+.++||+|+|++|.+++..+...|+..|.++.++.++.+.+ ++++....+.+ .  .+.    .+    .-..+|+|
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~----~~----~~~~~Div  189 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LEL----QE----ELADFDLI  189 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccc----hh----ccccCCEE
Confidence            3567899999999999999999999966888888888876544 34432110111 0  000    01    12569999


Q ss_pred             EEcCCChHHH-----HHHHHhhcCCceEEEEc
Q 017793          261 FDCVGFDKTM-----STALNATRPGGKVCLIG  287 (366)
Q Consensus       261 ld~~g~~~~~-----~~~~~~l~~~G~~v~~g  287 (366)
                      ++|.+..-.-     ....+.+.++..++.+-
T Consensus       190 InaTp~g~~~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        190 INATSAGMSGELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             EECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            9998754110     11234566666666553

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=92.93  E-value=1.5  Score=39.54  Aligned_cols=94  Identities=17%  Similarity=0.146  Sum_probs=53.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+.+++.|...  . ................  ...+|++|-|+.
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~--~~~~d~vila~k   75 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAE--LGPQDLVILAVK   75 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhH--cCCCCEEEEecc
Confidence            58999999999887777777787 5777777777777776655421  0 0000000000000111  257999999987


Q ss_pred             ChHHHHHHHH----hhcCCceEEEE
Q 017793          266 FDKTMSTALN----ATRPGGKVCLI  286 (366)
Q Consensus       266 ~~~~~~~~~~----~l~~~G~~v~~  286 (366)
                      ... ....+.    .+.++..++.+
T Consensus        76 ~~~-~~~~~~~l~~~l~~~~~iv~~   99 (304)
T PRK06522         76 AYQ-LPAALPSLAPLLGPDTPVLFL   99 (304)
T ss_pred             ccc-HHHHHHHHhhhcCCCCEEEEe
Confidence            543 233333    34444556554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	366
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		3e-84
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		9e-83
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		4e-81
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		6e-81
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		3e-55
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		3e-43
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		3e-43
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		7e-43
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		2e-40
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		9e-36
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		3e-35
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		1e-31
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		5e-28
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		7e-28
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		7e-26
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		7e-25
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		3e-24
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		2e-23
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-23
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		8e-23
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		1e-22
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		1e-22
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		5e-22
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		8e-22
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		1e-21
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		3e-21
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		4e-21
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		5e-21
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-20
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		2e-20
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		2e-20
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		3e-20
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		3e-20
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		3e-20
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		7e-20
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-20
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-20
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		9e-20
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		1e-19
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		1e-19
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-19
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		1e-19
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		1e-19
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		2e-19
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-19
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		2e-19
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		2e-19
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		3e-19
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		4e-19
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		4e-19
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		5e-19
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		6e-19
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		7e-19
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-17
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		1e-17
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-17
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		4e-17
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		1e-16
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		2e-16
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		6e-16
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		7e-16
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		4e-15
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		4e-15
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		6e-15
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-14
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		2e-14
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		3e-14
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		3e-14
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		8e-14
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		9e-14
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		1e-13
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		3e-13
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-13
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		5e-13
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		6e-13
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		3e-12
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		2e-11
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		7e-11
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		1e-10
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		2e-09
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		7e-09
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-08
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		4e-08
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		5e-08
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		6e-08
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		7e-08
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		8e-08
2cf5_A	357	Crystal Structures Of The Arabidopsis Cinnamyl Alco		1e-07
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		4e-07
2cd9_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 - A		5e-06
2cdb_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 In		5e-06
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		5e-05
2b5v_A	357	Crystal Structure Of Glucose Dehydrogenase From Hal		3e-04
2b5w_A	357	Crystal Structure Of D38c Glucose Dehydrogenase Mut		4e-04

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score =  308 bits (789), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 159/354 (44%), Positives = 232/354 (65%), Gaps = 9/354 (2%)
Query: 13  NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI 72
           + N++A L     L+++   +P     +V +++  +GICGSDVH+++       R A+FI
Sbjct: 3   SDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYE-----HGRIADFI 57
Query: 73  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 132
           VK PMVIGHE +G + +VG  VK L+ GDRVA+EPG+ C  C  CK G YNLCP++ F  
Sbjct: 58  VKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCA 117
Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS 192
           +PP +G+LA   VH A  C+KLPDNVSLEEGA+ EPLSVGVHACRRA V   T V+++G+
Sbjct: 118 TPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGA 177
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           GPIGLV++LAA+A+GA  ++ T    +RL +A+N GAD T  V    E+  + + +I++A
Sbjct: 178 GPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSA 236
Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR 312
           +G   +V+ DC G +K ++  +N TR GG + L+G+    +TV L  A ARE+D+  +FR
Sbjct: 237 IGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFR 296
Query: 313 YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS-AQGGNAIKVMFN 365
           Y + +P+ +E + SG+ +VK L+TH F   Q    DAFE +  +  N IKVM +
Sbjct: 297 YCNDYPIALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score =  303 bits (776), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 158/353 (44%), Positives = 226/353 (64%), Gaps = 10/353 (2%)
Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++       R  NF
Sbjct: 5   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYG-----RIGNF 59
Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F 
Sbjct: 60  IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 119
Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIG+VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct: 180 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 237
Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            +G   +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+F
Sbjct: 238 QLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVF 297
Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
           RY +TWP+ I  L S  ++VKPL+THRF   +K +E AFE + + G  +K+M 
Sbjct: 298 RYCNTWPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIML 347

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score =  298 bits (763), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 154/351 (43%), Positives = 226/351 (64%), Gaps = 10/351 (2%)
Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIV 73
           +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++       R  +F+V
Sbjct: 6   ENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQ-----HGRIGDFVV 60
Query: 74  KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 133
           KKPMV+GHE +G + +VGS V+ L+ GDRVA++PG        CK G YNL P + F  +
Sbjct: 61  KKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCAT 120
Query: 134 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSG 193
           PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G+G
Sbjct: 121 PPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAG 180
Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
           PIGLV LLAA+A GA ++++TD+   RLS A+ +GAD   ++S   E  +    K++  +
Sbjct: 181 PIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISN--ESPEEIAKKVEGLL 238
Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 313
           GS  +V+ +C G + ++   + AT  GG + L+GL     +V L  AA REVD+ G+FRY
Sbjct: 239 GSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRY 298
Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
            +TWP+ I  L S  ++VKPL+THRF   +K +E AFE S + G  +KVM 
Sbjct: 299 CNTWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKK-GLGLKVMI 346

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score =  297 bits (761), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 155/345 (44%), Positives = 218/345 (63%), Gaps = 9/345 (2%)
Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K  N++  + G   L+++ Y +P  GP +V +R  ++GICGSDVH+++       R  NF
Sbjct: 5   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYG-----RIGNF 59
Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           IVKKP V+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F 
Sbjct: 60  IVKKPXVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFC 119
Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIG VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct: 180 AGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 237
Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            +G   +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+F
Sbjct: 238 QLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVF 297
Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
           RY +TWP+ I  L S  ++VKPL+THRF   +K +E AFE   +G
Sbjct: 298 RYCNTWPVAISXLASKSVNVKPLVTHRFPL-EKALE-AFETFKKG 340

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/329 (39%), Positives = 188/329 (57%), Gaps = 13/329 (3%)
Query: 40  DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 99
           +V V +++ GICGSDVH +K   +  M     IV+   V+GHE AG +  V   VKS++V
Sbjct: 42  EVTVAVRSTGICGSDVHFWKHGCIGPM-----IVECDHVLGHESAGEVIAVHPSVKSIKV 96
Query: 100 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS 159
           GDRVA+EP + C  C  C  G YN C  + F  +PP  G L   V HPA  C+K+  N+S
Sbjct: 97  GDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMS 155
Query: 160 LEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 219
            E GAM EPLSV +   +RA V     V+I G+GPIGL+T+L A+A GA  ++ITD+D  
Sbjct: 156 YENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEG 215
Query: 220 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID--VSFDCVGFDKTMSTALNAT 277
           RL  A+ +   E      +    +    KI  + G GI+  V+ +C G + +++ A+ A 
Sbjct: 216 RLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAV 273
Query: 278 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITH 337
           + GGKV +IG+ K E+ +    A+ REVD+   +RY +TWP  I  + +G +D+  L+TH
Sbjct: 274 KFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTH 333
Query: 338 RFGFTQKEIEDAFEISAQ-GGNAIKVMFN 365
           RF    ++   AFE ++     AIKV   
Sbjct: 334 RFPL--EDALKAFETASDPKTGAIKVQIQ 360

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score =  172 bits (436), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 185/340 (54%), Gaps = 22/340 (6%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P  GP +V +++ A  ICG+D+H ++  + +  R     +K P + GHE AG + E+G 
Sbjct: 23  VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSR-----IKPPQIXGHEVAGEVVEIGP 77
Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
            V+ +EVGD V++E  I CG C  C+ G Y++C   + FG   T+G  A   V PA+  +
Sbjct: 78  GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIW 136
Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPET--NVMIMGSGPIGLVTLLAARAFGAPR 210
           K P ++  E   + EPL    +A      GP +  +V+I G+GP+GL+ +  A+A GA  
Sbjct: 137 KNPKSIPPEYATLQEPLG---NAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYP 193
Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM 270
           +I+++    R  +A+ +GAD    ++   EDV  +V  I +  G+G+DV  +  G  K +
Sbjct: 194 VIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKAL 249
Query: 271 STALNATRPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSG 327
              L A  P G+V L+GL   ++T+        + + + GI       TW      L+SG
Sbjct: 250 EQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSG 309
Query: 328 KIDVKPLITHRF-GFTQKEIEDAFEISAQGGNAIKVMFNL 366
           K+++ P+ITH++ GF +   E+AFE+  + G   KV+F L
Sbjct: 310 KLNLDPIITHKYKGFDK--YEEAFELX-RAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score =  172 bits (436), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 185/340 (54%), Gaps = 22/340 (6%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P  GP +V +++ A  ICG+D+H ++  + +  R     +K P + GHE AG + E+G 
Sbjct: 24  VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSR-----IKPPQIXGHEVAGEVVEIGP 78
Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
            V+ +EVGD V++E  I CG C  C+ G Y++C   + FG   T+G  A   V PA+  +
Sbjct: 79  GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIW 137
Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPET--NVMIMGSGPIGLVTLLAARAFGAPR 210
           K P ++  E   + EPL    +A      GP +  +V+I G+GP+GL+ +  A+A GA  
Sbjct: 138 KNPKSIPPEYATLQEPLG---NAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYP 194
Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM 270
           +I+++    R  +A+ +GAD    ++   EDV  +V  I +  G+G+DV  +  G  K +
Sbjct: 195 VIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKAL 250
Query: 271 STALNATRPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSG 327
              L A  P G+V L+GL   ++T+        + + + GI       TW      L+SG
Sbjct: 251 EQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSG 310
Query: 328 KIDVKPLITHRF-GFTQKEIEDAFEISAQGGNAIKVMFNL 366
           K+++ P+ITH++ GF +   E+AFE+  + G   KV+F L
Sbjct: 311 KLNLDPIITHKYKGFDK--YEEAFELX-RAGKTGKVVFXL 347

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 177/336 (52%), Gaps = 17/336 (5%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P  GP +V +++ A  ICG+D+H ++  + +  R     +K P ++GHE AG + EVG 
Sbjct: 24  VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSR-----IKPPQIMGHEVAGEVVEVGP 78
Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
            V+ L+VGD +++E  I CG C  CK   Y++C   + FG    +G  AH  + PAK  +
Sbjct: 79  GVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAW 137
Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRII 212
           K P ++  E  A+ EPL   V       +   +  +I G+GP+GL+ +  A+A GA  +I
Sbjct: 138 KNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVI 196
Query: 213 ITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMST 272
           +++    R  +A+ +GAD    V+   ED    V  I +  G+G++V  +  G  K +  
Sbjct: 197 VSEPSEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPKALEQ 252
Query: 273 ALNATRPGGKVCLIGLAKTEMTV---ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI 329
            L A  PGG+V L+GL   E+T+    L    A EV  I       TW      ++SGK+
Sbjct: 253 GLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQSGKL 312
Query: 330 DVKPLITHRF-GFTQKEIEDAFEISAQGGNAIKVMF 364
           ++ P+ITH++ GF +   E+AFE+   G     V F
Sbjct: 313 NLDPIITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 171/336 (50%), Gaps = 18/336 (5%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P  GP ++ VR++A  ICG+D+H +K    +  R     ++ P+V GHE +G++E VG 
Sbjct: 20  VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGR-----IRPPLVTGHEFSGVVEAVGP 74
Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
            V+  +VGD V+LE  I C  C  C+ G+Y++C   +  G    +G  A  VV PA+  +
Sbjct: 75  GVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAW 133
Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRII 212
             P ++  E  A+ EP    VH     +     +V+I G+GPIGL+  +  RA GA  I+
Sbjct: 134 VNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPIL 193
Query: 213 ITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMST 272
           ++D +  RL+ AR         +  D+ +V      ++   GSG++V  +  G +  +  
Sbjct: 194 VSDPNPYRLAFARPYADRLVNPLEEDLLEV------VRRVTGSGVEVLLEFSGNEAAIHQ 247
Query: 273 ALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI 329
            L A  PGG+  ++G+    +   L      R +   GI   R   TW      + SG++
Sbjct: 248 GLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRV 307
Query: 330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
           D+ PL+THR   ++    +AF + A  G A+KV+ +
Sbjct: 308 DLSPLLTHRLPLSR--YREAFGLLAS-GQAVKVILD 340

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score =  147 bits (371), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 14/334 (4%)
Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           ++   A  L  +  + ++   +P  GP D+ V+++A GICG+D H              F
Sbjct: 21  QSXXKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH---------GEF 71
Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
               P+ +GHE  GI+ E GS V+ +  G R+  +P ISCG C  C+AG  NLC  +R  
Sbjct: 72  PSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAI 131
Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
           G    +G  A  V+ P K  +++P  +    GA CEPL+  +H    + +   + V I+G
Sbjct: 132 GI-HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILG 190
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
            G IGL+T+  AR  GA  +I++     +  +A  +GA  TA V     DV   +     
Sbjct: 191 GGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA--TATVDPSAGDVVEAIAGPVG 248
Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIG 309
            +  G+DV  +C G  +T+  +    + GG V ++G+      V + P     RE+ V+G
Sbjct: 249 LVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLG 308
Query: 310 IFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQ 343
            F          + + +G I++   I+ R    +
Sbjct: 309 SFINPFVHRRAADLVATGAIEIDRXISRRISLDE 342

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 152/328 (46%), Gaps = 18/328 (5%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
           L I    +PT    +V+V++K  GICGSD H +        R  N   K P VIGHE  G
Sbjct: 32  LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIY--------RGHNPFAKYPRVIGHEFFG 83
Query: 86  IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVV 145
           +I+ VG  V+S  VG+RVA++P +SCGHC  C  G  N+C  +   G    +G  +   V
Sbjct: 84  VIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGV-HADGGFSEYAV 142
Query: 146 HPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 205
            PAK  +K+P+ V+ +   M EP ++  +            V++ G+GPIGL  +   + 
Sbjct: 143 VPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKG 202
Query: 206 -FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 264
            +    +I+ D   +RL  A+  GAD        I +  T +G+     G    +  D  
Sbjct: 203 VYNVKNVIVADRIDERLEKAKESGADWA------INNSQTPLGESFAEKGIKPTLIIDAA 256
Query: 265 GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFL 324
                +  A+    P  ++ L+G +     V       +E+ +       + +P+ I++L
Sbjct: 257 CHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDWL 316
Query: 325 RSGKIDVKPLITHRFGFTQKEIEDAFEI 352
             G I  + LITH F F  + + DA  +
Sbjct: 317 SKGLIKPEKLITHTFDF--QHVADAISL 342

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 157/322 (48%), Gaps = 30/322 (9%)
Query: 33  LPTLGPQD-VKVRIKALGICGSDVHH-FKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90
           +P +  QD V+V+I + G+CGSD+   FK          N     P+ +GHE +G I+ V
Sbjct: 19  IPEIKHQDEVRVKIASSGLCGSDLPRIFK----------NGAHYYPITLGHEFSGYIDAV 68
Query: 91  GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
           GS V  L  GD VA  P + C  C  C  G Y+ C +  F GS   +G  A  +V   K 
Sbjct: 69  GSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR-RDGGFAEYIVVKRKN 127
Query: 151 CYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPR 210
            + LP ++ +E+GA  EP++VG+HA   A      NV+I+G+G IGL+ +  A A GA  
Sbjct: 128 VFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKS 187
Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS--GIDVSFDCVGFDK 268
           +   D+  ++L++A++ GA +T   S      +    ++Q+ +       +  +  G  +
Sbjct: 188 VTAIDISSEKLALAKSFGAMQTFNSS------EMSAPQMQSVLRELRFNQLILETAGVPQ 241
Query: 269 TMSTALNATRPGGKVCLIGLAKTEM---TVALTPAAAREVDVIGIF-RYRSTWP-----L 319
           T+  A+    P  ++ L+G    ++   +        +E+ VIG +  Y S WP      
Sbjct: 242 TVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWET 301
Query: 320 CIEFLRSGKIDVKPLITHRFGF 341
               L   K+ ++PLI HR  F
Sbjct: 302 ASRLLTERKLSLEPLIAHRGSF 323

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 146/322 (45%), Gaps = 34/322 (10%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVIGH 81
           LKI+    PT+   +V VRIKA G+C +D+H     + VK            K P++ GH
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKP-----------KLPLIPGH 61
Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
           E  GI+EEVG  V  L+VGDRV + P +  +CGHC  C +G   LC   +  G    +G 
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGG 119
Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
            A      A    K+PDN+S EE A   C  ++    A +     P   V I G G +G 
Sbjct: 120 YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGH 178
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
           V +  A+A G   ++  D+  ++L +A+ LGAD        +  +  D  K       G+
Sbjct: 179 VAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKFMKEKVGGV 231
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRST 316
             +           +A N+ R GG   L+GL   EM + +       + +IG I   R  
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKD 291
Query: 317 WPLCIEFLRSGK----IDVKPL 334
               ++F   GK    I+V+PL
Sbjct: 292 LQEALQFAAEGKVKTIIEVQPL 313

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVIGH 81
           LKI+    PT+   +V VRIKA G+C +D+H     + VK            K P++ GH
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKP-----------KLPLIPGH 61
Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
           E  GI+EEVG  V  L+VGDRV + P +  +CGHC  C +G   LC   +  G    +G 
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGG 119
Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
            A      A    K+PDN+S EE A   C  ++    A +     P   V I G G  G 
Sbjct: 120 YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFGH 178
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
           V +  A+A G   ++  D+  ++L +A+ LGAD        +  +  D  K       G+
Sbjct: 179 VAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKFMKEKVGGV 231
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRST 316
             +           +A N+ R GG   L+GL   EM + +       + +IG I   R  
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKD 291
Query: 317 WPLCIEFLRSGK----IDVKPL 334
               ++F   GK    I+V+PL
Sbjct: 292 LQEALQFAAEGKVKTIIEVQPL 313

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score =  114 bits (286), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 12/317 (3%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHE 82
           K LK++   +P      V ++I+A G+C SDVH  +  +   +R    + VK P+ +GHE
Sbjct: 11  KPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 83  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
            AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A 
Sbjct: 70  IAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAE 128
Query: 143 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS-GPIGLVTL 200
            V+ P  K  YKL    ++E   +         A R+A++ P   ++++G+ G +G + +
Sbjct: 129 YVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAI 188
Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
             A+A     II  DV  + L  A+  GAD     S+  +D  +++ +I    G G D  
Sbjct: 189 QIAKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GKGADAV 244
Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPL 319
            D    +KT+S         GK  ++GL   ++          EV  IG +   +S +  
Sbjct: 245 IDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLG 304
Query: 320 CIEFLRSGKIDVKPLIT 336
            +    +GK  VKP++T
Sbjct: 305 IMSLAEAGK--VKPMVT 319

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  111 bits (277), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 19/310 (6%)
Query: 32  HLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91
            L  + P +  + ++  G+C +D+H         +   +F  K   V+GHE  GI++E+G
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH---------VAAGDFGNKAGTVLGHEGIGIVKEIG 70
Query: 92  SEVKSLEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
           ++V SL+VGDRV++      CGHC  C +G+   C E++  G    +G +A + +  A  
Sbjct: 71  ADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADY 129
Query: 151 CYKLPDNVSLEEGAMCEPLSVGVH-ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 209
             K+PD +   E +      V  + A + + V P    +I G+G +G + +  A+     
Sbjct: 130 AVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 210 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269
           ++I  D++  +L++A+ +GAD T   S D+  VD ++ KI    G G+  +  C      
Sbjct: 190 KVIAVDINQDKLNLAKKIGADVTIN-SGDVNPVD-EIKKITG--GLGVQSAIVCAVARIA 245
Query: 270 MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEFLRSGK 328
              A+ + +P GK+  + +  TEMT+++       V+V G +   R       +F   GK
Sbjct: 246 FEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK 305
Query: 329 IDVKPLITHR 338
             VKP++  R
Sbjct: 306 --VKPIVATR 313

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 19/310 (6%)
Query: 32  HLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91
            L  + P +  + ++  G+C +D+H         +   ++  K   V+GHE  GI++E+G
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH---------VAAGDYGNKAGTVLGHEGIGIVKEIG 70
Query: 92  SEVKSLEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
           ++V SL+VGDRV++      CGHC  C +G+   C E++  G    +G +A + +  A  
Sbjct: 71  ADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADY 129
Query: 151 CYKLPDNVSLEEGAMCEPLSVGVH-ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 209
             K+PD +   E +      V  + A + + V P    +I G+G +G + +  A+     
Sbjct: 130 AVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 210 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269
           ++I  D++  +L++A+ +GAD     S D+  VD ++ KI    G G+  +  C      
Sbjct: 190 KVIAVDINQDKLNLAKKIGADVIIN-SGDVNPVD-EIKKITG--GLGVQSAIVCAVARIA 245
Query: 270 MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEFLRSGK 328
              A+ + +P GK+  + L  TEMT+++       V+V G +   R       +F   GK
Sbjct: 246 FEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK 305
Query: 329 IDVKPLITHR 338
             VKP++  R
Sbjct: 306 --VKPIVATR 313

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 143/328 (43%), Gaps = 28/328 (8%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           PT GP ++ +++ A G+C SD+       +  M  A +    P+ +GHE  G + E+G  
Sbjct: 21  PTPGPGEILLKVTAAGLCHSDIF------VMDMPAAQYAYGLPLTLGHEGVGTVAELGEG 74
Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG-SPP---TNGSLA-HKVVHPA 148
           V    VGD VA+     CG C  C  G  N C      G +PP   + GS+A + +V  A
Sbjct: 75  VTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSA 134
Query: 149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAF 206
           +    + D   +    + +      HA  R    +GP +  +++G G +G V +   RA 
Sbjct: 135 RHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAV 194
Query: 207 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 266
            A R+I  D+D  RL++AR +GAD   K      D   ++       G G    FD VG 
Sbjct: 195 SAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIREL-----TGGQGATAVFDFVGA 249
Query: 267 DKTMSTALNATRPGGKVCLIGL---AKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEF 323
             T+ TA       G + ++G+   A  ++   + P  A  V     +  RS     +  
Sbjct: 250 QSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTP--YWGTRSELMEVVAL 307
Query: 324 LRSGKIDVKPLITHRFGFTQKEIEDAFE 351
            R+G++D+     H   FT  E   A+ 
Sbjct: 308 ARAGRLDI-----HTETFTLDEGPAAYR 330

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 152/319 (47%), Gaps = 21/319 (6%)
Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
           G + L++    +P  GP++V+VR+KA  +   DV    V+K      A+  +  P V+G 
Sbjct: 11  GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVW---VRK----GVASPKLPLPHVLGA 63
Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           + +G+++ VG  V+    GD V + PG+SCG C  C AG  NLCP  +  G    +G+ A
Sbjct: 64  DGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYA 122
Query: 142 HKVVHPAKLCYKLPDNVSLEEGAMCEP--LSVGVHACRRANVGPETNVMIMGSGP-IGLV 198
             VV P       P N+S EE A      L+       +  V P  +V++M +G  + + 
Sbjct: 123 EYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVA 182
Query: 199 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258
            +  A+ FGA R+I T     +L  A+ LGADET  V+    D   +V ++    G G D
Sbjct: 183 AIQIAKLFGA-RVIATAGSEDKLRRAKALGADET--VNYTHPDWPKEVRRLTG--GKGAD 237
Query: 259 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIG-IFRYRST 316
              D  G        + AT  GG++ + G +   E T+       R++ ++G     +S 
Sbjct: 238 KVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSR 296
Query: 317 WPLCIEFLRSGKIDVKPLI 335
               + F+  GK+  KP++
Sbjct: 297 LFPILRFVEEGKL--KPVV 313

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  104 bits (259), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 166/383 (43%), Gaps = 61/383 (15%)
Query: 12  KNQNMAAWLLG----IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
           K +   AW  G    I+ +++ P       P+  +VRI+ +  C   V H  +      +
Sbjct: 8   KCKAAIAWKTGSPLCIEEIEVSP-------PKACEVRIQVIATC---VCHTDINATDPKK 57
Query: 68  CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
            A F    P+V+GHECAGI+E VG  V + + GD+V       C  C LC +   NLC +
Sbjct: 58  KALF----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGK 113
Query: 128 MRFFGSPPTNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEE 162
           +R F  P  +  L                          + VV  A L  ++ D  +LE 
Sbjct: 114 LRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANLER 172
Query: 163 GAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 220
             +  C   S    A   A V P +   + G G +GL  ++  +  GA RII  D++ ++
Sbjct: 173 VCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEK 232
Query: 221 LSIARNLGADETA---KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 277
              A+ LGA +     ++   ++DV T++         G+D S DC G  +T+  A++ T
Sbjct: 233 FPKAKALGATDCLNPRELDKPVQDVITEL------TAGGVDYSLDCAGTAQTLKAAVDCT 286
Query: 278 RPGGKVC-LIGLAKTEMTVALTPA-AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKP 333
             G   C ++G    EMT+        R ++    G ++   + P  +   ++ K D+  
Sbjct: 287 VLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDL 346
Query: 334 LITHRFGFTQKEIEDAFEISAQG 356
           L+TH   F  + I DA ++  +G
Sbjct: 347 LVTHALPF--ESINDAIDLMKEG 367

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 149/354 (42%), Gaps = 52/354 (14%)
Query: 38  PQDVKVRIKAL--GICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           PQ  +VRIK L   +C +D + +  K    +         P ++GHE AGI+E VG  V 
Sbjct: 31  PQAGEVRIKILYTALCHTDAYTWSGKDPEGLF--------PCILGHEAAGIVESVGEGVT 82
Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR-----------------FFGSP---- 134
            ++ GD V       C  C  CK+G  NLC ++R                   G P    
Sbjct: 83  EVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHF 142
Query: 135 -PTNGSLAHKVVHPAKLCYKLP----DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMI 189
             T+    + VVH   +    P    D V L    +  P  +G      A V P +NV I
Sbjct: 143 MGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGV--PTGLGA-VWNTAKVEPGSNVAI 199
Query: 190 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK- 248
            G G +GL     A+  GA RII  D+D ++   A+  G +E      + +D D  + + 
Sbjct: 200 FGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF----VNPKDHDKPIQEV 255
Query: 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAA 302
           I +    G+D SF+C+G    M  AL     G G   ++G+A +   ++  P        
Sbjct: 256 IVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV 315
Query: 303 REVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
            +    G F+ R+  P  +E   + +I V   ITH    T  EI  AF++  +G
Sbjct: 316 WKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHN--LTLGEINKAFDLLHEG 367

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 168/385 (43%), Gaps = 65/385 (16%)
Query: 12  KNQNMAAWLLG----IKTLKIQPYHLPTLGPQDVKVRIKALG--ICGSDVHHFKVKKLST 65
           K +   AW  G    I+ +++ P       P+  +VRI+ +   +C +D++    KK + 
Sbjct: 8   KCKAAIAWKTGSPLCIEEIEVSP-------PKACEVRIQVIATCVCPTDINATDPKKKAL 60
Query: 66  MRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 125
                     P+V+GHECAGI+E VG  V + + GD+V       C  C LC +   NLC
Sbjct: 61  F---------PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLC 111
Query: 126 PEMRFFGSPPTNGSL-------------------------AHKVVHPAKLCYKLPDNVSL 160
            ++R F  P  +  L                          + VV  A L  ++ D  +L
Sbjct: 112 GKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANL 170
Query: 161 EEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 218
           E   +  C   S    A   A V P +   + G G +GL  ++  +  GA RII  D++ 
Sbjct: 171 ERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDING 230
Query: 219 QRLSIARNLGADETA---KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 275
           ++   A+ LGA +     ++   ++DV T++         G+D S DC G  +T+  A++
Sbjct: 231 EKFPKAKALGATDCLNPRELDKPVQDVITEL------TAGGVDYSLDCAGTAQTLKAAVD 284
Query: 276 ATRPGGKVC-LIGLAKTEMTVALTPA-AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDV 331
            T  G   C ++G    EMT+        R ++    G ++   + P  +   ++ K D+
Sbjct: 285 CTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDL 344
Query: 332 KPLITHRFGFTQKEIEDAFEISAQG 356
             L+TH   F  + I DA ++  +G
Sbjct: 345 DLLVTHALPF--ESINDAIDLMKEG 367

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 38  PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV--- 94
           P ++ +++KA GICGSDVH  +  +   +     +   P+ +GHE +G++ E G E    
Sbjct: 55  PTEIIIKVKACGICGSDVHXAQTDEEGYILYPG-LTGFPVTLGHEFSGVVVEAGPEAINR 113
Query: 95  ---KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 151
              K  E+G+ V  E  + CGHC  C  G  N C  +   G    +G+ A  V   AK  
Sbjct: 114 RTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYA 172
Query: 152 YKLPDNVSLEEG-------AMCEPLSVGVHAC--RRANVGPETNVMIMGSGPIGLVTLLA 202
           + L +   + EG       ++ EP SV  +A   R   + P  NV+I+G GPIGL  +  
Sbjct: 173 WSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAI 232
Query: 203 ARAFGAPRIIITDVDVQRLSIARNLGAD 230
            +  GA ++I+++    R ++A+ LGAD
Sbjct: 233 LKHAGASKVILSEPSEVRRNLAKELGAD 260

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 24  KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGH 81
           K L +Q   +P   GPQ V ++++A G+C SDVH  +  +   +R    + VK P+ +GH
Sbjct: 11  KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGH 68
Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A
Sbjct: 69  EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYA 127
Query: 142 HKVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVT 199
             V+ P  K  YKL    ++E   +         A R+A++ P +T +++   G +G + 
Sbjct: 128 EYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMA 187
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
           +  A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I  +   G+D 
Sbjct: 188 VQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDA 243
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 318
             D    +KT+S    A    GK  ++GL   ++          E+  +G +   +S + 
Sbjct: 244 VIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL 303
Query: 319 LCIEFLRSGKIDVKPLIT 336
             +    +GK  VKP+IT
Sbjct: 304 GIMRLAEAGK--VKPMIT 319

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 24  KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGH 81
           K L +Q   +P   GPQ V ++++A G+C SDVH  +  +   +R    + VK P+ +GH
Sbjct: 11  KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGH 68
Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A
Sbjct: 69  EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYA 127
Query: 142 HKVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVT 199
             V+ P  K  YKL    ++E   +         A R+A++ P +T +++   G +G + 
Sbjct: 128 EYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMA 187
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
           +  A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I  +   G+D 
Sbjct: 188 VQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDA 243
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 318
             D    +KT+S    A    GK  ++GL   ++          E+  +G +   +S + 
Sbjct: 244 VIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL 303
Query: 319 LCIEFLRSGKIDVKPLIT 336
             +    +GK  VKP+IT
Sbjct: 304 GIMRLAEAGK--VKPMIT 319

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 24  KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGH 81
           K L +Q   +P   GPQ V ++++A G+C SDVH  +  +   +R    + VK P+ +GH
Sbjct: 11  KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGH 68
Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A
Sbjct: 69  EIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYA 127
Query: 142 HKVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVT 199
             V+ P  K  YKL    ++E   +         A R+A++ P +T +++   G +G + 
Sbjct: 128 EYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMA 187
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
           +  A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I  +   G+D 
Sbjct: 188 VQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDA 243
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 318
             D    +KT+S    A    GK  ++GL   ++          E+  +G +   +S + 
Sbjct: 244 VIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL 303
Query: 319 LCIEFLRSGKIDVKPLIT 336
             +    +GK  VKP+IT
Sbjct: 304 GIMRLAEAGK--VKPMIT 319

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 153/362 (42%), Gaps = 49/362 (13%)
Query: 38  PQDVKVRIKAL--GICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           PQ  +VR+K L   +C +D + +  K    +         P V+GHE AGI+E VG  V 
Sbjct: 49  PQAGEVRVKVLYTALCHTDAYTWSGKDPEGLF--------PCVLGHEAAGIVESVGEGVT 100
Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR-----------------FFGSP---- 134
            ++ GD V       C  C  CK+G  NLC ++R                   G P    
Sbjct: 101 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHF 160
Query: 135 -PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE---PLSVGVHACRRANVGPETNVMIM 190
             T+    + VVH   +  K+     LE+  +     P  +G      A V P + V + 
Sbjct: 161 MGTSTFSQYTVVHDVSVA-KIDPVAPLEKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVF 218
Query: 191 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250
           G G +GL     A+A GA RII  D+D ++   A+N G  E        + +   +  + 
Sbjct: 219 GLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLT 278
Query: 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAARE 304
           +    G+D SF+C+G    M +AL     G G   ++G+A +   ++  P         +
Sbjct: 279 DG---GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWK 335
Query: 305 VDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
               G F+ RS  P  ++     +I V   ITH    T  +I  AF++    G+ ++V+ 
Sbjct: 336 GTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHN--MTLADINKAFDL-MHDGDCLRVVL 392
Query: 365 NL 366
           ++
Sbjct: 393 DM 394

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 137/313 (43%), Gaps = 24/313 (7%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGH 81
           K L I    +P  GP  ++V I+A G+C +D+H  +          ++ VK   P + GH
Sbjct: 36  KPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE---------GDWPVKPNPPFIPGH 86
Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
           E  G +  VGS VK ++ GDRV + P +  +CGHC  C  G   LC E    G    NG 
Sbjct: 87  EGVGFVSAVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEEQLNTGY-SVNGG 144
Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
            A  VV        LP N+   E A  +C  ++V     +  +  P   V+I G G +G 
Sbjct: 145 FAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGH 203
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
           + +  ARA G   +   D+D ++L +AR LGA  T    T + D    + K  +    G+
Sbjct: 204 MAVQYARAMGL-NVAAVDIDDRKLDLARRLGATVTVNAKT-VADPAAYIRKETDGGAQGV 261
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRST 316
            V+       K    AL     GG V L GL   +  +++       V V G I   R  
Sbjct: 262 LVTAVS---PKAFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLD 318
Query: 317 WPLCIEFLRSGKI 329
               ++F   GK+
Sbjct: 319 LQESLDFAADGKV 331

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 155/361 (42%), Gaps = 49/361 (13%)
Query: 38  PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           P+  +VRIK  A+GICG+D H         +   N +   P+++GHE AGI+E VG  V 
Sbjct: 31  PKAYEVRIKMVAVGICGTDDH---------VVSGNLVTPLPVILGHEAAGIVESVGEGVT 81
Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKV 144
           +++ GD+V       CG C +CK    N C +    G+P              G   H  
Sbjct: 82  TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHF 140
Query: 145 VHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGS 192
           +  +    Y + D  ++ +     PL          S G   A   A V P +   + G 
Sbjct: 141 LGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGL 200
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           G +GL  ++  +A GA RII  D++  + + A+ LGA E      + +D    + ++   
Sbjct: 201 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKE 256
Query: 253 M-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREV 305
           M   G+D SF+ +G  D  M++ L      G   ++G+      +++ P         + 
Sbjct: 257 MTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKG 316
Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
            V G F+ +   P  +    + K  +  LITH   F  ++I + F++    G +I+ +  
Sbjct: 317 AVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLT 373
Query: 366 L 366
Sbjct: 374 F 374

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 142/318 (44%), Gaps = 28/318 (8%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGHEC 83
           L I    +P  GP  V+V+I+A G+C +D+H             ++ VK   P + GHE 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD---------GDWPVKPTLPFIPGHEG 65
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
            G +  VGS V  ++ GDRV + P +  +CG+C  C  G   LC + +  G    NG   
Sbjct: 66  VGYVSAVGSGVSRVKEGDRVGV-PWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYG 123
Query: 142 HKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 199
             VV        LPD V   E A  +C  ++V     +  +  P   V+I G G +G V 
Sbjct: 124 EYVVADPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHVA 182
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
           +  ARA G  R+   D+D  +L++AR LGA+    V+ +  D D     +Q  +G    V
Sbjct: 183 VQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARDTDP-AAWLQKEIGGAHGV 236
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 318
               V   K  S A+   R GG + L GL   +    +     + + + G I   RS   
Sbjct: 237 LVTAVS-PKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQ 295
Query: 319 LCIEFLRSGKIDVKPLIT 336
             ++F   G  DVK  ++
Sbjct: 296 ESLDFAAHG--DVKATVS 311

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 152/350 (43%), Gaps = 44/350 (12%)
Query: 41  VKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL--- 97
           + V I + G+CGSDVH F        R  +  V  P+++GHE AG + EV  E + L   
Sbjct: 45  ILVEILSAGVCGSDVHMF--------RGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGE 96
Query: 98  --EVGDRVALEPGISCGHCSLCKAGSY-NLCPEMRFFG-------SPPTNGSLA-HKVVH 146
             + GD +    GI+CG C  CK      LCP  + +G        P   G  + H V+ 
Sbjct: 97  LLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLD 156
Query: 147 PAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPET----NVMIMGSGPIGLVTLLA 202
           P     K+ +   L+  AM   +  G  A    +  PE+     V+I G+GP+GL  ++ 
Sbjct: 157 PETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVI 214
Query: 203 ARAFGAPRIIITDVDVQRLSIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDVSF 261
           AR+ GA  +I+      RL +A  +GAD T  +  T +E+    +  I +  G G D   
Sbjct: 215 ARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITH--GRGADFIL 272
Query: 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW-PLC 320
           +  G  + +       R GG   + G+A  +  V   P    E  V+    ++  W    
Sbjct: 273 EATGDSRALLEGSELLRRGGFYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDT 329
Query: 321 IEFLRSGKID------VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
             F+++  I       +  LITHR     KE   A E+  +   A+KV+ 
Sbjct: 330 SHFVKTVSITSRNYQLLSKLITHRLPL--KEANKALEL-MESREALKVIL 376

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 29/271 (10%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM--VIGHEC 83
           L+I+   +P  GP  V V+I+A G+C +D+H  +          ++ VK P+  + GHE 
Sbjct: 19  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE---------GDWPVKPPLPFIPGHEG 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
            G +  VGS V  ++ GDRV + P +  +CG C  C  G   LC   +  G    NG  A
Sbjct: 70  VGYVAAVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYA 127
Query: 142 HKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 199
             V+        LP NV   E A  +C  ++V     ++ N  P   V I G G +G V 
Sbjct: 128 EYVLADPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVA 186
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGI 257
           +  ARA G   +   D+D  +L +AR LGA  T  A+    +E +  D+G     + + +
Sbjct: 187 VQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAV 245
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
                    +     A+   R GG + L+GL
Sbjct: 246 S--------NSAFGQAIGMARRGGTIALVGL 268

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 20/272 (7%)
Query: 24  KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHE 82
           K L+I+    P L G  DV VRI   G+C +D+H      +  M       K P  +GHE
Sbjct: 26  KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLH-----LVQGMWHELLQPKLPYTLGHE 80
Query: 83  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
             G IEEV   V+ LE GD V L P ++ G C  C+AG    C  + F G    +G  A 
Sbjct: 81  NVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAE 139
Query: 143 KVVHPAKLCYKLPDNVSLEEGAMCEPLS-VGVHACRRA-----NVGPETNVMIMGSGPIG 196
            +    +   KLP ++S E+     PL+  G+ A R        + P   V I+G G +G
Sbjct: 140 FMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLG 199
Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IEDVDTDVGKIQNAMGS 255
            + +   +      +I  DV  ++L +A  LGAD       D ++ V      ++   G 
Sbjct: 200 HIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQV------MELTRGR 253
Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
           G++V+ D VG   T+          G++ ++G
Sbjct: 254 GVNVAMDFVGSQATVDYTPYLLGRMGRLIIVG 285

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 149/317 (47%), Gaps = 12/317 (3%)
Query: 24  KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHE 82
           K L +Q   +P   GPQ V ++++A G+C SDVH  + +  +     +  VK P+ +GHE
Sbjct: 11  KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 83  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
            AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A 
Sbjct: 70  IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 143 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 200
            V+ P  K  YKL    ++E   +         A R+A++ P +T +++   G +G   +
Sbjct: 129 YVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAV 188
Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
             A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I  +   G+D  
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDAV 244
Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLC 320
            D    +KT+S    A    GK   +GL   ++          E+  +G      +  L 
Sbjct: 245 IDLNNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLG 304
Query: 321 IEFL-RSGKIDVKPLIT 336
           I  L  +GK  VKP IT
Sbjct: 305 IXRLAEAGK--VKPXIT 319

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 162/378 (42%), Gaps = 48/378 (12%)
Query: 19  WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMV 78
           W L  K   I+   +      +V++++ A GIC SD H         +   N +   P++
Sbjct: 15  WELK-KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEH---------VVSGNLVTPLPVI 64
Query: 79  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---- 134
           +GHE AGI+E VG  V +++ GD+V       CG C +CK    N C +    G+P    
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKND-LGNPRGTL 123
Query: 135 -------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HA 175
                    +G   H  V  +    Y + D  ++ +     PL          S G   A
Sbjct: 124 QDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 235
            + A V P +   + G G +GL  ++  +A GA RII  D++  + + A+ LGA E    
Sbjct: 184 VKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE---- 239
Query: 236 STDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEM 293
             + +D    + ++   M   G+D SF+ +G  D  M++ L      G   ++G+     
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQ 299
Query: 294 TVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 348
            +++ P         +  + G F+ + + P  +    + K  +  LIT+   F  ++I +
Sbjct: 300 NLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKINE 357
Query: 349 AFEISAQGGNAIKVMFNL 366
            F++  + G +I+ +   
Sbjct: 358 GFDL-LRSGKSIRTVLTF 374

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 160/373 (42%), Gaps = 48/373 (12%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDH---------VVSGTLVAPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------- 134
           AGI+E +G  V ++  GD+V       CG CS+CK    NLC  ++    P         
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTS 127
Query: 135 --PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRAN 180
                G   H  +  +    Y + D +S+ +     PL          S G   A + A 
Sbjct: 128 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAK 187
Query: 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 240
           V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +
Sbjct: 188 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC----VNPQ 243
Query: 241 DVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALT 298
           D    + ++   M + G+D SF+ +G   TM  AL+  +   G   ++G+      +++ 
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMN 303
Query: 299 P-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 353
           P         +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++ 
Sbjct: 304 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL- 360
Query: 354 AQGGNAIKVMFNL 366
            + G +I+ +   
Sbjct: 361 LRSGKSIRTILTF 373

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 160/373 (42%), Gaps = 48/373 (12%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDH---------VVSGTLVAPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------- 134
           AGI+E +G  V ++  GD+V       CG CS+CK    NLC  ++    P         
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTS 127
Query: 135 --PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRAN 180
                G   H  +  +    Y + D +S+ +     PL          S G   A + A 
Sbjct: 128 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAK 187
Query: 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 240
           V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +
Sbjct: 188 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC----VNPQ 243
Query: 241 DVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALT 298
           D    + ++   M + G+D SF+ +G   TM  AL+  +   G   ++G+      +++ 
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMN 303
Query: 299 P-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 353
           P         +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++ 
Sbjct: 304 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL- 360
Query: 354 AQGGNAIKVMFNL 366
            + G +I+ +   
Sbjct: 361 LRSGKSIRTILTF 373

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 154/361 (42%), Gaps = 49/361 (13%)
Query: 38  PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           P+  +VRIK  A+GIC +D H         +   N +   P+++GHE AGI+E VG  V 
Sbjct: 31  PKAYEVRIKMVAVGICHTDDH---------VVSGNLVTPLPVILGHEAAGIVESVGEGVT 81
Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKV 144
           +++ GD+V       CG C +CK    N C +    G+P              G   H  
Sbjct: 82  TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHF 140
Query: 145 VHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGS 192
           +  +    Y + D  ++ +     PL          S G   A   A V P +   + G 
Sbjct: 141 LGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGL 200
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           G +GL  ++  +A GA RII  D++  + + A+ LGA E      + +D    + ++   
Sbjct: 201 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKE 256
Query: 253 M-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREV 305
           M   G+D SF+ +G  D  M++ L      G   ++G+      +++ P         + 
Sbjct: 257 MTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKG 316
Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
            V G F+ +   P  +    + K  +  LITH   F  ++I + F++    G +I+ +  
Sbjct: 317 AVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLT 373
Query: 366 L 366
Sbjct: 374 F 374

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
           AGI+E +G  V ++  GD+V       CG C +CK    N C +        T       
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 137 ---NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANV 181
               G   H  +  +    Y + D +S+ +     PL          S G   A + A V
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV 189
Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
              +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D
Sbjct: 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQD 245
Query: 242 VDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP 299
               + ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 300 -----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
                    +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 355 QGGNAIKVMFNL 366
           + G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 153/358 (42%), Gaps = 48/358 (13%)
Query: 38  PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           P+  +VRIK  A+GIC +D H         +   N +   P+++GHE AGI+E VG  V 
Sbjct: 31  PKAYEVRIKMVAVGICRTDDH---------VVSGNLVTPLPVILGHEAAGIVESVGEGVT 81
Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKV 144
           +++ GD+V       CG C +CK    N C +    G+P              G   H  
Sbjct: 82  TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHF 140
Query: 145 VHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGS 192
           +  +    Y + D  ++ +     PL          S G   A   A V P +   + G 
Sbjct: 141 LGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGL 200
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           G +GL  ++  +A GA RII  D++  + + A+ LGA E      + +D    + ++   
Sbjct: 201 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKE 256
Query: 253 M-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREV 305
           M   G+D SF+ +G  D  M++ L      G   ++G+      +++ P         + 
Sbjct: 257 MTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKG 316
Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
            V G F+ +   P  +    + K  +  LITH   F  ++I + F++   G +   V+
Sbjct: 317 AVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDLLHSGKSICTVL 372

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 154/361 (42%), Gaps = 49/361 (13%)
Query: 38  PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           P+  +VRIK  A+GIC +D H         +   N +   P+++GHE AGI+E VG  V 
Sbjct: 31  PKAYEVRIKMVAVGICRTDDH---------VVSGNLVTPLPVILGHEAAGIVESVGEGVT 81
Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKV 144
           +++ GD+V       CG C +CK    N C +    G+P              G   H  
Sbjct: 82  TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHF 140
Query: 145 VHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGS 192
           +  +    Y + D  ++ +     PL          S G   A   A V P +   + G 
Sbjct: 141 LGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGL 200
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           G +GL  ++  +A GA RII  D++  + + A+ LGA E      + +D    + ++   
Sbjct: 201 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKE 256
Query: 253 M-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREV 305
           M   G+D SF+ +G  D  M++ L      G   ++G+      +++ P         + 
Sbjct: 257 MTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKG 316
Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
            V G F+ +   P  +    + K  +  LITH   F  ++I + F++    G +I+ +  
Sbjct: 317 AVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLT 373
Query: 366 L 366
Sbjct: 374 F 374

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 164/377 (43%), Gaps = 58/377 (15%)
Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSD--VHHFKVKKLSTMRCANFIVKK 75
           AW  G K L I+   +      +V+++I A  +C +D  V   K + L+           
Sbjct: 16  AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAF---------- 64
Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
           P+++GHE AGI+E +G  V +++ GD+V       C  C  C +   NLC ++    SP 
Sbjct: 65  PVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPA 124
Query: 136 TNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAMCE-PL 169
           ++  L                          + VV    L  K+ D+ +LE   +     
Sbjct: 125 SDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLA-KIDDDANLERVCLLGCGF 183
Query: 170 SVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 228
           S G  A    A V P +   + G G +GL  ++  +A GA RII  D++ ++   A+ LG
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 229 ADETAK---VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC- 284
           A +      +   I++V  ++ K       G+D + DC G  +TM  AL+ T  G   C 
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTK------GGVDFALDCAGGSETMKAALDCTTAGWGSCT 297
Query: 285 LIGLAKTEMTVALTPAA---AREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF 339
            IG+A     + + P      R ++    G ++   + P  +   ++ K ++  L+TH  
Sbjct: 298 FIGVAAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTL 357
Query: 340 GFTQKEIEDAFEISAQG 356
            F +  I +AF++  QG
Sbjct: 358 PFDK--ISEAFDLMNQG 372

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
           AGI+E +G  V ++  GD+V       CG C +CK    N C +        T       
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 137 ---NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANV 181
               G   H  +  +    Y + D +S+ +     PL          S G   A + A V
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV 189
Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
              +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D
Sbjct: 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQD 245
Query: 242 VDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP 299
               + ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 300 -----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
                    +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 355 QGGNAIKVMFNL 366
           + G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 159/376 (42%), Gaps = 53/376 (14%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
           AGI+E +G  V ++  GD+V       CG C +CK    N C +               R
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
           F       G   H  +  +    Y + D +S+ +     PL          S G   A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
            A V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
           + +D    + ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
           ++ P         +  + G F+ + + P  +    + K  + PLITH   F  ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
           ++  + G +I+ +   
Sbjct: 360 DL-LRSGESIRTILTF 374

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 159/376 (42%), Gaps = 53/376 (14%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
           AGI+E +G  V ++  GD+V       CG C +CK    N C +               R
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
           F       G   H  +  +    Y + D +S+ +     PL          S G   A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
            A V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTV 295
           + +D    + ++   M + G+D SF+ +G   TM TAL+  +    V +I G+      +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
           ++ P         +  + G F+ + + P  +    + K  + PLITH   F  ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
           ++  + G +I+ +   
Sbjct: 360 DL-LRSGESIRTILTF 374

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 159/376 (42%), Gaps = 53/376 (14%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
           AGI+E +G  V ++  GD+V       CG C +CK    N C +               R
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
           F       G   H  +  +    Y + D +S+ +     PL          S G   A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
            A V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTV 295
           + +D    + ++   M + G+D SF+ +G   TM TAL+  +    V +I G+      +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
           ++ P         +  + G F+ + + P  +    + K  + PLITH   F  ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
           ++  + G +I+ +   
Sbjct: 360 DL-LRSGESIRTILTF 374

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 162/378 (42%), Gaps = 52/378 (13%)
Query: 19  WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMV 78
           W L  K   I+   +      +V++++ A+GICG+D H         +     +   P++
Sbjct: 15  WELK-KPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDH---------VVSGTMVTPLPVI 64
Query: 79  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 138
           +GHE AGI+E VG  V +++ GD+V       CG C +CK    N C  ++   S P  G
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYC--LKNDVSNP-QG 121
Query: 139 SLA---------HKVVHPAKLCYKLPDNVSLEEGAMCE-----PL----------SVGV- 173
           +L           K +H             ++E A+ +     PL          S G  
Sbjct: 122 TLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA 233
            A   A V P +   + G G +GL  ++  +A GA RII  D++  + + A+ LGA E  
Sbjct: 182 SAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE-- 239
Query: 234 KVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKT 291
               + +D    + ++   M   G+D SF+ +G  D  M++ L      G   ++G+   
Sbjct: 240 --CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPD 297
Query: 292 EMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI 346
              +++ P         +  ++G F+ +   P  +    + K  +  LITH   F  ++I
Sbjct: 298 SQNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKI 355
Query: 347 EDAFEISAQGGNAIKVMF 364
            + F++    G +I+ + 
Sbjct: 356 NEGFDL-LHSGKSIRTIL 372

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 53/376 (14%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
           AGI+E +G  V ++  GD+V       CG C +CK    N C +               R
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
           F       G   H  +  +    Y + D +S+ +     PL          S G   A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
            A V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
           + +D    + ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301
Query: 296 ALTPA---AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
           ++ P    + R     + G F+ + + P  +    + K  + PLITH   F  ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
           ++  + G +I+ +   
Sbjct: 360 DL-LRSGESIRTILTF 374

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 53/376 (14%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD           +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSD---------DQVVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
           AGI+E +G  V ++  GD+V       CG C +CK    N C +               R
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
           F       G   H  +  +    Y + D +S+ +     PL          S G   A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
            A V   +   + G G +GL  ++  +A GA RII  D++  R + A+ +GA E      
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
           + +D    + ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
           ++ P         +  + G F+ + + P  +    + K  + PLITH   F  ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
           ++  + G +I+ +   
Sbjct: 360 DL-LRSGESIRTILTF 374

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 45/372 (12%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
           AGI+E +G  V ++  GD+V       CG C +CK    N C +        T       
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 137 ---NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANV 181
               G   H  +  +    Y + D +S+ +     PL          S G   A + A V
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV 189
Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
              +   + G G  GL  ++  +A GA RII  D++  + + A+ +GA E      + +D
Sbjct: 190 TQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQD 245
Query: 242 VDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP 299
               + ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 300 -----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
                    +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 355 QGGNAIKVMFNL 366
           + G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 53/376 (14%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
           AGI+E +G  V ++  GD+V       CG C +CK    N C +               R
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
           F       G   H  +  +    Y + D +S+ +     PL          S G   A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
            A V   +   + G G  GL  ++  +A GA RII  D++  + + A+ +GA E      
Sbjct: 186 VAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
           + +D    + ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
           ++ P         +  + G F+ + + P  +    + K  + PLITH   F  ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
           ++  + G +I+ +   
Sbjct: 360 DL-LRSGESIRTILTF 374

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 157/372 (42%), Gaps = 45/372 (12%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H         +     +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
           AGI+E +G  V ++  GD+V       CG C +CK    N C +        T       
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 137 ---NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANV 181
               G   H  +  +    Y + D +S+ +     PL          S G   A + A V
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV 189
Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
              +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D
Sbjct: 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQD 245
Query: 242 VDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP 299
               + ++   M + G+D SF+ +G   TM TAL+  +   G   ++ +      +++ P
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMNP 305
Query: 300 -----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
                    +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 355 QGGNAIKVMFNL 366
           + G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 47/279 (16%)
Query: 38  PQ--DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           PQ  +V V++ A G+C +D+          +R   + V  P V+GHE +GIIE +G  V 
Sbjct: 29  PQGDEVLVKVVATGMCHTDL---------IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVT 79
Query: 96  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM--RFFGSPPTNGSLA-----------H 142
            L+VGD V L  G  CG C+ C  G+   C E   R F    + G+ A           H
Sbjct: 80  ELQVGDHVVLSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDH 138
Query: 143 KVVHPAKLCY---------KLPDNVSLEEGAMCEPLSVGVH----ACRRA-NVGPETNVM 188
                +   Y         K+  +V +E   +  PL  G+     AC  A  V P ++ +
Sbjct: 139 FFAQSSFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFV 195
Query: 189 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248
             G+G +GL  LLAA+  GA  II  D+   RL +A+ LGA  T  +++  +D    V  
Sbjct: 196 TWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA--THVINSKTQD---PVAA 250
Query: 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
           I+     G++ + +  G  + +   ++A    GK+ ++G
Sbjct: 251 IKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 153/382 (40%), Gaps = 52/382 (13%)
Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
           +E  K +   AW  G K L I+   +      +V+++I A  +C +D +        T+ 
Sbjct: 3   NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLS 53
Query: 68  CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
            A+     P+++GHE AGI+E VG  V  L+ GD V       CG C  C     NLC +
Sbjct: 54  GADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 113
Query: 128 MRFF---GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL------- 169
           +R     G  P   S        + H +       Y +  ++S+ +     PL       
Sbjct: 114 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 173
Query: 170 ---SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225
              S G   A   A + P +   + G G +GL  ++  +  GA RII  D++  + + A+
Sbjct: 174 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 233
Query: 226 NLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
             GA E      + +D    + ++   M   G+D SF+C+G  K M  AL A   G    
Sbjct: 234 EFGATE----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---- 285
Query: 285 LIGLAKTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPL 334
                   +  +    A R   ++    ++ T    W      P  +    S KI V   
Sbjct: 286 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF 345
Query: 335 ITHRFGFTQKEIEDAFEISAQG 356
           +TH   F   EI  AFE+   G
Sbjct: 346 VTHNLSF--DEINKAFELMHSG 365

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 153/382 (40%), Gaps = 52/382 (13%)
Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
           +E  K +   AW  G K L I+   +      +V+++I A  +C +D +        T+ 
Sbjct: 3   NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLS 53
Query: 68  CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
            A+     P+++GHE AGI+E VG  V  L+ GD V       CG C  C     NLC +
Sbjct: 54  GADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 113
Query: 128 MRFF---GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL------- 169
           +R     G  P   S        + H +       Y +  ++S+ +     PL       
Sbjct: 114 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 173
Query: 170 ---SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225
              S G   A   A + P +   + G G +GL  ++  +  GA RII  D++  + + A+
Sbjct: 174 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 233
Query: 226 NLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
             GA E      + +D    + ++   M   G+D SF+C+G  K M  AL A   G    
Sbjct: 234 EFGATE----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---- 285
Query: 285 LIGLAKTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPL 334
                   +  +    A R   ++    ++ T    W      P  +    S KI V   
Sbjct: 286 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF 345
Query: 335 ITHRFGFTQKEIEDAFEISAQG 356
           +TH   F   EI  AFE+   G
Sbjct: 346 VTHNLSF--DEINKAFELMHSG 365

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 153/382 (40%), Gaps = 52/382 (13%)
Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
           +E  K +   AW  G K L I+   +      +V+++I A  +C +D +        T+ 
Sbjct: 2   NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLS 52
Query: 68  CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
            A+     P+++GHE AGI+E VG  V  L+ GD V       CG C  C     NLC +
Sbjct: 53  GADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 112
Query: 128 MRFF---GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL------- 169
           +R     G  P   S        + H +       Y +  ++S+ +     PL       
Sbjct: 113 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 172
Query: 170 ---SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225
              S G   A   A + P +   + G G +GL  ++  +  GA RII  D++  + + A+
Sbjct: 173 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232
Query: 226 NLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
             GA E      + +D    + ++   M   G+D SF+C+G  K M  AL A   G    
Sbjct: 233 EFGATE----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---- 284
Query: 285 LIGLAKTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPL 334
                   +  +    A R   ++    ++ T    W      P  +    S KI V   
Sbjct: 285 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF 344
Query: 335 ITHRFGFTQKEIEDAFEISAQG 356
           +TH   F   EI  AFE+   G
Sbjct: 345 VTHNLSF--DEINKAFELMHSG 364

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 150/374 (40%), Gaps = 49/374 (13%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH-FKVKKLSTMRCANFIVKKPMVIGHE 82
           K L I+   +      +++++I A G+C +D++H F+ K              P+V+GHE
Sbjct: 19  KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF---------PVVLGHE 69
Query: 83  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------- 127
            AGI+E VG  V   + G++V       CG C  C++   N C +               
Sbjct: 70  GAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKET 129
Query: 128 ---------MRFFGSPPTNGSLAHKVVHPAKLCYKLP-DNVSLEEGAMCEPLSVGVHACR 177
                    ++F G+   +       +  AK+    P D V L    +       V+   
Sbjct: 130 RFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNT-- 187
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
            A V P +   + G G +GL  ++   + GA RII  D++  +   A+  GA +    + 
Sbjct: 188 -AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPND 246
Query: 238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK----TE 292
             E +   + K+ N    G+D S +CVG    M  AL +   G G   L+G         
Sbjct: 247 HSEPISQVLSKMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVAT 303
Query: 293 MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 352
             + L      +  + G F+ +   P  ++     K+ +   ITHR     + + DA ++
Sbjct: 304 RPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDL 361
Query: 353 SAQGGNAIKVMFNL 366
               G  I+ + +L
Sbjct: 362 MKH-GKCIRTVLSL 374

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 152/382 (39%), Gaps = 52/382 (13%)
Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
           +E  K +   AW  G K L I+   +      +V+++I A  +C +D +        T+ 
Sbjct: 2   NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLS 52
Query: 68  CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
            A+     P+++GH  AGI+E VG  V  L+ GD V       CG C  C     NLC +
Sbjct: 53  GADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 112
Query: 128 MRFF---GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL------- 169
           +R     G  P   S        + H +       Y +  ++S+ +     PL       
Sbjct: 113 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 172
Query: 170 ---SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225
              S G   A   A + P +   + G G +GL  ++  +  GA RII  D++  + + A+
Sbjct: 173 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232
Query: 226 NLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
             GA E      + +D    + ++   M   G+D SF+C+G  K M  AL A   G    
Sbjct: 233 EFGATE----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---- 284
Query: 285 LIGLAKTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPL 334
                   +  +    A R   ++    ++ T    W      P  +    S KI V   
Sbjct: 285 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF 344
Query: 335 ITHRFGFTQKEIEDAFEISAQG 356
           +TH   F   EI  AFE+   G
Sbjct: 345 VTHNLSF--DEINKAFELMHSG 364

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 152/372 (40%), Gaps = 49/372 (13%)
Query: 21  LGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIG 80
           L ++T+ + P         +V+++I A GICGSD    K    S         K P+++G
Sbjct: 22  LSLETITVAPPK-----AHEVRIKILASGICGSDSSVLKEIIPS---------KFPVILG 67
Query: 81  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 140
           HE  G++E +G+ V  ++ GD+V       CG C  CK+ + N C +            +
Sbjct: 68  HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADM 127
Query: 141 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-------VHAC--------------RRA 179
             +     K  Y L    +  E  +   ++V        + +C                A
Sbjct: 128 TSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTA 187
Query: 180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI 239
            V P +   + G G +G   ++  +A GA RII       +   A  LGA E      + 
Sbjct: 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE----CLNP 243
Query: 240 EDVDTDVGK-IQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK-----TE 292
           +D D  + + I      G+D + +C G  +TM  AL +T  G G   ++GLA        
Sbjct: 244 KDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPL 303
Query: 293 MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 352
             + L    + +  V G F+      L  ++++  KI+V  L++ +   T  +I  AFE+
Sbjct: 304 DPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTK--LTLDQINKAFEL 360
Query: 353 SAQGGNAIKVMF 364
            + G     +M 
Sbjct: 361 LSSGQGVRSIMI 372

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 151/357 (42%), Gaps = 46/357 (12%)
Query: 39  QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 98
           ++V+++I A GIC +D H  K            + K P+++GHE  GI+E +G  V +++
Sbjct: 34  KEVRIKILATGICRTDDHVIK---------GTMVSKFPVIVGHEATGIVESIGEGVTTVK 84
Query: 99  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------PTNGSLAHKVVHPAK 149
            GD+V       C  C+ C+    NLC      G              G   H  ++ + 
Sbjct: 85  PGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTST 144
Query: 150 LC-YKLPDNVSLEEGAMCEP----------LSVGV-HACRRANVGPETNVMIMGSGPIGL 197
              Y + D  S+ +     P           S G   A +   V P +  ++ G G +GL
Sbjct: 145 FTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGL 204
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 256
             ++  ++ GA RII  D++  +   A  +GA E        +D    + ++ + M G+ 
Sbjct: 205 SVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE----CISPKDSTKPISEVLSEMTGNN 260
Query: 257 IDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGI 310
           +  +F+ +G  +TM  AL +     G   ++G+  +   +   P         +  V G 
Sbjct: 261 VGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG 320
Query: 311 FRYRSTWP-LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
            + R   P L  EFL + K D+  LITH   F  K+I + FE+    G +I+ +   
Sbjct: 321 LKSRDDVPKLVTEFL-AKKFDLDQLITHVLPF--KKISEGFEL-LNSGQSIRTVLTF 373

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 152/357 (42%), Gaps = 46/357 (12%)
Query: 39  QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 98
           ++V+++I A GIC +D H  K            + K P+++GHE  GI+E +G  V +++
Sbjct: 34  KEVRIKILATGICRTDDHVIK---------GTMVSKFPVIVGHEATGIVESIGEGVTTVK 84
Query: 99  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG-----SPPTNGSLAHKVVHPAKLCYK 153
            GD+V       C  C+ C+    NLC      G        T  +   K VH       
Sbjct: 85  PGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTST 144
Query: 154 LPDNVSLEEGAMCE------PLSVGVHAC----------RRANVGPETNVMIMGSGPIGL 197
             +   ++E ++ +      P  V +  C          +   V P +  ++ G G +GL
Sbjct: 145 FTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGL 204
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 256
             ++  ++ GA RII  D++  +   A  +GA E        +D    + ++ + M G+ 
Sbjct: 205 SVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE----CISPKDSTKPISEVLSEMTGNN 260
Query: 257 IDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGI 310
           +  +F+ +G  +TM  AL +     G   ++G+  +   +   P         +  V G 
Sbjct: 261 VGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG 320
Query: 311 FRYRSTWP-LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
            + R   P L  EFL + K D+  LITH   F  K+I + FE+    G +I+ +   
Sbjct: 321 LKSRDDVPKLVTEFL-AKKFDLDQLITHVLPF--KKISEGFEL-LNSGQSIRTVLTF 373

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 145/356 (40%), Gaps = 52/356 (14%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
           +LGI  +      +P  GP D  VR  AL  C SD H        T+       +  M++
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTH--------TVWAGAIGDRHDMIL 57
Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
           GHE  G I +VGS VK L+VGD+V + P I+           Y +       G   +N  
Sbjct: 58  GHEAVGQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFK 116
Query: 138 GSLAHKVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETNVMIMGS 192
             +  +V H     A L   LP ++  E+  M   + + G H    AN+     V ++G 
Sbjct: 117 DGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGI 175
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           GP+GL+++  A   GA RI           IA   GA  T  ++    D+   + K  + 
Sbjct: 176 GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD- 232
Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTV-------- 295
            G G+D      G   T + A+   +PG   G V  +G      + ++E  V        
Sbjct: 233 -GKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIH 291
Query: 296 -ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
             LTP     ++ +               + +GK+D   LITHRF   +K +EDA 
Sbjct: 292 GGLTPGGRVRMEKLA------------SLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 54/313 (17%)
Query: 15  NMAAWLLGIKTLKIQPYHLPTLGPQDVKV------RIKALGICGSDVHHFKVKKLSTMRC 68
           N +    G + L+++    P L   + K+      ++ +  ICGSD H ++         
Sbjct: 3   NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR--------- 53
Query: 69  ANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC--- 125
             FIV K  V+GHE  G + E GS+V+ +++GD V++   ++CG C  CK    ++C   
Sbjct: 54  GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENN 113
Query: 126 ---PEMRF----FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEG-----AMCEPLSV 171
              P+       F     +G  A  V+ P    +  K  D     E       + + L  
Sbjct: 114 LVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPT 173
Query: 172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231
           G H C  A V P ++V I G+GP+G      AR  GA  +I+ D + +RL +  + G + 
Sbjct: 174 GFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFET 233
Query: 232 -TAKVSTDIED-VDTDVGKIQNAMGSGIDVSFDCVGFD----------KTMSTALNA--- 276
              + S  + D +D  +GK +      +D   D VGF+          +T + ALN+   
Sbjct: 234 IDLRNSAPLRDQIDQILGKPE------VDCGVDAVGFEAHGLGDEANTETPNGALNSLFD 287
Query: 277 -TRPGGKVCLIGL 288
             R GG + + G+
Sbjct: 288 VVRAGGAIGIPGI 300

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 145/356 (40%), Gaps = 52/356 (14%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
           +LGI  +      +P  GP D  VR  AL  C SD H        T+       +  M++
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTH--------TVWAGAIGDRHDMIL 57
Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
           GHE  G I +VGS VK L+VGD+V + P I+           Y +       G   +N  
Sbjct: 58  GHEAVGQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFK 116
Query: 138 GSLAHKVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETNVMIMGS 192
             +  +V H     A L   LP ++  E+  M   + + G H    AN+     V ++G 
Sbjct: 117 DGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGI 175
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           GP+GL+++  A   GA RI           IA   GA  T  ++    D+   + K  + 
Sbjct: 176 GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD- 232
Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTV-------- 295
            G G+D      G   T + A+   +PG   G V  +G      + ++E  V        
Sbjct: 233 -GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHIH 291
Query: 296 -ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
             LTP     ++ +               + +GK+D   LITHRF   +K +EDA 
Sbjct: 292 GGLTPGGRVRMEKLA------------SLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
           +LGI  L       P  G  D  VR  A+  C SD+H      L          +K M++
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--------RKNMIL 57
Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
           GHE  G + EVGSEVK  + GDRV + P  +    SL     +         G   +N  
Sbjct: 58  GHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116
Query: 138 ----GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMG 191
               G   H  V+ A +    LP ++ LE   M  + ++ G H    A++     V ++G
Sbjct: 117 DGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLG 174
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
            GP+GL+ +  A+  GA RII        +  A+  GA       TDI  V+   G I++
Sbjct: 175 IGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIES 225
Query: 252 AM-----GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
            +     G G+D +    G    M+TA+   +PGG + 
Sbjct: 226 QIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIA 263

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 139/357 (38%), Gaps = 82/357 (22%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP D  VR  A+  C SD+H        T+       +  M++GHE  G + EVGSE
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
           VK  + GDRV +         S  + G +     M                FF     + 
Sbjct: 72  VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
           +LAH           LP  + LE   M  + ++ G H    A++     V ++G GP+GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM---- 253
           + +  A+  GA RII        +  A+  GA       TDI  V+   G I++ +    
Sbjct: 181 MAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIESQIMNLT 231
Query: 254 -GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMT 294
            G G+D +    G    M+TA+   +PGG +  +                  G+A   + 
Sbjct: 232 EGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIK 291
Query: 295 VALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
             L P            R R    + + F +  ++D   L+TH F GF    IE AF
Sbjct: 292 GGLCPGG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 139/357 (38%), Gaps = 82/357 (22%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP D  VR  A+  C SD+H        T+       +  M++GHE  G + EVGSE
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
           VK  + GDRV +         S  + G +     M                FF     + 
Sbjct: 72  VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
           +LAH           LP  + LE   M  + ++ G H    A++     V ++G GP+GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM---- 253
           + +  A+  GA RII        +  A+  GA       TDI  V+   G I++ +    
Sbjct: 181 MAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIESQIMNLT 231
Query: 254 -GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMT 294
            G G+D +    G    M+TA+   +PGG +  +                  G+A   + 
Sbjct: 232 EGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIK 291
Query: 295 VALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
             L P            R R    + + F +  ++D   L+TH F GF    IE AF
Sbjct: 292 GGLCPGG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 57/328 (17%)
Query: 15  NMAAWLLGIKTLKIQPYHLPTL-GPQDVKV------RIKALGICGSDVHHFKVKKLSTMR 67
           N     LG   +++Q    P +  P+  K+      ++ +  ICGSD H   V+  +T +
Sbjct: 3   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQH--MVRGRTTAQ 60
Query: 68  CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
                    +V+GHE  G + E G +V++L++GD V++   ++CG C  CK     +C  
Sbjct: 61  VG-------LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLT 113
Query: 128 MR---------FFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEG-----AMCEPLSV 171
           +          +       G  A  V+ P       KLPD     E       + + L  
Sbjct: 114 VNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPT 173
Query: 172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231
           G H    A VGP + V + G+GP+GL    +AR  GA  +I+ D++  RL+ A+  G  E
Sbjct: 174 GYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-E 232
Query: 232 TAKVSTDI---EDVDTDVGKIQNAMGSGIDVSFDCVGFD-----------KTMSTALNA- 276
            A +S D    E +   +G+ +      +D + D VGF+           +  +T LN+ 
Sbjct: 233 IADLSLDTPLHEQIAALLGEPE------VDCAVDAVGFEARGHGHEGAKHEAPATVLNSL 286
Query: 277 ---TRPGGKVCLIGLAKTEMTVALTPAA 301
              TR  GK+ + GL  TE   A+  AA
Sbjct: 287 MQVTRVAGKIGIPGLYVTEDPGAVDAAA 314

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 137/299 (45%), Gaps = 29/299 (9%)
Query: 19  WLLGIKTLKIQPYHLP--TLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
           W    ++  + P++      G +DV+ ++   G+C SD+H  K     +M         P
Sbjct: 20  WAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMY--------P 71
Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM------R 129
           +V GHE  G + EVGS+VK + VGD+V +   + +C  C  C     N CP+M       
Sbjct: 72  LVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASI 131
Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNV 187
           +     T G  ++ +V   +   + PDN+ L+ GA  +C  ++V           P  ++
Sbjct: 132 YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHI 191
Query: 188 MIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247
            I+G G +G V +  A+AFG+   +I+    ++    +N GAD +  VS D E       
Sbjct: 192 GIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-SFLVSRDQE------- 243
Query: 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV-ALTPAAAREV 305
           ++Q A G+ +D   D V     +       +  GK+ L+G  +  + + A +  A R++
Sbjct: 244 QMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKI 301

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 23/317 (7%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFK-VKKLSTMRCANFIVKKPMVIGHECA 84
           L I+  ++P    ++V +RI   G+C +D+  +K V+     R        P+++GHE A
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRL-------PIILGHENA 68
Query: 85  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 144
           G I EVG E+  ++ GD V +        C  C+ G +N+C      G     G   + +
Sbjct: 69  GTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYML 127
Query: 145 VHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA----NVGPETNVMIMGSGPIGLVTL 200
           V  ++   KL     +E   + +  +  + A R+A    +   E  V++ G G + + T+
Sbjct: 128 VKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTI 187
Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
              +A       IT V + R    R+   +  A   ++++D ++ + K+ + +G+ I  +
Sbjct: 188 QILKALMKN---ITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASI--A 242
Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL- 319
            D VG ++T           G + L+G+    +++     A     ++G   Y S   L 
Sbjct: 243 IDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLG-SNYGSLNDLE 301
Query: 320 -CIEFLRSGKIDVKPLI 335
             +    SGKI  KP I
Sbjct: 302 DVVRLSESGKI--KPYI 316

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 120/276 (43%), Gaps = 25/276 (9%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
           +LGI  L       P  G  D  VR  A+  C SD+H      L          +K M++
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--------RKNMIL 57
Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
           GHE  G + EVGSEVK  + GDRV + P  +    SL     +         G   +N  
Sbjct: 58  GHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116
Query: 138 ----GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMG 191
               G   H  V+ A +    LP ++ LE   M  + ++ G H    A++   ++V+++G
Sbjct: 117 DGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIG 174
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST-DIEDVDTDVGKIQ 250
            G +GL+ +  A+  GA RII        +  A+  GA +        IED    V K+ 
Sbjct: 175 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIED---QVMKLT 231
Query: 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286
           N  G G+D      G  +T+S A+   +PGG +  I
Sbjct: 232 N--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNI 265

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 23/275 (8%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
           +LGI  L       P  G  D  VR  A+  C SD+H      L          +K M++
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--------RKNMIL 57
Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
           GHE  G + EVGSEVK  + GDRV + P  +    SL     +         G   +N  
Sbjct: 58  GHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116
Query: 138 ----GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMG 191
               G   H  V+ A +    LP ++ LE   M  + ++ G H    A++   ++V+++G
Sbjct: 117 DGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIG 174
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
            G +GL+ +  A+  GA RII        +  A+  GA +          +   V K+ N
Sbjct: 175 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN 232
Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286
             G G+D      G  +T+S A++  +PGG +  I
Sbjct: 233 --GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNI 265

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 138/352 (39%), Gaps = 72/352 (20%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP D  VR  A+  C SD+H        T+       +  M++GHE  G + EVGSE
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
           VK  + GDRV +         S  + G +     M                FF     + 
Sbjct: 72  VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
           +LAH           LP  + LE   M  + ++ G H    A++   ++V+++G G +GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
           + +  A+  GA RII        +  A+  GA +          +   V K+ N  G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMTVALTP 299
           D      G  +T+S A++  +PGG +  I                  G+A   +   L P
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 300 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
                       R R    + + F +  ++D   L+TH F GF    IE AF
Sbjct: 297 GG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 137/352 (38%), Gaps = 72/352 (20%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP D  VR  A+  C SD+H        T+       +  M++GHE  G + EVGSE
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
           VK  + GDRV +         S  + G +     M                FF     + 
Sbjct: 72  VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
           +LAH           LP  + LE   M  + ++ G H    A++   ++V+++G G +GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
           + +  A+  GA RII        +  A+  GA +          +   V K+ N  G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMTVALTP 299
           D      G  +T+S A+   +PGG +  I                  G+A   +   L P
Sbjct: 237 DRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 300 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
                       R R    + + F +  ++D   L+TH F GF    IE AF
Sbjct: 297 GG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
           +LGI  L       P  G  D  VR  A+  C SD+H      L          +K M++
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--------RKNMIL 57
Query: 80  GHECAGIIEEVGSEVKSLEVGDRV----------ALE-----PGISCGHCSLCKAGSYNL 124
           GHE  G + EVGSEVK  + GDRV          +LE     P  S G  +  K  ++  
Sbjct: 58  GHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKD 117
Query: 125 CPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGP 183
                +F     + +LA            LP ++ LE   M  + ++ G H    A++  
Sbjct: 118 GVFGEYFHVNDADMNLA-----------ILPKDMPLENAVMITDMMTTGFHGAELADIQM 166
Query: 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD 243
            ++V+++G G +GL+ +  A+  GA RII        +  A+  GA +          + 
Sbjct: 167 GSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIV 224
Query: 244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286
             V K+ N  G G+D      G  +T+S A++  +PGG +  I
Sbjct: 225 DQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNI 265

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 133/343 (38%), Gaps = 54/343 (15%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP D  VR  A+  C SD+H        T+       +  M++GHE  G + EVGSE
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
           VK  + GDRV +         S  + G +     M                FF     + 
Sbjct: 72  VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
           +LAH           LP  + LE   M  + ++ G H    AN+     V ++G GP+GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
           +++  A   GA RI           IA   GA  T  ++    D+   + K  +  G G+
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD--GKGV 236
Query: 258 DVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTVALTPAAAREVDVI 308
           D      G   T + A+   +PG   G V  +G      + ++E  V +           
Sbjct: 237 DKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCP 296
Query: 309 GIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
           G    R      I+ +   ++D   L+TH F GF    IE AF
Sbjct: 297 G---GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 117/256 (45%), Gaps = 44/256 (17%)
Query: 37  GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
           GPQ V VR KA+G+   D ++      S +  A F+   P  +G E AG++E VG EV  
Sbjct: 27  GPQAVVVRNKAIGLNFIDTYY-----RSGLYPAPFL---PSGLGAEGAGVVEAVGDEVTR 78
Query: 97  LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 156
            +VGDRVA                          +G+ P  G+ +   V P     KL D
Sbjct: 79  FKVGDRVA--------------------------YGTGPL-GAYSEVHVLPEANLVKLAD 111
Query: 157 NVSLEEGA--MCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTLLAARAFGAPRIII 213
           +VS E+ A  M + L+V     +   V P E  +    +G +G +    A+A GA ++I 
Sbjct: 112 SVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIG 170
Query: 214 TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 273
           T    ++ + A+ LGA ET   S   EDV   V ++ +  G    V +D VG D T  T+
Sbjct: 171 TVSSPEKAAHAKALGAWETIDYSH--EDVAKRVLELTD--GKKCPVVYDGVGQD-TWLTS 225
Query: 274 LNATRPGGKVCLIGLA 289
           L++  P G V   G A
Sbjct: 226 LDSVAPRGLVVSFGNA 241

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 37  GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
           GP  V++R  A+G+   D +H      + +     + + P+V+G E A ++EEVG  V  
Sbjct: 27  GPGQVRLRNTAIGVNFLDTYH-----RAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD 81
Query: 97  LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 156
             VG+RV          C+                   P  G+ + + ++PA+   K+P 
Sbjct: 82  FTVGERV----------CTCL-----------------PPLGAYSQERLYPAEKLIKVPK 114
Query: 157 NVSLEE----GAMCEPLSVGVHACRRANVGPETNVMI-MGSGPIGLVTLLAARAFGAPRI 211
           ++ L++    G M + ++      +   V P   V+I   +G +G + +  AR  GA  +
Sbjct: 115 DLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TV 173
Query: 212 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 271
           I T    ++   AR LG   T   ST  +D    V +I    G G+DV +D +G D T+ 
Sbjct: 174 IGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVYDSIGKD-TLQ 228
Query: 272 TALNATRPGGKVCLIGLA 289
            +L+  RP G     G A
Sbjct: 229 KSLDCLRPRGMCAAYGHA 246

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 41/277 (14%)
Query: 36  LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
           +GP+DV + I   GIC SD+H       S  +   +    PM+ GHE AGII+EVG  VK
Sbjct: 27  VGPRDVLIDILYAGICHSDIH----SAYSEWKEGIY----PMIPGHEIAGIIKEVGKGVK 78
Query: 96  SLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM--------RFFGSPPTNGSLAHKVVH 146
             ++GD V +   + SC  C  CK      C ++         F  + P  G  ++ +V 
Sbjct: 79  KFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVV 138
Query: 147 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 204
                  +  N  LE+ A  +C  ++      + + V   T V + G G +G + +  A 
Sbjct: 139 DENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV 197
Query: 205 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG---SGIDVSF 261
           A GA      +V V     ARN    + A +S  ++   TD  + +  +    S I   +
Sbjct: 198 AMGA------EVSV----FARNEHKKQDA-LSMGVKHFYTDPKQCKEELDFIISTIPTHY 246
Query: 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT 298
           D   + K ++         G + L+GL   E+   L+
Sbjct: 247 DLKDYLKLLTY-------NGDLALVGLPPVEVAPVLS 276

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 87/208 (41%), Gaps = 25/208 (12%)
Query: 37  GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
           GP DVK+ I   G+C SD+H  + +   T+         P V GHE  G +  VG +V+ 
Sbjct: 46  GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY--------PCVPGHEIVGRVVAVGDQVEK 97
Query: 97  LEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK--------VVHP 147
              GD V +   + SC HC  C+ G  N C  M    + PT     H         VVH 
Sbjct: 98  YAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHE 157
Query: 148 AKLCYKLPDNVSLEEGAMCEPLSVG----VHACRRANVGPETNVMIMGSGPIGLVTLLAA 203
               Y L      E+ A   PL           R    GP   V ++G G +G + +  A
Sbjct: 158 R---YVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLA 214
Query: 204 RAFGAPRIIITDVDVQRLSIARNLGADE 231
            A GA  +  T  + +R   A+ LGADE
Sbjct: 215 HAMGAHVVAFTTSEAKR-EAAKALGADE 241

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 20/268 (7%)
Query: 27  KIQPYHLPTLGPQ--DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECA 84
           K++   +P   P+  ++ + +K  G+C +D+H +              VK P+V GHE A
Sbjct: 17  KLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGD-------WPLPVKLPLVGGHEGA 69
Query: 85  GIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
           G++  +G  VK  ++GD   ++    SC  C  C+ G+ + CP     G    +GS    
Sbjct: 70  GVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQY 128
Query: 144 VVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTL 200
               A     +P    L + A  +C  ++V   A + AN+     V I G +G +G + +
Sbjct: 129 ATADAVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGLGSLAV 187
Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
             A+A G  R++  D    +  + R++G +    V  D       VG +  A   G    
Sbjct: 188 QYAKAMGY-RVLGIDGGEGKEELFRSIGGE----VFIDFTKEKDIVGAVLKATDGGAHGV 242
Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGL 288
            +    +  +  +    R  G   L+G+
Sbjct: 243 INVSVSEAAIEASTRYVRANGTTVLVGM 270

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 51/271 (18%)
Query: 22  GIKTLKIQPYHLPTLGPQD--VKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
           G+  L++    +P   PQD  +K+R+KA   CG +     V++ +         K P+V 
Sbjct: 14  GLNKLRLFRKAMPE--PQDGELKIRVKA---CGLNFIDLMVRQGNIDNPP----KTPLVP 64
Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
           G EC+GI+E +G  VK  E+GDRV                        M F        +
Sbjct: 65  GFECSGIVEALGDSVKGYEIGDRV------------------------MAFV----NYNA 96
Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
            A  V  P +  YK+PD++S  E A      ++  V     AN+    +V++  +G  G+
Sbjct: 97  WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG-GV 155
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQNAMGSG 256
              +A      P + +          A     +      T + D + D V +++     G
Sbjct: 156 GQAVAQLCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEG 208
Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
           +D+  DC+  D T    L+  +P G   L G
Sbjct: 209 VDIVLDCLCGDNT-GKGLSLLKPLGTYILYG 238

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 132/315 (41%), Gaps = 42/315 (13%)
Query: 9   EGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC 68
           EG   Q+   W    K  K   Y        D+ ++I+A G+CGSD+H       +    
Sbjct: 8   EGIAIQSHEDW----KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH------CAAGHW 57
Query: 69  ANFIVKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGI-SCGHCSLCKAGSYNLCP 126
            N  +K P+V+GHE  G + ++G +  S L+VG RV +   + SC  C  CK  +   C 
Sbjct: 58  GN--MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT 115
Query: 127 EMRFFGSPP------TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRR 178
           +     S P      + G  A+ V         +P+N+     A  +C  L+V      R
Sbjct: 116 KFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTV-YSPLVR 174
Query: 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 238
              GP   V I+G G IG +  L ++A GA   +I+    +R   A  +GAD    ++T 
Sbjct: 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED-AMKMGADHY--IAT- 230
Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAKTE 292
           +E+ D          G     +FD +        D   +    A + GG++  I + +  
Sbjct: 231 LEEGD---------WGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH 281
Query: 293 MTVALTPAAAREVDV 307
             ++L P   + V +
Sbjct: 282 EMLSLKPYGLKAVSI 296

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 118/294 (40%), Gaps = 41/294 (13%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM-------RCANFIVKKP 76
           K++ +    +P LGP +  V + A  +  + VH    + LST        R ++   +  
Sbjct: 56  KSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHD 115
Query: 77  M---VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRF 130
           +   VIG + AG++   G  V + + GD V       C    L  +  +N   L PE R 
Sbjct: 116 LPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRI 171
Query: 131 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPE 184
           +G     G LA   +  +      PD++S EE A   P  V   A R+      A +   
Sbjct: 172 WGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQG 229
Query: 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDI 239
            NV+I G SG +G      A A GA  I +     Q+  I R +GA    D  A+     
Sbjct: 230 DNVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRAMGAEAIIDRNAEGYRFW 288
Query: 240 EDVDTDVGKIQNAM---------GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
           +D +T   K              G  ID+ F+  G  +T   ++  TR GG + 
Sbjct: 289 KDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTIT 341

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 49/274 (17%)
Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
           G   +K + Y +P++  +++ ++ K  G+   +         S  R   +  +KP V+G 
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIE---------SYFRKGIYPCEKPYVLGR 69
Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E +G +   G  V + EVGD+VA     +    S   +      P M             
Sbjct: 70  EASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQG----PVM------------- 112
Query: 142 HKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACRRANVGPETNVMIMGS-GPI 195
                      KLP   S EE       + + L+         +V     V++  + G +
Sbjct: 113 -----------KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGV 161
Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
           GL+     +  GA  I +   D ++L IA+  GA+     S   ED+   V K  N  G 
Sbjct: 162 GLILNQLLKMKGAHTIAVASTD-EKLKIAKEYGAEYLINASK--EDILRQVLKFTN--GK 216
Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289
           G+D SFD VG D T   +L A +  G     G A
Sbjct: 217 GVDASFDSVGKD-TFEISLAALKRKGVFVSFGNA 249

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 132/327 (40%), Gaps = 33/327 (10%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
           LK+    +P  G  D+ VR  A+ +   D       KL         +  P V   + +G
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRD-------KLVLETGXGLDLAFPFVPASDXSG 93
Query: 86  IIEEVGSEVKSLEVGDRV--ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
           ++E VG  V     GDRV     PG   G     + G+          G+ P  G L+  
Sbjct: 94  VVEAVGKSVTRFRPGDRVISTFAPGWLDG----LRPGTGRTPAYETLGGAHP--GVLSEY 147
Query: 144 VVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 201
           VV P       P ++   E +   C  L+       + ++     V++ G+G + L  L 
Sbjct: 148 VVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQ 207
Query: 202 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQNAMGS-GIDV 259
            A+A GA  +I+T    ++L  A  LGAD        I  ++ D V ++    G  G D 
Sbjct: 208 IAKATGA-EVIVTSSSREKLDRAFALGADH------GINRLEEDWVERVYALTGDRGADH 260
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAARE--VDVIGIFRYRST 316
             +  G    +  +L A  P G++ +IG L   E++  + P   +   V  I +   R+ 
Sbjct: 261 ILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRAL 319
Query: 317 WPLCIEFLRSGKIDVKPLITHRFGFTQ 343
             L     R G   +KP+I  R+ FT+
Sbjct: 320 EDLVGAVDRLG---LKPVIDXRYKFTE 343

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 39/170 (22%)
Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           + K P V+G +  G++E VG+EV     GD V                          + 
Sbjct: 56  VSKAPRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------YYS 90
Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-----------VGVHACRRAN 180
           GSP  NGS A   +   +L  K P N+S E+ A+  PL+            G+   R  N
Sbjct: 91  GSPDQNGSNAEYQLINERLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNEN 149
Query: 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230
            G +T ++I G+G +G +    A+A+G  R+I T    + +   + +GAD
Sbjct: 150 EG-KTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197

>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 123/278 (44%), Gaps = 27/278 (9%)
Query: 31  YHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90
           Y L   GP+DV +RI   GIC +D+H  K    + +  +N+    PMV GHE  G + EV
Sbjct: 27  YTLRETGPEDVNIRIICCGICHTDLHQTK----NDLGMSNY----PMVPGHEVVGEVVEV 78
Query: 91  GSEVKSLEVGD-RVALEPGISCGHCSLCKAGSYNLCPEM------RFFGSPPTNGSLAHK 143
           GS+V    VGD          CG CS C+      CP+        +    PT G  A  
Sbjct: 79  GSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKA 138
Query: 144 VVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 201
            V   K   K+P+ +++E+ A  +C  ++V           P     I+G G +G + + 
Sbjct: 139 TVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVK 198
Query: 202 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261
            A+A G    +I+  + +R    ++LGAD+          + +D  K+ + +   +D   
Sbjct: 199 IAKAMGHHVTVISSSNKKREEALQDLGADDYV--------IGSDQAKM-SELADSLDYVI 249
Query: 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP 299
           D V     +   L+  +  GK+ L+G+    +   LTP
Sbjct: 250 DTVPVHHALEPYLSLLKLDGKLILMGVINNPLQF-LTP 286

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 54/288 (18%)
Query: 38  PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI---GHECAGIIEEVGSEV 94
           P+D +V IK        VH   V  + T   +    +KP++    G + AG+IE VG   
Sbjct: 55  PKDHQVLIK--------VHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA 106
Query: 95  KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 154
            + + GDRV     IS G+     A  + +                           YKL
Sbjct: 107 SAFKKGDRVFTSSTISGGYAEYALAADHTV---------------------------YKL 139
Query: 155 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRI 211
           P+ +  ++GA    P      A    A V    +V++ G SG +GL     ARA+G  +I
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KI 198
Query: 212 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTM 270
           + T    +   I    GA E      ++  +D    KI+  +G  GID+  + +  +  +
Sbjct: 199 LGTAGTEEGQKIVLQNGAHEVFN-HREVNYID----KIKKYVGEKGIDIIIEMLA-NVNL 252
Query: 271 STALNATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIGIFRYRST 316
           S  L+    GG+V ++G   +  T+ + P    A+E  +IG+  + ST
Sbjct: 253 SKDLSLLSHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLFSST 297

>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form Length = 366

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 29/204 (14%)
Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVK-KLSTMRCANFIVKKPMVIG 80
           G++   +    L + G   +K+R    GICG+D      K  LST+       K  +V+G
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKG----KDFLVLG 65
Query: 81  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNG 138
           HE  G++EE          GD V       CG C  C  G  + C    F   G    +G
Sbjct: 66  HEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDG 122
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHACRRANVGP 183
            +        K   K+P ++  + G + +PL+               V V  C    +  
Sbjct: 123 FMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNC 181
Query: 184 ETNVMIMGSGPIGLVTLLAARAFG 207
              V+++G+GPIG++  L  R +G
Sbjct: 182 R-KVLVVGTGPIGVLFTLLFRTYG 204

>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex With Nadp And Glucose Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 29/204 (14%)
Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVK-KLSTMRCANFIVKKPMVIG 80
           G++   +    L + G   +K+R    GICG+D      K  LST+       K  +V+G
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKG----KDFLVLG 65
Query: 81  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNG 138
           HE  G++EE          GD V       CG C  C  G  + C    F   G    +G
Sbjct: 66  HEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDG 122
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHACRRANVGP 183
            +        K   K+P ++  + G + +PL+               V V  C    +  
Sbjct: 123 FMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNC 181
Query: 184 ETNVMIMGSGPIGLVTLLAARAFG 207
              V+++G+GPIG++  L  R +G
Sbjct: 182 R-KVLVVGTGPIGVLFTLLFRTYG 204

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 34/187 (18%)
Query: 10  GDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA 69
           G +   + A+     ++ +    +P L   D+ V+ +A+GI   D   +K  K + +  +
Sbjct: 1   GXEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVD---WKFIKANPINWS 57
Query: 70  NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR 129
           N       V G + AG+I +VG++V S  +G RVA        H SL +           
Sbjct: 58  N-----GHVPGVDGAGVIVKVGAKVDSKXLGRRVAY-------HTSLKR----------- 94
Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVM 188
                  +GS A   V        LPDN+S E  A    PL     A  +  +  +  V+
Sbjct: 95  -------HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVL 147
Query: 189 IMGSGPI 195
           I+G G +
Sbjct: 148 IVGFGAV 154

>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI----SCGHCSLCKAGSYNLCPEMRFF- 131
           +V+GHE  G++  V      LE GD V   P +    + G     +    ++ P+  +F 
Sbjct: 59  LVLGHEAVGVV--VDPNDTELEEGDIVV--PTVRRPPASGTNEYFERDQPDMAPDGMYFE 114
Query: 132 -GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG------VHACRRANVGPE 184
            G    +G ++     P K   ++P + + E G + EP+S+        +A R A     
Sbjct: 115 RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDP 173
Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKV-----STD 238
           ++  ++G+G +GL+TL   +        + D   + L  + R    D T  +     +T 
Sbjct: 174 SSAFVLGNGSLGLLTLAMLK--------VDDKGYENLYCLGRRDRPDPTIDIIEELDATY 225
Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
           ++   T V  + +     +D  ++  GF K    ++ A  P G   L+G+
Sbjct: 226 VDSRQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPNGVGALLGV 274

>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI----SCGHCSLCKAGSYNLCPEMRFF- 131
           +V+GHE  G++  V      LE GD V   P +    + G     +    ++ P+  +F 
Sbjct: 59  LVLGHEAVGVV--VDPNDTELEEGDIVV--PTVRRPPASGTNEYFERDQPDMAPDGMYFE 114
Query: 132 -GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG------VHACRRANVGPE 184
            G    +G ++     P K   ++P + + E G + EP+S+        +A R A     
Sbjct: 115 RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDP 173
Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKV-----STD 238
           ++  ++G+G +GL+TL   +        + D   + L  + R    D T  +     +T 
Sbjct: 174 SSAFVLGNGSLGLLTLAMLK--------VDDKGYENLYCLGRRDRPDPTIDIIEELDATY 225
Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
           ++   T V  + +     +D  ++  GF K    ++ A  P G   L+G+
Sbjct: 226 VDSRQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPNGVGALLGV 274

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	366
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-167
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-164
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-158
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-148
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-148
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-145
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-138
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-122
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-118
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	7e-97
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	7e-86
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	7e-73
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	2e-69
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-65
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-60
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	8e-57
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	6e-55
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	3e-51
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	6e-51
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	6e-50
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	9e-50
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	7e-48
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	2e-47
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	6e-47
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-46
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	5e-45
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	3e-44
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-44
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-43
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	4e-42
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	2e-41
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	3e-34
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	6e-34
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	7e-34
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-33
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	3e-33
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-32
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	9e-30
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-29
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	3e-29
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	7e-29
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-28
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	5e-28
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	8e-28
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	9e-28
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-27
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	5e-27
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	8e-27
4eye_A	342	Probable oxidoreductase; structural genomics, niai	9e-27
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-26
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-26
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-24
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	4e-23
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-22
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-22
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	7e-22
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-21
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	4e-21
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-16
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-15
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	2e-08
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	7e-08
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	5e-06
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-05
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	7e-04

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  468 bits (1208), Expect = e-167
 Identities = 156/354 (44%), Positives = 224/354 (63%), Gaps = 10/354 (2%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++       R  NF
Sbjct: 5   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWE-----YGRIGNF 59

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F 
Sbjct: 60  IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 119

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GPIG+VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++ 
Sbjct: 180 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 237

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
            +G   +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+F
Sbjct: 238 QLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVF 297

Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
           RY +TWP+ I  L S  ++VKPL+THRF    ++  +AFE   + G  +K+M  
Sbjct: 298 RYCNTWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFET-FKKGLGLKIMLK 348

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  462 bits (1191), Expect = e-164
 Identities = 158/354 (44%), Positives = 233/354 (65%), Gaps = 9/354 (2%)

Query: 13  NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI 72
           + N++A L     L+++   +P     +V +++  +GICGSDVH+++       R A+FI
Sbjct: 3   SDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYE-----HGRIADFI 57

Query: 73  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 132
           VK PMVIGHE +G + +VG  VK L+ GDRVA+EPG+ C  C  CK G YNLCP++ F  
Sbjct: 58  VKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCA 117

Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS 192
           +PP +G+LA   VH A  C+KLPDNVSLEEGA+ EPLSVGVHACRRA V   T V+++G+
Sbjct: 118 TPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGA 177

Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           GPIGLV++LAA+A+GA  ++ T    +RL +A+N GAD T  V    E+  + + +I++A
Sbjct: 178 GPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSA 236

Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR 312
           +G   +V+ DC G +K ++  +N TR GG + L+G+    +TV L  A ARE+D+  +FR
Sbjct: 237 IGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFR 296

Query: 313 YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFN 365
           Y + +P+ +E + SG+ +VK L+TH F    ++  DAFE + +   N IKVM +
Sbjct: 297 YCNDYPIALEMVASGRCNVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMIS 348

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  446 bits (1149), Expect = e-158
 Identities = 126/359 (35%), Positives = 190/359 (52%), Gaps = 17/359 (4%)

Query: 14  QNMAAWLLGIKTLKIQPYHL--------PTLGPQDVKVRIKALGICGSDVHHFKVKKLST 65
            N+  +      L I               L   +V V +++ GICGSDVH +K      
Sbjct: 8   TNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWK-----H 62

Query: 66  MRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 125
                 IV+   V+GHE AG +  V   VKS++VGDRVA+EP + C  C  C  G YN C
Sbjct: 63  GCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGC 122

Query: 126 PEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPET 185
             + F  +PP  G L   V HPA  C+K+ + +S E GAM EPLSV +   +RA V    
Sbjct: 123 ERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAGVRLGD 181

Query: 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245
            V+I G+GPIGL+T+L A+A GA  ++ITD+D  RL  A+ +  +        +   ++ 
Sbjct: 182 PVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESA 241

Query: 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREV 305
              +++  G    V+ +C G + +++ A+ A + GGKV +IG+ K E+ +    A+ REV
Sbjct: 242 KKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREV 301

Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVM 363
           D+   +RY +TWP  I  + +G +D+  L+THRF    ++   AFE ++     AIKV 
Sbjct: 302 DLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQ 358

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  423 bits (1090), Expect = e-148
 Identities = 102/371 (27%), Positives = 167/371 (45%), Gaps = 22/371 (5%)

Query: 1   MAEAIRDDEGDKNQNM-----AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDV 55
              +   D G +N        A  L  +  + ++   +P  GP D+ V+++A GICG+D 
Sbjct: 5   HHHSSGVDLGTENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDR 64

Query: 56  HHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCS 115
           H              F    P+ +GHE  GI+ E GS V+ +  G R+  +P ISCG C 
Sbjct: 65  HLLH---------GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCP 115

Query: 116 LCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA 175
            C+AG  NLC  +R  G    +G  A  V+ P K  +++P  +    GA CEPL+  +H 
Sbjct: 116 QCQAGRVNLCRNLRAIGIHR-DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHG 174

Query: 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 235
              + +   + V I+G G IGL+T+  AR  GA  +I++     +  +A  +GA  T  V
Sbjct: 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATAT--V 232

Query: 236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 295
                DV   +      +  G+DV  +C G  +T+  +    + GG V ++G+      V
Sbjct: 233 DPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKV 292

Query: 296 ALTPAAA--REVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 353
            + P     RE+ V+G F          + + +G I++  +I+ R      E  D    +
Sbjct: 293 EIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISL--DEAPDVIS-N 349

Query: 354 AQGGNAIKVMF 364
                 +KV+ 
Sbjct: 350 PAAAGEVKVLV 360

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  420 bits (1083), Expect = e-148
 Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 18/352 (5%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
            A L   + L +    +P  GP ++ VR++A  ICG+D+H +K         A   ++ P
Sbjct: 4   LAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWK-----WDAWARGRIRPP 58

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 136
           +V GHE +G++E VG  V+  +VGD V+LE  I C  C  C+ G+Y++C   +  G    
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDR- 117

Query: 137 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 196
           +G  A  VV PA+  +  P ++  E  A+ EP    VH     +     +V+I G+GPIG
Sbjct: 118 DGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIG 177

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
           L+  +  RA GA  I+++D +  RL+ AR         +  D+ +V      ++   GSG
Sbjct: 178 LMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEV------VRRVTGSG 231

Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIF--RY 313
           ++V  +  G +  +   L A  PGG+  ++G+    +   L      R +   GI   R 
Sbjct: 232 VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRL 291

Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
             TW      + SG++D+ PL+THR         +AF +    G A+KV+ +
Sbjct: 292 WQTWMQGTALVYSGRVDLSPLLTHRLPL--SRYREAFGL-LASGQAVKVILD 340

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  413 bits (1063), Expect = e-145
 Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 26/358 (7%)

Query: 17  AAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK 75
           +        +++    +P +    +V+V+I + G+CGSD+              N     
Sbjct: 3   SVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIF---------KNGAHYY 53

Query: 76  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
           P+ +GHE +G I+ VGS V  L  GD VA  P + C  C  C  G Y+ C +  F GS  
Sbjct: 54  PITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR 113

Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPI 195
            +G  A  +V   K  + LP ++ +E+GA  EP++VG+HA   A      NV+I+G+G I
Sbjct: 114 -DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTI 172

Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
           GL+ +  A A GA  +   D+  ++L++A++ GA +T   S            +      
Sbjct: 173 GLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVL--RELR 228

Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA---REVDVIGIFR 312
              +  +  G  +T+  A+    P  ++ L+G    ++ +          +E+ VIG + 
Sbjct: 229 FNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWM 288

Query: 313 YRS------TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
             S       W      L   K+ ++PLI HR  F  +    A    A+     KV+ 
Sbjct: 289 NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLL 344

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  396 bits (1021), Expect = e-138
 Identities = 109/358 (30%), Positives = 182/358 (50%), Gaps = 18/358 (5%)

Query: 14  QNMAAWLLG--IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           + M A +        ++    +P  GP +V +++ A  ICG+D+H ++         A  
Sbjct: 3   EKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYE-----WNEWAQS 57

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
            +K P ++GHE AG + E+G  V+ +EVGD V++E  I CG C  C+ G Y++C   + F
Sbjct: 58  RIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF 117

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
           G    +G  A   V PA+  +K P ++  E   + EPL   V       +  ++ V+I G
Sbjct: 118 GVDT-DGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITG 175

Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
           +GP+GL+ +  A+A GA  +I+++    R  +A+ +GAD         EDV  +V  I  
Sbjct: 176 AGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDI-- 231

Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGI 310
             G+G+DV  +  G  K +   L A  P G+V L+GL   ++T+        + + + GI
Sbjct: 232 TDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGI 291

Query: 311 FRYR--STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
                  TW      L+SGK+++ P+ITH++     + E+AFE+  + G   KV+F L
Sbjct: 292 TGRHLWETWYTVSRLLQSGKLNLDPIITHKY-KGFDKYEEAFEL-MRAGKTGKVVFML 347

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  355 bits (912), Expect = e-122
 Identities = 69/369 (18%), Positives = 124/369 (33%), Gaps = 43/369 (11%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
            A   G     +     P     +  VR   +G+CG+D                   +  
Sbjct: 4   IAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIA-----GGHGGFPEGEDH 58

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPG--ISCGHCSLCKAGSYNLCPEMRFFGS- 133
           +V+GHE  G++ +       LE GD V        + G     +    ++ P+  +F   
Sbjct: 59  LVLGHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 134 -PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANV------GPETN 186
               +G ++     P K   ++P + + E G + EP+S+   A   A           ++
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSS 175

Query: 187 VMIMGSGPIGLVTLLAARAF--GAPRIII---TDVDVQRLSIARNLGADETAKVSTDIED 241
             ++G+G +GL+TL   +    G   +      D     + I   L A       T +ED
Sbjct: 176 AFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED 235

Query: 242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA 301
           V          +   +D  ++  GF K    ++ A  P G   L+G+           A 
Sbjct: 236 V--------PDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAF 287

Query: 302 -----AREVDVIGIFRYRS--TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
                     ++G             + F +  K  ++ L+T     +  E E AF+   
Sbjct: 288 HREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLS--EFEAAFD--- 342

Query: 355 QGGNAIKVM 363
                IK  
Sbjct: 343 DDDTTIKTA 351

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  346 bits (889), Expect = e-118
 Identities = 87/377 (23%), Positives = 160/377 (42%), Gaps = 32/377 (8%)

Query: 11  DKNQNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA 69
            K   + + +     ++++    P +  P ++ +++KA GICGSDVH  +  +   +   
Sbjct: 27  GKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYP 86

Query: 70  NFIVKKPMVIGHECAGIIEEVGSEV------KSLEVGDRVALEPGISCGHCSLCKAGSYN 123
                 P+ +GHE +G++ E G E       K  E+G+ V  E  + CGHC  C  G  N
Sbjct: 87  GL-TGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPN 145

Query: 124 LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD-------NVSLEEGAMCEPLSVGVHAC 176
            C  +   G    +G+ A  V   AK  + L +       +     G++ EP SV  +A 
Sbjct: 146 HCENLNELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAV 204

Query: 177 --RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK 234
             R   + P  NV+I+G GPIGL  +   +  GA ++I+++    R ++A+ LGAD    
Sbjct: 205 IVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVID 264

Query: 235 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK-----VCLIGLA 289
            +   E+    V       G G  +  +  G  + +   +       +     V ++  A
Sbjct: 265 PTK--ENFVEAVLDY--TNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARA 320

Query: 290 KTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIE 347
             ++ +       R   ++G   +    T+P  I  + SG +D+  +I+       +EI 
Sbjct: 321 DAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSM--EEIP 377

Query: 348 DAFEISAQGGNAIKVMF 364
           +  +      + +KV  
Sbjct: 378 EYIKRLQTDKSLVKVTM 394

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  291 bits (747), Expect = 7e-97
 Identities = 65/358 (18%), Positives = 114/358 (31%), Gaps = 51/358 (14%)

Query: 37  GPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
               +K+R    GICG+D         +  L          K  +V+GHE  G++EE   
Sbjct: 25  SYGKIKIRTIYNGICGADREIVNGKLTLSTLPK-------GKDFLVLGHEAIGVVEESYH 77

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--PPTNGSLAHKVVHPAKL 150
                  GD V       CG C  C  G  + C    F  +     +G +        K 
Sbjct: 78  GFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKY 134

Query: 151 CYKLPDNVSLEEGAMCEPLSVGVHACRRA--------------NVGPETNVMIMGSGPIG 196
             K+P ++  + G + +PL+    +                         V+++G+GPIG
Sbjct: 135 LVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIG 193

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
           ++  L  R +G    +    +   +              S++  D   D           
Sbjct: 194 VLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVG-------K 246

Query: 257 IDVSFDCVGFDKT-MSTALNATRPGGKVCLIGLAKTE----MTVALTPAAAREVDVIGIF 311
            DV  D  G D   +   +      G + L G + +         L         +IG+ 
Sbjct: 247 FDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLV 306

Query: 312 RY-RSTWPLCIEFLRSGKI----DVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVM 363
              +  +   +  L S K       K LIT        + ++  ++  +     IK+ 
Sbjct: 307 NGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSIN--DEKELLKVLREKEHGEIKIR 362

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  263 bits (675), Expect = 7e-86
 Identities = 90/361 (24%), Positives = 141/361 (39%), Gaps = 34/361 (9%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           + L  + + +  +    + V I + G+CGSDVH          R  +  V  P+++GHE 
Sbjct: 28  QPLVYKEFEISDIPRGSILVEILSAGVCGSDVH--------MFRGEDPRVPLPIILGHEG 79

Query: 84  AGIIEEVGSEVKS-----LEVGDRVALEPGISCGHCSLCKAG-SYNLCPEMRFFGSPPTN 137
           AG + EV  E +      L+ GD +    GI+CG C  CK      LCP  + +G     
Sbjct: 80  AGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGC 139

Query: 138 GSLAHK--------VVHPAKLCYKLPDNVSLEEGAMCEP-LSVGVHACRR-ANVGPETNV 187
               H         V+ P     K+ +   L+  AM     +   HA            V
Sbjct: 140 SEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTV 199

Query: 188 MIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDV 246
           +I G+GP+GL  ++ AR+ GA  +I+      RL +A  +GAD T     T +E+    +
Sbjct: 200 VIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAI 259

Query: 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR--- 303
             I    G G D   +  G  + +       R GG   + G+A  +  V           
Sbjct: 260 MDI--THGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLK 317

Query: 304 EVDVIGIF-RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 362
                GI+    S +   +         +  LITHR      E   A E+  +   A+KV
Sbjct: 318 NATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLK--EANKALEL-MESREALKV 374

Query: 363 M 363
           +
Sbjct: 375 I 375

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  229 bits (586), Expect = 7e-73
 Identities = 91/334 (27%), Positives = 154/334 (46%), Gaps = 18/334 (5%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K L +Q   +P      V ++++A G+C SDVH  + +  +     +  VK P+ +GHE 
Sbjct: 11  KPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI 70

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
           AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A  
Sbjct: 71  AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEY 129

Query: 144 VVHPAKLCYKLPDNVSLEEGAMCEPLS-VGV---HACRRANVGPETNVMIMG-SGPIGLV 198
           V+ P          ++  E A   PL+  G+    A R+A++ P   ++++G  G +G +
Sbjct: 130 VIVPHYKYMYKLRRLNAVEAA---PLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTM 186

Query: 199 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258
            +  A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I      G+D
Sbjct: 187 AVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITE--SKGVD 242

Query: 259 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTW 317
              D    +KT+S    A    GK  ++GL   ++          E+  +G     +S +
Sbjct: 243 AVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDF 302

Query: 318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
              +    +GK  VKP+IT       +E  +A +
Sbjct: 303 LGIMRLAEAGK--VKPMITKTMKL--EEANEAID 332

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  220 bits (563), Expect = 2e-69
 Identities = 86/350 (24%), Positives = 134/350 (38%), Gaps = 41/350 (11%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P  GP D  VR  A+  C SD+H    +     R         M++GHE  G + EVGSE
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIHTVF-EGAIGER-------HNMILGHEAVGEVVEVGSE 71

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN---GSLAHKV-VHPAK 149
           VK  + GDRV +         S  + G +     M   G   +N   G       V+ A 
Sbjct: 72  VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGM-LAGWKFSNVKDGVFGEFFHVNDAD 130

Query: 150 L-CYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 207
           +    LP  + LE   M  + ++ G H    AN+     V ++G GP+GL+++  A   G
Sbjct: 131 MNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLG 190

Query: 208 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD 267
           A RI           IA   GA +   ++    D+   + K  +  G G+D      G  
Sbjct: 191 AGRIFAVGSRKHCCDIALEYGATDI--INYKNGDIVEQILKATD--GKGVDKVVIAGGDV 246

Query: 268 KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR------------YRS 315
            T + A+   +PG  +  +        + +           G+               R 
Sbjct: 247 HTFAQAVKMIKPGSDIGNVNYLGEGDNIDI------PRSEWGVGMGHKHIHGGLCPGGRL 300

Query: 316 TWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAFEI-SAQGGNAIKVM 363
                I+ +   ++D   L+TH F GF    IE AF +   +  + IK +
Sbjct: 301 RMERLIDLVFYKRVDPSKLVTHVFRGFD--NIEKAFMLMKDKPKDLIKPV 348

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  210 bits (537), Expect = 1e-65
 Identities = 84/338 (24%), Positives = 133/338 (39%), Gaps = 28/338 (8%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
               +     PT GP ++ +++ A G+C SD+       +  M  A +    P+ +GHE 
Sbjct: 11  SEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIF------VMDMPAAQYAYGLPLTLGHEG 64

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP----TNGS 139
            G + E+G  V    VGD VA+     CG C  C  G  N C      G  P    + GS
Sbjct: 65  VGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGS 124

Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRR--ANVGPETNVMIMGSGPI 195
           +A  ++  +        ++     A      L+   HA  R    +GP +  +++G G +
Sbjct: 125 MAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPY-HAISRVLPLLGPGSTAVVIGVGGL 183

Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-G 254
           G V +   RA  A R+I  D+D  RL++AR +GAD   K              I+    G
Sbjct: 184 GHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGA------ADAIRELTGG 237

Query: 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRY 313
            G    FD VG   T+ TA       G + ++G+                  V+   +  
Sbjct: 238 QGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGT 297

Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
           RS     +   R+G++D   + T  F     E   A+ 
Sbjct: 298 RSELMEVVALARAGRLD---IHTETFTLD--EGPAAYR 330

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  197 bits (504), Expect = 2e-60
 Identities = 89/341 (26%), Positives = 136/341 (39%), Gaps = 35/341 (10%)

Query: 24  KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMV 78
           K L+I+    P L G  DV VRI   G+C +D+H     +               K P  
Sbjct: 26  KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWH---------ELLQPKLPYT 76

Query: 79  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 138
           +GHE  G IEEV   V+ LE GD V L P ++ G C  C+AG    C  + F G    +G
Sbjct: 77  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDG 135

Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-VGV---HACRRA--NVGPETNVMIMGS 192
             A  +    +   KLP ++S E+     PL+  G+    A ++A   + P   V I+G 
Sbjct: 136 GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV 195

Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
           G +G + +   +      +I  DV  ++L +A  LGAD       D       V ++   
Sbjct: 196 GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD------PVKQVMEL 249

Query: 253 M-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
             G G++V+ D VG   T+          G++ ++G    E+        + EV   G  
Sbjct: 250 TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSL 308

Query: 312 RY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
                     +     GK+    +          EI D  E
Sbjct: 309 VGNYVELHELVTLALQGKVR---VEVDIHKL--DEINDVLE 344

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  187 bits (478), Expect = 8e-57
 Identities = 75/343 (21%), Positives = 140/343 (40%), Gaps = 42/343 (12%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           + L I+  ++P    ++V +RI   G+C +D+       +     A    + P+++GHE 
Sbjct: 14  EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLR------VWKGVEAKQGFRLPIILGHEN 67

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
           AG I EVG E+  ++ GD V +        C  C+ G +N+C      G   TNG  +  
Sbjct: 68  AGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEY 125

Query: 144 VVHPAKLCYKLPDNVSLEEGAMCEPLSV-GV---HACRRA----NVGPETNVMIMGSGPI 195
           ++  +       +++S  E A   PL+  G     A R+A    +   E  V++ G G +
Sbjct: 126 MLVKSSRWLVKLNSLSPVEAA---PLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGL 182

Query: 196 GLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
            + T+   +A      I+      +    A  LGAD  +    +++D ++ + K+ +  G
Sbjct: 183 AVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVS----EMKDAESLINKLTD--G 236

Query: 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR 314
            G  ++ D VG ++T           G + L+G+    +++     A     ++G     
Sbjct: 237 LGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLG----- 291

Query: 315 STW------PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
           S +         +    SGKI        +      +I  AF 
Sbjct: 292 SNYGSLNDLEDVVRLSESGKIKP---YIIKVPLD--DINKAFT 329

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  183 bits (467), Expect = 6e-55
 Identities = 86/370 (23%), Positives = 143/370 (38%), Gaps = 62/370 (16%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
              ++Q   +      +V V++ A G+C +D+          +R   + V  P V+GHE 
Sbjct: 17  ADFELQALKIRQPQGDEVLVKVVATGMCHTDLI---------VRDQKYPVPLPAVLGHEG 67

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR-------------- 129
           +GIIE +G  V  L+VGD V L  G  CG C+ C  G+   C E                
Sbjct: 68  SGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHA 126

Query: 130 ------------FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH--- 174
                       FF       S A   +       K+  +V +E      PL  G+    
Sbjct: 127 LCTHDQGVVNDHFFAQ----SSFATYALSRENNTVKVTKDVPIELLG---PLGCGIQTGA 179

Query: 175 --ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 232
                   V P ++ +  G+G +GL  LLAA+  GA  II  D+   RL +A+ LGA   
Sbjct: 180 GACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV 239

Query: 233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 292
             +++  +D    V  I+     G++ + +  G  + +   ++A    GK+ ++G  +  
Sbjct: 240 --INSKTQDP---VAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG 294

Query: 293 MTVALTPAA--AREVDVIGIF----RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI 346
            T              ++G+       +   P  +   + GK     L+   + F   EI
Sbjct: 295 TTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF--DEI 351

Query: 347 EDAFEISAQG 356
             A   S +G
Sbjct: 352 NQAAIDSRKG 361

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  174 bits (444), Expect = 3e-51
 Identities = 74/374 (19%), Positives = 132/374 (35%), Gaps = 63/374 (16%)

Query: 38  PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 97
              V +++ +  ICGSD H ++ +         FIV K  V+GHE  G + E GS+V+ +
Sbjct: 32  EHAVILKVVSTNICGSDQHIYRGR---------FIVPKGHVLGHEITGEVVEKGSDVELM 82

Query: 98  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NGSLAHKV-VH 146
           ++GD V++   ++CG C  CK    ++C                     +G  A  V V 
Sbjct: 83  DIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVP 142

Query: 147 PAKL-CYKLPDNVSLEEG-----AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 200
            A     K  D     E       + + L  G H C  A V P ++V I G+GP+G    
Sbjct: 143 YADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAA 202

Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
             AR  GA  +I+ D + +RL +  + G         +   +   + +I       +D  
Sbjct: 203 AGARLLGAACVIVGDQNPERLKLLSDAGF--ETIDLRNSAPLRDQIDQILG--KPEVDCG 258

Query: 261 FDCVGFD--------------KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVD 306
            D VGF+                +++  +  R GG + + G+        +   A     
Sbjct: 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRL 318

Query: 307 VIGIFRY--------------RSTWPLCIEFLRSGKIDVKP--LITHRFGFTQKEIEDAF 350
            +   +                +      E +   ++      +          +  D +
Sbjct: 319 HLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLD--QAPDGY 376

Query: 351 EISAQGGNAIKVMF 364
               +G    K + 
Sbjct: 377 AKFDKGS-PAKFVI 389

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  173 bits (442), Expect = 6e-51
 Identities = 79/373 (21%), Positives = 140/373 (37%), Gaps = 62/373 (16%)

Query: 38  PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 97
              V +++ +  ICGSD H  + +            +  +V+GHE  G + E G +V++L
Sbjct: 33  EHGVILKVVSTNICGSDQHMVRGR---------TTAQVGLVLGHEITGEVIEKGRDVENL 83

Query: 98  EVGDRVALEPGISCGHCSLCKAGSYNLC------PEMRFFGSP---PTNGSLAHKVVHP- 147
           ++GD V++   ++CG C  CK     +C           +G        G  A  V+ P 
Sbjct: 84  QIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPY 143

Query: 148 AKL-CYKLPDNVSLEEG-----AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 201
           A     KLPD     E       + + L  G H    A VGP + V + G+GP+GL    
Sbjct: 144 ADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAA 203

Query: 202 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261
           +AR  GA  +I+ D++  RL+ A+  G +      +    +   +  +       +D + 
Sbjct: 204 SARLLGAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLG--EPEVDCAV 259

Query: 262 DCVGFD---------------KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVD 306
           D VGF+                 +++ +  TR  GK+ + GL  TE   A+  AA     
Sbjct: 260 DAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL 319

Query: 307 VIGIFRY--------------RSTWPLCIEFLRSGKIDVKPLI-THRFGFTQKEIEDAFE 351
            I                          ++ +   +I++  ++          +    + 
Sbjct: 320 SIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLD--DAPRGYG 377

Query: 352 ISAQGGNAIKVMF 364
               G    K + 
Sbjct: 378 EFDAGV-PKKFVI 389

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  170 bits (434), Expect = 6e-50
 Identities = 94/373 (25%), Positives = 155/373 (41%), Gaps = 53/373 (14%)

Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM 77
           AW  G   L I+   +      +V++++ A  +C +D++    KK +           P+
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF---------PV 63

Query: 78  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 137
           V+GHECAGI+E VG  V + + GD+V       C  C LC +   NLC ++R F  P  +
Sbjct: 64  VLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTID 123

Query: 138 GSLA-------------------------HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG 172
             L                          + VV  A L  ++ D  +LE       +  G
Sbjct: 124 QELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVC---LIGCG 179

Query: 173 VH-----ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 227
                  A   A V P +   + G G +GL  ++  +  GA RII  D++ ++   A+ L
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239

Query: 228 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLI 286
           GA +        + V      I      G+D S DC G  +T+  A++ T  G G   ++
Sbjct: 240 GATDCLNPRELDKPV---QDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296

Query: 287 GLAKTEMTVALTP-AAAREV--DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQ 343
           G    EMT+        R +     G ++   + P  +   ++ K D+  L+TH   F  
Sbjct: 297 GAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF-- 354

Query: 344 KEIEDAFEISAQG 356
           + I DA ++  +G
Sbjct: 355 ESINDAIDLMKEG 367

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  170 bits (432), Expect = 9e-50
 Identities = 89/354 (25%), Positives = 142/354 (40%), Gaps = 49/354 (13%)

Query: 37  GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
              +V+++I A  +C +D +        T+  A+     P+++GH  AGI+E VG  V  
Sbjct: 30  KAHEVRIKIIATAVCHTDAY--------TLSGADPEGCFPVILGHLGAGIVESVGEGVTK 81

Query: 97  LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGS--------LAH--- 142
           L+ GD V       CG C  C     NLC ++R     G  P   S        + H   
Sbjct: 82  LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMG 141

Query: 143 -------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIM 190
                   VV    +  K+     L++  +   L  G+      A   A + P +   + 
Sbjct: 142 TSTFSEYTVVADISVA-KIDPLAPLDKVCL---LGCGISTGYGAAVNTAKLEPGSVCAVF 197

Query: 191 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250
           G G +GL  ++  +  GA RII  D++  + + A+  GA E        + +      + 
Sbjct: 198 GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPI---QEVLI 254

Query: 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA---AAREVD 306
                G+D SF+C+G  K M  AL A   G G   ++G+A +   +A  P      R   
Sbjct: 255 EMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWK 314

Query: 307 --VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 358
               G ++   + P  +    S KI V   +TH   F   EI  AFE+   G +
Sbjct: 315 GTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF--DEINKAFELMHSGKS 366

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  165 bits (419), Expect = 7e-48
 Identities = 84/373 (22%), Positives = 147/373 (39%), Gaps = 51/373 (13%)

Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM 77
            W    K   I+   +      +V++++ A GIC SD H               +   P+
Sbjct: 14  LWEEK-KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS---------GTLVTPLPV 63

Query: 78  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP 134
           + GHE AGI+E +G  V ++  GD+V       CG C +CK    N C +       G+ 
Sbjct: 64  IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM 123

Query: 135 PTNGS--------LAH----------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-- 174
               S        + H           VV    +  K+     LE+  +   +  G    
Sbjct: 124 QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA-KIDAASPLEKVCL---IGCGFSTG 179

Query: 175 ---ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231
              A + A V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239

Query: 232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK 290
                   + +      +      G+D SF+ +G   TM TAL+  +   G   ++G+  
Sbjct: 240 CVNPQDYKKPI---QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296

Query: 291 TEMTVALTPAAAREVDVI-----GIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 345
               +++ P              G F+ + + P  +    + K  + PLITH   F  ++
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EK 354

Query: 346 IEDAFEISAQGGN 358
           I + F++   G +
Sbjct: 355 INEGFDLLRSGES 367

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  163 bits (414), Expect = 2e-47
 Identities = 93/346 (26%), Positives = 152/346 (43%), Gaps = 29/346 (8%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           M A ++    G + L++    +P  GP++V+VR+KA  +   DV             A+ 
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDV-------WVRKGVASP 53

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
            +  P V+G + +G+++ VG  V+    GD V + PG+SCG C  C AG  NLCP  +  
Sbjct: 54  KLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQIL 113

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV--HA-CRRANVGPETNVM 188
           G    +G+ A  VV P       P N+S EE A   PL+          +  V P  +V+
Sbjct: 114 GEHR-HGTYAEYVVLPEANLAPKPKNLSFEEAA-AIPLTFLTAWQMVVDKLGVRPGDDVL 171

Query: 189 IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247
           +M     + +  +  A+ FGA R+I T     +L  A+ LGADET   +    D   +V 
Sbjct: 172 VMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVR 228

Query: 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVD 306
           ++    G G D   D  G        + AT  GG++ + G  +  E T+       R++ 
Sbjct: 229 RLTG--GKGADKVVDHTGAL-YFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLS 285

Query: 307 VIGIF-RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
           ++G     +S     + F+  GK+  KP++            +   
Sbjct: 286 ILGSTMASKSRLFPILRFVEEGKL--KPVVGQVLPLE--AAAEGHR 327

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  162 bits (413), Expect = 6e-47
 Identities = 84/370 (22%), Positives = 142/370 (38%), Gaps = 51/370 (13%)

Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM 77
           AW    K L ++   +      +V+++I A GICGSD        L  +  + F    P+
Sbjct: 15  AWEPH-KPLSLETITVAPPKAHEVRIKILASGICGSDSSV-----LKEIIPSKF----PV 64

Query: 78  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP 134
           ++GHE  G++E +G+ V  ++ GD+V       CG C  CK+ + N C +       G  
Sbjct: 65  ILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM 124

Query: 135 PTNGS--------LAH---------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC- 176
               S        + +           V       K+     LE   +    + G  A  
Sbjct: 125 ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAV 184

Query: 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 236
             A V P +   + G G +G   ++  +A GA RII       +   A  LGA E     
Sbjct: 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK 244

Query: 237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
              + +      I      G+D + +C G  +TM  AL +T  G G   ++GLA     +
Sbjct: 245 DYDKPI---YEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERL 301

Query: 296 ALTPAAAREVDVIGIFRYRSTW---------PLCIEFLRSGKIDVKPLITHRFGFTQKEI 346
            L P     + ++     + +             ++     KI+V  L++ +      +I
Sbjct: 302 PLDP-----LLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL--DQI 354

Query: 347 EDAFEISAQG 356
             AFE+ + G
Sbjct: 355 NKAFELLSSG 364

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  161 bits (410), Expect = 2e-46
 Identities = 87/371 (23%), Positives = 144/371 (38%), Gaps = 51/371 (13%)

Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM 77
           AW    K L I+   +      +++++I A G+C +D++H    K        F    P+
Sbjct: 14  AWEAN-KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG----F----PV 64

Query: 78  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP 134
           V+GHE AGI+E VG  V   + G++V       CG C  C++   N C +          
Sbjct: 65  VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124

Query: 135 PTNGS--------LAH----------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-- 174
               +        +             VV+   +  K+  +  L+   +   L  GV   
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVA-KIDPSAPLDTVCL---LGCGVSTG 180

Query: 175 ---ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231
              A   A V P +   + G G +GL  ++   + GA RII  D++  +   A+  GA +
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240

Query: 232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK 290
               +   E +      +      G+D S +CVG    M  AL +   G G   L+G   
Sbjct: 241 FVNPNDHSEPI---SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD 297

Query: 291 TEMTVALTPA---AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 345
               VA  P    A R     + G F+ +   P  ++     K+ +   ITHR     + 
Sbjct: 298 LH-DVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ES 354

Query: 346 IEDAFEISAQG 356
           + DA ++   G
Sbjct: 355 VNDAIDLMKHG 365

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  157 bits (399), Expect = 5e-45
 Identities = 80/347 (23%), Positives = 127/347 (36%), Gaps = 32/347 (9%)

Query: 14  QNMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCAN 70
           + M  W         LK+    +P  G  D+ VR  A+ +   D        L       
Sbjct: 26  KWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDK-------LVLETGMG 78

Query: 71  FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF 130
             +  P V   + +G++E VG  V     GDRV                G     P    
Sbjct: 79  LDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTG---RTPAYET 135

Query: 131 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV---HA-CRRANVGPETN 186
            G     G L+  VV P       P ++   E +   P   G+    A   + ++     
Sbjct: 136 LGG-AHPGVLSEYVVLPEGWFVAAPKSLDAAEAS-TLPC-AGLTAWFALVEKGHLRAGDR 192

Query: 187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 246
           V++ G+G + L  L  A+A GA  +I+T    ++L  A  LGAD         ED    V
Sbjct: 193 VVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLE--EDWVERV 249

Query: 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREV 305
             +      G D   +  G    +  +L A  P G++ +IG L   E++  + P   +  
Sbjct: 250 YALTG--DRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSP 306

Query: 306 DVIGIF-RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
            V GI   +R      +  +    +  KP+I  R+ FT  E+ +A  
Sbjct: 307 VVQGISVGHRRALEDLVGAVDRLGL--KPVIDMRYKFT--EVPEALA 349

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  154 bits (392), Expect = 3e-44
 Identities = 85/300 (28%), Positives = 124/300 (41%), Gaps = 41/300 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVI 79
             L I    +P  GP  V+V+I+A G+C +D+H     + VK              P + 
Sbjct: 13  APLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK-----------PTLPFIP 61

Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSP 134
           GHE  G +  VGS V  ++ GDRV    G+     +CG+C  C  G   LC + +  G  
Sbjct: 62  GHEGVGYVSAVGSGVSRVKEGDRV----GVPWLYSACGYCEHCLQGWETLCEKQQNTGY- 116

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGV---HACRRANVGPETNVMI 189
             NG     VV        LPD V   E A  +C     GV      +  +  P   V+I
Sbjct: 117 SVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILC----AGVTVYKGLKVTDTRPGQWVVI 172

Query: 190 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249
            G G +G V +  ARA G  R+   D+D  +L++AR LGA+    V+    D       +
Sbjct: 173 SGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVA--VNARDTDP---AAWL 226

Query: 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 309
           Q  +G G           K  S A+   R GG + L GL   +    +     + + + G
Sbjct: 227 QKEIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  157 bits (398), Expect = 3e-44
 Identities = 70/367 (19%), Positives = 119/367 (32%), Gaps = 39/367 (10%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK------ 75
             K+L++    +P L P +V V + A  I  + V     + + T        ++      
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 76  ----PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
                 V+G +C+G++   G  V+  + GD V + P            G   L  E R +
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEPATHGDGMLGTEQRAW 164

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-----VHACRRANVGPETN 186
           G     G LA   V  A      P +++ EE A   PL  G     + + R A +     
Sbjct: 165 GFETNFGGLAEYGVVRASQLLPKPAHLTWEEAA-VSPLCAGTAYRMLVSDRGAQMKQGDI 223

Query: 187 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET------------- 232
           V+I G SG +G   +   +  G    +      Q+ +  R LG D               
Sbjct: 224 VLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIA 282

Query: 233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKT 291
                 +E        +    G   D+ F+  G   T   ++   R GG V   G  +  
Sbjct: 283 DDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVTCGSSSGY 341

Query: 292 EMTVALTPAAAREVDVIGIFR-YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
             T        +   ++G                 SG +   P ++  +     E  +A 
Sbjct: 342 LHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAV--VPAMSAVYPL--AEAAEAC 397

Query: 351 EISAQGG 357
            +     
Sbjct: 398 RVVQTSR 404

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  153 bits (388), Expect = 1e-43
 Identities = 93/300 (31%), Positives = 133/300 (44%), Gaps = 41/300 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVI 79
           + LKI+    PT+   +V VRIKA G+C +D+H     + VK            K P++ 
Sbjct: 11  EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVK-----------PKLPLIP 59

Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSP 134
           GHE  GI+EEVG  V  L+VGDRV    GI     +CGHC  C +G   LC   +  G  
Sbjct: 60  GHEGVGIVEEVGPGVTHLKVGDRV----GIPWLYSACGHCDYCLSGQETLCEHQKNAGY- 114

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGV---HACRRANVGPETNVMI 189
             +G  A      A    K+PDN+S EE A   C     GV    A +     P   V I
Sbjct: 115 SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFC----AGVTTYKALKVTGAKPGEWVAI 170

Query: 190 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249
            G G +G V +  A+A G   ++  D+  ++L +A+ LGAD        +  +  D  K 
Sbjct: 171 YGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKF 223

Query: 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 309
                 G+  +           +A N+ R GG   L+GL   EM + +       + +IG
Sbjct: 224 MKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG 283

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  151 bits (384), Expect = 4e-42
 Identities = 79/376 (21%), Positives = 124/376 (32%), Gaps = 44/376 (11%)

Query: 12  KNQNMAAWLL-----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM 66
               M A L        K++ +    +P LGP +  V + A  +  + VH    + LST 
Sbjct: 39  DETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTF 98

Query: 67  RCANFIVKKPM----------VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSL 116
                  +             VIG + AG++   G  V + + GD V           S 
Sbjct: 99  GFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSD 158

Query: 117 CKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG---- 172
                  L PE R +G     G LA   +  +      PD++S EE A    L       
Sbjct: 159 G-HNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAA-APGLVNSTAYR 216

Query: 173 -VHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230
            + +   A +    NV+I G SG +G      A A GA   I      Q+  I R +GA+
Sbjct: 217 QLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAE 275

Query: 231 ET-----------AKVSTDIEDVDTDVGKIQNAM--GSGIDVSFDCVGFDKTMSTALNAT 277
                           +T         GK    +  G  ID+ F+  G  +T   ++  T
Sbjct: 276 AIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVT 334

Query: 278 RPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGI-FRYRSTWPLCIEFLRSGKIDVKPLI 335
           R GG +      +                 +IG  F            +  G+I   P +
Sbjct: 335 RKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRI--HPTL 392

Query: 336 THRFGFTQKEIEDAFE 351
           +  +    ++   A  
Sbjct: 393 SKVYSL--EDTGQAAY 406

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  147 bits (373), Expect = 2e-41
 Identities = 65/283 (22%), Positives = 111/283 (39%), Gaps = 46/283 (16%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVI 79
             L+ +   +P     ++ + +K  G+C +D+H     + +            VK P+V 
Sbjct: 16  GKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLP-----------VKLPLVG 64

Query: 80  GHECAGIIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSP 134
           GHE AG++  +G  VK  ++GD      GI     SC  C  C+ G+ + CP     G  
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYA----GIKWLNGSCMACEYCELGNESNCPHADLSGY- 119

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGV---HACRRANVGPETNVMI 189
             +GS        A     +P    L + A  +C     G+    A + AN+     V I
Sbjct: 120 THDGSFQQYATADAVQAAHIPQGTDLAQVAPILC----AGITVYKALKSANLMAGHWVAI 175

Query: 190 MGSGPIGL----VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245
            G+   GL    V    A+A G  R++  D    +  + R++G +      T  +D+   
Sbjct: 176 SGAAG-GLGSLAVQY--AKAMGY-RVLGIDGGEGKEELFRSIGGEVFI-DFTKEKDI--- 227

Query: 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
           VG +  A   G     +    +  +  +    R  G   L+G+
Sbjct: 228 VGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM 270

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  128 bits (325), Expect = 3e-34
 Identities = 71/300 (23%), Positives = 117/300 (39%), Gaps = 50/300 (16%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
             K  K   Y        D+ ++I+A G+CGSD+H                +K P+V+GH
Sbjct: 17  DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH--------CAAGHWGNMKMPLVVGH 68

Query: 82  ECAGIIEEVGSEVKS-LEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRF-FGSP 134
           E  G + ++G +  S L+VG RV    G+     SC  C  CK  +   C +    +  P
Sbjct: 69  EIVGKVVKLGPKSNSGLKVGQRV----GVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQP 124

Query: 135 PTNGSL-----AHKVVHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANV 181
             +G +     A+ V         +P+N+     A  +C       PL        R   
Sbjct: 125 YEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL-------VRNGC 177

Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
           GP   V I+G G IG +  L ++A GA   +I+    +R   A  +GAD     + +  D
Sbjct: 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGADHYI-ATLEEGD 235

Query: 242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA--LNATRPGGKVCLIGLAKTEMTVALTP 299
                   +    +  D+   C      +       A + GG++  I + +    ++L P
Sbjct: 236 ------WGEKYFDT-FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKP 288

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  127 bits (322), Expect = 6e-34
 Identities = 59/363 (16%), Positives = 133/363 (36%), Gaps = 65/363 (17%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM--VIGH 81
           K ++++   L  +   DV+V++ A  I  SD++         M   N+ +   +  V G+
Sbjct: 40  KVVELKNLELAAVRGSDVRVKMLAAPINPSDIN---------MIQGNYGLLPELPAVGGN 90

Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E    +  VGS V  L+ GD V                             +    G+  
Sbjct: 91  EGVAQVVAVGSNVTGLKPGDWVI---------------------------PANAGLGTWR 123

Query: 142 HKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLV 198
            + V   +   ++P ++ L+  A     P +          + P  +V+    +  +G  
Sbjct: 124 TEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQA 183

Query: 199 TLLAARAFGAPRIII--TDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
            +  A A G   I +     D+Q+LS   ++LGA+    ++ +           ++    
Sbjct: 184 VIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV--ITEEELRRPEMKNFFKD--MP 239

Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIF--- 311
              ++ +CVG  K+ +  L     GG +   G +AK  +  +++    +++ + G +   
Sbjct: 240 QPRLALNCVG-GKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQ 298

Query: 312 --------RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
                   +++       + +R G++        +     ++ + A E S +   + K +
Sbjct: 299 WKKDHSPDQFKELILTLCDLIRRGQL--TAPACSQVPL--QDYQSALEASMKPFISSKQI 354

Query: 364 FNL 366
             +
Sbjct: 355 LTM 357

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  127 bits (322), Expect = 7e-34
 Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 48/273 (17%)

Query: 36  LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
            G +DV+ ++   G+C SD+H        +++        P+V GHE  G + EVGS+VK
Sbjct: 39  TGEEDVRFKVLYCGVCHSDLH--------SIKNDWGFSMYPLVPGHEIVGEVTEVGSKVK 90

Query: 96  SLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRF-FGSPPTNGSLAH-----KV 144
            + VGD+V    G+     +C  C  C     N CP+M   + S   +G++ +      +
Sbjct: 91  KVNVGDKV----GVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHM 146

Query: 145 VHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVG-PETNVMIMGSGPI 195
           V   +   + PDN+ L+ GA  +C       PL       +   +  P  ++ I+G G +
Sbjct: 147 VANERYIIRFPDNMPLDGGAPLLCAGITVYSPL-------KYFGLDEPGKHIGIVGLGGL 199

Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
           G V +  A+AFG+   +I+    ++    +N GAD           V  D  ++Q A G+
Sbjct: 200 GHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL--------VSRDQEQMQAAAGT 251

Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
            +D   D V     +       +  GK+ L+G 
Sbjct: 252 -LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGA 283

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  126 bits (319), Expect = 1e-33
 Identities = 68/297 (22%), Positives = 107/297 (36%), Gaps = 55/297 (18%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
            K   +    +GP+DV + I   GIC SD+H        +          PM+ GHE AG
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH--------SAYSEWKEGIYPMIPGHEIAG 68

Query: 86  IIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEM--------RFFG 132
           II+EVG  VK  ++GD V    G+     SC  C  CK      C ++         F  
Sbjct: 69  IIKEVGKGVKKFKIGDVV----GVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHD 124

Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVGPE 184
           + P  G  ++ +V        +  N  LE+ A  +C       PL       + + V   
Sbjct: 125 NEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL-------KFSKVTKG 177

Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 244
           T V + G G +G + +  A A GA   +    + ++   A ++G              D 
Sbjct: 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKK-QDALSMGVKHFY--------TDP 228

Query: 245 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA 301
                       +D     +     +   L      G + L+GL   E+   L+   
Sbjct: 229 K------QCKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFD 279

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  125 bits (317), Expect = 3e-33
 Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 48/278 (17%)

Query: 31  YHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90
           Y L   GP+DV +RI   GIC +D+H          +    +   PMV GHE  G + EV
Sbjct: 27  YTLRETGPEDVNIRIICCGICHTDLH--------QTKNDLGMSNYPMVPGHEVVGEVVEV 78

Query: 91  GSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRF-FGSPPTNGSLAH-- 142
           GS+V    VGD V    G+      CG CS C+      CP+  + +     NG      
Sbjct: 79  GSDVSKFTVGDIV----GVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGG 134

Query: 143 ---KVVHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVG-PETNVMIM 190
                V   K   K+P+ +++E+ A  +C       PL           +  P     I+
Sbjct: 135 FAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL-------SHFGLKQPGLRGGIL 187

Query: 191 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250
           G G +G + +  A+A G    +I+  + +R    ++LGAD+          + +D  K+ 
Sbjct: 188 GLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV--------IGSDQAKMS 239

Query: 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
               S +D   D V     +   L+  +  GK+ L+G+
Sbjct: 240 ELADS-LDYVIDTVPVHHALEPYLSLLKLDGKLILMGV 276

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  123 bits (312), Expect = 2e-32
 Identities = 67/284 (23%), Positives = 103/284 (36%), Gaps = 50/284 (17%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
           L+         GP DVK+ I   G+C SD+H         +R        P V GHE  G
Sbjct: 35  LEPMDITRREPGPNDVKIEIAYCGVCHSDLH--------QVRSEWAGTVYPCVPGHEIVG 86

Query: 86  IIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRF-------FGS 133
            +  VG +V+    GD V    G+     SC HC  C+ G  N C  M            
Sbjct: 87  RVVAVGDQVEKYAPGDLV----GVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP 142

Query: 134 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA---MC------EPLSVGVHACRRANVGPE 184
             T G  + ++V   +   ++             +C       PL       R    GP 
Sbjct: 143 GHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL-------RHWQAGPG 195

Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 244
             V ++G G +G + +  A A GA  +  T  + +R   A+ LGADE    S + ++   
Sbjct: 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVV-NSRNADE--- 250

Query: 245 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
               +   + S  D   + V     +       +  G + L+G 
Sbjct: 251 ----MAAHLKS-FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA 289

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  115 bits (291), Expect = 9e-30
 Identities = 60/354 (16%), Positives = 121/354 (34%), Gaps = 57/354 (16%)

Query: 14  QNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA 69
           + M A         K LK+     P      + +++ A  +   D    K +  S     
Sbjct: 5   KEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDY---KTRNGSGFVAK 61

Query: 70  NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR 129
                 P  +G++ +G + E+GS+V ++ +GD+V        G                 
Sbjct: 62  KLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKV-------MG----------------- 97

Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV---HACRRANVGPETN 186
             G P      A  V        +  + +S  + A   P   G+    A  +A V     
Sbjct: 98  IAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAA-SLPT-AGLTALQALNQAEVKQGDV 155

Query: 187 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245
           V+I   +G +G + +  A+  G   +I T    +  +  + LGA++          ++  
Sbjct: 156 VLIHAGAGGVGHLAIQLAKQKGT-TVITT-ASKRNHAFLKALGAEQC---------INYH 204

Query: 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREV 305
                 A+ + +D   D VG D     +++  +  G +  +        + +  A  +  
Sbjct: 205 EEDFLLAISTPVDAVIDLVGGD-VGIQSIDCLKETGCIVSVPTITAGRVIEV--AKQKHR 261

Query: 306 DVIGIFRYRSTWPL--CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 357
              G+ +  +   L    + +   K+  +  I+  F  +  E   A E+   G 
Sbjct: 262 RAFGLLKQFNIEELHYLGKLVSEDKL--RIEISRIFQLS--EAVTAHELLETGH 311

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  114 bits (289), Expect = 3e-29
 Identities = 72/349 (20%), Positives = 127/349 (36%), Gaps = 70/349 (20%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGHECAGIIEEV 90
           +P      V +++ A G+   + +          R   +  K   P   G + AG+IE V
Sbjct: 52  VPIPKDHQVLIKVHACGVNPVETYI---------RSGTYSRKPLLPYTPGSDVAGVIEAV 102

Query: 91  GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
           G    + + GDRV           S   +G Y                  A   +     
Sbjct: 103 GDNASAFKKGDRVF---------TSSTISGGY------------------AEYALAADHT 135

Query: 151 CYKLPDNVSLEEGAMCEPLSVG-VHAC--RRANVGPETNVMIMG-SGPIGLVTLLAARAF 206
            YKLP+ +  ++GA    +     +      A V    +V++ G SG +GL     ARA+
Sbjct: 136 VYKLPEKLDFKQGA-AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY 194

Query: 207 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 266
           G  +I+ T    +   I    GA E         +    + K       GID+  + +  
Sbjct: 195 GL-KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVG--EKGIDIIIEMLAN 249

Query: 267 DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST---------- 316
              +S  L+    GG+V ++G   T + +      A+E  +IG+  + ST          
Sbjct: 250 V-NLSKDLSLLSHGGRVIVVGSRGT-IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAA 307

Query: 317 -WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAI-KVM 363
                   +  G +  KP+I  ++    +++ +A E    G  A  K++
Sbjct: 308 LQAG----MEIGWL--KPVIGSQYPL--EKVAEAHENIIHGSGATGKMI 348

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  115 bits (289), Expect = 3e-29
 Identities = 52/378 (13%), Positives = 108/378 (28%), Gaps = 73/378 (19%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVIG 80
             +        L P +V V+     +  SD++     +  K            +     G
Sbjct: 20  FTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP--AKTTGFGTTEPAAPCG 77

Query: 81  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 140
           +E    + +VGS V SLE GD V                             S    G+ 
Sbjct: 78  NEGLFEVIKVGSNVSSLEAGDWVI---------------------------PSHVNFGTW 110

Query: 141 AHKVVHPAKLCYKL-----------PDNVSLEEGAMCEPLSVGV----HAC-RRANVGPE 184
               +       KL           P+ +++ +GA    +SV              + P 
Sbjct: 111 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGAT---ISVNPLTAYLMLTHYVKLTPG 167

Query: 185 TNVMIM--GSGPIGLVTLLAARAFGAPRIIIT---DVDVQRLSIARNLGADETAKVST-D 238
            +  I   G+  +G       +      I +        + ++  + LGA +       +
Sbjct: 168 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNN 227

Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVAL 297
             +    + +     G    ++ +CVG  K+ +         G +   G ++   +T+  
Sbjct: 228 SREFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPT 286

Query: 298 TPAAAREVDVIGIF----------RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQ-KEI 346
           +    +     G +             ST    I +   GK+      +    +   K +
Sbjct: 287 SLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKL--TDAKSIETLYDGTKPL 344

Query: 347 EDAFEISAQGGNAIKVMF 364
            + ++         K + 
Sbjct: 345 HELYQDGVANSKDGKQLI 362

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  113 bits (286), Expect = 7e-29
 Identities = 72/396 (18%), Positives = 134/396 (33%), Gaps = 102/396 (25%)

Query: 13  NQNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC 68
           +  M A +L    G+  L++    +P     ++K+R+KA G+   D+          M  
Sbjct: 1   SMEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDL----------MVR 50

Query: 69  ANFIVKKP---MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 125
              I   P   +V G EC+GI+E +G  VK  E+GDRV           +     ++   
Sbjct: 51  QGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV----------MAFVNYNAW--- 97

Query: 126 PEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-VHAC--RRANVG 182
                          A  V  P +  YK+PD++S  E A   P++    +      AN+ 
Sbjct: 98  ---------------AEVVCTPVEFVYKIPDDMSFSEAA-AFPMNFVTAYVMLFEVANLR 141

Query: 183 PETNVMI-MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
              +V++    G +G               +       +    ++            + D
Sbjct: 142 EGMSVLVHSAGGGVGQAVAQLCSTVPN-VTVFGTASTFKHEAIKDSVT--------HLFD 192

Query: 242 VDTD-VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-------KTEM 293
            + D V +++     G+D+  DC+         L+  +P G   L G +       K+  
Sbjct: 193 RNADYVQEVKRISAEGVDIVLDCLC-GDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFF 251

Query: 294 TVALTPAAAREVD----------VIGIF--RYRST--------------WPLCIEFLRSG 327
           + A +     +V+          + G                         L        
Sbjct: 252 SFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGL----YNQK 307

Query: 328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
           KI  KP++   +     E+++A +     GN  K++
Sbjct: 308 KI--KPVVDSLWALE--EVKEAMQRIHDRGNIGKLI 339

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  112 bits (283), Expect = 1e-28
 Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 52/275 (18%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH----FKVKKLSTMRCANFIVKKPM 77
           G + L+   +        +++V  KA+GI   D +     +    L            P 
Sbjct: 12  GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSL------------PS 59

Query: 78  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 137
            +G E AGI+ +VGS VK ++ GDRV                          +  S    
Sbjct: 60  GLGTEAAGIVSKVGSGVKHIKAGDRVV-------------------------YAQSAL-- 92

Query: 138 GSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGP 194
           G+ +      A     LP  +S E+ A    + L+V     +   + P+   +    +G 
Sbjct: 93  GAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGG 152

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
           +GL+    A+A GA ++I T    Q+   A   GA +   ++   ED+   + +I    G
Sbjct: 153 VGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQV--INYREEDLVERLKEITG--G 207

Query: 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289
             + V +D VG D T   +L+  +  G +   G +
Sbjct: 208 KKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNS 241

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  111 bits (280), Expect = 5e-28
 Identities = 56/333 (16%), Positives = 101/333 (30%), Gaps = 69/333 (20%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGHECAGIIEEV 90
           +P  GP  V +++    I  SDV               +   +      G E  G I   
Sbjct: 44  VPAPGPSQVLIKVNLASINPSDVA---------FIKGQYGQPRVKGRPAGFEGVGTIVAG 94

Query: 91  GSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK 149
           G E  +   VG RVA   G+S         GS+                  A   V  A 
Sbjct: 95  GDEPYAKSLVGKRVAFATGLSNW-------GSW------------------AEYAVAEAA 129

Query: 150 LCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAF 206
            C  L D V  E+GA  +  PL+  +          E   ++   +  +  + +  A+  
Sbjct: 130 ACIPLLDTVRDEDGAAMIVNPLTA-IAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEE 188

Query: 207 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 266
           G  R I+T    +++++ +++GA     ++    D +  + ++         +  D V  
Sbjct: 189 GF-RPIVTVRRDEQIALLKDIGAAHV--LNEKAPDFEATLREVMK--AEQPRIFLDAVT- 242

Query: 267 DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA--AREVDVIGIF-RYRST------- 316
               S   NA     +  + G    + TV   P     +   + G +             
Sbjct: 243 GPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRG 302

Query: 317 ------WPLCIEFLRSGKIDVKPLITHRFGFTQ 343
                           G+      +T      +
Sbjct: 303 PAILEAQKR----FSDGRW--STDVTAVVPLAE 329

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  110 bits (277), Expect = 8e-28
 Identities = 77/275 (28%), Positives = 117/275 (42%), Gaps = 52/275 (18%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH----FKVKKLSTMRCANFIVKKPM 77
           G + L+   +     GPQ V VR KA+G+   D ++    +    L            P 
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL------------PS 59

Query: 78  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 137
            +G E AG++E VG EV   +VGDRVA                         +   P   
Sbjct: 60  GLGAEGAGVVEAVGDEVTRFKVGDRVA-------------------------YGTGPL-- 92

Query: 138 GSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGP 194
           G+ +   V P     KL D+VS E+ A  M + L+V     +   V P   ++    +G 
Sbjct: 93  GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGG 152

Query: 195 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254
           +G +    A+A GA ++I T    ++ + A+ LGA ET  +    EDV   V ++ +  G
Sbjct: 153 VGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWET--IDYSHEDVAKRVLELTD--G 207

Query: 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289
               V +D VG D T  T+L++  P G V   G A
Sbjct: 208 KKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNA 241

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  110 bits (277), Expect = 9e-28
 Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 43/273 (15%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
           G      +   + + GP  V++R  A+G+   D +H      + +     + + P+V+G 
Sbjct: 12  GPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHR-----AGIPHPLVVGEPPIVVGF 66

Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E A ++EEVG  V    VG+RV                              P   G+ +
Sbjct: 67  EAAAVVEEVGPGVTDFTVGERVC-------------------------TCLPPL--GAYS 99

Query: 142 HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC----RRANVGPETNVMIM-GSGPIG 196
            + ++PA+   K+P ++ L++  +   +  G+ A     +   V P   V+I   +G +G
Sbjct: 100 QERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMG 159

Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256
            + +  AR  GA  +I T    ++   AR LG   T  ++   +D    V +I    G G
Sbjct: 160 HIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHT--INYSTQDFAEVVREITG--GKG 214

Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289
           +DV +D +G D T+  +L+  RP G     G A
Sbjct: 215 VDVVYDSIGKD-TLQKSLDCLRPRGMCAAYGHA 246

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  109 bits (275), Expect = 2e-27
 Identities = 58/348 (16%), Positives = 111/348 (31%), Gaps = 74/348 (21%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM--VIGHEC 83
           L+++  ++  L   +V VR+    I  SD+               +  + P+  + G+E 
Sbjct: 20  LQVEYKNIEPLKDNEVFVRMLVRPINPSDLI---------PITGAYAHRIPLPNIPGYEG 70

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
            GI+E VG+ V    +G RV            L   G++                     
Sbjct: 71  VGIVENVGAFVSRELIGKRV----------LPLRGEGTW------------------QEY 102

Query: 144 VVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTL 200
           V   A     +PD++     A     PL+  V      N+     +++      IG +  
Sbjct: 103 VKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFA 162

Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
             ++     R+I    + +       LGA     + T    +   V ++ N  G G D +
Sbjct: 163 QLSQILNF-RLIAVTRNNKHTEELLRLGAAYV--IDTSTAPLYETVMELTN--GIGADAA 217

Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST---- 316
            D +G     +    + RP G    IGL      V       +      IF  R      
Sbjct: 218 IDSIGGP-DGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEV 275

Query: 317 ------------WPLCIEFLRSGKIDVKPL-ITHRFGFTQKEIEDAFE 351
                         L    + + ++  + + +   +     +++ A +
Sbjct: 276 SPYKWQETFRHLIRL----VENEQL--RFMKVHSTYEL--ADVKAAVD 315

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  109 bits (273), Expect = 5e-27
 Identities = 62/386 (16%), Positives = 113/386 (29%), Gaps = 89/386 (23%)

Query: 14  QNMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
               A  +    +         P L    V VR++A+ I  SD                 
Sbjct: 10  PQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSM-----------RGQ 58

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
                  +G + AG +  VGS+V  ++VGDRV        G  +     +          
Sbjct: 59  FATPWAFLGTDYAGTVVAVGSDVTHIQVGDRV-------YGAQNEMCPRT---------- 101

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV---------------GVHAC 176
              P  G+ +   V   ++  K+P  +S E+ A   P  +                  A 
Sbjct: 102 ---PDQGAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGISTAGLAMKLLGLPLPSPSAD 157

Query: 177 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 235
           +         V++ G S     VT+   R  G    I T        +A++ GA+E    
Sbjct: 158 QPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKSRGAEEV--- 212

Query: 236 STDIEDVD----TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT-RPGGKVCLI---- 286
                  D         I+    + +  + DC+   ++ +    A  R GG    +    
Sbjct: 213 ------FDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFP 266

Query: 287 ------GLAKTEMTVALTPAAAREVDVIGIFRYRST----------WPLCIEFLRSGKID 330
                  +  T+ T+  T            +    +          W +  + +  G++ 
Sbjct: 267 EHAATRKMVTTDWTLGPT-IFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRL- 324

Query: 331 VKPLITHRFGFTQKEIEDAFEISAQG 356
                          I+   E+  +G
Sbjct: 325 -VHHPLRVVQGGFDHIKQGMELVRKG 349

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  107 bits (270), Expect = 8e-27
 Identities = 67/346 (19%), Positives = 127/346 (36%), Gaps = 63/346 (18%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
           G   +K + Y +P++  +++ ++ K  G+   + +          R   +  +KP V+G 
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF---------RKGIYPCEKPYVLGR 69

Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
           E +G +   G  V + EVGD+VA                ++                   
Sbjct: 70  EASGTVVAKGKGVTNFEVGDQVA-----------YISNSTFA-----------------Q 101

Query: 142 HKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACRRANVGPETNVMIMG-SGPI 195
           +  +       KLP   S EE       + + L+         +V     V++   +G +
Sbjct: 102 YSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGV 161

Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
           GL+     +  GA   I      ++L IA+  GA+    ++   ED+   V K  N  G 
Sbjct: 162 GLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYL--INASKEDILRQVLKFTN--GK 216

Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIG--IFR 312
           G+D SFD VG D T   +L A +  G     G A   +   ++T  + + + ++   ++ 
Sbjct: 217 GVDASFDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYG 275

Query: 313 YRSTWPLC-------IEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
           Y +               + S K+     I   +    ++   A  
Sbjct: 276 YIADPEEWKYYSDEFFGLVNSKKL--NIKIYKTYPL--RDYRTAAA 317

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  107 bits (270), Expect = 9e-27
 Identities = 71/372 (19%), Positives = 124/372 (33%), Gaps = 76/372 (20%)

Query: 15  NMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCAN 70
           +M A       G + L       P  GP  V V +KA G+C  D           +    
Sbjct: 21  SMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY----------LMTKG 70

Query: 71  FIVKK---PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
               K   P V G E AG++     E   ++ GDRV           +    G Y     
Sbjct: 71  EYQLKMEPPFVPGIETAGVVRSAP-EGSGIKPGDRV----------MAFNFIGGY----- 114

Query: 128 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-VHAC--RRANVGP- 183
                        A +V          P  +   E       +   ++    RR  +   
Sbjct: 115 -------------AERVAVAPSNILPTPPQLDDAEAV-ALIANYHTMYFAYARRGQLRAG 160

Query: 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 242
           ET V+++G +G IG   +  A+  GA ++I            +++GAD    +       
Sbjct: 161 ET-VLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLEEGWAKA 218

Query: 243 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAA 301
              V +     G+G+D+  D +G       A+      G++ ++G A   + T+ +    
Sbjct: 219 ---VREATG--GAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLL 272

Query: 302 AREVDVIGIF----------RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 351
            R   +IG+               T     + +  G   ++P ++ R   +  E   A +
Sbjct: 273 LRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG---MRPPVSARIPLS--EGRQALQ 327

Query: 352 ISAQGGNAIKVM 363
             A G    K++
Sbjct: 328 DFADGKVYGKMV 339

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  106 bits (268), Expect = 1e-26
 Identities = 59/348 (16%), Positives = 108/348 (31%), Gaps = 72/348 (20%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
           +P L   D+ V+ +A+GI   D   +K      ++          V G + AG+I +VG+
Sbjct: 24  IPALAADDILVQNQAIGINPVD---WKF-----IKANPINWSNGHVPGVDGAGVIVKVGA 75

Query: 93  EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
           +V S  +G RVA                         +  S   +GS A   V       
Sbjct: 76  KVDSKMLGRRVA-------------------------YHTSLKRHGSFAEFTVLNTDRVM 110

Query: 153 KLPDNVSLEEGAMCEPLSVGV---HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 209
            LPDN+S E  A   P    +    A  +  +  +  V+I+G G +  +        G  
Sbjct: 111 TLPDNLSFERAA-ALPC-PLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY- 167

Query: 210 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269
            ++         ++A   G            +                   FD V   + 
Sbjct: 168 -VVDLVSASLSQALAAKRGVRHL------YREPSQVT--------QKYFAIFDAVN-SQN 211

Query: 270 MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF-RYRSTWPLCIEFLRSGK 328
            +  + + +  G +  I      +   + PA  R +    I       +    ++    +
Sbjct: 212 AAALVPSLKANGHIICIQ---DRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQ 268

Query: 329 I-----------DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
                        ++      F F Q  + +A + S Q      +  N
Sbjct: 269 QGEALLTLIAQGKMEIAAPDIFRFEQ--MIEALDHSEQTKLKTVLTLN 314

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  106 bits (268), Expect = 2e-26
 Identities = 87/378 (23%), Positives = 132/378 (34%), Gaps = 80/378 (21%)

Query: 13  NQNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC 68
            Q M    L    G   + I    LP  G  +V VR +A+G+   D+           R 
Sbjct: 26  PQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDI---------AQRQ 76

Query: 69  ANFIVKK--PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP 126
            ++   K    ++G E +G I  VG  V    VGD+V          C L   G+Y    
Sbjct: 77  GSYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKV----------CGLANGGAY---- 122

Query: 127 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHA-CRRANVGPE 184
                         A   + PA      P      + A + E          + A +   
Sbjct: 123 --------------AEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEG 168

Query: 185 TNVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD 243
            +V+I  G+  IG   +  ARAFGA  +  T     +      LGA       +  ED  
Sbjct: 169 ESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS--EDF- 224

Query: 244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL---AKTEMTVALTPA 300
                I+   G G+D+  D +G        + +    G + +I     A  E  V L+P 
Sbjct: 225 --AAVIKAETGQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAE-KVNLSPI 280

Query: 301 AAREVDVIGIF-RYRST--------------WPLCIEFLRSGKIDVKPLITHRFGFTQKE 345
             + + V G   R R+               WPL    L +G +   P+I   F F   +
Sbjct: 281 MVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPL----LEAGTV--APVIHKVFAFE--D 332

Query: 346 IEDAFEISAQGGNAIKVM 363
           + DA  +  +G +  KVM
Sbjct: 333 VADAHRLLEEGSHVGKVM 350

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  101 bits (255), Expect = 1e-24
 Identities = 72/332 (21%), Positives = 115/332 (34%), Gaps = 71/332 (21%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P   P  V V+I+A G    D       K+      +     P ++G + AG +  VG E
Sbjct: 28  PQPAPGQVLVQIEASGTNPLDA------KIRAGEAPHAQQPLPAILGMDLAGTVVAVGPE 81

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           V S  VGD V        G                   G     G+ A      A+L   
Sbjct: 82  VDSFRVGDAV-------FG----------------LTGGVGGLQGTHAQFAAVDARLLAS 118

Query: 154 LPDNVSLEEGAMCEPLSVGVHA----CRRANVGPETNVMIM-GSGPIGLVTLLAARAFGA 208
            P  +++ + +   PL V + A      RA V     V+I  G G +G V +  A A GA
Sbjct: 119 KPAALTMRQAS-VLPL-VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA 176

Query: 209 PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 268
            R+  T      L   R+LGA             + +    ++  G G D+ +D +G   
Sbjct: 177 -RVFAT-ARGSDLEYVRDLGATPI------DASREPEDYAAEHTAGQGFDLVYDTLG-GP 227

Query: 269 TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST------------ 316
            +  + +A +  G V          T  L P + ++    G+F   +             
Sbjct: 228 VLDASFSAVKRFGHVVSCL---GWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEM 284

Query: 317 ----WPLCIEFLRSGKIDVKPLITHR-FGFTQ 343
                 L    +++GK+   P +  R F   +
Sbjct: 285 LREADAL----VQTGKL--APRLDPRTFSIAE 310

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 97.7 bits (244), Expect = 4e-23
 Identities = 65/347 (18%), Positives = 119/347 (34%), Gaps = 71/347 (20%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P     ++ V+I+++ +   D    K +          + K P V+G +  G++E VG+E
Sbjct: 28  PEPKVHEILVKIQSISVNPVD---TKQR-------LMDVSKAPRVLGFDAIGVVESVGNE 77

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           V     GD V                  Y       + GSP  NGS A   +   +L  K
Sbjct: 78  VTMFNQGDIV------------------Y-------YSGSPDQNGSNAEYQLINERLVAK 112

Query: 154 LPDNVSLEE-GAMCEPLSVGVHA----CRRANVGPETNV-------MIMGSGPIGLVTLL 201
            P N+S E+  ++  PL  G+ A         +    N        +I G+G +G +   
Sbjct: 113 APKNISAEQAVSL--PL-TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQ 169

Query: 202 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261
            A+A+G  R+I T    + +   + +GAD        +   ++ + + +      +D  F
Sbjct: 170 IAKAYGL-RVITTASRNETIEWTKKMGADIV------LNHKESLLNQFKTQGIELVDYVF 222

Query: 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCI 321
                D      +   +P G +  I     E    L     + +     F +        
Sbjct: 223 CTFNTDMYYDDMIQLVKPRGHIATI--VAFENDQDLNALKPKSLSFSHEFMFARPLNQTD 280

Query: 322 EFLRSGKI-----------DVKPLITHRFG-FTQKEIEDAFEISAQG 356
           + ++  +              +P  T      T + I  A +I    
Sbjct: 281 DMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESN 327

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 96.5 bits (241), Expect = 1e-22
 Identities = 67/379 (17%), Positives = 124/379 (32%), Gaps = 79/379 (20%)

Query: 14  QNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA 69
           Q+M A       G + L ++    P+ G  +V +++ A  +  +D+           R  
Sbjct: 21  QSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQ---------RQG 71

Query: 70  NFIVKK--PMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCP 126
            +        ++G E +G + E+G   +   ++GD             +L   G      
Sbjct: 72  QYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTA----------MALLPGGGQ---- 117

Query: 127 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHAC--RRANVGP 183
                         A  V  P  L   +P+ ++L + A + E              NV  
Sbjct: 118 --------------AQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT-AFQLLHLVGNVQA 162

Query: 184 ETNVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 242
              V+I  G   +G   +   R  GA   ++T    ++L +A  LGA          ED 
Sbjct: 163 GDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK--EDF 219

Query: 243 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL---AKTEMTVALTP 299
                K     G+G+++  DC+G        +N     G+  L GL            + 
Sbjct: 220 SEATLKFTK--GAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDING-PLFSK 275

Query: 300 AAAREVDVIG-IFRYRST--------------WPLCIEFLRSGKIDVKPLITHRFGFTQK 344
              +   +I  + R R                 P         ++   P++   +  T  
Sbjct: 276 LLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH-FSTEGPQRL--LPVLDRIYPVT-- 330

Query: 345 EIEDAFEISAQGGNAIKVM 363
           EI++A +      N  K++
Sbjct: 331 EIQEAHKYMEANKNIGKIV 349

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 96.6 bits (241), Expect = 1e-22
 Identities = 58/346 (16%), Positives = 108/346 (31%), Gaps = 66/346 (19%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
           P     D+ V +KA+ +   D   +KV+     R          VIG++ AGI+  VG +
Sbjct: 48  PAPAGHDILVEVKAVSVNPVD---YKVR-----RSTPPDGTDWKVIGYDAAGIVSAVGPD 99

Query: 94  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153
           V     GD V                  +       + GS    G+ A   +   ++  +
Sbjct: 100 VTLFRPGDEV------------------F-------YAGSIIRPGTNAEFHLVDERIVGR 134

Query: 154 LPDNVSLEEGAMCEPLSVGVHA----CRRANVGPETNV------MIMGSGPIGLVTLLAA 203
            P  +   E A   PL   + A      R +V            ++ G+G +G + +  A
Sbjct: 135 KPKTLDWAEAA-ALPL-TSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIA 192

Query: 204 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 263
           R      +I T    +     ++LGA         I+       ++           F  
Sbjct: 193 RQRTDLTVIATASRPETQEWVKSLGAHHV------IDHSKPLAAEVAALGLGAPAFVFST 246

Query: 264 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEF 323
              DK  +   +   P G+ CLI          +     + V +     +        + 
Sbjct: 247 THTDKHAAEIADLIAPQGRFCLID---DPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDM 303

Query: 324 LRSGKI-----------DVKPLITHRFG-FTQKEIEDAFEISAQGG 357
              G++            ++  +T+R        ++ A  +   G 
Sbjct: 304 SEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGT 349

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 93.4 bits (233), Expect = 7e-22
 Identities = 70/351 (19%), Positives = 123/351 (35%), Gaps = 93/351 (26%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGHECAGIIEEVG 91
           P     +V +R++A+G+  +D           MR   ++ +   P + G E  G++    
Sbjct: 21  PEAEEGEVVLRVEAVGLNFADHL---------MRLGAYLTRLHPPFIPGMEVVGVV---- 67

Query: 92  SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 151
                   G R            +L   G                    A +V  P    
Sbjct: 68  -------EGRRY----------AALVPQGGL------------------AERVAVPKGAL 92

Query: 152 YKLPDNVSLEEGAMCEPLSVG--VHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGA 208
             LP+ +S EE A   P+S      A +RA   P   V++   +G +G   +  ARA G 
Sbjct: 93  LPLPEGLSPEEAA-AFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL 151

Query: 209 PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG--F 266
            R++      ++L++   LGA+E A  +   E               G+D+  +  G   
Sbjct: 152 -RVLAAASRPEKLALPLALGAEEAATYAEVPERA-KA--------WGGLDLVLEVRGKEV 201

Query: 267 DKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIF-RYRST-------- 316
           ++    +L     GG++  IG A+ E+  +       R + V+G +              
Sbjct: 202 EE----SLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEA 257

Query: 317 ----WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
                P         ++  +P++   F F   E E AF      G+  KV+
Sbjct: 258 LGFLLPRL-----GREL--RPVVGPVFPFA--EAEAAFRALLDRGHTGKVV 299

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 93.5 bits (232), Expect = 2e-21
 Identities = 43/281 (15%), Positives = 80/281 (28%), Gaps = 58/281 (20%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH---------------------FKVKKL 63
            L +     P  GP +V +RI+A  +  SD+                             
Sbjct: 19  ELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPE 78

Query: 64  STMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN 123
             MR     +   M +G+E AG++ E GS   +  +  +            +      Y 
Sbjct: 79  GAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT----------VAAIGGAMY- 127

Query: 124 LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC--EPLSVGVHACRRANV 181
                            +     PA  C  LP+  +  +GA     PL+  +       +
Sbjct: 128 -----------------SQYRCIPADQCLVLPEGATPADGASSFVNPLTA-LGMVETMRL 169

Query: 182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 240
              + ++    +  +G +        G   + I     Q   + +  GA      +    
Sbjct: 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA-DLLKAQGAVHV--CNAASP 226

Query: 241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 281
               D+ +      +G  ++FD  G  K     L       
Sbjct: 227 TFMQDLTEALV--STGATIAFDATGGGKLGGQILTCMEAAL 265

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 92.5 bits (230), Expect = 4e-21
 Identities = 69/391 (17%), Positives = 128/391 (32%), Gaps = 96/391 (24%)

Query: 16  MAAWLL----GIKTLKI-QPYHLPTLG-PQDVKVRIKALGICGSDVH-------HFKVKK 62
             AW++      + L+  Q   +P +  P +V V++ A  +   DV+            K
Sbjct: 22  SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81

Query: 63  LSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 122
              +       + P+ +G + +G++ E G +VK  + GD V                   
Sbjct: 82  RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV------------------- 122

Query: 123 NLCPEMRFFGSPPT--NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV------- 173
                   + + P    G+L+  VV         P +++  + A   P  V +       
Sbjct: 123 --------WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAA-SLPY-VALTAWSAIN 172

Query: 174 -HACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231
                         V+I+G SG +G   +   +A+ A   +          + R LGAD+
Sbjct: 173 KVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA--HVTAVCSQDASELVRKLGADD 230

Query: 232 TAKV----STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
              V    S  +E+                D   D VG   T + A +  +       + 
Sbjct: 231 ---VIDYKSGSVEEQLKS--------LKPFDFILDNVGGS-TETWAPDFLKKWSGATYVT 278

Query: 288 LAKTEMTVALTPAAAREVDVIGIF-------------RYRSTWPL--------CIEFLRS 326
           L    +        A  +   G+               YR  + +          E + +
Sbjct: 279 LVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDA 338

Query: 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGG 357
           GKI  +P+I   F F+  ++ +AF    +G 
Sbjct: 339 GKI--RPVIEQTFPFS--KVPEAFLKVERGH 365

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 63/360 (17%), Positives = 118/360 (32%), Gaps = 95/360 (26%)

Query: 29  QPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE 88
           +P     LG  +V++ ++A G+   D        L  +     +      +G E AG++ 
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDA-------LIALG----MYPGVASLGSEGAGVVV 277

Query: 89  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 148
           E G  V  L  GDRV        G                          +     V   
Sbjct: 278 ETGPGVTGLAPGDRV-------MGMIP----------------------KAFGPLAVADH 308

Query: 149 KLCYKLPDNVSLEEGAMCEPLSVGV------HA-CRRANVGPETNVMI-MGSGPIGLVTL 200
           ++  ++P   S    A     SV +      +A    A + P  ++++   +G +G+  +
Sbjct: 309 RMVTRIPAGWSFARAA-----SVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAI 363

Query: 201 LAARAFGAPRIIIT---------DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
             AR  GA  +  T         ++  + L+ +R    ++    +T    VD     + N
Sbjct: 364 QLARHLGA-EVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDV----VLN 418

Query: 252 AM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAARE------ 304
           ++ G   D S   +               GG+   +G  KT++   +  A A        
Sbjct: 419 SLAGEFADASLRML-------------PRGGRFLELG--KTDVRDPVEVADAHPGVSYQA 463

Query: 305 VDVI--GIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 362
            D +  G  R        +E      +  +PL    +   Q    +A    +Q  +  K+
Sbjct: 464 FDTVEAGPQRIGEMLHELVELFEGRVL--EPLPVTAWDVRQ--APEALRHLSQARHVGKL 519

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 61/359 (16%), Positives = 115/359 (32%), Gaps = 77/359 (21%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR-CANFIVKKPMVIGHECAGIIEEVG 91
           +P  G  D+ VR + +G+  SD+++             +  VK P  IG E  G +  +G
Sbjct: 48  VPLPGDGDLLVRNRFVGVNASDINY--------SAGRYDPSVKPPFDIGFEGIGEVVALG 99

Query: 92  SEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
               +   VG  VA                                 GS A   V PA +
Sbjct: 100 LSASARYTVGQAVAYMAP-----------------------------GSFAEYTVVPASI 130

Query: 151 CYKLPDNVSLEEGAMCEPL---SVGVHACRRANVGP-ETNVMIMGSGPIGLVTLLAARAF 206
              +P     E   +        + +       +   +  ++   +G  G   +  ++  
Sbjct: 131 ATPVPSVKP-EYLTLLVSGTTAYISLK--ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA 187

Query: 207 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 266
               +I T    ++ +  ++LG D      T  E V T    ++     G+DV ++ VG 
Sbjct: 188 KC-HVIGTCSSDEKSAFLKSLGCDRPINYKT--EPVGT---VLKQEYPEGVDVVYESVGG 241

Query: 267 DKTMSTALNATRPGGKVCLIGLA---KTEMTVALTPAAAREVDVIG---------IFRYR 314
                 A++A    G++ +IG     +T   ++   A      ++          +  Y 
Sbjct: 242 A-MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYL 300

Query: 315 STWPLCIE----FLRSGKIDVK------PLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
           S +   +        SG +  +             G   + I  A      G N  K++
Sbjct: 301 SKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGL--ESIFRAVNYMYMGKNTGKIV 357

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 56/250 (22%), Positives = 90/250 (36%), Gaps = 46/250 (18%)

Query: 72  IVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF 130
           IVK  P V G + AG++    S+      GD V     I+ G     + G         F
Sbjct: 56  IVKTYPFVPGIDLAGVVVS--SQHPRFREGDEV-----IATG----YEIG------VTHF 98

Query: 131 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE----GAMCEPLSVGVHACRRANVGPETN 186
                  G  +       +    LP  ++L+E    G      ++ +H      + PE  
Sbjct: 99  -------GGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERG 151

Query: 187 VMIM--GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 244
            +++   +G +G + +      G      T          R LGA E        EDV  
Sbjct: 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTG-KAAEHDYLRVLGAKEV----LAREDVMA 206

Query: 245 DVGKIQNAMGSGI-DVSFDCVGFDKTMSTALNATRPGGKVCLIGLA---KTEMTVALTPA 300
           +  +    +       + D VG  +T++T L+  R GG V + GL    +   TV   P 
Sbjct: 207 ERIR---PLDKQRWAAAVDPVG-GRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVH--PF 260

Query: 301 AAREVDVIGI 310
             R V ++GI
Sbjct: 261 ILRGVSLLGI 270

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 56/251 (22%), Positives = 94/251 (37%), Gaps = 48/251 (19%)

Query: 72  IVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMR 129
           IV++ P+++G + AG +    S       GD V      +                    
Sbjct: 57  IVREYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYELGVSR---------------- 98

Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE----GAMCEPLSVGVHACRRANVGPE- 184
                  +G L+     P      LP N+SL+E    G      ++ VH   +  + PE 
Sbjct: 99  -------DGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEK 151

Query: 185 TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD 243
            +V++ G+ G +G + +      G   +  T  + +     + LGA E        EDV 
Sbjct: 152 GSVLVTGATGGVGGIAVSMLNKRGYDVVAST-GNREAADYLKQLGASEV----ISREDVY 206

Query: 244 TDVGKIQNAMGSGI-DVSFDCVGFDKTMSTALNATRPGGKVCLIGLA---KTEMTVALTP 299
               K   A+       + D VG  K +++ L+  + GG V + GL    +   TV   P
Sbjct: 207 DGTLK---ALSKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATVY--P 260

Query: 300 AAAREVDVIGI 310
              R V ++GI
Sbjct: 261 FILRGVSLLGI 271

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 63/318 (19%), Positives = 96/318 (30%), Gaps = 76/318 (23%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIK--------ALGICGSDVHHFKVKKL 63
           M A +L    G     +Q      L   DV V +         AL I G           
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITG----------- 49

Query: 64  STMRCANFIVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 122
                   I++  PM+ G + AG +    SE      G  V     +  G       G  
Sbjct: 50  -----KGKIIRHFPMIPGIDFAGTVHA--SEDPRFHAGQEV-----LLTG----WGVG-- 91

Query: 123 NLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE----GAMCEPLSVGVHACRR 178
               E  +       G LA +          LP  +S       G       + V A   
Sbjct: 92  ----ENHW-------GGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALED 140

Query: 179 ANVGPETNVMIM--GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 236
           A + P+   +++   SG +G   +      G     ++          ++LGA+      
Sbjct: 141 AGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSG-RESTHGYLKSLGANRI---- 195

Query: 237 TDIEDVDTDVGKIQNAMGSGI-DVSFDCVGFDKTMSTALNATRPGGKVCLIGLA---KTE 292
                +  D       +   +   + D VG DK ++  L     GG V   GLA      
Sbjct: 196 -----LSRDEFAESRPLEKQLWAGAIDTVG-DKVLAKVLAQMNYGGCVAACGLAGGFALP 249

Query: 293 MTVALTPAAAREVDVIGI 310
            TV   P   R V + G+
Sbjct: 250 TTVM--PFILRNVRLQGV 265

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 61/374 (16%), Positives = 107/374 (28%), Gaps = 90/374 (24%)

Query: 17   AAWLLGIKT------LKIQPY---HLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
                + + +      ++       +      QD    +    +   DV            
Sbjct: 1529 EHAFVNVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDV-----------M 1577

Query: 68   CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
             A   +    + G                   G RV                        
Sbjct: 1578 LATGKLSPDSIPGKWLTRDCMLGMEFSGRDASGRRV------------------------ 1613

Query: 128  MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV------HA-CRRAN 180
            M           LA  V+      +++P   +LEE A     SV +      ++   R  
Sbjct: 1614 MGMV----PAEGLATSVLLLQHATWEVPSTWTLEEAA-----SVPIVYTTAYYSLVVRGR 1664

Query: 181  VGPETNVMI-MGSGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADETAKVS-- 236
            + P  +V+I  GSG +G   +  A + G           +R    AR    DET   +  
Sbjct: 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSR 1724

Query: 237  -TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT---- 291
             T  E             G G+D+  + +  +K +  ++      G    + + K     
Sbjct: 1725 DTSFEQHVLRHTA-----GKGVDLVLNSLAEEK-LQASVRCLAQHG--RFLEIGKFDLSN 1776

Query: 292  ----EMTVALTPAAAREVDVIGIF-----RYRSTWPLCIEFLRSGKIDVKPLITHRFGFT 342
                 M V L       + +  +F      ++    L    ++ G   V+PL    F  T
Sbjct: 1777 NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGV--VQPLKCTVFPRT 1834

Query: 343  QKEIEDAFEISAQG 356
              ++E AF   AQG
Sbjct: 1835 --KVEAAFRYMAQG 1846

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 13/110 (11%), Positives = 33/110 (30%), Gaps = 10/110 (9%)

Query: 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 238
                    + +G GP+ L  +L +  +G  R+ + +++     ++R +           
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIE------GLG 170

Query: 239 IEDVDTDVGKIQNAMGSGIDVSFD---CVGFDKTMSTALNATRPGGKVCL 285
           ++ V+   G      G   DV           +             ++  
Sbjct: 171 VDGVNVITGDETVIDGLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIY 220

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	366
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.98
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.83
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.2
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.98
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.78
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.6
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.51
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.5
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.47
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.39
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.27
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.18
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.11
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	98.08
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.07
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.0
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.92
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.83
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.8
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.79
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.76
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.71
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.68
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.68
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.54
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.52
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.49
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.47
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.46
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.43
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.42
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.4
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.38
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.36
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.24
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.24
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.23
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.19
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.19
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.18
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	97.13
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.08
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.08
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.07
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.06
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.05
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.05
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	97.03
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.02
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.98
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.96
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.95
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.94
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.9
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.87
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.84
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.84
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.83
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.78
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.78
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.77
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.74
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.74
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	96.7
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.7
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.7
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.69
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.68
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.65
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.65
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.64
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.62
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	96.61
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.61
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.57
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.55
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.53
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.52
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.52
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.51
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.48
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.47
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.47
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.46
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.46
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	96.46
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.44
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	96.44
4had_A	350	Probable oxidoreductase protein; structural genomi	96.44
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.43
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	96.43
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.43
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.42
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.41
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.4
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.39
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.37
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.37
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.36
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.35
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.34
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.33
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.33
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.32
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.3
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	96.3
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.3
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.3
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.28
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.28
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.27
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.27
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.26
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.26
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.25
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.25
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	96.25
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	96.24
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.24
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.24
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.24
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.23
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	96.22
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.22
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.21
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.2
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.18
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.18
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.18
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.17
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.16
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.16
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.16
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	96.16
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.14
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.14
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	96.14
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.13
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.13
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	96.12
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.12
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.11
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.11
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.1
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.1
1xxl_A	239	YCGJ protein; structural genomics, protein structu	96.1
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.1
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.1
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.08
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	96.06
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	96.05
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	96.05
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.05
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.03
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.03
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	96.02
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.02
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.02
2i7c_A	283	Spermidine synthase; transferase, structural genom	96.02
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.01
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.01
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	96.0
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.0
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.0
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.0
2frx_A	479	Hypothetical protein YEBU; rossmann-type S-adenosy	96.0
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	95.98
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.98
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	95.97
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.97
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.96
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.95
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	95.94
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.94
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.93
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	95.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	95.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	95.92
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	95.91
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.91
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.91
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.9
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.9
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.9
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	95.89
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	95.89
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.88
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.87
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.87
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.87
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.87
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	95.84
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	95.84
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.84
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.83
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.83
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.82
2o07_A	304	Spermidine synthase; structural genomics, structur	95.82
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.81
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.81
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	95.8
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.8
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	95.78
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.78
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.77
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	95.77
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	95.77
1xkq_A	280	Short-chain reductase family member (5D234); parra	95.77
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	95.77
3imf_A	257	Short chain dehydrogenase; structural genomics, in	95.77
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	95.76
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.76
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	95.76
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	95.75
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.75
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	95.74
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.74
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	95.74
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.74
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	95.72
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	95.72
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	95.72
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	95.72
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.71
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.71
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	95.7
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	95.68
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	95.68
2esr_A	177	Methyltransferase; structural genomics, hypothetic	95.68
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	95.68
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.68
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.67
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	95.65
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	95.64
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.64
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.64
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	95.64
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	95.62
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.62
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	95.62
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	95.61
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.61
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	95.61
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.61
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	95.61
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	95.6
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.6
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.6
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	95.59
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	95.58
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	95.58
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	95.58
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	95.57
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	95.56
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	95.56
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	95.56
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.55
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.55
3rih_A	293	Short chain dehydrogenase or reductase; structural	95.53
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.53
2cmg_A	262	Spermidine synthase; transferase, putrescine amino	95.53
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.52
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.51
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.51
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	95.5
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	95.5
2vdv_E	246	TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl	95.5
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	95.5
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	95.5
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.49
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.49
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	95.49
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.48
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	95.48
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.47
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	95.46
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.45
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	95.45
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	95.45
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.44
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	95.43
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.42
3cxt_A	291	Dehydrogenase with different specificities; rossma	95.4
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.39
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.39
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.38
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.38
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	95.38
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	95.37
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	95.37
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	95.36
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.35
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.35
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.35
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.33
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.32
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.31
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.3
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	95.3
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	95.29
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.28
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.28
2xvm_A	199	Tellurite resistance protein TEHB; antibiotic resi	95.28
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.27
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.27
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.26
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.26
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	95.26
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.26
3k6r_A	278	Putative transferase PH0793; structural genomics,	95.26
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	95.25
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	95.25
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	95.24
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.22
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	95.21
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.21
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.21
3ggd_A	245	SAM-dependent methyltransferase; YP_325210.1, stru	95.21
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	95.2
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.18
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	95.18
2igt_A	332	SAM dependent methyltransferase; alpha-beta sandwi	95.18
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.18
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.18
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.18
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.17
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	95.15
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.14
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.14
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.12
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	95.12
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.11
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	95.1
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	95.09
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.09
1spx_A	278	Short-chain reductase family member (5L265); paral	95.08
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.08
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.07
3p9n_A	189	Possible methyltransferase (methylase); RV2966C, a	95.06
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.05
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	95.05
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.05
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.04
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.04
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.03
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	95.01
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	94.99
3h2b_A	203	SAM-dependent methyltransferase; alpha-beta protei	94.99
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	94.99
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	94.99
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	94.98
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	94.98
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	94.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	94.97
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	94.97
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.96
3i9f_A	170	Putative type 11 methyltransferase; structural gen	94.96
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	94.95
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	94.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	94.95
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	94.95
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	94.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	94.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	94.93
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	94.93
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	94.91
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	94.91
3jwh_A	217	HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena	94.91
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	94.91
2frn_A	278	Hypothetical protein PH0793; structural genomics,	94.9
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	94.88
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	94.88
3lpm_A	259	Putative methyltransferase; structural genomics, p	94.88
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	94.87
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	94.87
2ex4_A	241	Adrenal gland protein AD-003; methyltransferase, s	94.86
4h3v_A	390	Oxidoreductase domain protein; structural genomics	94.85
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	94.85
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	94.84
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	94.83
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	94.83
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	94.83
3cvo_A	202	Methyltransferase-like protein of unknown functio;	94.8
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	94.8
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	94.78
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	94.77
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	94.76
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	94.76
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	94.75
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.75
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	94.75
4htf_A	285	S-adenosylmethionine-dependent methyltransferase;	94.72
1ws6_A	171	Methyltransferase; structural genomics, riken stru	94.69
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.66
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.66
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	94.64
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	94.63
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	94.63
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	94.62
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	94.61
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	94.61
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	94.6
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	94.6
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	94.6
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	94.59
1xtp_A	254	LMAJ004091AAA; SGPP, structural genomics, PSI, pro	94.58
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	94.57
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	94.57
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.56
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	94.55
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	94.52
4dzr_A	215	Protein-(glutamine-N5) methyltransferase, release	94.51
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	94.5
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	94.49
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	94.48
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	94.45
3dou_A	191	Ribosomal RNA large subunit methyltransferase J; c	94.45
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.44
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	94.43
3o4f_A	294	Spermidine synthase; aminopropyltransferase, polya	94.43
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	94.43
1jsx_A	207	Glucose-inhibited division protein B; methyltransf	94.42
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	94.42
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	94.41
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	94.4
2dul_A	378	N(2),N(2)-dimethylguanosine tRNA methyltransferas;	94.4
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	94.4
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	94.39
2avn_A	260	Ubiquinone/menaquinone biosynthesis methyltransfe	94.38

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=4.8e-60  Score=439.81  Aligned_cols=345  Identities=37%  Similarity=0.631  Sum_probs=309.2

Q ss_pred             CcccceEEEEeeCCceEEEEecCC--------CCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccc
Q 017793           11 DKNQNMAAWLLGIKTLKIQPYHLP--------TLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHE   82 (366)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e   82 (366)
                      ++++|+++++.+++.++++++|.|        +|++|||||||+++|||++|++++.+...     +.....+|.++|||
T Consensus         5 ~~~~mka~~~~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~-----~~~~~~~p~v~G~E   79 (363)
T 3m6i_A            5 ASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCI-----GPMIVECDHVLGHE   79 (363)
T ss_dssp             CCSCCEEEEECTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBS-----SSCBCCSCEECCCE
T ss_pred             CcccceeEEEeCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCC-----CCccCCCCcccCcc
Confidence            678899999999999999999999        99999999999999999999998874321     22335679999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc
Q 017793           83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE  162 (366)
Q Consensus        83 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~  162 (366)
                      ++|+|+++|++|++|++||||++.+..+|++|.+|+.|+++.|++..+.+....+|+|+||++++++.++++|+ +++++
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~  158 (363)
T 3m6i_A           80 SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYEN  158 (363)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHH
T ss_pred             eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHH
Confidence            99999999999999999999999999999999999999999999999888766899999999999999999999 99999


Q ss_pred             cccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC---C
Q 017793          163 GAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD---I  239 (366)
Q Consensus       163 aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~---~  239 (366)
                      ||++.+++|||++++++++++|++|||+|+|++|++++|+||.+|+++|++++++++|.++++++ ++.++++..+   .
T Consensus       159 aa~~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~  237 (363)
T 3m6i_A          159 GAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSA  237 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCH
T ss_pred             HHhhhHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccch
Confidence            99888899999999889999999999999999999999999999997699999999999999999 7776665422   2


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHH
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL  319 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (366)
                      +++.+.++++.  .+.++|+||||+|++..++.++++|+++|+++.+|.......++...+..+++++.+++.+.+++++
T Consensus       238 ~~~~~~v~~~t--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  315 (363)
T 3m6i_A          238 EESAKKIVESF--GGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPR  315 (363)
T ss_dssp             HHHHHHHHHHT--SSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHH
T ss_pred             HHHHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHH
Confidence            45555555443  3678999999999987899999999999999999987666667777888999999999888889999


Q ss_pred             HHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcC-CCceEEEeeC
Q 017793          320 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL  366 (366)
Q Consensus       320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi~~  366 (366)
                      +++++++|++.+.+.++++|+|  +++++|++.++++ ...+|+|+++
T Consensus       316 ~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          316 AIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             HHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             HHHHHHhCCCChHHceeeeeeH--HHHHHHHHHHhccCCCeEEEEEec
Confidence            9999999999888899999999  9999999999998 6788999874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=6.5e-60  Score=439.20  Aligned_cols=343  Identities=29%  Similarity=0.541  Sum_probs=307.1

Q ss_pred             CCcccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           10 GDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      .+|++||++++.+++.++++++|.|+|++|||+|||.|+|||++|++++.|         .++..+|.++|||++|+|++
T Consensus        19 ~~p~~mkA~v~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G---------~~~~~~p~v~G~e~~G~V~~   89 (370)
T 4ej6_A           19 YFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHG---------EFPSTPPVTLGHEFCGIVVE   89 (370)
T ss_dssp             --CCEEEEEEEEETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTT---------SSCCCSSEECCCSEEEEEEE
T ss_pred             ccchheEEEEEecCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcC---------CCCCCCCeecCcceEEEEEE
Confidence            467889999999999999999999999999999999999999999999983         34567899999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhh
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPL  169 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~  169 (366)
                      +|+++++|++||||++.+..+|+.|.+|+.|++++|++..+++. ..+|+|+||++++++.++++|+++++++||...++
T Consensus        90 vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aal~~~~  168 (370)
T 4ej6_A           90 AGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI-HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPL  168 (370)
T ss_dssp             ECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCTTGGGGHHHH
T ss_pred             ECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCC-CCCCcceEEEEEchhhEEECCCCCCHHHHhhhhHH
Confidence            99999999999999999999999999999999999999888875 37899999999999999999999999999976789


Q ss_pred             HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ++||++++.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++..  .++.+.+++.
T Consensus       169 ~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~~i~~~  246 (370)
T 4ej6_A          169 ACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVEAIAGP  246 (370)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS--SCHHHHHHST
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC--cCHHHHHHhh
Confidence            99999998899999999999999999999999999999988999999999999999999999988644  5666666552


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhhhcCcEEEEeeccCCChHHHHHHHHCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSG  327 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  327 (366)
                      ....++++|+||||+|.+..++.++++|+++|+++.+|....  ...++...+..+++++.|++.....++++++++++|
T Consensus       247 ~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g  326 (370)
T 4ej6_A          247 VGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATG  326 (370)
T ss_dssp             TSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTT
T ss_pred             hhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcC
Confidence            112345999999999988889999999999999999997654  445667778899999999998888899999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHHcCC-CceEEEeeC
Q 017793          328 KIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFNL  366 (366)
Q Consensus       328 ~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~-~~gkvvi~~  366 (366)
                      ++.+.+.++++|+|  +++++|++.+.+++ ..+|+++++
T Consensus       327 ~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          327 AIEIDRMISRRISL--DEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             CSCCGGGEEEEECG--GGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             CCChhHcEEEEEEH--HHHHHHHHHHHcCCCCeEEEEEcc
Confidence            99888999999999  99999999998876 457888753

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-59  Score=430.00  Aligned_cols=347  Identities=44%  Similarity=0.811  Sum_probs=302.9

Q ss_pred             CcccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           11 DKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      |+++||++++.+++.++++++|.|+|++|||+|||+++|||++|++++.+...     +.....+|.++|||++|+|+++
T Consensus         1 m~~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~-----~~~~~~~p~v~G~E~~G~V~~v   75 (352)
T 1e3j_A            1 MASDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRI-----ADFIVKDPMVIGHEASGTVVKV   75 (352)
T ss_dssp             ---CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBS-----SSCBCCSCEECCCEEEEEEEEE
T ss_pred             CcccCEEEEEEcCCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCC-----ccccCCCCccccccceEEEEEe
Confidence            56679999999999999999999999999999999999999999998874211     1112357999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhH
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS  170 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~  170 (366)
                      |++|++|++||||++.+..+|+.|.+|+.|++++|++..+++.....|+|+||++++++.++++|+++++++||++.+++
T Consensus        76 G~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~  155 (352)
T 1e3j_A           76 GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS  155 (352)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTHHHHH
T ss_pred             CCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhhchHH
Confidence            99999999999999999999999999999999999998887765568999999999999999999999999999887889


Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +||++++.+++++|++|||+|+|++|++++|+|+..|+ +|+++++++++.++++++|++.++++.. ..++.+.+.+..
T Consensus       156 ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~-~~~~~~~i~~~~  233 (352)
T 1e3j_A          156 VGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDP-AKEEESSIIERI  233 (352)
T ss_dssp             HHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCT-TTSCHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCcc-cccHHHHHHHHh
Confidence            99999988899999999999999999999999999999 5999999999999999999999888642 135555555443


Q ss_pred             Hh-hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCC
Q 017793          251 NA-MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       251 ~~-~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~  329 (366)
                      .. .+.++|++||++|....++.++++|+++|+++.+|.......++...++.+++++.+++.+..+++++++++++|++
T Consensus       234 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i  313 (352)
T 1e3j_A          234 RSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRC  313 (352)
T ss_dssp             HHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSC
T ss_pred             ccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCC
Confidence            10 14689999999998878899999999999999999755444566667888999999998878889999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCC-CceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~-~~gkvvi~~  366 (366)
                      .+.+.++++|+|  +++++|++.+.+++ ..||+|+++
T Consensus       314 ~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          314 NVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             CCGGGEEEEEEG--GGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             ChHHheeEEecH--HHHHHHHHHHhcCCCCceEEEEec
Confidence            888889999999  99999999999987 689999874

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=5.2e-59  Score=430.39  Aligned_cols=335  Identities=28%  Similarity=0.477  Sum_probs=302.1

Q ss_pred             ceEEEEeeCCceEEEEecCCC-CCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~-~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |||+++++++.++++|+|.|+ ++||||||||+|+|||++|++.+.         +.....+|+++|||++|+|+++|++
T Consensus         1 MkAvv~~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~---------g~~~~~~P~i~G~E~~G~V~~vG~~   71 (346)
T 4a2c_A            1 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIF---------KNGAHYYPITLGHEFSGYIDAVGSG   71 (346)
T ss_dssp             CEEEEECSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHH---------SSCSSSSSBCCCCEEEEEEEEECTT
T ss_pred             CCEEEEecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHc---------CCCCCCCCccccEEEEEEEEEECCC
Confidence            899999999999999999998 579999999999999999999888         4445678999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV  173 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~  173 (366)
                      |++|++||||.+.+...|+.|.+|..|++++|++..+++. ..+|+|+||++++++.++++|+++++++||++.++++++
T Consensus        72 V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~~~  150 (346)
T 4a2c_A           72 VDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGS-RRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL  150 (346)
T ss_dssp             CCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHHHHH
T ss_pred             cccccCCCeEEeeeccCCCCcccccCCccccCCCcccccC-CCCcccccccccchheEEECCCCCCHHHHHhchHHHHHH
Confidence            9999999999999999999999999999999999888875 578999999999999999999999999999888888888


Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ++++..++++|++|||+|+|++|++++|+|+++|+.++++++++++|.++++++|++.++++..  .++.+.++.+..  
T Consensus       151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~--~~~~~~~~~~~~--  226 (346)
T 4a2c_A          151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVLRE--  226 (346)
T ss_dssp             HHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHHHGG--
T ss_pred             HHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC--CCHHHHHHhhcc--
Confidence            8888899999999999999999999999999999988899999999999999999999998754  456666655543  


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCcee---echHhhhcCcEEEEeecc------CCChHHHHHHH
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV---ALTPAAAREVDVIGIFRY------RSTWPLCIEFL  324 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l  324 (366)
                      ++++|+++|++|.+..++.++++++++|+++.+|........   +...++.+++++.|++..      .++++++++++
T Consensus       227 ~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~  306 (346)
T 4a2c_A          227 LRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLL  306 (346)
T ss_dssp             GCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHH
T ss_pred             cCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHH
Confidence            678999999999988999999999999999999977665433   334567899999998653      34689999999


Q ss_pred             HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      ++|++.+.+.++++|+|  +++++|++.+++++..||+||.
T Consensus       307 ~~g~l~~~~lI~~~~~l--~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          307 TERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             HTTCSCCGGGEEEEECH--HHHHHHHHHHTTSCCCSEEEEC
T ss_pred             HcCCCCCCccEeEEEeH--HHHHHHHHHHHcCCCceEEEEE
Confidence            99999888999999999  9999999999999999999986

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=7.8e-59  Score=430.28  Aligned_cols=343  Identities=45%  Similarity=0.826  Sum_probs=303.0

Q ss_pred             ccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      ++||++++.+++.++++++|.|+|++|||+|||.++|||++|++++.|...     +.....+|.++|||++|+|+++|+
T Consensus         6 ~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-----~~~~~~~p~v~G~E~~G~V~~vG~   80 (356)
T 1pl8_A            6 PNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRI-----GNFIVKKPMVLGHEASGTVEKVGS   80 (356)
T ss_dssp             CCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEE-----TTEECSSCEECCCEEEEEEEEECT
T ss_pred             cCceEEEEecCCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCC-----CCccCCCCcccccceEEEEEEECC
Confidence            568999999999999999999999999999999999999999998874221     111235789999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHH
Q 017793           93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG  172 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a  172 (366)
                      +|++|++||||++.+..+|++|.+|+.|++++|++..+++....+|+|+||++++++.++++|+++++++|+++.++++|
T Consensus        81 ~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~~~ta  160 (356)
T 1pl8_A           81 SVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVG  160 (356)
T ss_dssp             TCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhchHHHH
Confidence            99999999999999999999999999999999999887775456899999999999999999999999999987788999


Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC-CcchHHHHHHHHH
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IEDVDTDVGKIQN  251 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~  251 (366)
                      |++++.+++++|++|||+|+|++|++++|+|+..|+.+|+++++++++.++++++|++.++++... ..++.+.+++.. 
T Consensus       161 ~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~-  239 (356)
T 1pl8_A          161 IHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL-  239 (356)
T ss_dssp             HHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH-
T ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh-
Confidence            999988899999999999999999999999999999789999999999999999999998886421 134444554433 


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDV  331 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~  331 (366)
                        +.++|+|||++|++..++.++++|+++|+++.+|.......++...++.+++++.+++.+..+++++++++++|++.+
T Consensus       240 --~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~  317 (356)
T 1pl8_A          240 --GCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNV  317 (356)
T ss_dssp             --TSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCC
T ss_pred             --CCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCCh
Confidence              478999999999887889999999999999999975544456666788899999999877788999999999999988


Q ss_pred             CCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          332 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       332 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+.++++|+|  +++++|++.++++ ..||+|+++
T Consensus       318 ~~~i~~~~~l--~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          318 KPLVTHRFPL--EKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             GGGEEEEEEG--GGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             HHheEEEecH--HHHHHHHHHHhCC-CceEEEEeC
Confidence            8899999999  9999999999998 889999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=8.2e-58  Score=426.81  Aligned_cols=343  Identities=25%  Similarity=0.397  Sum_probs=297.5

Q ss_pred             cCCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793            9 EGDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus         9 ~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      +.||++||++++.+++ +++++++|.|+|++|||||||+++|||++|+++++|..        ....+|.++|||++|+|
T Consensus         3 ~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~P~v~GhE~~G~V   74 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKD--------PEGLFPCILGHEAAGIV   74 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCC--------TTCCSSBCCCCEEEEEE
T ss_pred             cccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCC--------CCCCCCccCCccceEEE
Confidence            4678899999999885 59999999999999999999999999999999998431        12467999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CC------------------CCCCCcceEEEEe
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS------------------PPTNGSLAHKVVH  146 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~g~~~e~~~~  146 (366)
                      +++|++|++|++||||++.+..+|++|.+|+.|++++|++..+.   +.                  ....|+|+||+++
T Consensus        75 ~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v  154 (378)
T 3uko_A           75 ESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVV  154 (378)
T ss_dssp             EEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEE
T ss_pred             EEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEe
Confidence            99999999999999999999999999999999999999986541   11                  1123799999999


Q ss_pred             cCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          147 PAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       147 ~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      +++.++++|+++++++||.+. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.+++
T Consensus       155 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a  234 (378)
T 3uko_A          155 HDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETA  234 (378)
T ss_dssp             EGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH
T ss_pred             chhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            999999999999999999886 788999987 568999999999999999999999999999997899999999999999


Q ss_pred             HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCce--eechHhh
Q 017793          225 RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMT--VALTPAA  301 (366)
Q Consensus       225 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~--~~~~~~~  301 (366)
                      +++|++.++++.....++.+.++++.   ++++|+||||+|.+..++.++++++++ |+++.+|.......  ++...+.
T Consensus       235 ~~lGa~~vi~~~~~~~~~~~~i~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~  311 (378)
T 3uko_A          235 KKFGVNEFVNPKDHDKPIQEVIVDLT---DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV  311 (378)
T ss_dssp             HTTTCCEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred             HHcCCcEEEccccCchhHHHHHHHhc---CCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh
Confidence            99999999987644567777776664   349999999999988899999999996 99999997653333  3333344


Q ss_pred             hcCcEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          302 AREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       302 ~~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                       ++.++.+++..    .++++++++++++|++.+.+.++++|+|  +++++|++.+++++.. |+||++
T Consensus       312 -~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          312 -TGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTL--GEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             -TTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHTTCTTCS-EEEEET
T ss_pred             -cCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeH--HHHHHHHHHHHCCCce-EEEEec
Confidence             48889887643    4578899999999999888899999999  9999999999988765 999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=8.1e-58  Score=422.31  Aligned_cols=342  Identities=32%  Similarity=0.583  Sum_probs=286.8

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      |+++||++++.+++ .++++++|.|+|++|||+|||.++|||++|+++++|..+..     ....+|.++|||++|+|++
T Consensus         1 ~m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-----~~~~~p~v~G~E~~G~V~~   75 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQ-----SRIKPPQIMGHEVAGEVVE   75 (348)
T ss_dssp             --CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHH-----HHCCSSEECCCEEEEEEEE
T ss_pred             CCCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCc-----ccCCCCCccCccceEEEEE
Confidence            34568999999887 89999999999999999999999999999999988521100     1245789999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhh
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPL  169 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~  169 (366)
                      +|++|++|++||||++.+..+|++|.+|+.|++++|++..+++. ..+|+|+||++++++.++++|+++++++||+++++
T Consensus        76 vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~  154 (348)
T 2d8a_A           76 IGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPL  154 (348)
T ss_dssp             ECTTCCSCCTTCEEEECCEECCSCCC------------CEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHHHH
T ss_pred             ECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecC-CCCCcCcceEEeChHHeEECCCCCCHHHHHhhhHH
Confidence            99999999999999999999999999999999999999877664 46799999999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ++||++++++++ +|++|||+|+|++|++++|+|+..|+.+|+++++++++.++++++|++.++++..  +++.+.++++
T Consensus       155 ~ta~~~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~  231 (348)
T 2d8a_A          155 GNAVDTVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDI  231 (348)
T ss_dssp             HHHHHHHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT--SCHHHHHHHH
T ss_pred             HHHHHHHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC--cCHHHHHHHH
Confidence            999999988889 9999999999999999999999999967889999999999999999999887643  5666666555


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeec-hHhhhcCcEEEEeecc--CCChHHHHHHHHC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY--RSTWPLCIEFLRS  326 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~  326 (366)
                      .  .+.++|++||++|....++.++++|+++|+++.+|.......++. ..++.+++++.+++..  .++++++++++++
T Consensus       232 ~--~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~  309 (348)
T 2d8a_A          232 T--DGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQS  309 (348)
T ss_dssp             T--TTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHH
T ss_pred             c--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHc
Confidence            3  256899999999987789999999999999999997655445555 5677889999997654  4678999999999


Q ss_pred             CCCCCCCceEEEec-CChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          327 GKIDVKPLITHRFG-FTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       327 g~~~~~~~~~~~~~-l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      |++++.+.++++|+ |  +++++|++.+++ ...||+|+++
T Consensus       310 g~i~~~~~i~~~~~gl--~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          310 GKLNLDPIITHKYKGF--DKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             TCCCCTTTEEEEEESS--TTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             CCCChHHhheeeCCCH--HHHHHHHHHHhC-CCceEEEEee
Confidence            99888899999999 9  999999999987 5789999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.3e-56  Score=418.05  Aligned_cols=342  Identities=24%  Similarity=0.379  Sum_probs=293.5

Q ss_pred             ccCCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793            8 DEGDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI   86 (366)
Q Consensus         8 ~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   86 (366)
                      ....|++||++++.++. +++++++|.|+|+++||+|||.++|||++|++++.|.         .+..+|.++|||++|+
T Consensus         3 ~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---------~~~~~P~v~GhE~~G~   73 (373)
T 1p0f_A            3 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEI---------IPSKFPVILGHEAVGV   73 (373)
T ss_dssp             CTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTS---------SCCCSSBCCCCCEEEE
T ss_pred             ccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCC---------CCCCCCcccCcCceEE
Confidence            34567889999999885 6999999999999999999999999999999988842         2245799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CCC-----------------CCCCcceEEEEe
Q 017793           87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP-----------------PTNGSLAHKVVH  146 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~~  146 (366)
                      |+++|++|++|++||||++.+..+|++|.+|+.|++++|++..+.   +..                 ...|+|+||+++
T Consensus        74 V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v  153 (373)
T 1p0f_A           74 VESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVV  153 (373)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEE
T ss_pred             EEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEE
Confidence            999999999999999999999999999999999999999986431   110                 135999999999


Q ss_pred             cCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          147 PAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       147 ~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      +++.++++|++++++ ||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+||..|+.+|+++++++++.+++
T Consensus       154 ~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  232 (373)
T 1p0f_A          154 ADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA  232 (373)
T ss_dssp             ETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             chhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            999999999999999 88886 788999988 468899999999999999999999999999997799999999999999


Q ss_pred             HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCC--CceeechHhh
Q 017793          225 RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT--EMTVALTPAA  301 (366)
Q Consensus       225 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~  301 (366)
                      +++|++.++++.....++.+.++++.   ++++|+|||++|+...++.++++|+++ |+++.+|....  ...++...+.
T Consensus       233 ~~lGa~~vi~~~~~~~~~~~~i~~~t---~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  309 (373)
T 1p0f_A          233 IELGATECLNPKDYDKPIYEVICEKT---NGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL  309 (373)
T ss_dssp             HHTTCSEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHH
T ss_pred             HHcCCcEEEecccccchHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhc
Confidence            99999999887532346766666553   348999999999877899999999999 99999996653  2344445566


Q ss_pred             hcCcEEEEeecc---CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          302 AREVDVIGIFRY---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       302 ~~~~~~~~~~~~---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+. ++.+++..   .++++++++++++|++.+.+.++++|+|  +++++|++.+++++. +|+|+++
T Consensus       310 ~~~-~i~g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          310 TGR-SLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL--DQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             TTC-EEEECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECG--GGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             cCc-eEEeeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            667 88887643   3689999999999999777888999999  999999999988764 7999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.7e-56  Score=417.68  Aligned_cols=342  Identities=26%  Similarity=0.424  Sum_probs=294.7

Q ss_pred             cCCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793            9 EGDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus         9 ~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      +..|++||++++.++. +++++++|.|+|++|||+|||.++|||++|++++.|.         ....+|.++|||++|+|
T Consensus         3 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---------~~~~~P~v~GhE~~G~V   73 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK---------KKALFPVVLGHECAGIV   73 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT---------SCCCSSBCCCCEEEEEE
T ss_pred             CCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC---------CCCCCCcccCccccEEE
Confidence            3467889999999885 6999999999999999999999999999999988842         12357999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc----c---cCCC-----------------CCCCcceEE
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR----F---FGSP-----------------PTNGSLAHK  143 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~-----------------~~~g~~~e~  143 (366)
                      +++|++|++|++||||++.+..+|++|.+|+.|++++|++..    +   .+..                 ...|+|+||
T Consensus        74 ~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey  153 (376)
T 1e3i_A           74 ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY  153 (376)
T ss_dssp             EEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSE
T ss_pred             EEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeE
Confidence            999999999999999999999999999999999999999754    1   0110                 125999999


Q ss_pred             EEecCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017793          144 VVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL  221 (366)
Q Consensus       144 ~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~  221 (366)
                      ++++++.++++|+++++++||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.
T Consensus       154 ~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  233 (376)
T 1e3i_A          154 TVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF  233 (376)
T ss_dssp             EEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             EEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            999999999999999999999886 788999987 568999999999999999999999999999997799999999999


Q ss_pred             HHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeechHh
Q 017793          222 SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA  300 (366)
Q Consensus       222 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~  300 (366)
                      ++++++|++.++++....+++.+.++++.   ++++|+|||++|+...++.++++|+++ |+++.+|.......++...+
T Consensus       234 ~~a~~lGa~~vi~~~~~~~~~~~~v~~~~---~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~  310 (376)
T 1e3i_A          234 PKAKALGATDCLNPRELDKPVQDVITELT---AGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDV  310 (376)
T ss_dssp             HHHHHTTCSEEECGGGCSSCHHHHHHHHH---TSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHH
T ss_pred             HHHHHhCCcEEEccccccchHHHHHHHHh---CCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHh
Confidence            99999999999887532346777776654   348999999999877899999999999 99999997544444555556


Q ss_pred             hhcCcEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          301 AAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       301 ~~~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ..++ ++.+++..    .++++++++++++|++.+.+.++++|+|  +++++|++.+++++ .+|+||++
T Consensus       311 ~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          311 ILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--ESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             HTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             hccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH--HHHHHHHHHHhcCC-cceEEEeC
Confidence            6677 88887643    3578999999999999777889999999  99999999999886 57999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=3.1e-56  Score=415.67  Aligned_cols=342  Identities=24%  Similarity=0.423  Sum_probs=294.0

Q ss_pred             cCCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793            9 EGDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus         9 ~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      ...|++||++++.++. +++++++|.|+|++|||+|||.++|||++|++++.|.         .+..+|.++|||++|+|
T Consensus         3 ~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---------~~~~~P~v~GhE~~G~V   73 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGT---------LVTPLPVIAGHEAAGIV   73 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTS---------SCCCSSBCCCCSEEEEE
T ss_pred             CCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCC---------CCCCCCcccCcCceEEE
Confidence            3457789999999885 6999999999999999999999999999999998842         22237999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CCC-----------------CCCCcceEEEEec
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP-----------------PTNGSLAHKVVHP  147 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~~~  147 (366)
                      +++|++|++|++||||++.+..+|++|.+|+.|++++|++..+.   +..                 ...|+|+||++++
T Consensus        74 ~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~  153 (374)
T 2jhf_A           74 ESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD  153 (374)
T ss_dssp             EEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEE
T ss_pred             EEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEc
Confidence            99999999999999999999999999999999999999986532   110                 1259999999999


Q ss_pred             CCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017793          148 AKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR  225 (366)
Q Consensus       148 ~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  225 (366)
                      ++.++++|+++++++||.++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++
T Consensus       154 ~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~  233 (374)
T 2jhf_A          154 EISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK  233 (374)
T ss_dssp             GGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             hHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            99999999999999999886 788999988 4688999999999999999999999999999977999999999999999


Q ss_pred             HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCC--CceeechHhhh
Q 017793          226 NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT--EMTVALTPAAA  302 (366)
Q Consensus       226 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~  302 (366)
                      ++|++.++++.....++.+.++++.   ++++|+|||++|.+..++.++++|+++ |+++.+|....  ...++...+..
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  310 (374)
T 2jhf_A          234 EVGATECVNPQDYKKPIQEVLTEMS---NGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS  310 (374)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHT
T ss_pred             HhCCceEecccccchhHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhc
Confidence            9999999887542345666666553   348999999999877899999999999 99999996653  23445555666


Q ss_pred             cCcEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          303 REVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       303 ~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++ ++.+++..    .++++++++++++|++.+.+.++++|+|  +++++|++.+++++. +|+|+++
T Consensus       311 ~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          311 GR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             TC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            77 88887643    3578999999999999877889999999  999999999998864 7999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.9e-56  Score=415.90  Aligned_cols=342  Identities=24%  Similarity=0.398  Sum_probs=294.6

Q ss_pred             cCCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhh-hhhhcccccccccCccCCCCcccccceeEE
Q 017793            9 EGDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVH-HFKVKKLSTMRCANFIVKKPMVIGHECAGI   86 (366)
Q Consensus         9 ~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~-~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   86 (366)
                      +..|++||++++.++. +++++++|.|+|++|||+|||.++|||++|++ ++.|.         .+..+|.++|||++|+
T Consensus         3 ~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~---------~~~~~P~v~GhE~~G~   73 (374)
T 1cdo_A            3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK---------HKDGFPVVLGHEGAGI   73 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTC---------CTTSCSEECCCCEEEE
T ss_pred             CCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCC---------CCCCCCcccCccceEE
Confidence            4567889999999875 69999999999999999999999999999999 88842         2245799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CCC-----------------CCCCcceEEEEe
Q 017793           87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP-----------------PTNGSLAHKVVH  146 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~~  146 (366)
                      |+++|++|++|++||||++.+..+|++|.+|+.|++++|++..+.   +..                 ...|+|+||+++
T Consensus        74 V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v  153 (374)
T 1cdo_A           74 VESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVV  153 (374)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEE
T ss_pred             EEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEE
Confidence            999999999999999999999999999999999999999986532   110                 025999999999


Q ss_pred             cCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          147 PAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       147 ~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      +++.++++|+++++++||.++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+++
T Consensus       154 ~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          154 NQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             EGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             chhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            999999999999999999886 788999988 568899999999999999999999999999997799999999999999


Q ss_pred             HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCC-CceeechHhhh
Q 017793          225 RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT-EMTVALTPAAA  302 (366)
Q Consensus       225 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~  302 (366)
                      +++|++.++++.....++.+.++++.   ++++|++||++|....++.++++|+++ |+++.+|.... ...++...+..
T Consensus       234 ~~lGa~~vi~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  310 (374)
T 1cdo_A          234 KVFGATDFVNPNDHSEPISQVLSKMT---NGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIA  310 (374)
T ss_dssp             HHTTCCEEECGGGCSSCHHHHHHHHH---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHT
T ss_pred             HHhCCceEEeccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhc
Confidence            99999998887532346777666654   348999999999877899999999999 99999997654 33444455666


Q ss_pred             cCcEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          303 REVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       303 ~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +. ++.+++..    .++++++++++++|++.+.+.++++|+|  +++++|++.+++++. +|+|+++
T Consensus       311 ~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          311 GR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             TC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecH--HHHHHHHHHHHCCCe-eEEEEeC
Confidence            77 88887643    3578999999999999877889999999  999999999998865 7999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=8.5e-57  Score=416.13  Aligned_cols=337  Identities=25%  Similarity=0.324  Sum_probs=293.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhh-hhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH-HFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~-~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.+++.++++++|.|+|++|||+|||+++|||++|++ +..         |..+..+|.++|||++|+|+++|++
T Consensus         1 MkA~~~~~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~---------g~~~~~~p~v~G~E~~G~V~~vG~~   71 (352)
T 3fpc_A            1 MKGFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFE---------GAIGERHNMILGHEAVGEVVEVGSE   71 (352)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHS---------CTTCCCSSEECCCEEEEEEEEECTT
T ss_pred             CeEEEEccCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhC---------CCCCCCCCcccCCcceEEEEEECCC
Confidence            789999999999999999999999999999999999999999 456         3344567999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCcceEEEEecCC--ceEECCCCCCccccccch-h
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~  168 (366)
                      +++|++||||++.+..+|+.|.+|+.|++..|......  -....+|+|+||++++++  .++++|+++++++|+.++ +
T Consensus        72 v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~  151 (352)
T 3fpc_A           72 VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDM  151 (352)
T ss_dssp             CCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTH
T ss_pred             CCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccch
Confidence            99999999999999999999999999998888764311  123468999999999976  899999999999999885 8


Q ss_pred             hHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          169 LSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       169 ~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      ++|||++++++++++|++|||+|+|++|++++|+|+..|+.+|++++++++|.++++++|++.++++..  +++.+.+++
T Consensus       152 ~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~v~~  229 (352)
T 3fpc_A          152 MTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILK  229 (352)
T ss_dssp             HHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGG--SCHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCC--cCHHHHHHH
Confidence            899999999899999999999999999999999999999977999999999999999999999988643  577777766


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechH----hhhcCcEEEEeecc--CCChHHHHH
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDVIGIFRY--RSTWPLCIE  322 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~  322 (366)
                      +.  .+.++|+|||++|++..++.++++|+++|+++.+|.......++...    ...+..++.++...  ..+++++++
T Consensus       230 ~t--~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  307 (352)
T 3fpc_A          230 AT--DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLID  307 (352)
T ss_dssp             HT--TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHH
T ss_pred             Hc--CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHH
Confidence            54  36689999999999778999999999999999999765443333332    23567888887654  567999999


Q ss_pred             HHHCCCCCCCCceEEEec-CChhhHHHHHHHHHcCCC-ceEEEeeC
Q 017793          323 FLRSGKIDVKPLITHRFG-FTQKEIEDAFEISAQGGN-AIKVMFNL  366 (366)
Q Consensus       323 ~l~~g~~~~~~~~~~~~~-l~~~~~~~a~~~~~~~~~-~gkvvi~~  366 (366)
                      ++++|++.+.+.++++|+ |  +++++|++.+++++. .+|+|+++
T Consensus       308 l~~~g~i~~~~~i~~~~~gl--~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          308 LVFYKRVDPSKLVTHVFRGF--DNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             HHHTTSCCGGGGEEEEEEST--THHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             HHHcCCCChhHhheeeCCCH--HHHHHHHHHHHhCCCCcEEEEEEe
Confidence            999999988888999998 9  999999999998755 48999975

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=2.2e-56  Score=411.51  Aligned_cols=333  Identities=26%  Similarity=0.388  Sum_probs=295.9

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      +||++++.++ ++++++++|.|+|++|||+|||+++|||++|+++++|...       ....+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~~~P~v~G~E~~G~V~~vG~   74 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWP-------VKPTLPFIPGHEGVGYVSAVGS   74 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSS-------SCCCSSBCCCSEEEEEEEEECS
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCC-------CCCCCCcccCCcceEEEEEECC
Confidence            4888888876 5799999999999999999999999999999999985321       1145799999999999999999


Q ss_pred             CCCCCCCCCEEE-EcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           93 EVKSLEVGDRVA-LEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        93 ~v~~~~~Gd~V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      ++++|++||||. ..+..+|+.|.+|+.|+++.|++..+.+. ..+|+|+||++++++.++++|+++++++||.+. .+.
T Consensus        75 ~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  153 (340)
T 3s2e_A           75 GVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGV  153 (340)
T ss_dssp             SCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHH
T ss_pred             CCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCC-CCCCcceeEEEechHHEEECCCCCCHHHhhcccchhH
Confidence            999999999995 46678999999999999999999887775 468999999999999999999999999999776 788


Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      |||++++..++++|++|||+|+|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  +++.+.+++  
T Consensus       154 ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~~~~~~~~--  228 (340)
T 3s2e_A          154 TVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD--TDPAAWLQK--  228 (340)
T ss_dssp             HHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHH--
T ss_pred             HHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHHH--
Confidence            99999988999999999999999999999999999999 8999999999999999999999988654  566666655  


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCC
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~  329 (366)
                       +.+ ++|++||++|+...++.++++|+++|+++.+|........+...+..+++++.+++.. .++++++++++++|++
T Consensus       229 -~~g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  306 (340)
T 3s2e_A          229 -EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDV  306 (340)
T ss_dssp             -HHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSC
T ss_pred             -hCC-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCC
Confidence             224 8999999999888999999999999999999987766667777788899999998876 5689999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .  +. .+.|+|  +++++|++.+++++..||+|+++
T Consensus       307 ~--~~-~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          307 K--AT-VSTAKL--DDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             C--CC-EEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             C--ce-EEEEeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            4  44 467888  99999999999999999999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=8.4e-57  Score=414.72  Aligned_cols=336  Identities=32%  Similarity=0.585  Sum_probs=296.6

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~~-~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.+++. ++++++|.|+|++|||+|||.++|||++|++++.|.....     ....+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-----~~~~~p~v~G~E~~G~V~~vG~~   75 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWAR-----GRIRPPLVTGHEFSGVVEAVGPG   75 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHH-----HHCCSSEECCCEEEEEEEEECTT
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCcc-----ccCCCCCcCCccceEEEEEECCC
Confidence            68888888765 9999999999999999999999999999999988532100     01457899999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV  173 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~  173 (366)
                      +++|++||||++.+..+|++|.+|+.|++++|++..+++. ...|+|+||++++++.++++|+++++++||++.++++||
T Consensus        76 v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~  154 (343)
T 2dq4_A           76 VRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV  154 (343)
T ss_dssp             CCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHHHHH
T ss_pred             CCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecC-CCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHHHHH
Confidence            9999999999999999999999999999999999877664 467999999999999999999999999999888888999


Q ss_pred             HHHH-hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          174 HACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       174 ~~l~-~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ++++ .+++ +|++|||+|+|++|++++|+|+..|+.+|+++++++++.++++++ ++.++++..  +++.+.++++.  
T Consensus       155 ~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~--~~~~~~~~~~~--  228 (343)
T 2dq4_A          155 HTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE--EDLLEVVRRVT--  228 (343)
T ss_dssp             HHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT--SCHHHHHHHHH--
T ss_pred             HHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc--cCHHHHHHHhc--
Confidence            9998 7889 999999999999999999999999996689999999999999999 998887643  56777666553  


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeec-hHhhhcCcEEEEeecc--CCChHHHHHHHHCCCC
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~  329 (366)
                       +.++|+|||++|+...++.++++|+++|+++.+|.......++. ..++.+++++.+++..  .++++++++++++|++
T Consensus       229 -~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~  307 (343)
T 2dq4_A          229 -GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRV  307 (343)
T ss_dssp             -SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSS
T ss_pred             -CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCC
Confidence             67899999999987789999999999999999997655555666 6678899999998654  5679999999999998


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+.+.++++|+|  +++++|++.+++++. ||+|+++
T Consensus       308 ~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          308 DLSPLLTHRLPL--SRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             CCGGGEEEEEEG--GGHHHHHHHHHHSSC-SEEEEET
T ss_pred             ChHHheeEEecH--HHHHHHHHHHhcCCc-eEEEEee
Confidence            878999999999  999999999998877 9999874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-56  Score=415.04  Aligned_cols=336  Identities=26%  Similarity=0.379  Sum_probs=288.0

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCC-CCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793           11 DKNQNMAAWLLGIK-TLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE   88 (366)
Q Consensus        11 ~~~~~~~~~~~~~~-~~~~~~~~~p~-~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   88 (366)
                      .+++||++++.+++ +++++++|.|+ |++|||+|||.++|||++|++++.|.....     ....+|.++|||++|+|+
T Consensus        12 ~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-----~~~~~p~v~G~E~~G~V~   86 (359)
T 1h2b_A           12 GVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHEL-----LQPKLPYTLGHENVGYIE   86 (359)
T ss_dssp             -----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHH-----HCCCSSEECCCCEEEEEE
T ss_pred             ChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccc-----cCCCCCeecCcCceEEEE
Confidence            46779999999884 79999999999 999999999999999999999988532100     023579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccc---c
Q 017793           89 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA---M  165 (366)
Q Consensus        89 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa---~  165 (366)
                      ++|++|++|++||||+..+..+|++|.+|+.|++++|++...++. ..+|+|+||++++++.++++|+++++++||   .
T Consensus        87 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~  165 (359)
T 1h2b_A           87 EVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAP  165 (359)
T ss_dssp             EECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGG
T ss_pred             EECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccccc-CCCCcccceEEechHhEEECCCCCCHHHHhhccc
Confidence            999999999999999988889999999999999999998776664 468999999999999999999999999998   4


Q ss_pred             ch-hhHHHHHHHHh--CCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcc
Q 017793          166 CE-PLSVGVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIED  241 (366)
Q Consensus       166 ~~-~~~~a~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~  241 (366)
                      +. ...|||+++++  +++++|++|||+|+|++|++++|+|+.. |+ +|++++++++|.++++++|++.++++.+  + 
T Consensus       166 l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~-  241 (359)
T 1h2b_A          166 LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARR--D-  241 (359)
T ss_dssp             GGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C-
T ss_pred             hhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccc--h-
Confidence            44 57789999987  8999999999999999999999999999 99 7999999999999999999999988753  3 


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCChH--HHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChH
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFDK--TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWP  318 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  318 (366)
                      +.+.++++.  .+.++|+|||++|++.  .++.++++  ++|+++.+|..... .++...++.+++++.+++.. .++++
T Consensus       242 ~~~~v~~~~--~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~  316 (359)
T 1h2b_A          242 PVKQVMELT--RGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELH  316 (359)
T ss_dssp             HHHHHHHHT--TTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHH
T ss_pred             HHHHHHHHh--CCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHH
Confidence            666665553  2458999999999876  77888777  99999999976544 55566678899999998765 56799


Q ss_pred             HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++++++|++  ++.+ ++|+|  +++++|++.+++++..||+|+++
T Consensus       317 ~~~~l~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          317 ELVTLALQGKV--RVEV-DIHKL--DEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHHHTTSC--CCCE-EEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHcCCC--cceE-EEEeH--HHHHHHHHHHHcCCCceEEEeeC
Confidence            99999999998  5667 89999  99999999999998889999974

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.8e-56  Score=416.89  Aligned_cols=335  Identities=25%  Similarity=0.416  Sum_probs=290.9

Q ss_pred             ccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           13 NQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        13 ~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ++||++++.+++ +++++++|.|+|+++||+|||.++|||++|++++.|         ..+..+|.++|||++|+|+++|
T Consensus         5 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g---------~~~~~~P~v~GhE~~G~V~~vG   75 (371)
T 1f8f_A            5 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQ---------KYPVPLPAVLGHEGSGIIEAIG   75 (371)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTT---------SSCCCSSBCCCCEEEEEEEEEC
T ss_pred             ccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcC---------CCCCCCCcccCcccceEEEEeC
Confidence            458999998875 699999999999999999999999999999999884         2334579999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC----------------------CCCCCcceEEEEecCC
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----------------------PPTNGSLAHKVVHPAK  149 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~e~~~~~~~  149 (366)
                      ++|++|++||||++.+ .+|++|.+|+.|++++|++...++.                      ....|+|+||++++++
T Consensus        76 ~~v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~  154 (371)
T 1f8f_A           76 PNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSREN  154 (371)
T ss_dssp             TTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGG
T ss_pred             CCCCCCCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechh
Confidence            9999999999999999 9999999999999999998652210                      0135999999999999


Q ss_pred             ceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793          150 LCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  227 (366)
Q Consensus       150 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  227 (366)
                      .++++|+++++++||.+. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+..|+.+|+++++++++.++++++
T Consensus       155 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l  234 (371)
T 1f8f_A          155 NTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL  234 (371)
T ss_dssp             GEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred             heEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence            999999999999999886 889999998 578999999999999999999999999999997799999999999999999


Q ss_pred             CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhhhcCc
Q 017793          228 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREV  305 (366)
Q Consensus       228 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~  305 (366)
                      |++.++++..  +++.+.++++.   ++++|+|||++|.+..++.++++|+++|+++.+|....  ...++...++.+++
T Consensus       235 Ga~~vi~~~~--~~~~~~~~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~  309 (371)
T 1f8f_A          235 GATHVINSKT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGK  309 (371)
T ss_dssp             TCSEEEETTT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTC
T ss_pred             CCCEEecCCc--cCHHHHHHHhc---CCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCC
Confidence            9999988643  46666665543   34899999999987789999999999999999987653  23455556778899


Q ss_pred             EEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          306 DVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       306 ~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++.+++..    .++++++++++++|++.+.+.+++ |+|  +++++|++.+++++. +|+|+++
T Consensus       310 ~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l--~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          310 TILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF--DEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             EEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEG--GGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             EEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecH--HHHHHHHHHHHCCCc-eEEEEee
Confidence            99998654    256899999999999977778888 999  999999999998865 7999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=8.2e-56  Score=412.81  Aligned_cols=341  Identities=25%  Similarity=0.398  Sum_probs=292.6

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      .|++||++++.++. +++++++|.|+|+++||+|||.++|||++|++++.|..        ....+|.++|||++|+|++
T Consensus         3 ~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~P~v~GhE~~G~V~~   74 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGAD--------PEGCFPVILGHLGAGIVES   74 (373)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCC--------TTCCSSBCCCCEEEEEEEE
T ss_pred             CccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCC--------CCCCCCccccccccEEEEE
Confidence            46789999999885 79999999999999999999999999999999988431        1135799999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CC-----C------------CCCCcceEEEEecCC
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----P------------PTNGSLAHKVVHPAK  149 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~------------~~~g~~~e~~~~~~~  149 (366)
                      +|++|++|++||||++.+..+|++|.+|+.|++++|++..+.   +.     .            ...|+|+||++++++
T Consensus        75 vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  154 (373)
T 2fzw_A           75 VGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADI  154 (373)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             ECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchh
Confidence            999999999999999999999999999999999999975421   11     0            135999999999999


Q ss_pred             ceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793          150 LCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  227 (366)
Q Consensus       150 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  227 (366)
                      .++++|+++++++||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++
T Consensus       155 ~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l  234 (373)
T 2fzw_A          155 SVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF  234 (373)
T ss_dssp             GEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred             heEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence            999999999999999886 788999988 468899999999999999999999999999997799999999999999999


Q ss_pred             CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCC--CceeechHhhhcC
Q 017793          228 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT--EMTVALTPAAARE  304 (366)
Q Consensus       228 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~  304 (366)
                      |++.++++.....++.+.++++.   ++++|+|||++|....++.++++|+++ |+++.+|....  ...++...+..++
T Consensus       235 Ga~~vi~~~~~~~~~~~~v~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  311 (373)
T 2fzw_A          235 GATECINPQDFSKPIQEVLIEMT---DGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR  311 (373)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC
T ss_pred             CCceEeccccccccHHHHHHHHh---CCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC
Confidence            99998887532346666666553   348999999999877899999999999 99999997653  2344555566677


Q ss_pred             cEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          305 VDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       305 ~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                       ++.++..+    .++++++++++++|++.+.+.++++|+|  +++++|++.+++++. +|+|+++
T Consensus       312 -~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          312 -TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF--DEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             -EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEG--GGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             -EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence             88887643    3578999999999999877889999999  999999999998865 7999875

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.6e-56  Score=410.40  Aligned_cols=333  Identities=25%  Similarity=0.430  Sum_probs=298.1

Q ss_pred             ceEEEEee--CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793           15 NMAAWLLG--IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS   92 (366)
Q Consensus        15 ~~~~~~~~--~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   92 (366)
                      |||+++..  ++.++++++|.|+|+||||||||.|+|||++|+++++         |.++..+|.++|||++|+|+++|+
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~---------G~~~~~~p~i~GhE~aG~V~~vG~   71 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAA---------GDFGNKAGTVLGHEGIGIVKEIGA   71 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHT---------TTTCCCTTCBCCSEEEEEEEEECT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhc---------CCCCCCCCcccceeEEEEEEEECc
Confidence            78988863  3579999999999999999999999999999999998         445567899999999999999999


Q ss_pred             CCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           93 EVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        93 ~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +|++|++||||++.+. ..|+.|.+|..+..+.|+.....+. ..+|+|+||+.++++.++++|+++++++|++++ +..
T Consensus        72 ~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~  150 (348)
T 4eez_A           72 DVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGV  150 (348)
T ss_dssp             TCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHH
T ss_pred             eeeecccCCeEeecccccccCccccccCCccccccccccccc-ccCCcceeeccccccceeecCCCCCHHHHhhccccee
Confidence            9999999999998765 4679999999999999998777664 578999999999999999999999999999886 788


Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      |||++++..++++|++|||+|+|++|.+++|+|+.++..+|++++++++|.++++++|++.++++..  .++.+.++++.
T Consensus       151 ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~--~~~~~~v~~~t  228 (348)
T 4eez_A          151 TTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD--VNPVDEIKKIT  228 (348)
T ss_dssp             HHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C--CCHHHHHHHHT
T ss_pred             eEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC--CCHHHHhhhhc
Confidence            8999999888999999999999999999999999886558999999999999999999999998754  57777776654


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCC
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~  329 (366)
                        .+.++|.+++++++...+..++++++++|+++.+|.......++...+..+++++.|++.+ +.+++++++++++|++
T Consensus       229 --~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i  306 (348)
T 4eez_A          229 --GGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKV  306 (348)
T ss_dssp             --TSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSC
T ss_pred             --CCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCC
Confidence              4778999999999999999999999999999999987777777888899999999998776 5679999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                        ++.+ ++|+|  +++++|++.+++++..||+||++
T Consensus       307 --~p~~-~~~~l--~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          307 --KPIV-ATRKL--EEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             --CCCE-EEECG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             --EEEE-EEEeH--HHHHHHHHHHHCCCCccEEEEEc
Confidence              5544 78999  99999999999999999999985

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=6.3e-56  Score=409.31  Aligned_cols=333  Identities=26%  Similarity=0.417  Sum_probs=291.0

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.+++ +++++++|.|+|++|||||||+++|||++|+++++|..      ...+..+|.++|||++|+|+++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~------~~~~~~~p~i~G~e~~G~V~~vG~~   74 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPA------AQYAYGLPLTLGHEGVGTVAELGEG   74 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCT------TTCCSCSSEECCSEEEEEEEEECTT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCC------CccCCCCCcccCcccEEEEEEECCC
Confidence            7899999885 49999999999999999999999999999999998532      1123567999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCC-Cccc----cCCCCCCCcceEEEEec-CCceEECCCCCCccccccch
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP-EMRF----FGSPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAMCE  167 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~g~~~e~~~~~-~~~~~~~P~~~~~~~aa~~~  167 (366)
                      +++|++||||++.+..+|+.|.+|+.+++++|. ...+    .+ ...+|+|+||++++ ++.++++|+ +++++||.+.
T Consensus        75 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g-~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~  152 (345)
T 3jv7_A           75 VTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG-LGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLT  152 (345)
T ss_dssp             CCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBT-TTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGG
T ss_pred             CCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCC-cCCCceeeEEEEecchhceEeCCC-CCHHHhhhhh
Confidence            999999999999999999999999999999994 3332    12 24589999999999 999999999 9999999775


Q ss_pred             -hhHHHHHHHHhC--CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHH
Q 017793          168 -PLSVGVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT  244 (366)
Q Consensus       168 -~~~~a~~~l~~~--~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  244 (366)
                       ++.|||+++++.  ++++|++|||+|+|++|++++|+|+..|..+|++++++++|.++++++|++.++++..   ++.+
T Consensus       153 ~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~  229 (345)
T 3jv7_A          153 DAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAAD  229 (345)
T ss_dssp             TTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST---THHH
T ss_pred             hhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC---cHHH
Confidence             889999999875  8999999999999999999999999995558999999999999999999999988643   6667


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-CCChHHHHH
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIE  322 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  322 (366)
                      .++++.  .+.++|+||||+|++..++.++++|+++|+++.+|.... ...++. .++.+++++.++... .++++++++
T Consensus       230 ~v~~~t--~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~  306 (345)
T 3jv7_A          230 AIRELT--GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVA  306 (345)
T ss_dssp             HHHHHH--GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHH
T ss_pred             HHHHHh--CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHH
Confidence            776664  356899999999998899999999999999999997665 445554 677888999988776 567999999


Q ss_pred             HHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          323 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       323 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++|++.+   ++++|++  +++++|++.+.+++..||+|+++
T Consensus       307 l~~~g~l~~---~~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          307 LARAGRLDI---HTETFTL--DEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             HHHTTCCCC---CEEEECS--TTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HHHcCCCce---EEEEEcH--HHHHHHHHHHHcCCCceeEEeCC
Confidence            999999954   4589999  99999999999999999999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=4.9e-56  Score=410.41  Aligned_cols=327  Identities=22%  Similarity=0.291  Sum_probs=284.0

Q ss_pred             CcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      |+++||++++.++ ++++++++|.|+|++|||+|||.|+|||++|++++.|..        ....+|.++|||++|+|++
T Consensus         1 M~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~p~i~G~E~~G~V~~   72 (348)
T 3two_A            1 MRVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEW--------KEGIYPMIPGHEIAGIIKE   72 (348)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSS--------SCCCSSBCCCCCEEEEEEE
T ss_pred             CceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCC--------CCCCCCeecCcceeEEEEE
Confidence            4567999999877 679999999999999999999999999999999988431        1246799999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCC---------CCCCcceEEEEecCCceEECCCCCC
Q 017793           90 VGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSP---------PTNGSLAHKVVHPAKLCYKLPDNVS  159 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~e~~~~~~~~~~~~P~~~~  159 (366)
                      +|++|++|++||||++.+. .+|++|.+|+.|++++|+ ....+..         ...|+|+||++++++.++++|++++
T Consensus        73 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  151 (348)
T 3two_A           73 VGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAP  151 (348)
T ss_dssp             ECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSC
T ss_pred             ECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEechhhEEECCCCCC
Confidence            9999999999999998664 689999999999999998 3333321         1239999999999999999999999


Q ss_pred             ccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793          160 LEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD  238 (366)
Q Consensus       160 ~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  238 (366)
                      +++||.+. .+.|||+++++.++++|++|||+|+|++|++++|+|+..|+ +|+++++++++.++++++|++.++ .  +
T Consensus       152 ~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~--~  227 (348)
T 3two_A          152 LEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T--D  227 (348)
T ss_dssp             HHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S--S
T ss_pred             HHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C--C
Confidence            99999776 78899999988899999999999999999999999999999 899999999999999999999887 2  2


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCce-eechHhh-hcCcEEEEeecc-C
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMT-VALTPAA-AREVDVIGIFRY-R  314 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~~~~~~~~-~  314 (366)
                      ...       +    ..++|+|||++|++..++.++++|+++|+++.+|... .... ++...+. .+++++.+++.+ .
T Consensus       228 ~~~-------~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  296 (348)
T 3two_A          228 PKQ-------C----KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGI  296 (348)
T ss_dssp             GGG-------C----CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCH
T ss_pred             HHH-------H----hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCH
Confidence            111       1    2289999999998878999999999999999999776 4444 5656666 899999998876 5


Q ss_pred             CChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       315 ~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+++++++++++|+++  +.+ ++|+|  +++++|++.+.+++..||+|+++
T Consensus       297 ~~~~~~~~l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          297 KETQEMVDFSIKHNIY--PEI-DLILG--KDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             HHHHHHHHHHHHTTCC--CCE-EEECG--GGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             HHHHHHHHHHHhCCCC--ceE-EEEEH--HHHHHHHHHHHcCCCceEEEEec
Confidence            6799999999999994  444 78999  99999999999999999999974

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.5e-56  Score=415.76  Aligned_cols=341  Identities=26%  Similarity=0.415  Sum_probs=296.2

Q ss_pred             CCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793           10 GDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE   88 (366)
Q Consensus        10 ~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   88 (366)
                      .|.-+||++++.+++ .++++++|.|+|++|||||||.++|||++|++++.|.+        ....+|.++|||++|+|+
T Consensus        13 ~~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~--------~~~~~P~v~GhE~~G~V~   84 (380)
T 1vj0_A           13 MMGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGED--------PRVPLPIILGHEGAGRVV   84 (380)
T ss_dssp             -CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCC--------TTCCSSBCCCCEEEEEEE
T ss_pred             HhhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCC--------CCCCCCcccCcCcEEEEE
Confidence            455779999999887 99999999999999999999999999999999988421        013578999999999999


Q ss_pred             EeCCCCC------CCCCCCEEEEcCCcCCCCCcccc-CCCCCCCCCccccCCC-------CCCCcceEEEEe-cCCceEE
Q 017793           89 EVGSEVK------SLEVGDRVALEPGISCGHCSLCK-AGSYNLCPEMRFFGSP-------PTNGSLAHKVVH-PAKLCYK  153 (366)
Q Consensus        89 ~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~g~~~e~~~~-~~~~~~~  153 (366)
                      ++| +|+      +|++||||++.+..+|++|.+|+ .|++++|++..+++..       ...|+|+||+++ +++.+++
T Consensus        85 ~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~  163 (380)
T 1vj0_A           85 EVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLK  163 (380)
T ss_dssp             EES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEE
T ss_pred             EeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEE
Confidence            999 999      99999999999999999999999 9999999987766531       357999999999 9999999


Q ss_pred             CCCCCCcc-ccccchhhHHHHHHHHhCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          154 LPDNVSLE-EGAMCEPLSVGVHACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       154 ~P~~~~~~-~aa~~~~~~~a~~~l~~~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      +|++++++ +|+++++++|||++++..+ +++|++|||+|+|++|++++|+|+..|+.+|+++++++++.++++++|++.
T Consensus       164 iP~~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~  243 (380)
T 1vj0_A          164 VSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL  243 (380)
T ss_dssp             ECTTSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSE
T ss_pred             CCCCCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcE
Confidence            99999999 8888789999999998888 999999999999999999999999999548999999999999999999999


Q ss_pred             eeecCC-CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-C-CceeechH-hhhcCcEE
Q 017793          232 TAKVST-DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-T-EMTVALTP-AAAREVDV  307 (366)
Q Consensus       232 ~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~~~~~~~~  307 (366)
                      ++++.. ...++.+.++++.  .+.++|+|||++|++..++.++++|+++|+++.+|... . ...++... ++.+++++
T Consensus       244 vi~~~~~~~~~~~~~v~~~~--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i  321 (380)
T 1vj0_A          244 TLNRRETSVEERRKAIMDIT--HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATF  321 (380)
T ss_dssp             EEETTTSCHHHHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEE
T ss_pred             EEeccccCcchHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEE
Confidence            888641 1245555555443  24589999999998778999999999999999999765 4 44555556 77889999


Q ss_pred             EEeecc-CCChHHHHHHHHC--CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          308 IGIFRY-RSTWPLCIEFLRS--GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       308 ~~~~~~-~~~~~~~~~~l~~--g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+++.+ .++++++++++++  |++  .+.++++|+|  +++++|++.+++++.. |+|+++
T Consensus       322 ~g~~~~~~~~~~~~~~l~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          322 KGIWVSDTSHFVKTVSITSRNYQLL--SKLITHRLPL--KEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             EECCCCCHHHHHHHHHHHHTCHHHH--GGGCCEEEEG--GGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             EEeecCCHHHHHHHHHHHHhhcCCe--eeEEEEEEeH--HHHHHHHHHHhcCCCc-eEEEEe
Confidence            998765 5679999999999  998  7788889999  9999999999998888 999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.3e-54  Score=399.29  Aligned_cols=332  Identities=30%  Similarity=0.451  Sum_probs=290.0

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.+++ +++++++|.|+|++|||+|||.++|||++|++++.|...       ....+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~~~p~v~GhE~~G~V~~vG~~   73 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP-------VKPKLPLIPGHEGVGIVEEVGPG   73 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-------SCCCSSBCCCSCEEEEEEEECTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCC-------cCCCCCeeccccceEEEEEECCC
Confidence            6788888775 799999999999999999999999999999999885321       12357999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793           94 VKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      |++|++||||++.+.. +|++|.+|+.|++++|++..+.+. ..+|+|+||++++++.++++|+++++++||.++ .+.|
T Consensus        74 v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~t  152 (339)
T 1rjw_A           74 VTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVT  152 (339)
T ss_dssp             CCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHH
T ss_pred             CCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeec-CCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHH
Confidence            9999999999987654 599999999999999998877663 468999999999999999999999999998776 7788


Q ss_pred             HHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ||+++++.++++|++|||+|+|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .++.+.+.++. 
T Consensus       153 a~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~--~~~~~~~~~~~-  228 (339)
T 1rjw_A          153 TYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK--EDAAKFMKEKV-  228 (339)
T ss_dssp             HHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT--SCHHHHHHHHH-
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC--ccHHHHHHHHh-
Confidence            9999987789999999999988899999999999999 8999999999999999999998887643  46666665543 


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID  330 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  330 (366)
                         +++|++||++|....++.++++|+++|+++.+|.......++...++.+++++.+++.. .++++++++++++|+++
T Consensus       229 ---~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~  305 (339)
T 1rjw_A          229 ---GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK  305 (339)
T ss_dssp             ---SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCC
T ss_pred             ---CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCC
Confidence               58999999999877899999999999999999976655556666677899999998765 46799999999999994


Q ss_pred             CCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +  . +++|+|  +++++|++.+++++..||+|+++
T Consensus       306 ~--~-~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          306 T--I-IEVQPL--EKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             C--C-EEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             c--c-EEEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            3  3 478999  99999999999998899999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.1e-54  Score=403.39  Aligned_cols=333  Identities=22%  Similarity=0.256  Sum_probs=286.3

Q ss_pred             ccCCcccceEEEEee--CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeE
Q 017793            8 DEGDKNQNMAAWLLG--IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG   85 (366)
Q Consensus         8 ~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G   85 (366)
                      +.+||++||++++.+  ++.++++++|.|+|++|||||||+++|||++|++++.|.+.       ....+|.++|||++|
T Consensus        21 ~~~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~~~P~v~GhE~~G   93 (363)
T 3uog_A           21 QSMMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMG-------LDLAFPFVPASDMSG   93 (363)
T ss_dssp             --CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTT-------CCCCSSBCCCCEEEE
T ss_pred             eccCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC-------CCCCCCcCcccceEE
Confidence            445788899999994  47899999999999999999999999999999999985321       125679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCC---ccc-cCCCCCCCcceEEEEecCCceEECCCCCCcc
Q 017793           86 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---MRF-FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE  161 (366)
Q Consensus        86 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~  161 (366)
                      +|+++|+++++|++||||++.+..      .|..+. +.|..   ... ++ ...+|+|+||++++++.++++|++++++
T Consensus        94 ~V~~vG~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g-~~~~G~~aey~~v~~~~~~~iP~~~~~~  165 (363)
T 3uog_A           94 VVEAVGKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLG-GAHPGVLSEYVVLPEGWFVAAPKSLDAA  165 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTT-TTSCCCCBSEEEEEGGGEEECCTTSCHH
T ss_pred             EEEEECCCCCCCCCCCEEEEeccc------cccccc-cccccccccccccC-cCCCCcceeEEEechHHeEECCCCCCHH
Confidence            999999999999999999987654      456666 77763   111 22 2467999999999999999999999999


Q ss_pred             ccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCC
Q 017793          162 EGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI  239 (366)
Q Consensus       162 ~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~  239 (366)
                      +||.++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+..|+ +|+++++++++.++++++|++.+++  ...
T Consensus       166 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~--~~~  242 (363)
T 3uog_A          166 EASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN--RLE  242 (363)
T ss_dssp             HHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEE--TTT
T ss_pred             HHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEc--CCc
Confidence            999886 778999999 57899999999999999999999999999999 7999999999999999999999887  344


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-CCCh
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTW  317 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~  317 (366)
                      +++.+.++++..  +.++|++|||+|+ ..+..++++|+++|+++.+|..... ..++...+..+++++.++... .+++
T Consensus       243 ~~~~~~v~~~~~--g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  319 (363)
T 3uog_A          243 EDWVERVYALTG--DRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRAL  319 (363)
T ss_dssp             SCHHHHHHHHHT--TCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHH
T ss_pred             ccHHHHHHHHhC--CCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHH
Confidence            677777776653  5689999999995 4789999999999999999976543 456667788899999998876 5679


Q ss_pred             HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       318 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++++++|++  ++.++++|+|  +++++|++.+++++ .||+||++
T Consensus       320 ~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          320 EDLVGAVDRLGL--KPVIDMRYKF--TEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHHHHHHHTC--CCCEEEEEEG--GGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHHHHHHHcCCC--ccceeeEEcH--HHHHHHHHHHHcCC-CccEEEeC
Confidence            999999999998  7888999999  99999999999998 99999985

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=4.5e-55  Score=410.82  Aligned_cols=336  Identities=24%  Similarity=0.439  Sum_probs=287.8

Q ss_pred             cceEEEEeeCCceEEEEecCCCC-CC-----CcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793           14 QNMAAWLLGIKTLKIQPYHLPTL-GP-----QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~p~~-~~-----~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      +||++++.+++.++++++|.|+| ++     +||+|||.++|||++|+++++|         .....+|.++|||++|+|
T Consensus         2 ~MkA~~~~~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G---------~~~~~~p~v~GhE~~G~V   72 (398)
T 2dph_A            2 GNKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRG---------RFIVPKGHVLGHEITGEV   72 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTT---------SSCCCTTCBCCCCEEEEE
T ss_pred             ccEEEEEEcCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcC---------CCCCCCCcccCCceEEEE
Confidence            58999999999999999999988 68     9999999999999999999884         233467999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCC--cc------ccCC--CCCCCcceEEEEecCC--ceEECC
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--MR------FFGS--PPTNGSLAHKVVHPAK--LCYKLP  155 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~--~~~~g~~~e~~~~~~~--~~~~~P  155 (366)
                      +++|++|++|++||||++.+..+|+.|.+|+.|++++|++  ..      .++.  ....|+|+||++++++  .++++|
T Consensus        73 ~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP  152 (398)
T 2dph_A           73 VEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFG  152 (398)
T ss_dssp             EEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECS
T ss_pred             EEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECC
Confidence            9999999999999999999999999999999999999987  21      2221  1357999999999987  899999


Q ss_pred             CCCCccc----cccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793          156 DNVSLEE----GAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD  230 (366)
Q Consensus       156 ~~~~~~~----aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  230 (366)
                      +++++++    |+.+. ++.|||++++++++++|++|||+|+|++|++++|+|+..|+.+|+++++++++.++++++|++
T Consensus       153 ~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~  232 (398)
T 2dph_A          153 DKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE  232 (398)
T ss_dssp             SHHHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE
T ss_pred             CCCChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc
Confidence            9999988    66664 899999999889999999999999999999999999999997899999999999999999996


Q ss_pred             eeeecCCCCcch-HHHHHHHHHhhCCCCcEEEEcCCChH--------------HHHHHHHhhcCCceEEEEcccC-----
Q 017793          231 ETAKVSTDIEDV-DTDVGKIQNAMGSGIDVSFDCVGFDK--------------TMSTALNATRPGGKVCLIGLAK-----  290 (366)
Q Consensus       231 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~-----  290 (366)
                       ++++..  .++ .+.++++.  .+.++|+|||++|+..              .++.++++|+++|+++.+|...     
T Consensus       233 -~i~~~~--~~~~~~~~~~~~--~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~  307 (398)
T 2dph_A          233 -TIDLRN--SAPLRDQIDQIL--GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPD  307 (398)
T ss_dssp             -EEETTS--SSCHHHHHHHHH--SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSS
T ss_pred             -EEcCCC--cchHHHHHHHHh--CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccc
Confidence             777643  454 66666554  2458999999999752              6889999999999999998652     


Q ss_pred             --------CCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC--CCCceEEEecCChhhHHHHHHHHHcCCCc
Q 017793          291 --------TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID--VKPLITHRFGFTQKEIEDAFEISAQGGNA  359 (366)
Q Consensus       291 --------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~--~~~~~~~~~~l~~~~~~~a~~~~~~~~~~  359 (366)
                              ....++...++.+++++.++... .+.++++++++++|++.  +.+.++++|+|  +++++|++.+.+++. 
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-  384 (398)
T 2dph_A          308 PVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITL--DQAPDGYAKFDKGSP-  384 (398)
T ss_dssp             CSSHHHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECS--TTHHHHHHHHHTTCS-
T ss_pred             cccccccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcH--HHHHHHHHHHhcCCc-
Confidence                    22244555677889999887654 56799999999999996  55678899999  999999999999877 


Q ss_pred             eEEEeeC
Q 017793          360 IKVMFNL  366 (366)
Q Consensus       360 gkvvi~~  366 (366)
                      ||+|+++
T Consensus       385 gKvvv~~  391 (398)
T 2dph_A          385 AKFVIDP  391 (398)
T ss_dssp             CEEEECT
T ss_pred             eEEEEec
Confidence            9999864

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=5.4e-55  Score=402.81  Aligned_cols=332  Identities=24%  Similarity=0.368  Sum_probs=267.1

Q ss_pred             ccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           13 NQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        13 ~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ++||++++.+++ +++++++|.|+|++|||+|||.++|||++|++++.|.+..      ....+|.++|||++|+|+++|
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~------~~~~~p~i~G~E~~G~V~~vG   75 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK------QGFRLPIILGHENAGTIVEVG   75 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCC------TTCCSSEECCCCEEEEEEEEC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcc------cCCCCCccccccceEEEEEEC
Confidence            368999998874 7999999999999999999999999999999998853110      023579999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEec-CCceEECCCCCCccccccch-hh
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAMCE-PL  169 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~-~~~~~~~P~~~~~~~aa~~~-~~  169 (366)
                      ++ ++|++||||+..+..+|++|.+|+.|++++|++...++. ..+|+|+||++++ ++.++++ +++++++||.+. .+
T Consensus        76 ~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~  152 (344)
T 2h6e_A           76 EL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAG  152 (344)
T ss_dssp             TT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTT-TBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHH
T ss_pred             CC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCcccccc-ccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhh
Confidence            99 999999999888888999999999999999998776664 4689999999999 9999999 999999998775 77


Q ss_pred             HHHHHHHHhC-----CCCCCCEEEEECCCHHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcch
Q 017793          170 SVGVHACRRA-----NVGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV  242 (366)
Q Consensus       170 ~~a~~~l~~~-----~~~~~~~vlI~G~g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~  242 (366)
                      .|||+++++.     ++ +|++|||+|+|++|++++|+|+..  |+ +|+++++++++.++++++|++.++++... +  
T Consensus       153 ~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~--  227 (344)
T 2h6e_A          153 TTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA-E--  227 (344)
T ss_dssp             HHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH-H--
T ss_pred             HHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc-h--
Confidence            8999999766     89 999999999999999999999999  99 79999999999999999999998875320 1  


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHH
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCI  321 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  321 (366)
                       ..+.++..  +.++|+|||++|++..++.++++|+++|+++.+|.......++...++.+++++.+++.. .+++++++
T Consensus       228 -~~~~~~~~--g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  304 (344)
T 2h6e_A          228 -SLINKLTD--GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVV  304 (344)
T ss_dssp             -HHHHHHHT--TCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHH
T ss_pred             -HHHHHhhc--CCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHH
Confidence             22333332  458999999999887899999999999999999976554455666677899999998765 56799999


Q ss_pred             HHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          322 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       322 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++|++  ++.+ ++|+|  +++++|++.+++++..||+|+++
T Consensus       305 ~l~~~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          305 RLSESGKI--KPYI-IKVPL--DDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             HHHHTTSS--CCCE-EEECC------------------CEEEECC
T ss_pred             HHHHcCCC--Ccce-EEEeH--HHHHHHHHHHHcCCCceEEEEeC
Confidence            99999999  5667 89999  99999999999988889999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-54  Score=397.11  Aligned_cols=338  Identities=20%  Similarity=0.324  Sum_probs=292.9

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      +|++||++++.+++ +++++++|.|+|++|||+|||.++|||++|++++.|.+.       ....+|.++|||++|+|++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~~~p~v~G~E~~G~V~~   74 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP-------LPVKLPLVGGHEGAGVVVG   74 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-------SCCCSSEECCCEEEEEEEE
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCC-------CCCCCCcccCccceEEEEE
Confidence            57789999999885 899999999999999999999999999999999885321       1235799999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-
Q 017793           90 VGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-  167 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-  167 (366)
                      +|++|++|++||||++.+.. +|+.|.+|+.|++++|++..+.+. ..+|+|+||++++++.++++|+++++++||.+. 
T Consensus        75 vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  153 (347)
T 2hcy_A           75 MGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQYATADAVQAAHIPQGTDLAQVAPILC  153 (347)
T ss_dssp             ECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTT-TBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGT
T ss_pred             ECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCcccccccc-CCCCcceeEEEeccccEEECCCCCCHHHHHHHhh
Confidence            99999999999999987654 599999999999999998876663 468999999999999999999999999998776 


Q ss_pred             hhHHHHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHH
Q 017793          168 PLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       168 ~~~~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  246 (366)
                      .+.|||+++++.++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++++.. .+++.+.+
T Consensus       154 ~~~ta~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~~~~  231 (347)
T 2hcy_A          154 AGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTK-EKDIVGAV  231 (347)
T ss_dssp             HHHHHHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTT-CSCHHHHH
T ss_pred             hHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCc-cHhHHHHH
Confidence            7788999998889999999999995 8999999999999999 7889988999999999999998887642 35666666


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-CCChHHHHHHH
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFL  324 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  324 (366)
                      +++..  + ++|++||++|....++.++++|+++|+++.+|.... ...++...++.+++++.+++.. ..+++++++++
T Consensus       232 ~~~~~--~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~  308 (347)
T 2hcy_A          232 LKATD--G-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFF  308 (347)
T ss_dssp             HHHHT--S-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHH
T ss_pred             HHHhC--C-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHH
Confidence            65542  3 899999999987789999999999999999987653 3345556677899999998765 46789999999


Q ss_pred             HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++|++.+  . +++|+|  +++++|++.+++++..||+|+++
T Consensus       309 ~~g~l~~--~-~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          309 ARGLVKS--P-IKVVGL--STLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             HTTSCCC--C-EEEEEG--GGHHHHHHHHHTTCCSSEEEEES
T ss_pred             HhCCCcc--c-eEEEcH--HHHHHHHHHHHcCCcceeEEEec
Confidence            9999943  3 478999  99999999999998889999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=4e-54  Score=396.83  Aligned_cols=334  Identities=27%  Similarity=0.450  Sum_probs=290.2

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.+++   .++++++|.|+|++|||+|||.++|||++|++++.|.+.       ....+|.++|||++|+|+++|
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~~~p~v~G~E~~G~V~~vG   73 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS-------PKLPLPHVLGADGSGVVDAVG   73 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSS-------TTCCSSEECCSEEEEEEEEEC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCC-------CCCCCCcccccceEEEEEEEC
Confidence            6888888664   389999999999999999999999999999999884310       113579999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc-hhhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~-~~~~  170 (366)
                      +++++|++||||++.+..+|+.|.+|+.|++++|++..+++. ..+|+|+||++++++.++++|+++++++|+.+ .++.
T Consensus        74 ~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  152 (343)
T 2eih_A           74 PGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFL  152 (343)
T ss_dssp             SSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred             CCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCc-CCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHH
Confidence            999999999999999999999999999999999999887664 35799999999999999999999999999955 4899


Q ss_pred             HHHHHHHh-CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      |||+++.+ +++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++++..  +++.+.+.+
T Consensus       153 ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~~~~  229 (343)
T 2eih_A          153 TAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRR  229 (343)
T ss_dssp             HHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTS--TTHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHH
Confidence            99999976 68999999999995 9999999999999999 7999999999999999999998887643  456555554


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS  326 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  326 (366)
                      +.  .+.++|++||++| ...++.++++|+++|+++.+|..... ..++...++.+++++.++... .++++++++++++
T Consensus       230 ~~--~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~  306 (343)
T 2eih_A          230 LT--GGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEE  306 (343)
T ss_dssp             HT--TTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHH
T ss_pred             Hh--CCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHc
Confidence            43  2458999999999 55889999999999999999876543 235566677899999998754 6779999999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      |++  ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       307 g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          307 GKL--KPVVGQVLPL--EAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             TSS--CCCEEEEEEG--GGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             CCC--CCceeEEeeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            998  6788899999  99999999999998889999874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-54  Score=407.74  Aligned_cols=338  Identities=24%  Similarity=0.401  Sum_probs=284.3

Q ss_pred             ccceEEEEeeCCceEEEEecCCCCC-CCc------EEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeE
Q 017793           13 NQNMAAWLLGIKTLKIQPYHLPTLG-PQD------VKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG   85 (366)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~p~~~-~~e------vlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G   85 (366)
                      ++||++++.+++.++++++|.|+|+ ++|      |+|||.++|||++|+++++|.         ....+|.++|||++|
T Consensus         1 ~~Mka~~~~~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~---------~~~~~p~v~GhE~~G   71 (398)
T 1kol_A            1 SGNRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGR---------TTAQVGLVLGHEITG   71 (398)
T ss_dssp             -CEEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTC---------SCCCTTCBCCCCEEE
T ss_pred             CccEEEEEecCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCC---------CCCCCCcccCcccEE
Confidence            3689999999889999999999997 898      999999999999999998842         234578999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------ccCC---CCCCCcceEEEEecCC--ceEEC
Q 017793           86 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------FFGS---PPTNGSLAHKVVHPAK--LCYKL  154 (366)
Q Consensus        86 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~g~~~e~~~~~~~--~~~~~  154 (366)
                      +|+++|++|++|++||||++.+..+|+.|.+|+.|++++|++..      .++.   ....|+|+||++++++  .++++
T Consensus        72 ~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~  151 (398)
T 1kol_A           72 EVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKL  151 (398)
T ss_dssp             EEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEEC
T ss_pred             EEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEEC
Confidence            99999999999999999999888899999999999999999763      2222   1357999999999987  89999


Q ss_pred             CCCCCccc----cccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793          155 PDNVSLEE----GAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  229 (366)
Q Consensus       155 P~~~~~~~----aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  229 (366)
                      |+++++++    ++.+. ++.|||++++++++++|++|||+|+|++|++++|+||.+|+.+|++++++++|.++++++|+
T Consensus       152 P~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa  231 (398)
T 1kol_A          152 PDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF  231 (398)
T ss_dssp             SCHHHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC
T ss_pred             CCCcchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC
Confidence            99999887    55554 78999999988999999999999999999999999999999789999999999999999999


Q ss_pred             ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh---------------HHHHHHHHhhcCCceEEEEccc-CC--
Q 017793          230 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------KTMSTALNATRPGGKVCLIGLA-KT--  291 (366)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~-~~--  291 (366)
                      + ++++.. ..++.+.++++.  .+.++|+|||++|+.               ..++.++++|+++|+++.+|.. ..  
T Consensus       232 ~-~i~~~~-~~~~~~~v~~~t--~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~  307 (398)
T 1kol_A          232 E-IADLSL-DTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDP  307 (398)
T ss_dssp             E-EEETTS-SSCHHHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCT
T ss_pred             c-EEccCC-cchHHHHHHHHh--CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcc
Confidence            7 677643 233666666554  356899999999975               3788999999999999999865 11  


Q ss_pred             ----------CceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC-CCCceEEEecCChhhHHHHHHHHHcCCCc
Q 017793          292 ----------EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID-VKPLITHRFGFTQKEIEDAFEISAQGGNA  359 (366)
Q Consensus       292 ----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~-~~~~~~~~~~l~~~~~~~a~~~~~~~~~~  359 (366)
                                ...++...++.+++++.++... .+.++++++++.+|++. ..+.++++|+|  +++++|++.+.+++. 
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-  384 (398)
T 1kol_A          308 GAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISL--DDAPRGYGEFDAGVP-  384 (398)
T ss_dssp             TCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECG--GGHHHHHHHHHHTCS-
T ss_pred             cccccccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcH--HHHHHHHHHHhCCCc-
Confidence                      1233444567788888876543 45678899999999995 23567899999  999999999999877 


Q ss_pred             eEEEeeC
Q 017793          360 IKVMFNL  366 (366)
Q Consensus       360 gkvvi~~  366 (366)
                      ||+|+++
T Consensus       385 gKvvi~~  391 (398)
T 1kol_A          385 KKFVIDP  391 (398)
T ss_dssp             CEEEECT
T ss_pred             eEEEEEe
Confidence            9999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=6.1e-55  Score=404.77  Aligned_cols=333  Identities=21%  Similarity=0.307  Sum_probs=285.5

Q ss_pred             CcccceEEEEeeCC-ceEEEE--ecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793           11 DKNQNMAAWLLGIK-TLKIQP--YHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus        11 ~~~~~~~~~~~~~~-~~~~~~--~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      +|++||++++.+++ ++++++  +|.|+|++|||+|||.++|||++|++++.|..        ....+|.++|||++|+|
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~p~v~GhE~~G~V   74 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW--------GNMKMPLVVGHEIVGKV   74 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTT--------SCCCSSEECCCCEEEEE
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCC--------CCCCCCcccCcCceEEE
Confidence            56789999998874 789999  99999999999999999999999999988431        11356999999999999


Q ss_pred             EEeCCCCC-CCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCc-cccC-----CCCCCCcceEEEEecCCceEECCCCCC
Q 017793           88 EEVGSEVK-SLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEM-RFFG-----SPPTNGSLAHKVVHPAKLCYKLPDNVS  159 (366)
Q Consensus        88 ~~vG~~v~-~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~g~~~e~~~~~~~~~~~~P~~~~  159 (366)
                      +++|++|+ +|++||||++.+ ..+|++|.+|+.|++++|++. ..++     +....|+|+||++++++.++++|++++
T Consensus        75 ~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~  154 (360)
T 1piw_A           75 VKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP  154 (360)
T ss_dssp             EEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSC
T ss_pred             EEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCC
Confidence            99999999 999999997654 468999999999999999976 2331     123579999999999999999999999


Q ss_pred             ccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793          160 LEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD  238 (366)
Q Consensus       160 ~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  238 (366)
                      +++||.+. .+.|||++++++++++|++|||+|+|++|++++|+|+..|+ +|+++++++++.++++++|++.++++...
T Consensus       155 ~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~  233 (360)
T 1piw_A          155 SHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEE  233 (360)
T ss_dssp             HHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGT
T ss_pred             HHHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCc
Confidence            99998776 78899999988999999999999999999999999999999 69999999999999999999999886432


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCC--hHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeecc-C
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGF--DKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-R  314 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~  314 (366)
                       .++.+.   +    .+++|+|||++|+  +..++.++++|+++|+++.+|.... . .++...++.+++++.+++.. .
T Consensus       234 -~~~~~~---~----~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~  304 (360)
T 1piw_A          234 -GDWGEK---Y----FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSI  304 (360)
T ss_dssp             -SCHHHH---S----CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCH
T ss_pred             -hHHHHH---h----hcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCH
Confidence             133322   2    2589999999998  5678889999999999999987655 3 45566677889999998765 4


Q ss_pred             CChHHHHHHHHCCCCCCCCceEEEecCChhh--HHHHHHHHHcCCCceEEEeeC
Q 017793          315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKE--IEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       315 ~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~--~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++++++++++|++  ++.+ ++|+|  ++  +++|++.+++++..||+|+++
T Consensus       305 ~~~~~~~~l~~~g~l--~~~i-~~~~l--~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          305 KELNQLLKLVSEKDI--KIWV-ETLPV--GEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             HHHHHHHHHHHHTTC--CCCE-EEEES--SHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHhCCC--cceE-EEEec--cHhHHHHHHHHHHCCCCceEEEEec
Confidence            679999999999999  5556 89999  89  999999999998889999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.7e-54  Score=407.52  Aligned_cols=341  Identities=25%  Similarity=0.426  Sum_probs=290.9

Q ss_pred             cccceEEEEeeCCceEEEEecCCC-CCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           12 KNQNMAAWLLGIKTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~p~-~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      +.+|+++++..++.++++++|.|+ |++|||||||.++|||++|++++.|....... ......+|.++|||++|+|+++
T Consensus        28 ~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~-~~~~~~~P~i~G~E~~G~V~~v  106 (404)
T 3ip1_A           28 KLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYIL-YPGLTGFPVTLGHEFSGVVVEA  106 (404)
T ss_dssp             TBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBS-CCSCBCSSEECCCEEEEEEEEE
T ss_pred             hhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCcccc-ccccCCCCcccCccceEEEEEE
Confidence            355666666666689999999999 99999999999999999999998753211100 1112467999999999999999


Q ss_pred             CCCC------CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCc----
Q 017793           91 GSEV------KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSL----  160 (366)
Q Consensus        91 G~~v------~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~----  160 (366)
                      |++|      ++|++||||++.+..+|+.|.+|+.|++++|++...++. ..+|+|+||++++++.++++|++++.    
T Consensus       107 G~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~~~  185 (404)
T 3ip1_A          107 GPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYAWSLRELEGVYEGD  185 (404)
T ss_dssp             CTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEECGGGBTTBCTH
T ss_pred             CCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCC-CCCCCCcceEEechHHeEeccccccccccc
Confidence            9999      889999999999999999999999999999999888775 56899999999999999999998863    


Q ss_pred             --cccccc-hhhHHHHHHHH-h-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec
Q 017793          161 --EEGAMC-EPLSVGVHACR-R-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  235 (366)
Q Consensus       161 --~~aa~~-~~~~~a~~~l~-~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  235 (366)
                        .+++++ .++++||+++. . +++++|++|||+|+|++|++++|+|+..|+.+|++++++++|.++++++|++.++++
T Consensus       186 ~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  265 (404)
T 3ip1_A          186 RLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP  265 (404)
T ss_dssp             HHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT
T ss_pred             cchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcC
Confidence              335544 58899999984 3 589999999999999999999999999999889999999999999999999999886


Q ss_pred             CCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhh----cCCceEEEEcccCCCceeechHhhhcCcEEEEe
Q 017793          236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNAT----RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI  310 (366)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  310 (366)
                      ..  +++.+.++++.  .+.++|+||||+|++ ..+..+.++|    +++|+++.+|.......++...+..+++++.++
T Consensus       266 ~~--~~~~~~i~~~t--~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~  341 (404)
T 3ip1_A          266 TK--ENFVEAVLDYT--NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGS  341 (404)
T ss_dssp             TT--SCHHHHHHHHT--TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEEC
T ss_pred             CC--CCHHHHHHHHh--CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEe
Confidence            43  57777776654  366899999999987 3667777777    999999999988777777888889999999998


Q ss_pred             ecc--CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          311 FRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       311 ~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +..  ...++++++++++| +.+.+.++++|+|  +++++|++.+..    ||+|++
T Consensus       342 ~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l--~~~~~A~~~~~~----GKvvl~  391 (404)
T 3ip1_A          342 QGHSGHGTFPRVISLMASG-MDMTKIISKTVSM--EEIPEYIKRLQT----DKSLVK  391 (404)
T ss_dssp             CCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECG--GGHHHHHHHTTT----CTTCSC
T ss_pred             cCCCchHHHHHHHHHHHcC-CChhheEEEEeeH--HHHHHHHHHHhC----CcEEEe
Confidence            854  67899999999999 8778889999999  999999999873    566654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.6e-53  Score=393.43  Aligned_cols=340  Identities=28%  Similarity=0.415  Sum_probs=291.1

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.+++ +++++++|.|+|++|||+|||.++|||++|++++.|..............+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            6888888874 799999999999999999999999999999999885321100000012357999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecC-CceEECCCCCCccccccch-hhHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLPDNVSLEEGAMCE-PLSV  171 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~-~~~~~~P~~~~~~~aa~~~-~~~~  171 (366)
                      +++|++||||+..+..+|++|.+|+.|++++|++...++. ...|+|+||+++++ +.++++ +++++++|+.+. .+.|
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~t  158 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGIT  158 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccc-cCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHH
Confidence            9999999999888888999999999999999999877664 46799999999999 999999 999999998775 6788


Q ss_pred             HHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          172 GVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ||+++++.++++|++|||+|+ |++|++++|+++.. |+ +|+++++++++.++++++|++.++++..  .++.+.+.++
T Consensus       159 a~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~  235 (347)
T 1jvb_A          159 TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRI  235 (347)
T ss_dssp             HHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCC--ccHHHHHHHH
Confidence            999998899999999999996 49999999999999 99 7999999999999999999998887643  4555555544


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG  327 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  327 (366)
                      ..  .+++|++||++|+...++.++++|+++|+++.+|... .. .++...++.+++++.+++.. .++++++++++++|
T Consensus       236 ~~--~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  312 (347)
T 1jvb_A          236 TE--SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAG  312 (347)
T ss_dssp             TT--TSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             hc--CCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcC
Confidence            21  1589999999998878899999999999999998765 44 55556677889999998765 56799999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       328 ~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++  ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       313 ~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          313 KV--KPMITKTMKL--EEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             SS--CCCCEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CC--CceEEEEEcH--HHHHHHHHHHHCCCCcceEEecC
Confidence            98  6778899999  99999999999998889999974

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=5e-55  Score=404.87  Aligned_cols=327  Identities=19%  Similarity=0.286  Sum_probs=283.5

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCC---CcccccceeEEEEEe
Q 017793           15 NMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK---PMVIGHECAGIIEEV   90 (366)
Q Consensus        15 ~~~~~~~~~~~-~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~---p~i~G~e~~G~V~~v   90 (366)
                      ||++++.+++. ++++++|.|+|++|||||||+++|||++|+++++|.+        ....+   |.++|||++| |+++
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~~~~p~v~G~E~~G-V~~v   71 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGH--------GGFPEGEDHLVLGHEAVG-VVVD   71 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCS--------TTSCTTCSEEECCSEEEE-EEEE
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCC--------CCCCCCCCCcccCceeEE-EEEE
Confidence            68899988866 9999999999999999999999999999999998431        01245   8999999999 9999


Q ss_pred             CCCCCCCCCCCEEEEcCCcC--CCCCccccCCCCCCCCCcccc--CCCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793           91 GSEVKSLEVGDRVALEPGIS--CGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~  166 (366)
                      |++ ++|++||||++.+..+  |++|.+|+.|++++|++..++  +....+|+|+||++++++.++++|++++ ++|+..
T Consensus        72 G~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~aal~  149 (357)
T 2b5w_A           72 PND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLI  149 (357)
T ss_dssp             CTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTGGGH
T ss_pred             CCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhhhhh
Confidence            999 9999999999988777  999999999999999998766  4323579999999999999999999999 777766


Q ss_pred             hhhHHHHHHHHhCCCCCC------CEEEEECCCHHHHHH-HHHH-HHCCCCeEEEEcCChh---HHHHHHHcCCceeeec
Q 017793          167 EPLSVGVHACRRANVGPE------TNVMIMGSGPIGLVT-LLAA-RAFGAPRIIITDVDVQ---RLSIARNLGADETAKV  235 (366)
Q Consensus       167 ~~~~~a~~~l~~~~~~~~------~~vlI~G~g~vG~~a-i~la-~~~g~~~vv~v~~~~~---~~~~~~~lg~~~~~~~  235 (366)
                      .+++|||++++++++++|      ++|||+|+|++|+++ +|+| +.+|+++|++++++++   +.++++++|++.+ ++
T Consensus       150 ~~~~ta~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~  228 (357)
T 2b5w_A          150 EPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DS  228 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ET
T ss_pred             chHHHHHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CC
Confidence            689999999987889999      999999999999999 9999 9999966999999998   9999999999988 76


Q ss_pred             CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCceeechHh----hhcCcEEEEe
Q 017793          236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPA----AAREVDVIGI  310 (366)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~~~~~  310 (366)
                      ..  +++.+ ++++   .+ ++|+|||++|+...++.++++|+++|+++.+|... ....++...+    +.+++++.++
T Consensus       229 ~~--~~~~~-i~~~---~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~  301 (357)
T 2b5w_A          229 RQ--TPVED-VPDV---YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGS  301 (357)
T ss_dssp             TT--SCGGG-HHHH---SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEEC
T ss_pred             Cc--cCHHH-HHHh---CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEe
Confidence            43  46666 6555   24 89999999998878899999999999999999765 4444555556    7899999998


Q ss_pred             ecc-CCChHHHHHHHHCC--CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          311 FRY-RSTWPLCIEFLRSG--KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       311 ~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.. .++++++++++++|  ++ +.+.++++|+|  +++++|++.+   ...||+|+++
T Consensus       302 ~~~~~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l--~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          302 VNSHVEHFEAATVTFTKLPKWF-LEDLVTGVHPL--SEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             CCCCHHHHHHHHHHHHHSCHHH-HHHHEEEEEEG--GGGGGGGCCS---TTCCEEEEEC
T ss_pred             ccCCHHHHHHHHHHHHhCchhh-hhhhcceeecH--HHHHHHHHHh---CCCceEEEEe
Confidence            765 56799999999999  85 57888899999  9999999988   3578999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-53  Score=396.94  Aligned_cols=332  Identities=21%  Similarity=0.296  Sum_probs=278.2

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        12 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      .++|++.+..++ +.++++++|.|+|++|||+|||.++|||++|++++.|..        ....+|.++|||++|+|+++
T Consensus        20 ~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~P~v~GhE~~G~V~~v   91 (369)
T 1uuf_A           20 GLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW--------AGTVYPCVPGHEIVGRVVAV   91 (369)
T ss_dssp             ---CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTT--------SCCCSSBCCCCCEEEEEEEE
T ss_pred             CceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCC--------CCCCCCeecccCceEEEEEE
Confidence            356788777666 789999999999999999999999999999999988421        11347899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCcc--ccC-----CCCCCCcceEEEEecCCceEECCCC-CCcc
Q 017793           91 GSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMR--FFG-----SPPTNGSLAHKVVHPAKLCYKLPDN-VSLE  161 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~e~~~~~~~~~~~~P~~-~~~~  161 (366)
                      |++|++|++||||++.+.. .|++|.+|+.|++++|++..  +.+     +....|+|+||++++++.++++|++ ++++
T Consensus        92 G~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~  171 (369)
T 1uuf_A           92 GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLA  171 (369)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHH
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHH
Confidence            9999999999999987764 69999999999999999862  211     1135799999999999999999999 9999


Q ss_pred             ccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCc
Q 017793          162 EGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE  240 (366)
Q Consensus       162 ~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~  240 (366)
                      +||.+. .+.|||+++++.++++|++|||+|+|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .
T Consensus       172 ~aa~l~~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~  248 (369)
T 1uuf_A          172 AVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN--A  248 (369)
T ss_dssp             HHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC--H
T ss_pred             HhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEecccc--H
Confidence            998775 78899999988899999999999999999999999999999 6999999999999999999999888643  2


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeecc-CCChH
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWP  318 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~  318 (366)
                      ++   ++++    ..++|+|||++|++..++.++++|+++|+++.+|...... .++...++.+++++.+++.. .++++
T Consensus       249 ~~---~~~~----~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  321 (369)
T 1uuf_A          249 DE---MAAH----LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQ  321 (369)
T ss_dssp             HH---HHTT----TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHH
T ss_pred             HH---HHHh----hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHH
Confidence            22   2222    2589999999998767889999999999999998765433 45555677899999998765 46789


Q ss_pred             HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++++++|++  ++.+ +.|+|  +++++|++.+.+++..||+|+++
T Consensus       322 ~~~~l~~~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          322 EMLDFCAEHGI--VADI-EMIRA--DQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             HHHHHHHHHTC--CCCE-EEECG--GGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             HHHHHHHhCCC--Ccce-EEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            99999999998  4444 57888  99999999999998889999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=2.6e-53  Score=393.19  Aligned_cols=331  Identities=24%  Similarity=0.356  Sum_probs=280.1

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        12 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      +++|++....++ +.++++++|.|+|++|||+|||.++|||++|++++.|..        ....+|.++|||++|+|+++
T Consensus         7 ~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~P~v~GhE~~G~V~~v   78 (357)
T 2cf5_A            7 ERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDL--------GMSNYPMVPGHEVVGEVVEV   78 (357)
T ss_dssp             CCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTT--------TCCCSSBCCCCEEEEEEEEE
T ss_pred             cceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCC--------CCCCCCeecCcceeEEEEEE
Confidence            456777777765 789999999999999999999999999999999988421        11357999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCCcccc
Q 017793           91 GSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG  163 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~a  163 (366)
                      |++|++|++||||++.+. .+|++|.+|+.+++++|+...+..      +...+|+|+||++++++.++++|+++++++|
T Consensus        79 G~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~a  158 (357)
T 2cf5_A           79 GSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQA  158 (357)
T ss_dssp             CSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHH
T ss_pred             CCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHh
Confidence            999999999999987654 589999999999999997654321      1235799999999999999999999999999


Q ss_pred             ccch-hhHHHHHHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCc
Q 017793          164 AMCE-PLSVGVHACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIE  240 (366)
Q Consensus       164 a~~~-~~~~a~~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~  240 (366)
                      |.++ .+.|||+++++.+++ +|++|||+|+|++|++++|+|+..|+ +|+++++++++.++++ ++|++.++++..   
T Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~---  234 (357)
T 2cf5_A          159 APLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSD---  234 (357)
T ss_dssp             TGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTC---
T ss_pred             hhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecccc---
Confidence            8776 778999999888888 99999999999999999999999999 7999999999998888 999999888642   


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce-eechHhhhcCcEEEEeecc-CCChH
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWP  318 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~  318 (366)
                        .+.++++    .+++|+|||++|++..++.++++++++|+++.+|....... ++.. ++.+++++.+++.+ .++++
T Consensus       235 --~~~~~~~----~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~  307 (357)
T 2cf5_A          235 --QAKMSEL----ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETE  307 (357)
T ss_dssp             --HHHHHHS----TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHH
T ss_pred             --HHHHHHh----cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHH
Confidence              1233333    24899999999987678899999999999999987654333 4444 77889999998765 46789


Q ss_pred             HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++++++|++.  +.+ ++|+|  +++++|++.+++++..||+|+++
T Consensus       308 ~~~~l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          308 EMLEFCKEKGLS--SII-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             HHHHHHHHTTCC--CCE-EEEEG--GGHHHHHHHHHTTCSSSEEEEET
T ss_pred             HHHHHHHcCCCC--Cce-EEEeH--HHHHHHHHHHHCCCCceEEEEeC
Confidence            999999999994  444 78999  99999999999998899999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=1.7e-52  Score=399.81  Aligned_cols=348  Identities=22%  Similarity=0.213  Sum_probs=291.6

Q ss_pred             CCcccceEEEEeeC----------------CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccc----ccc
Q 017793           10 GDKNQNMAAWLLGI----------------KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM----RCA   69 (366)
Q Consensus        10 ~~~~~~~~~~~~~~----------------~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~----~~~   69 (366)
                      .+|++||++++.++                +.++++++|.|+|++|||||||.++|||++|++...+.+....    ..+
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g  105 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG  105 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence            46789999999975                5799999999999999999999999999999977543211100    000


Q ss_pred             -----CccCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEE
Q 017793           70 -----NFIVKKP-MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK  143 (366)
Q Consensus        70 -----~~~~~~p-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~  143 (366)
                           .....+| .++|||++|+|+++|++|++|++||||++.+. .|+.|..|..++++.|++..+++....+|+|+||
T Consensus       106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey  184 (456)
T 3krt_A          106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNFGGLAEI  184 (456)
T ss_dssp             TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSE
T ss_pred             ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccccccCCCCCcccce
Confidence                 0012456 69999999999999999999999999998654 6788888989999999999999876667999999


Q ss_pred             EEecCCceEECCCCCCccccccch-hhHHHHHHHHh---CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          144 VVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR---ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       144 ~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~---~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ++++++.++++|+++++++||+++ ++.|||+++..   +++++|++|||+|+ |++|++++|+|+..|+ +++++++++
T Consensus       185 ~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~  263 (456)
T 3krt_A          185 ALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSP  263 (456)
T ss_dssp             EEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             EEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCH
Confidence            999999999999999999999886 78899999843   78999999999995 9999999999999999 677777899


Q ss_pred             hHHHHHHHcCCceeeecCCCCc---------------chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceE
Q 017793          219 QRLSIARNLGADETAKVSTDIE---------------DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV  283 (366)
Q Consensus       219 ~~~~~~~~lg~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~  283 (366)
                      +|.++++++|++.++++...+.               .+.+.++++.  .+.++|+||||+|+ ..+..++++|+++|++
T Consensus       264 ~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t--~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~i  340 (456)
T 3krt_A          264 QKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELT--GGEDIDIVFEHPGR-ETFGASVFVTRKGGTI  340 (456)
T ss_dssp             HHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHH--TSCCEEEEEECSCH-HHHHHHHHHEEEEEEE
T ss_pred             HHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHh--CCCCCcEEEEcCCc-hhHHHHHHHhhCCcEE
Confidence            9999999999999988754321               1224444443  35799999999997 6899999999999999


Q ss_pred             EEEcccCC-CceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceE
Q 017793          284 CLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIK  361 (366)
Q Consensus       284 v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gk  361 (366)
                      +.+|.... ...++...+..+..++.+++.. ..++.++++++++|++  ++.++++|+|  +++++|++.+.+++..||
T Consensus       341 v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~eA~~~l~~~~~~GK  416 (456)
T 3krt_A          341 TTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRI--HPTLSKVYSL--EDTGQAAYDVHRNLHQGK  416 (456)
T ss_dssp             EESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCSSSE
T ss_pred             EEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHHhCCCCCc
Confidence            99997654 3456666778888999998765 4567789999999999  6788899999  999999999999999999


Q ss_pred             EEeeC
Q 017793          362 VMFNL  366 (366)
Q Consensus       362 vvi~~  366 (366)
                      +||.+
T Consensus       417 vvv~~  421 (456)
T 3krt_A          417 VGVLC  421 (456)
T ss_dssp             EEEES
T ss_pred             EEEEe
Confidence            99863

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2.9e-52  Score=387.28  Aligned_cols=331  Identities=22%  Similarity=0.300  Sum_probs=277.6

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        12 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      ++++++....++ +.++++++|.|+|++|||+|||.++|||++|++++.|.+        ....+|.++|||++|+|+++
T Consensus        14 ~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~P~v~GhE~~G~V~~v   85 (366)
T 1yqd_A           14 PVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDW--------GFSMYPLVPGHEIVGEVTEV   85 (366)
T ss_dssp             SEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSS--------SCCCSSBCCCCCEEEEEEEE
T ss_pred             CeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCC--------CCCCCCEecccceEEEEEEE
Confidence            334444444443 689999999999999999999999999999999988421        11357899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCCcccc
Q 017793           91 GSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG  163 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~a  163 (366)
                      |++|++|++||||++.+. .+|++|.+|+.|++++|+...+..      +...+|+|+||++++++.++++|+++++++|
T Consensus        86 G~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~a  165 (366)
T 1yqd_A           86 GSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGG  165 (366)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTT
T ss_pred             CCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHh
Confidence            999999999999998654 589999999999999997653221      1235799999999999999999999999999


Q ss_pred             ccch-hhHHHHHHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCc
Q 017793          164 AMCE-PLSVGVHACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIE  240 (366)
Q Consensus       164 a~~~-~~~~a~~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~  240 (366)
                      |.+. .+.|||+++++.+++ +|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++..   
T Consensus       166 a~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~---  241 (366)
T 1yqd_A          166 APLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRD---  241 (366)
T ss_dssp             GGGGTHHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTC---
T ss_pred             hhhhhhHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccC---
Confidence            8776 778999999888888 99999999999999999999999999 7899989999988877 899999888642   


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHH
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPL  319 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  319 (366)
                        .+.+.++    .+++|+|||++|....++.++++|+++|+++.+|.......++...++.+++++.+++.+ .+++++
T Consensus       242 --~~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  315 (366)
T 1yqd_A          242 --QEQMQAA----AGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQE  315 (366)
T ss_dssp             --HHHHHHT----TTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHH
T ss_pred             --HHHHHHh----hCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHH
Confidence              1233333    248999999999765678999999999999999976654456666678899999998765 457899


Q ss_pred             HHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793          320 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  365 (366)
Q Consensus       320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~  365 (366)
                      +++++++|++.  +.+ ++|+|  +++++|++.+++++..||+|++
T Consensus       316 ~~~l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvl~  356 (366)
T 1yqd_A          316 MIDFAAKHNIT--ADI-EVIST--DYLNTAMERLAKNDVRYRFVID  356 (366)
T ss_dssp             HHHHHHHTTCC--CCE-EEECG--GGHHHHHHHHHTTCCSSEEEEC
T ss_pred             HHHHHHcCCCC--Cce-EEEcH--HHHHHHHHHHHcCCcceEEEEE
Confidence            99999999994  444 68999  9999999999999889999986

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=5.7e-52  Score=395.66  Aligned_cols=351  Identities=19%  Similarity=0.225  Sum_probs=288.6

Q ss_pred             cCCcccceEEEEeeCC--------------ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccc-------ccc
Q 017793            9 EGDKNQNMAAWLLGIK--------------TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLS-------TMR   67 (366)
Q Consensus         9 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~-------~~~   67 (366)
                      ..+|++||++++.+++              .++++++|.|+|++|||+|||.++|||++|++........       ...
T Consensus        19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~   98 (447)
T 4a0s_A           19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR   98 (447)
T ss_dssp             SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred             cCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence            3578999999999876              8999999999999999999999999999998654311000       000


Q ss_pred             ccCc--cCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEE
Q 017793           68 CANF--IVKKP-MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV  144 (366)
Q Consensus        68 ~~~~--~~~~p-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~  144 (366)
                      .+..  ...+| .++|||++|+|+++|++|++|++||||++.+...|+.|.. ..++++.|++..+++.....|+|+||+
T Consensus        99 ~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~-~~~~~~~c~~~~~~G~~~~~G~~aey~  177 (447)
T 4a0s_A           99 QGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPA-THGDGMLGTEQRAWGFETNFGGLAEYG  177 (447)
T ss_dssp             TCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGG-GGTCTTCSTTCEETTTTSSSCSSBSEE
T ss_pred             cCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccc-cccccccccccccccccCCCCceeeee
Confidence            0111  12456 7999999999999999999999999999998888877764 457899999999888766679999999


Q ss_pred             EecCCceEECCCCCCccccccch-hhHHHHHHHH---hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          145 VHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR---RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       145 ~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~---~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      +++++.++++|+++++++||.++ ++.+||+++.   .+++++|++|||+|+ |++|++++|+|+..|+ ++++++++++
T Consensus       178 ~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~  256 (447)
T 4a0s_A          178 VVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQ  256 (447)
T ss_dssp             EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHH
T ss_pred             ecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            99999999999999999999875 7789999983   488999999999995 9999999999999999 6777779999


Q ss_pred             HHHHHHHcCCceeeecCCCCc-------------chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          220 RLSIARNLGADETAKVSTDIE-------------DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       220 ~~~~~~~lg~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +.++++++|++.++++....-             ++......+.+..+.++|++||++|.. .++.++++++++|+++.+
T Consensus       257 ~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv~~  335 (447)
T 4a0s_A          257 KEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TFGLSVIVARRGGTVVTC  335 (447)
T ss_dssp             HHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HHHHHHHHSCTTCEEEES
T ss_pred             HHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch-HHHHHHHHHhcCCEEEEE
Confidence            999999999998887632110             000112223333367899999999974 789999999999999999


Q ss_pred             cccCC-CceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793          287 GLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       287 g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      |.... ...++...+..+..++.+++.. ..+++++++++++|++  ++.++++|+|  +++++|++.+.+++..||+||
T Consensus       336 G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~GKvvv  411 (447)
T 4a0s_A          336 GSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAV--VPAMSAVYPL--AEAAEACRVVQTSRQVGKVAV  411 (447)
T ss_dssp             CCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEE
T ss_pred             ecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHhcCCCceEEEE
Confidence            97654 3455666778889999998766 4568899999999999  6788899999  999999999999999999988


Q ss_pred             eC
Q 017793          365 NL  366 (366)
Q Consensus       365 ~~  366 (366)
                      .+
T Consensus       412 ~~  413 (447)
T 4a0s_A          412 LC  413 (447)
T ss_dssp             ES
T ss_pred             Ee
Confidence            63

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=3.7e-51  Score=378.25  Aligned_cols=317  Identities=22%  Similarity=0.308  Sum_probs=273.1

Q ss_pred             ccccccCCcccceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccc
Q 017793            4 AIRDDEGDKNQNMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIG   80 (366)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G   80 (366)
                      .|.+...||++||++++.+   ++.++++++|.|+|++|||+|||.++|||++|++++.|.+.       .+..+|.++|
T Consensus        18 ~~~~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~~~p~i~G   90 (353)
T 4dup_A           18 LYFQSMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYP-------PPKDASPILG   90 (353)
T ss_dssp             -----CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSC-------CCTTSCSSSC
T ss_pred             eeeecCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC-------CCCCCCCccc
Confidence            3455556889999999996   45699999999999999999999999999999999885321       1234689999


Q ss_pred             cceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCc
Q 017793           81 HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSL  160 (366)
Q Consensus        81 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~  160 (366)
                      ||++|+|+++|+++++|++||||+..                            ...|+|+||++++++.++++|+++++
T Consensus        91 ~E~~G~V~~vG~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~  142 (353)
T 4dup_A           91 LELSGEIVGVGPGVSGYAVGDKVCGL----------------------------ANGGAYAEYCLLPAGQILPFPKGYDA  142 (353)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCH
T ss_pred             cccEEEEEEECCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEEcHHHcEeCCCCCCH
Confidence            99999999999999999999999863                            24699999999999999999999999


Q ss_pred             cccccch-hhHHHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          161 EEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       161 ~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      ++||.+. +++|||+++ +.+++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..
T Consensus       143 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~  221 (353)
T 4dup_A          143 VKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS  221 (353)
T ss_dssp             HHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT
T ss_pred             HHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCc
Confidence            9998775 889999999 668999999999996 79999999999999999 7999999999999999999999988644


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-e-eechHhhhcCcEEEEeeccC-
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-T-VALTPAAAREVDVIGIFRYR-  314 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-  314 (366)
                        .++.+.++++.   ++++|++|||+|++ .+..++++|+++|+++.+|...... . ++...+..+++++.+++... 
T Consensus       222 --~~~~~~~~~~~---~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  295 (353)
T 4dup_A          222 --EDFAAVIKAET---GQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPR  295 (353)
T ss_dssp             --SCHHHHHHHHH---SSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTS
T ss_pred             --hHHHHHHHHHh---CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEecccc
Confidence              56777766654   67899999999975 7889999999999999999765432 3 66777888999999987652 


Q ss_pred             CC----------hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          315 ST----------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       315 ~~----------~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ..          ++++++++++|++  ++.++++|++  +++++|++.+++++..||+|+++
T Consensus       296 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          296 TAEEKRAIRDDLLSEVWPLLEAGTV--APVIHKVFAF--EDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             CHHHHHHHHHHHHHHTHHHHHHTSS--CCCEEEEEEG--GGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             chhhhHHHHHHHHHHHHHHHHCCCc--cCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            22          7789999999998  7788899999  99999999999999999999985

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.5e-52  Score=388.02  Aligned_cols=329  Identities=20%  Similarity=0.337  Sum_probs=280.8

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCC-CcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCC---CcccccceeEEEE
Q 017793           15 NMAAWLLGIKT-LKIQPYHLPTLGP-QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKK---PMVIGHECAGIIE   88 (366)
Q Consensus        15 ~~~~~~~~~~~-~~~~~~~~p~~~~-~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~---p~i~G~e~~G~V~   88 (366)
                      ||++++.+++. ++++++|.|+|++ +||+|||.|+|||++|++++.|..       .++ ..+   |.++|||++|+|+
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~-------~~~~~~~~~~p~v~G~E~~G~V~   73 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKL-------TLSTLPKGKDFLVLGHEAIGVVE   73 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC--------------CCSCEECCSEEEEEEC
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCC-------CCCCCCcCCCCCcCCcceEEEEE
Confidence            68888887765 9999999999999 999999999999999999988510       111 235   8999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793           89 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        89 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~  166 (366)
                      +  ++ ++|++||||++.+..+|++|.+|+.|++++|++..++  +.....|+|+||++++++.++++|++++ ++|+..
T Consensus        74 ~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aal~  149 (366)
T 2cdc_A           74 E--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILA  149 (366)
T ss_dssp             S--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGGGH
T ss_pred             e--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhhhc
Confidence            9  77 8899999999999999999999999999999987665  4322579999999999999999999999 888766


Q ss_pred             hhhHHHHHHHH-----hCCCC--C-------CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHHHHcCC
Q 017793          167 EPLSVGVHACR-----RANVG--P-------ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV---QRLSIARNLGA  229 (366)
Q Consensus       167 ~~~~~a~~~l~-----~~~~~--~-------~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~  229 (366)
                      .+++|||+++.     .++++  +       |++|||+|+|++|++++|+|+..|+ +|+++++++   ++.++++++|+
T Consensus       150 ~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga  228 (366)
T 2cdc_A          150 QPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKT  228 (366)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTC
T ss_pred             CcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCC
Confidence            68999999997     78888  8       9999999999999999999999999 899999988   89999999999


Q ss_pred             ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHH-HHHHHhhcCCceEEEEcccCCC-ceeechH---hhhcC
Q 017793          230 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM-STALNATRPGGKVCLIGLAKTE-MTVALTP---AAARE  304 (366)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~~~  304 (366)
                      +.+ + ..   ++.+.+.+ .  . .++|++||++|+...+ +.++++|+++|+++.+|..... ..++...   ++.++
T Consensus       229 ~~v-~-~~---~~~~~~~~-~--~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~  299 (366)
T 2cdc_A          229 NYY-N-SS---NGYDKLKD-S--V-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTN  299 (366)
T ss_dssp             EEE-E-CT---TCSHHHHH-H--H-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTT
T ss_pred             cee-c-hH---HHHHHHHH-h--C-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcC
Confidence            887 5 32   55556555 2  2 6899999999987678 8999999999999999876544 4555556   78899


Q ss_pred             cEEEEeecc-CCChHHHHHHHHCCCCC----CCCceEEEecCChhhHHHHHHHH-HcCCCceEEEeeC
Q 017793          305 VDVIGIFRY-RSTWPLCIEFLRSGKID----VKPLITHRFGFTQKEIEDAFEIS-AQGGNAIKVMFNL  366 (366)
Q Consensus       305 ~~~~~~~~~-~~~~~~~~~~l~~g~~~----~~~~~~~~~~l~~~~~~~a~~~~-~~~~~~gkvvi~~  366 (366)
                      +++.++..+ .++++++++++++|++.    +.+.++++|+|  +++++|++.+ .++...||+|+++
T Consensus       300 ~~i~g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l--~~~~~A~~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          300 KTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSI--NDEKELLKVLREKEHGEIKIRILW  365 (366)
T ss_dssp             CEEEECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEET--TCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred             cEEEEecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcH--HHHHHHHHHHhhhcCCceEEEEec
Confidence            999998765 56789999999999965    58889999999  9999999994 3366789999975

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.2e-50  Score=370.60  Aligned_cols=308  Identities=23%  Similarity=0.299  Sum_probs=266.3

Q ss_pred             CcccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793           11 DKNQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus        11 ~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      +|++||++++.+++   .++++++|.|+|++|||+|||.++|||++|++++.         |.++..+|.++|||++|+|
T Consensus         5 ~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~---------G~~~~~~P~i~G~e~~G~V   75 (334)
T 3qwb_A            5 IPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRK---------GIYPCEKPYVLGREASGTV   75 (334)
T ss_dssp             CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHH---------TSSCCCSSEECCSEEEEEE
T ss_pred             CchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHC---------CCCCCCCCCccccceEEEE
Confidence            67889999998663   49999999999999999999999999999999888         4444568999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEec-CCceEECCCCCCccc---c
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP-AKLCYKLPDNVSLEE---G  163 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~-~~~~~~~P~~~~~~~---a  163 (366)
                      +++|+++++|++||||++.                             .+|+|+||++++ ++.++++|+++++++   |
T Consensus        76 ~~vG~~v~~~~~GdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~a  126 (334)
T 3qwb_A           76 VAKGKGVTNFEVGDQVAYI-----------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEELKLY  126 (334)
T ss_dssp             EEECTTCCSCCTTCEEEEE-----------------------------CSSCSBSEEEEETTSSEEECCTTCCHHHHHHH
T ss_pred             EEECCCCCCCCCCCEEEEe-----------------------------eCCcceEEEEecCcceEEECCCCCCHHHhhhh
Confidence            9999999999999999863                             369999999999 999999999999999   6


Q ss_pred             ccch-hhHHHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCc
Q 017793          164 AMCE-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE  240 (366)
Q Consensus       164 a~~~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~  240 (366)
                      +.+. ...+||+++.. .++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  +
T Consensus       127 a~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~  203 (334)
T 3qwb_A          127 AAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASK--E  203 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--S
T ss_pred             hhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCC--c
Confidence            5554 77889999865 6899999999999 79999999999999999 7999999999999999999999988644  5


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc------
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY------  313 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~------  313 (366)
                      ++.+.+.++.  .+.++|++|||+|+ ..++.++++|+++|+++.+|..... ..++...+..+++++.+.+..      
T Consensus       204 ~~~~~~~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (334)
T 3qwb_A          204 DILRQVLKFT--NGKGVDASFDSVGK-DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADP  280 (334)
T ss_dssp             CHHHHHHHHT--TTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSH
T ss_pred             hHHHHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCH
Confidence            6777766554  36689999999997 5889999999999999999976543 355666777888998875432      


Q ss_pred             ---CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 ---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                         .+.++++++++++|++  ++.++++|++  +++++|++.+++++..||+|+++
T Consensus       281 ~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          281 EEWKYYSDEFFGLVNSKKL--NIKIYKTYPL--RDYRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCCBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHCCCc--cCceeeEEcH--HHHHHHHHHHHhCCCceEEEEec
Confidence               1234789999999999  5558899999  99999999999999999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.9e-50  Score=371.83  Aligned_cols=310  Identities=22%  Similarity=0.283  Sum_probs=261.3

Q ss_pred             cCCcccceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeE
Q 017793            9 EGDKNQNMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG   85 (366)
Q Consensus         9 ~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G   85 (366)
                      +.+|++||++++.+   ++.++++++|.|+|++|||+|||.++|||++|++++.|.+       .....+|.++|||++|
T Consensus        16 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~-------~~~~~~p~v~G~E~~G   88 (342)
T 4eye_A           16 TQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEY-------QLKMEPPFVPGIETAG   88 (342)
T ss_dssp             --CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCS-------SSCCCSSBCCCSEEEE
T ss_pred             ccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC-------CCCCCCCCccceeEEE
Confidence            35688899999986   4569999999999999999999999999999999988432       1124679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcccccc
Q 017793           86 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM  165 (366)
Q Consensus        86 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~  165 (366)
                      +|+++|++++ |++||||++.                            ...|+|+||++++++.++++|+++++++||.
T Consensus        89 ~V~~vG~~v~-~~vGDrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  139 (342)
T 4eye_A           89 VVRSAPEGSG-IKPGDRVMAF----------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVA  139 (342)
T ss_dssp             EEEECCTTSS-CCTTCEEEEE----------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHH
T ss_pred             EEEEECCCCC-CCCCCEEEEe----------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHH
Confidence            9999999999 9999999863                            2479999999999999999999999999976


Q ss_pred             ch-hhHHHHHHH-HhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcch
Q 017793          166 CE-PLSVGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV  242 (366)
Q Consensus       166 ~~-~~~~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~  242 (366)
                      +. +++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.   .++
T Consensus       140 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~---~~~  215 (342)
T 4eye_A          140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE---EGW  215 (342)
T ss_dssp             HTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS---TTH
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc---hhH
Confidence            64 899999999 5689999999999995 9999999999999999 899999999999999999999988864   566


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc--------
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY--------  313 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--------  313 (366)
                      .+.++++.  .+.++|++|||+|++ .+..++++|+++|+++.+|..... ..++...+..+++++.++...        
T Consensus       216 ~~~v~~~~--~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  292 (342)
T 4eye_A          216 AKAVREAT--GGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHAD  292 (342)
T ss_dssp             HHHHHHHT--TTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTT
T ss_pred             HHHHHHHh--CCCCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHH
Confidence            66666553  355899999999975 788999999999999999865543 345555678899999998743        


Q ss_pred             --CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 --RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 --~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                        .+.++++++++++| +  .+.++++|+|  +++++|++.+.+++..||+|++.
T Consensus       293 ~~~~~~~~~~~l~~~g-l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          293 YLYETQAGLEKLVAEG-M--RPPVSARIPL--SEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHHHHHHHHTT-C--CCCEEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHcC-C--CCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence              13588899999999 6  7888999999  99999999999999999999863

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=8e-50  Score=367.86  Aligned_cols=313  Identities=22%  Similarity=0.290  Sum_probs=262.7

Q ss_pred             cCCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793            9 EGDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus         9 ~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      .++|++||++++.++. +++++++|.|+|++|||+|||.++|||++|++++.|...      .....+|.++|||++|+|
T Consensus         2 s~~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~~~P~v~G~E~~G~V   75 (343)
T 3gaz_A            2 SLTTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAP------HAQQPLPAILGMDLAGTV   75 (343)
T ss_dssp             ----CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCG------GGCCCSSBCCCCEEEEEE
T ss_pred             CCCchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCC------CCCCCCCcccCcceEEEE
Confidence            3457889999999885 499999999999999999999999999999999885321      112567999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE  167 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~  167 (366)
                      +++|+++++|++||||+.....                       ....+|+|+||++++++.++++|+++++++||.++
T Consensus        76 ~~vG~~v~~~~vGdrV~~~~~g-----------------------~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~  132 (343)
T 3gaz_A           76 VAVGPEVDSFRVGDAVFGLTGG-----------------------VGGLQGTHAQFAAVDARLLASKPAALTMRQASVLP  132 (343)
T ss_dssp             EEECTTCCSCCTTCEEEEECCS-----------------------STTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSH
T ss_pred             EEECCCCCCCCCCCEEEEEeCC-----------------------CCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhh
Confidence            9999999999999999863210                       11257999999999999999999999999999886


Q ss_pred             -hhHHHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHH
Q 017793          168 -PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT  244 (366)
Q Consensus       168 -~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  244 (366)
                       .+.|||+++ +.+++++|++|||+| +|++|++++|+|+..|+ +|+++ .++++.++++++|++. ++   ...++.+
T Consensus       133 ~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~---~~~~~~~  206 (343)
T 3gaz_A          133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID---ASREPED  206 (343)
T ss_dssp             HHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE---TTSCHHH
T ss_pred             hhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec---cCCCHHH
Confidence             677999999 779999999999999 79999999999999999 78888 8899999999999988 55   3356777


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-----------
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-----------  313 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  313 (366)
                      .+.+..  .+.++|++|||+|+ ..+..++++|+++|+++.+|...   ..+...+..+++++.+++..           
T Consensus       207 ~~~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  280 (343)
T 3gaz_A          207 YAAEHT--AGQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAH  280 (343)
T ss_dssp             HHHHHH--TTSCEEEEEESSCT-HHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHH
T ss_pred             HHHHHh--cCCCceEEEECCCc-HHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHH
Confidence            766654  36789999999996 48899999999999999998654   33556677889999987653           


Q ss_pred             -CCChHHHHHHHHCCCCCCCCceE-EEecCChhhHHHHHHHHHcCCC----ceEEEeeC
Q 017793          314 -RSTWPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGN----AIKVMFNL  366 (366)
Q Consensus       314 -~~~~~~~~~~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~----~gkvvi~~  366 (366)
                       .+.++++++++++|++  ++.++ ++|+|  +++++|++.+++++.    .||+++++
T Consensus       281 ~~~~~~~~~~l~~~g~l--~~~i~~~~~~l--~~~~~A~~~~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          281 FGEMLREADALVQTGKL--APRLDPRTFSI--AEIGSAYDAVLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             HHHHHHHHHHHHHTTCC--CCCBCSCCEET--TCHHHHHHHHHTCTTCCCCSSBCEEEC
T ss_pred             HHHHHHHHHHHHHCCCc--ccCccCcEecH--HHHHHHHHHHHcCCCcccccceEEEEe
Confidence             2568899999999999  66777 68999  999999999998855    67888764

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2.7e-49  Score=364.90  Aligned_cols=306  Identities=19%  Similarity=0.239  Sum_probs=262.4

Q ss_pred             ccceEEEEee------CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793           13 NQNMAAWLLG------IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI   86 (366)
Q Consensus        13 ~~~~~~~~~~------~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   86 (366)
                      ++||++++.+      ++.++++++|.|+|++|||+|||.++|||++|++++.|.          ...+|.++|||++|+
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~----------~~~~p~i~G~e~~G~   70 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD----------VSKAPRVLGFDAIGV   70 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC----------CSSSCBCCCCCEEEE
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC----------CCCCCcCcCCccEEE
Confidence            4689999985      358999999999999999999999999999999988832          356799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793           87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~  166 (366)
                      |+++|+++++|++||||+....                         ...+|+|+||++++++.++++|+++++++||.+
T Consensus        71 V~~vG~~v~~~~~GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~  125 (346)
T 3fbg_A           71 VESVGNEVTMFNQGDIVYYSGS-------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSL  125 (346)
T ss_dssp             EEEECTTCCSCCTTCEEEECCC-------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTS
T ss_pred             EEEeCCCCCcCCCCCEEEEcCC-------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhc
Confidence            9999999999999999986321                         234799999999999999999999999999988


Q ss_pred             h-hhHHHHHHHH-hCCCC------CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          167 E-PLSVGVHACR-RANVG------PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       167 ~-~~~~a~~~l~-~~~~~------~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      + ...|||+++. .++++      +|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..
T Consensus       126 ~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~  204 (346)
T 3fbg_A          126 PLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE  204 (346)
T ss_dssp             HHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS
T ss_pred             chhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc
Confidence            6 6678999984 68888      999999995 89999999999999999 8999999999999999999999988642


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc----
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY----  313 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----  313 (366)
                         ++.+.++++   .++++|++|||+|++..++.++++|+++|+++.++...  ..++...+..+++++.+....    
T Consensus       205 ---~~~~~~~~~---~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  276 (346)
T 3fbg_A          205 ---SLLNQFKTQ---GIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSFSHEFMFARPL  276 (346)
T ss_dssp             ---CHHHHHHHH---TCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEEEECCTTHHHH
T ss_pred             ---cHHHHHHHh---CCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEEEEEEEecccc
Confidence               566666554   46789999999998877899999999999999887433  334555667788888886543    


Q ss_pred             ---------CCChHHHHHHHHCCCCCCCCceEEEe---cCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 ---------RSTWPLCIEFLRSGKIDVKPLITHRF---GFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 ---------~~~~~~~~~~l~~g~~~~~~~~~~~~---~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                               .+.++++++++++|++  ++.++++|   ++  +++++|++.+.+++..||+|+++
T Consensus       277 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l--~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          277 NQTDDMIKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTT--ENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             TTCTTTHHHHHHHHHHHHHHHTTSS--CCCEEEEEESCCH--HHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cchhhHHHHHHHHHHHHHHHHCCCE--ECCccceecCCCH--HHHHHHHHHHhcCCcceEEEEec
Confidence                     1347889999999999  67777777   67  99999999999999999999974

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=6.9e-49  Score=365.26  Aligned_cols=315  Identities=20%  Similarity=0.266  Sum_probs=258.1

Q ss_pred             CcccceEEEEeeCCceEEE-EecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGIKTLKIQ-PYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      ||++||++++.+++.++++ ++|.|+|++|||+|||.++|||++|++++.|           ...+|.++|||++|+|++
T Consensus         8 ~p~~mkA~v~~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g-----------~~~~p~v~G~e~~G~V~~   76 (371)
T 3gqv_A            8 PPPQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQ-----------FATPWAFLGTDYAGTVVA   76 (371)
T ss_dssp             CCSCEEEEEECTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC----------------CCTTSCCCSEEEEEEEE
T ss_pred             CchhceeEEEcCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhc-----------CCCCCccCccccEEEEEE
Confidence            5678999999999999999 9999999999999999999999999988773           134689999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~  168 (366)
                      +|++|++|++||||+..       |..|..+.             ..+|+|+||++++++.++++|+++++++|++++ .
T Consensus        77 vG~~v~~~~~GdrV~~~-------~~~~~~~~-------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~  136 (371)
T 3gqv_A           77 VGSDVTHIQVGDRVYGA-------QNEMCPRT-------------PDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAG  136 (371)
T ss_dssp             ECTTCCSCCTTCEEEEE-------CCTTCTTC-------------TTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHH
T ss_pred             eCCCCCCCCCCCEEEEe-------ccCCCCCC-------------CCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhh
Confidence            99999999999999754       33443322             357999999999999999999999999999886 5


Q ss_pred             hHHHHHHH-Hh-CCC-----------CCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeee
Q 017793          169 LSVGVHAC-RR-ANV-----------GPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  234 (366)
Q Consensus       169 ~~~a~~~l-~~-~~~-----------~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  234 (366)
                      +.|||+++ +. .++           ++|++|||+|+ |++|++++|+|+..|+ +|+++. +++|.++++++|++.+++
T Consensus       137 ~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~  214 (371)
T 3gqv_A          137 ISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFD  214 (371)
T ss_dssp             HHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEE
Confidence            77899998 44 443           89999999996 9999999999999999 677775 789999999999999998


Q ss_pred             cCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhh-cCCceEEEEcccCC----C--ceee---chHhhhcC
Q 017793          235 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT-RPGGKVCLIGLAKT----E--MTVA---LTPAAARE  304 (366)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~----~--~~~~---~~~~~~~~  304 (366)
                      +..  +++.+.++++.   ++++|++|||+|++..++.++++| +++|+++.+|....    .  ....   ...++.++
T Consensus       215 ~~~--~~~~~~v~~~t---~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~  289 (371)
T 3gqv_A          215 YRA--PNLAQTIRTYT---KNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEG  289 (371)
T ss_dssp             TTS--TTHHHHHHHHT---TTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSC
T ss_pred             CCC--chHHHHHHHHc---cCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccc
Confidence            754  56777776654   456999999999988899999999 59999999985442    1  1111   12356677


Q ss_pred             cEEEEeeccC----------CChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCce-EEEee
Q 017793          305 VDVIGIFRYR----------STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAI-KVMFN  365 (366)
Q Consensus       305 ~~~~~~~~~~----------~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~g-kvvi~  365 (366)
                      +++.+++...          +.++++++++++|++.+.+.+++.|+|  +++++|++.+.+++..| |+|++
T Consensus       290 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l--~~~~~A~~~l~~g~~~Gkkvvv~  359 (371)
T 3gqv_A          290 STWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGF--DHIKQGMELVRKGELSGEKLVVR  359 (371)
T ss_dssp             BSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECH--HHHHHHHHHHHTTCCSSCEEEEE
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcH--HHHHHHHHHHHcCCCceEEEEEE
Confidence            8877764331          124578899999999888888888889  99999999999998888 55554

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=7.3e-50  Score=365.07  Aligned_cols=308  Identities=18%  Similarity=0.244  Sum_probs=257.1

Q ss_pred             ccceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           13 NQNMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        13 ~~~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      ++||++++.++   +.++++++|.|+|++|||+|||.++|||++|++++.|.....   ......+|.++|||++|+|++
T Consensus         5 ~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---~~~~~~~p~v~G~E~~G~V~~   81 (321)
T 3tqh_A            5 KEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVA---KKLKNNLPSGLGYDFSGEVIE   81 (321)
T ss_dssp             CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHH---HHHTTSCSBCCCCEEEEEEEE
T ss_pred             ccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCcccc---ccccCCCCCcccceeEEEEEE
Confidence            46899999865   349999999999999999999999999999999988521100   012356799999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~  168 (366)
                      +|+++++|++||||+..+..                        ....|+|+||++++++.++++|+++++++||.++ .
T Consensus        82 vG~~v~~~~~GdrV~~~~~~------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  137 (321)
T 3tqh_A           82 LGSDVNNVNIGDKVMGIAGF------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTA  137 (321)
T ss_dssp             ECTTCCSCCTTCEEEEECST------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHH
T ss_pred             eCCCCCCCCCCCEEEEccCC------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhH
Confidence            99999999999999875321                        1347999999999999999999999999999886 5


Q ss_pred             hHHHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcc-hHHHH
Q 017793          169 LSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED-VDTDV  246 (366)
Q Consensus       169 ~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~~  246 (366)
                      +.|||++++.+++++|++|||+| +|++|++++|+|+..|+ +|+++. ++++.++++++|++.++++..  .+ +.+. 
T Consensus       138 ~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~--~~~~~~~-  212 (321)
T 3tqh_A          138 GLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHE--EDFLLAI-  212 (321)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTT--SCHHHHC-
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCC--cchhhhh-
Confidence            67999999889999999999997 89999999999999999 778775 566789999999999988654  23 3222 


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc--CCChHHHHHHH
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFL  324 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l  324 (366)
                             -.++|++|||+|++. ...++++|+++|+++.+|......  .......+++++.+++..  .++++++++++
T Consensus       213 -------~~g~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  282 (321)
T 3tqh_A          213 -------STPVDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQFNIEELHYLGKLV  282 (321)
T ss_dssp             -------CSCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCCCCHHHHHHHHHHH
T ss_pred             -------ccCCCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecCCCHHHHHHHHHHH
Confidence                   258999999999764 589999999999999997544321  122456778888885433  46799999999


Q ss_pred             HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++|++  ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       283 ~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          283 SEDKL--RIEISRIFQL--SEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             HTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HCCCc--ccccccEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            99999  5678899999  99999999999999999999975

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=2e-49  Score=367.68  Aligned_cols=313  Identities=18%  Similarity=0.210  Sum_probs=261.8

Q ss_pred             cCCcccceEEEEee------CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccc
Q 017793            9 EGDKNQNMAAWLLG------IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHE   82 (366)
Q Consensus         9 ~~~~~~~~~~~~~~------~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e   82 (366)
                      +.++++||++++.+      +..++++++|.|+|++|||+|||.++|||++|++++.|..        ....+|.++|||
T Consensus        17 ~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~p~v~G~E   88 (363)
T 4dvj_A           17 NLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTP--------PDGTDWKVIGYD   88 (363)
T ss_dssp             --CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCC--------C--CCSBCCCCC
T ss_pred             hhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCC--------CCCCCCCcccce
Confidence            34567789999863      4679999999999999999999999999999999988532        124678999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc
Q 017793           83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE  162 (366)
Q Consensus        83 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~  162 (366)
                      ++|+|+++|+++++|++||||+..+.                         ....|+|+||++++++.++++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~  143 (363)
T 4dvj_A           89 AAGIVSAVGPDVTLFRPGDEVFYAGS-------------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAE  143 (363)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCC-------------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHH
T ss_pred             eEEEEEEeCCCCCCCCCCCEEEEccC-------------------------CCCCccceEEEEeCHHHeeECCCCCCHHH
Confidence            99999999999999999999986321                         12479999999999999999999999999


Q ss_pred             cccch-hhHHHHHHH-HhCCCC-----CCCEEEEEC-CCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceee
Q 017793          163 GAMCE-PLSVGVHAC-RRANVG-----PETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETA  233 (366)
Q Consensus       163 aa~~~-~~~~a~~~l-~~~~~~-----~~~~vlI~G-~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~  233 (366)
                      ||+++ .+.|||+++ +..+++     +|++|||+| +|++|++++|+|+.+ |+ +|+++++++++.++++++|++.++
T Consensus       144 aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi  222 (363)
T 4dvj_A          144 AAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVI  222 (363)
T ss_dssp             HHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEE
T ss_pred             HHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            99886 577999998 567888     899999998 799999999999985 77 899999999999999999999998


Q ss_pred             ecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc
Q 017793          234 KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY  313 (366)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (366)
                      ++..   ++.+.++++   .++++|+||||+|++..++.++++|+++|+++.+|..   ..++...+..+++++.+....
T Consensus       223 ~~~~---~~~~~v~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~  293 (363)
T 4dvj_A          223 DHSK---PLAAEVAAL---GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMF  293 (363)
T ss_dssp             CTTS---CHHHHHHTT---CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTT
T ss_pred             eCCC---CHHHHHHHh---cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEee
Confidence            8642   565555544   4679999999999877899999999999999999643   244556677788888886543


Q ss_pred             -------------CCChHHHHHHHHCCCCCCCCceEEEe-cCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 -------------RSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 -------------~~~~~~~~~~l~~g~~~~~~~~~~~~-~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                                   .+.++++++++++|++  ++.+.+++ .++++++++|++.+.+++..||+|+++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          294 TRPMFGTPDMSEQGRLLNDVSRLVDEGRL--RTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             HHHHHTCTTTHHHHHHHHHHHHHHHHTSS--CCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             ccccccCcchhhHHHHHHHHHHHHHCCCe--eccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence                         1347889999999999  66777766 233399999999999999999999974

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=4e-49  Score=363.03  Aligned_cols=311  Identities=18%  Similarity=0.204  Sum_probs=257.2

Q ss_pred             CcccceEEEEeeCCc----eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793           11 DKNQNMAAWLLGIKT----LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI   86 (366)
Q Consensus        11 ~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   86 (366)
                      |+++||++++.+++.    ++++++|.|+|++|||+|||+++|||++|++++.|.+.       ....+|.++|||++|+
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~~~p~i~G~E~~G~   73 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYA-------HRIPLPNIPGYEGVGI   73 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTT-------TTSCSSBCCCSCCEEE
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCC-------CCCCCCCcCCcceEEE
Confidence            556899999997643    89999999999999999999999999999999885321       1246799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793           87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~  166 (366)
                      |+++|+++++|++||||+..                            ..+|+|+||++++++.++++|+++++++||++
T Consensus        74 V~~vG~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l  125 (340)
T 3gms_A           74 VENVGAFVSRELIGKRVLPL----------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQM  125 (340)
T ss_dssp             EEEECTTSCGGGTTCEEEEC----------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTS
T ss_pred             EEEeCCCCCCCCCCCEEEec----------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhh
Confidence            99999999999999999853                            24799999999999999999999999999976


Q ss_pred             h-hhHHHHHHH-HhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchH
Q 017793          167 E-PLSVGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  243 (366)
Q Consensus       167 ~-~~~~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  243 (366)
                      + ...+||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .++.
T Consensus       126 ~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~--~~~~  202 (340)
T 3gms_A          126 YINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTST--APLY  202 (340)
T ss_dssp             SHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTT--SCHH
T ss_pred             cchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCc--ccHH
Confidence            5 777888887 5689999999999995 5999999999999999 7999999999999999999999888643  5677


Q ss_pred             HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhh-hcCcEEEEeecc---------
Q 017793          244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIFRY---------  313 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---------  313 (366)
                      +.+.++.  .+.++|++|||+|++ .....+++|+++|+++.+|..... ..+...+. ...+.+...+..         
T Consensus       203 ~~~~~~~--~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (340)
T 3gms_A          203 ETVMELT--NGIGADAAIDSIGGP-DGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPY  278 (340)
T ss_dssp             HHHHHHT--TTSCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHH
T ss_pred             HHHHHHh--CCCCCcEEEECCCCh-hHHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHH
Confidence            7666554  356899999999976 455667999999999999976542 22222222 234444443311         


Q ss_pred             --CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCC-ceEEEeeC
Q 017793          314 --RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFNL  366 (366)
Q Consensus       314 --~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi~~  366 (366)
                        .+.++++++++++|++.+.+ ++++|++  +++++|++.+++++. .||+++++
T Consensus       279 ~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l--~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          279 KWQETFRHLIRLVENEQLRFMK-VHSTYEL--ADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCCC-EEEEEEG--GGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCcccc-ccEEEeH--HHHHHHHHHHHhcCCCCCeEEEEE
Confidence              45788999999999996654 7899999  999999999999975 59999974

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=3.4e-49  Score=364.63  Aligned_cols=307  Identities=23%  Similarity=0.330  Sum_probs=253.2

Q ss_pred             cccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793           12 KNQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE   88 (366)
Q Consensus        12 ~~~~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   88 (366)
                      +++||++++.++.   .+++++.|.|+|++|||+|||.++|||++|++++.|.+       .....+|.++|||++|+|+
T Consensus         1 sm~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~-------~~~~~~p~v~G~e~~G~V~   73 (349)
T 4a27_A            1 SMEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNI-------DNPPKTPLVPGFECSGIVE   73 (349)
T ss_dssp             CCCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCS-------SSCCCSSBCCCSEEEEEEE
T ss_pred             CceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCc-------CCCCCCCccccceeEEEEE
Confidence            3579999999764   69999999999999999999999999999999998532       1224679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-
Q 017793           89 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-  167 (366)
Q Consensus        89 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-  167 (366)
                      ++|+++++|++||||+..                            ..+|+|+||++++++.++++|+++++++||.++ 
T Consensus        74 ~vG~~v~~~~~GdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  125 (349)
T 4a27_A           74 ALGDSVKGYEIGDRVMAF----------------------------VNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPM  125 (349)
T ss_dssp             EECTTCCSCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHH
T ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCcceEEEEecHHHeEECCCCCCHHHHHHHHH
Confidence            999999999999999863                            246999999999999999999999999999886 


Q ss_pred             hhHHHHHHH-HhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793          168 PLSVGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  245 (366)
Q Consensus       168 ~~~~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  245 (366)
                      ++.|||+++ +.+++++|++|||+|+ |++|++++|+|+..|..+|++++ ++++.++++ +|++.+++ .  ..++.+.
T Consensus       126 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~--~~~~~~~  200 (349)
T 4a27_A          126 NFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-R--NADYVQE  200 (349)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-T--TSCHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-C--CccHHHH
Confidence            788999998 4589999999999995 99999999999999755788886 667888888 99999887 2  3577777


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-----------------ceeechHhhhcCcEEE
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-----------------MTVALTPAAAREVDVI  308 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~~~  308 (366)
                      ++++   .++++|+||||+|++ ..+.++++|+++|+++.+|.....                 ...+...++.++.++.
T Consensus       201 ~~~~---~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~  276 (349)
T 4a27_A          201 VKRI---SAEGVDIVLDCLCGD-NTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIA  276 (349)
T ss_dssp             HHHH---CTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEE
T ss_pred             HHHh---cCCCceEEEECCCch-hHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEE
Confidence            7665   367999999999976 458899999999999999864311                 1133345677888888


Q ss_pred             Eeecc------------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          309 GIFRY------------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       309 ~~~~~------------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++..            .+.++++++++++|++  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       277 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          277 GFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWAL--EEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             EECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEECG--GGHHHHHHHHHTTCCSSEEEEET
T ss_pred             EEeehheeccccchHHHHHHHHHHHHHHHCCCc--cccccceECH--HHHHHHHHHHHhCCCCceEEEec
Confidence            87642            3568899999999999  7888899999  99999999999999999999974

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2e-50  Score=367.85  Aligned_cols=298  Identities=20%  Similarity=0.273  Sum_probs=239.7

Q ss_pred             ccceEEEEe-eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           13 NQNMAAWLL-GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        13 ~~~~~~~~~-~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ++||++++. +++.++++++|.|+|++|||+|||.++|||++|++++.|.+        ....+|.++|||++|+|+++|
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~p~i~G~e~~G~V~~vG   74 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANP--------INWSNGHVPGVDGAGVIVKVG   74 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCT--------TCCCTTCCCCSEEEEEEEEEC
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCC--------CcCCCCCEeeeeeEEEEEEeC
Confidence            468999999 67899999999999999999999999999999999998532        124679999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +++++|++||||+..+.                         ...+|+|+||++++++.++++|+++++++||++. +++
T Consensus        75 ~~v~~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  129 (315)
T 3goh_A           75 AKVDSKMLGRRVAYHTS-------------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLL  129 (315)
T ss_dssp             TTSCGGGTTCEEEEECC-------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHH
T ss_pred             CCCCCCCCCCEEEEeCC-------------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHH
Confidence            99999999999997531                         2347999999999999999999999999998665 899


Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      |||++++.+++++|++|||+|+|++|++++|+|+..|+ +|++++ +++|.++++++|++.+++      + .+.+    
T Consensus       130 ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~------d-~~~v----  196 (315)
T 3goh_A          130 TAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR------E-PSQV----  196 (315)
T ss_dssp             HHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES------S-GGGC----
T ss_pred             HHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc------C-HHHh----
Confidence            99999977999999999999999999999999999999 899998 899999999999998773      1 2222    


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeec--hHhhhcCcEEEEeecc---------CCChHH
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL--TPAAAREVDVIGIFRY---------RSTWPL  319 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~  319 (366)
                         +.++|++|||+|++ ....++++|+++|+++.+|........+.  ..+..+.+++.+++..         .+.+++
T Consensus       197 ---~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (315)
T 3goh_A          197 ---TQKYFAIFDAVNSQ-NAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEA  272 (315)
T ss_dssp             ---CSCEEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHH
T ss_pred             ---CCCccEEEECCCch-hHHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHH
Confidence               67899999999986 45788999999999999975432221111  1122222222222221         124678


Q ss_pred             HHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          320 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++++|++  ++.++++|+|  +++++|++.+.  +..||+|+++
T Consensus       273 ~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~--~~~gKvvi~~  313 (315)
T 3goh_A          273 LLTLIAQGKM--EIAAPDIFRF--EQMIEALDHSE--QTKLKTVLTL  313 (315)
T ss_dssp             HHHHHHTTSS--CCCCCEEEEG--GGHHHHHHHHH--HHCCCEEEES
T ss_pred             HHHHHHCCCc--ccccceEecH--HHHHHHHHHHH--hcCCcEEEEe
Confidence            9999999998  6788899999  99999999998  6778999875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.4e-48  Score=357.16  Aligned_cols=306  Identities=27%  Similarity=0.269  Sum_probs=258.5

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEEEEEe
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~v   90 (366)
                      ||++++.++   +.++++++|.|+|++|||+|||.++|||++|++++.|.         ++ ..+|.++|||++|+|+++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---------~~~~~~p~v~G~e~~G~V~~v   72 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGL---------YPAPFLPSGLGAEGAGVVEAV   72 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTS---------SCCSSSSBCCCCCEEEEEEEE
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCC---------CCCCCCCCCCCceeEEEEEEE
Confidence            788888854   45999999999999999999999999999999998843         22 367999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hh
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PL  169 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~  169 (366)
                      |+++++|++||||++.+                           ...|+|+||++++++.++++|+++++++||.++ ..
T Consensus        73 G~~v~~~~~GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~  125 (325)
T 3jyn_A           73 GDEVTRFKVGDRVAYGT---------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKG  125 (325)
T ss_dssp             CTTCCSCCTTCEEEESS---------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEec---------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhH
Confidence            99999999999998631                           247999999999999999999999999999775 77


Q ss_pred             HHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793          170 SVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       170 ~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      .+||+++. .+++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .++.+.+.
T Consensus       126 ~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~~~  202 (325)
T 3jyn_A          126 LTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSH--EDVAKRVL  202 (325)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHH
Confidence            88898885 47899999999998 79999999999999999 7999999999999999999999988643  56777766


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhc-CcEEEEeec-----cCCC----
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAR-EVDVIGIFR-----YRST----  316 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~~~~~~~-----~~~~----  316 (366)
                      ++.  .+.++|++|||+|+ ..+..++++|+++|+++.+|...... .++...+..+ .+.+.+...     ...+    
T Consensus       203 ~~~--~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (325)
T 3jyn_A          203 ELT--DGKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTM  279 (325)
T ss_dssp             HHT--TTCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHH
T ss_pred             HHh--CCCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHH
Confidence            554  35689999999997 57899999999999999999765432 4555555555 556654321     1233    


Q ss_pred             hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++++++++++|++.  +.++++|++  +++++|++.+.+++..||+|+..
T Consensus       280 ~~~~~~l~~~g~l~--~~i~~~~~l--~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          280 ADELFDMLASGKLK--VDGIEQYAL--KDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHHHHTTSSC--CCCCEEEEG--GGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHHHHCCCee--CccccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            45899999999994  446789999  99999999999999999999863

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=9.8e-49  Score=362.69  Aligned_cols=314  Identities=16%  Similarity=0.204  Sum_probs=253.6

Q ss_pred             CCcccceEEEEeeCCc----eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeE
Q 017793           10 GDKNQNMAAWLLGIKT----LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG   85 (366)
Q Consensus        10 ~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G   85 (366)
                      .||.+||++++.+++.    ++++++|.|+|++|||+|||.++|||++|++++.|.+.       ....+|.++|||++|
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-------~~~~~P~v~G~E~~G   94 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG-------LLPELPAVGGNEGVA   94 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSS-------CCCCSSEECCSCCEE
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCC-------CCCCCCccccceEEE
Confidence            5677899999987754    89999999999999999999999999999999885321       112468999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcccccc
Q 017793           86 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM  165 (366)
Q Consensus        86 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~  165 (366)
                      +|+++|+++++|++||||++.+                           ...|+|+||++++++.++++|+++++++||+
T Consensus        95 ~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~  147 (357)
T 1zsy_A           95 QVVAVGSNVTGLKPGDWVIPAN---------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQSAAT  147 (357)
T ss_dssp             EEEEECTTCCSCCTTCEEEESS---------------------------SCSCCSBSEEEEEGGGEEEECSSSCHHHHHH
T ss_pred             EEEEeCCCCCCCCCCCEEEEcC---------------------------CCCccceeEEecCHHHcEECCCCCCHHHHhh
Confidence            9999999999999999998642                           1369999999999999999999999999998


Q ss_pred             ch-hhHHHHHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHHHHcCCceeeecCCCC
Q 017793          166 CE-PLSVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDV---QRLSIARNLGADETAKVSTDI  239 (366)
Q Consensus       166 ~~-~~~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~~~~~~~~~~~  239 (366)
                      ++ .+.|||+++. .+++++|++|||+|+ |++|++++|+||..|++.|+++++++   ++.++++++|++.++++... 
T Consensus       148 l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~-  226 (357)
T 1zsy_A          148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL-  226 (357)
T ss_dssp             TTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH-
T ss_pred             hcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcc-
Confidence            86 6789999985 478999999999995 99999999999999995555554443   35788999999998875321 


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCceeechHhhhcCcEEEEeecc-----
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-----  313 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----  313 (366)
                        ..+.+.++.. ...++|+||||+|++. ...++++++++|+++.+|... ....++...+..+++++.+++.+     
T Consensus       227 --~~~~~~~~~~-~~~~~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  302 (357)
T 1zsy_A          227 --RRPEMKNFFK-DMPQPRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKD  302 (357)
T ss_dssp             --HSGGGGGTTS-SSCCCSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHH
T ss_pred             --hHHHHHHHHh-CCCCceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhccc
Confidence              1112222211 1126999999999764 467899999999999998543 23345555677899999997642     


Q ss_pred             ------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 ------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 ------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                            .+.++++++++++|++.  +.+.++|+|  +++++|++.+.+++..||+|+++
T Consensus       303 ~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          303 HSPDQFKELILTLCDLIRRGQLT--APACSQVPL--QDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTSSC--CCCEEEEEG--GGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCc--CccceEEcH--HHHHHHHHHHHhCCCCCcEEEeC
Confidence                  23578899999999994  445689999  99999999999998889999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=8.6e-50  Score=368.77  Aligned_cols=312  Identities=18%  Similarity=0.161  Sum_probs=260.0

Q ss_pred             CcccceEEEEe------eCCceEEEEe---------cCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCC
Q 017793           11 DKNQNMAAWLL------GIKTLKIQPY---------HLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK   75 (366)
Q Consensus        11 ~~~~~~~~~~~------~~~~~~~~~~---------~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~   75 (366)
                      +|.+||++++.      +++.++++++         |.|+|++|||+|||+++|||++|++++.|.+.       ....+
T Consensus         7 ~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-------~~~~~   79 (349)
T 3pi7_A            7 IPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYG-------QPRVK   79 (349)
T ss_dssp             CCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSS-------SCBCT
T ss_pred             CchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCC-------CCCCC
Confidence            57789999998      4578888888         99999999999999999999999999985321       12467


Q ss_pred             CcccccceeEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEEC
Q 017793           76 PMVIGHECAGIIEEVGSEV-KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL  154 (366)
Q Consensus        76 p~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~  154 (366)
                      |.++|||++|+|+++|++| ++|++||||++...                         ...+|+|+||++++++.++++
T Consensus        80 p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------------~~~~G~~aey~~v~~~~~~~i  134 (349)
T 3pi7_A           80 GRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------------LSNWGSWAEYAVAEAAACIPL  134 (349)
T ss_dssp             TSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------------TSSCCSSBSEEEEEGGGEEEC
T ss_pred             CCCccceEEEEEEEECCCccCCCCCCCEEEEecc-------------------------CCCCccceeeEeechHHeEEC
Confidence            9999999999999999999 99999999997421                         235799999999999999999


Q ss_pred             CCCCCccccccch-hhHHHHHHHHhCCCCCC-CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          155 PDNVSLEEGAMCE-PLSVGVHACRRANVGPE-TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       155 P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~-~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      |+++++++||.++ ...|||+++++++ +++ +++||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.
T Consensus       135 P~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~  212 (349)
T 3pi7_A          135 LDTVRDEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAH  212 (349)
T ss_dssp             CTTCCC--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSE
T ss_pred             CCCCCHHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCE
Confidence            9999999999765 6778887777766 677 6888885 89999999999999999 8999999999999999999999


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-Cceeec-hHhhhcCcEEEE
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVAL-TPAAAREVDVIG  309 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~~~~  309 (366)
                      ++++..  .++.+.++++..  +.++|++|||+|++ ....++++|+++|+++.+|.... ...++. ..+..+++++.+
T Consensus       213 ~~~~~~--~~~~~~v~~~~~--~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  287 (349)
T 3pi7_A          213 VLNEKA--PDFEATLREVMK--AEQPRIFLDAVTGP-LASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEG  287 (349)
T ss_dssp             EEETTS--TTHHHHHHHHHH--HHCCCEEEESSCHH-HHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEE
T ss_pred             EEECCc--HHHHHHHHHHhc--CCCCcEEEECCCCh-hHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEE
Confidence            988644  577777776653  46899999999976 56889999999999999986443 344555 678889999999


Q ss_pred             eecc----------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          310 IFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       310 ~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++..          .+.++++++++++|++  ++.++++|+|  +++++|++.+. +...||+|++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          288 FWLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPL--AEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             CCHHHHHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEH--HHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             EEehhhhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcH--HHHHHHHHHHh-CCCCceEEEeC
Confidence            8754          3467788899999999  6778899999  99999999555 45779999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1e-47  Score=354.63  Aligned_cols=311  Identities=22%  Similarity=0.332  Sum_probs=258.6

Q ss_pred             CcccceEEEEeeC---CceEE-EEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793           11 DKNQNMAAWLLGI---KTLKI-QPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI   86 (366)
Q Consensus        11 ~~~~~~~~~~~~~---~~~~~-~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   86 (366)
                      .+++||++++.++   +.+++ +++|.|+|++|||+|||.++|||++|++++.|.+.       ....+|.++|||++|+
T Consensus        26 ~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-------~~~~~P~v~G~E~~G~   98 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS-------RKPLLPYTPGSDVAGV   98 (351)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSS-------CCCCSSBCCCSCEEEE
T ss_pred             CcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC-------CCCCCCCcCCceeEEE
Confidence            4556888888754   46899 79999999999999999999999999998884321       1235789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793           87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  166 (366)
Q Consensus        87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~  166 (366)
                      |+++|+++++|++||||++.+                           ...|+|+||++++++.++++|+++++++||.+
T Consensus        99 V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l  151 (351)
T 1yb5_A           99 IEAVGDNASAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAI  151 (351)
T ss_dssp             EEEECTTCTTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTT
T ss_pred             EEEECCCCCCCCCCCEEEEeC---------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhh
Confidence            999999999999999998631                           13699999999999999999999999999877


Q ss_pred             h-hhHHHHHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchH
Q 017793          167 E-PLSVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  243 (366)
Q Consensus       167 ~-~~~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  243 (366)
                      + ++.|||+++. .+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.++++++|++.++++..  .++.
T Consensus       152 ~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~  228 (351)
T 1yb5_A          152 GIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYI  228 (351)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--TTHH
T ss_pred             hhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCC--chHH
Confidence            6 8999999996 689999999999995 9999999999999999 7999999999999999999998887643  4666


Q ss_pred             HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc---CCCh---
Q 017793          244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY---RSTW---  317 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---  317 (366)
                      +.+.+..  .+.++|++|||+|+. .+..++++|+++|+++.+|... ...++...+..+++++.++...   .+++   
T Consensus       229 ~~~~~~~--~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  304 (351)
T 1yb5_A          229 DKIKKYV--GEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFSSTKEEFQQY  304 (351)
T ss_dssp             HHHHHHH--CTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGGCCHHHHHHH
T ss_pred             HHHHHHc--CCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEecCC-CCccCHHHHHhCCcEEEEEEeecCCHHHHHHH
Confidence            6665543  245899999999965 7888999999999999998643 3345556677888999987532   2233   


Q ss_pred             -HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHH-HHcCCCceEEEeeC
Q 017793          318 -PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI-SAQGGNAIKVMFNL  366 (366)
Q Consensus       318 -~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~-~~~~~~~gkvvi~~  366 (366)
                       +.+.+++++|++  ++.++++|+|  +++++|++. ++++...||+|+++
T Consensus       305 ~~~l~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          305 AAALQAGMEIGWL--KPVIGSQYPL--EKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHHHHHTCC--CCCEEEEEEG--GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHHHHCCCc--cCccceEEcH--HHHHHHHHHHHHhCCCCeEEEEeC
Confidence             445667888887  7788899999  999999998 66667789999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=4.9e-48  Score=357.48  Aligned_cols=316  Identities=18%  Similarity=0.243  Sum_probs=260.1

Q ss_pred             ccCCcccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCccccccee
Q 017793            8 DEGDKNQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECA   84 (366)
Q Consensus         8 ~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~   84 (366)
                      ...++++||++++.+++   .++++++|.|+|+++||+|||.++|||++|+++..|.+.       ....+|.++|||++
T Consensus        16 ~~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-------~~~~~p~v~G~E~~   88 (354)
T 2j8z_A           16 ENLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYD-------PPPGASNILGLEAS   88 (354)
T ss_dssp             -----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSC-------CCTTSCSSSCSEEE
T ss_pred             cccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCC-------CCCCCCcccceeeE
Confidence            34567889999988664   699999999999999999999999999999999885321       11346899999999


Q ss_pred             EEEEEeCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcccc
Q 017793           85 GIIEEVGSEV-KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG  163 (366)
Q Consensus        85 G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~a  163 (366)
                      |+|+++|++| ++|++||||+..                            ...|+|+||++++++.++++|+++++++|
T Consensus        89 G~V~~vG~~v~~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~a  140 (354)
T 2j8z_A           89 GHVAELGPGCQGHWKIGDTAMAL----------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQA  140 (354)
T ss_dssp             EEEEEECSCC--CCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHH
T ss_pred             EEEEEECCCcCCCCCCCCEEEEe----------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHH
Confidence            9999999999 999999999863                            13599999999999999999999999999


Q ss_pred             ccch-hhHHHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCc
Q 017793          164 AMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE  240 (366)
Q Consensus       164 a~~~-~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~  240 (366)
                      |+++ ++.|||+++ +.+++++|++|||+| +|++|++++|+++..|+ +|+++++++++.+.++++|++.++++..  .
T Consensus       141 a~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~  217 (354)
T 2j8z_A          141 AAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK--E  217 (354)
T ss_dssp             TTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT--S
T ss_pred             HhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC--h
Confidence            8775 889999999 568999999999998 79999999999999999 7899999999999999999998887643  4


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeec-hHhhhcCcEEEEeeccCC---
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVAL-TPAAAREVDVIGIFRYRS---  315 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~---  315 (366)
                      ++.+.+.+..  .+.++|++|||+|+. .+..++++|+++|+++.+|..... ..++. ..+..+++++.+++....   
T Consensus       218 ~~~~~~~~~~--~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  294 (354)
T 2j8z_A          218 DFSEATLKFT--KGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNK  294 (354)
T ss_dssp             CHHHHHHHHT--TTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHH
T ss_pred             HHHHHHHHHh--cCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEccccccc
Confidence            6666665543  246899999999976 788899999999999999875532 34455 567788999999865421   


Q ss_pred             --------ChHHHHHHHHCC-CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          316 --------TWPLCIEFLRSG-KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       316 --------~~~~~~~~l~~g-~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                              .++++++++++| ++.+.+.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       295 ~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          295 YKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPV--TEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             HHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             ccHHHHHHHHHHHHHHHHcCCCccccCccceEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence                    123578889999 33337889999999  99999999999988889999874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.5e-48  Score=361.18  Aligned_cols=317  Identities=16%  Similarity=0.179  Sum_probs=256.4

Q ss_pred             cccceEEEEeeCCc----eEEEEecCCCCC--CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCC---------
Q 017793           12 KNQNMAAWLLGIKT----LKIQPYHLPTLG--PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP---------   76 (366)
Q Consensus        12 ~~~~~~~~~~~~~~----~~~~~~~~p~~~--~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p---------   76 (366)
                      +++||++++.+++.    ++++++|.|+|+  +|||+|||.++|||++|++++.|.+..       ...+|         
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-------~~~~P~~~~~~~p~   73 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS-------KPAKTTGFGTTEPA   73 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC-------CCCCBSTTCCSSCB
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC-------CCCCCccccccCcc
Confidence            35689999987753    899999988877  999999999999999999999854211       12234         


Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCC
Q 017793           77 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD  156 (366)
Q Consensus        77 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~  156 (366)
                      .++|||++|+|+++|+++++|++||||++.+                           ...|+|+||++++++.++++|+
T Consensus        74 ~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~  126 (364)
T 1gu7_A           74 APCGNEGLFEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPN  126 (364)
T ss_dssp             EECCSCCEEEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECC
T ss_pred             cccCceeEEEEEEeCCCCCcCCCCCEEEecC---------------------------CCCCcchheEecCHHHeEEcCC
Confidence            8999999999999999999999999998642                           1369999999999999999998


Q ss_pred             -----------CCCccccccch-hhHHHHHHHHh-CCCCCC-CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChh--
Q 017793          157 -----------NVSLEEGAMCE-PLSVGVHACRR-ANVGPE-TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQ--  219 (366)
Q Consensus       157 -----------~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~-~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~--  219 (366)
                                 ++++++||+++ ++.|||+++.+ +++++| ++|||+|+ |++|++++|+||..|+ +++++.++.+  
T Consensus       127 ~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~  205 (364)
T 1gu7_A          127 PAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNL  205 (364)
T ss_dssp             HHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTH
T ss_pred             ccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCcccc
Confidence                       89999999886 78899999977 689999 99999995 9999999999999999 5666655444  


Q ss_pred             --HHHHHHHcCCceeeecCCC-CcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-Ccee
Q 017793          220 --RLSIARNLGADETAKVSTD-IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTV  295 (366)
Q Consensus       220 --~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~  295 (366)
                        +.++++++|++.++++... ..++.+.++++....++++|+||||+|+.... .++++|+++|+++.+|.... ...+
T Consensus       206 ~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~  284 (364)
T 1gu7_A          206 DEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNNGLMLTYGGMSFQPVTI  284 (364)
T ss_dssp             HHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTTCEEEECCCCSSCCEEE
T ss_pred             HHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccCCEEEEecCCCCCCccc
Confidence              3678899999999886421 13566666655411267899999999977544 88899999999999986543 3345


Q ss_pred             echHhhhcCcEEEEeecc----------CCChHHHHHHHHCCCCCCCCceEEEecC-ChhhHHHHHHHHHcCCCceEEEe
Q 017793          296 ALTPAAAREVDVIGIFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGF-TQKEIEDAFEISAQGGNAIKVMF  364 (366)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l-~~~~~~~a~~~~~~~~~~gkvvi  364 (366)
                      +...+..+++++.+++..          .+.++++++++++|++.+.+..  ++++ .++++++|++.+.++...||+|+
T Consensus       285 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvv  362 (364)
T 1gu7_A          285 PTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSI--ETLYDGTKPLHELYQDGVANSKDGKQLI  362 (364)
T ss_dssp             CHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCE--EEECCSSSCHHHHHHHHHHTGGGSCEEE
T ss_pred             CHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccce--EEecCchhhHHHHHHHHHhCCCCceEEE
Confidence            555677899999987643          2468899999999999665554  4555 23799999999999888999999


Q ss_pred             eC
Q 017793          365 NL  366 (366)
Q Consensus       365 ~~  366 (366)
                      ++
T Consensus       363 ~~  364 (364)
T 1gu7_A          363 TY  364 (364)
T ss_dssp             EC
T ss_pred             eC
Confidence            75

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.8e-47  Score=351.15  Aligned_cols=310  Identities=24%  Similarity=0.316  Sum_probs=257.7

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.++   +.+++++.|.|+|++|||+|||.++|||++|++++.|.+..     .....+|.++|||++|+|+++|
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-----~~~~~~p~i~G~e~~G~V~~vG   76 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHP-----LVVGEPPIVVGFEAAAVVEEVG   76 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC---------------CCEECCCEEEEEEEEEC
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCC-----CCCCCCCccccceeEEEEEEEC
Confidence            788888854   46999999999999999999999999999999988842100     0003478999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc--cccch-h
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE--GAMCE-P  168 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~--aa~~~-~  168 (366)
                      +++++|++||||++.+                           ...|+|+||++++++.++++|+++++++  ||+++ +
T Consensus        77 ~~v~~~~~GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~  129 (333)
T 1wly_A           77 PGVTDFTVGERVCTCL---------------------------PPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLK  129 (333)
T ss_dssp             TTCCSCCTTCEEEECS---------------------------SSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEec---------------------------CCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhh
Confidence            9999999999997531                           0269999999999999999999999999  66665 8


Q ss_pred             hHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHH
Q 017793          169 LSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       169 ~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  246 (366)
                      +.|||+++. .+++++|++|||+| +|++|++++|+++..|+ +|+++++++++.+.++++|++.++++..  .++.+.+
T Consensus       130 ~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~i  206 (333)
T 1wly_A          130 GMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVV  206 (333)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHH
T ss_pred             HHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--HHHHHHH
Confidence            999999996 68999999999999 59999999999999999 7999999999999999999998887643  4666666


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-Cceeech-HhhhcC--cEEEEeecc--------C
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALT-PAAARE--VDVIGIFRY--------R  314 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~~~~~~~~--------~  314 (366)
                      .+..  .+.++|++|||+|+ ..++.++++|+++|+++.+|.... ...++.. .++.++  +++.+++..        .
T Consensus       207 ~~~~--~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  283 (333)
T 1wly_A          207 REIT--GGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEID  283 (333)
T ss_dssp             HHHH--TTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHH
T ss_pred             HHHh--CCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHH
Confidence            5543  25689999999998 588999999999999999987653 2344555 566777  888876431        1


Q ss_pred             CChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       315 ~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +.++++++++++|++  ++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       284 ~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          284 EGSKCLFDAVKAGVL--HSSVAKTFPL--REAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             HHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCSCCSEEEEET
T ss_pred             HHHHHHHHHHHCCCc--CCCcceEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            357889999999999  6778899999  99999999999988899999874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=3.6e-48  Score=354.55  Aligned_cols=306  Identities=16%  Similarity=0.177  Sum_probs=255.7

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.+++   .++++++|.|+|++|||+|||+++|||++|++++.|.+       .....+|.++|||++|+|+++|
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~-------~~~~~~p~v~G~E~~G~V~~~G   73 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKG-------KIIRHFPMIPGIDFAGTVHASE   73 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCT-------TCCCSSSBCCCSEEEEEEEEES
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCC-------CCCCCCCccccceeEEEEEEeC
Confidence            7899999774   48999999999999999999999999999999998532       1124679999999999999998


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                        +++|++||||++.+.         .            . +...+|+|+||++++++.++++|+++++++||+++ .+.
T Consensus        74 --v~~~~vGdrV~~~~~---------~------------~-g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  129 (324)
T 3nx4_A           74 --DPRFHAGQEVLLTGW---------G------------V-GENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGF  129 (324)
T ss_dssp             --STTCCTTCEEEEECT---------T------------B-TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred             --CCCCCCCCEEEEccc---------c------------c-CCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHH
Confidence              678999999997531         0            0 12357999999999999999999999999999886 677


Q ss_pred             HHHHHH---HhCCCCCCC-EEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793          171 VGVHAC---RRANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  245 (366)
Q Consensus       171 ~a~~~l---~~~~~~~~~-~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  245 (366)
                      |||+++   .+.++++++ +|||+|+ |++|++++|+|+..|+ +|++++++++|.++++++|++.++++....  .   
T Consensus       130 ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~---  203 (324)
T 3nx4_A          130 TAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFA--E---  203 (324)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSS--C---
T ss_pred             HHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHH--H---
Confidence            888776   456677743 4999995 9999999999999999 799999999999999999999999875422  1   


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-------CCCh
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-------RSTW  317 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~  317 (366)
                      ++++   .++++|++|||+|++ .++.++++|+++|+++.+|..... ..++...+..+++++.+++..       .+.+
T Consensus       204 ~~~~---~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  279 (324)
T 3nx4_A          204 SRPL---EKQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAW  279 (324)
T ss_dssp             CCSS---CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHH
T ss_pred             HHhh---cCCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHH
Confidence            2222   356899999999976 899999999999999999976543 455666788899999998653       2457


Q ss_pred             HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       318 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++++++|++  ++. +++|+|  +++++|++.+.+++..||+|+++
T Consensus       280 ~~~~~l~~~g~l--~~~-~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          280 ARLVKDLPESFY--AQA-ATEITL--ADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             HHHHHHSCHHHH--HHH-EEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHcCCC--CCC-ceeEeH--HHHHHHHHHHHhCCCCceEEEec
Confidence            888899999988  455 899999  99999999999999999999975

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.3e-47  Score=348.53  Aligned_cols=307  Identities=22%  Similarity=0.228  Sum_probs=257.1

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ||++++.++   +.++++++|.|+|++|||+|||.++|||++|++++.|.+        ....+|.++|||++|+|+++|
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~--------~~~~~p~v~G~E~~G~V~~vG   73 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLY--------PPPSLPSGLGTEAAGIVSKVG   73 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSS--------CCSSSSBCCCSCEEEEEEEEC
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCC--------CCCCCCCCCCceeEEEEEEEC
Confidence            788888754   468999999999999999999999999999999988432        113478999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~  170 (366)
                      +++++|++||||.. +.                          ..+|+|+||++++++.++++|+++++++||++. ++.
T Consensus        74 ~~v~~~~~GdrV~~-~g--------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~  126 (327)
T 1qor_A           74 SGVKHIKAGDRVVY-AQ--------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGL  126 (327)
T ss_dssp             TTCCSCCTTCEEEE-SC--------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEE-CC--------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHH
Confidence            99999999999942 10                          135999999999999999999999999987664 899


Q ss_pred             HHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793          171 VGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       171 ~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      |||+++. .+++++|++|||+| +|++|++++|+++..|+ +|+++++++++.+.++++|++.++++..  .++.+.+.+
T Consensus       127 ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~  203 (327)
T 1qor_A          127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE--EDLVERLKE  203 (327)
T ss_dssp             HHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHH
T ss_pred             HHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--ccHHHHHHH
Confidence            9999996 68999999999999 69999999999999999 7999999999999999999998887643  456565554


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhc-CcEEEEeec---------cCCCh
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAR-EVDVIGIFR---------YRSTW  317 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~~~~~~~---------~~~~~  317 (366)
                      ..  .+.++|++|||+| ...++.++++|+++|+++.+|..... ..++...+..+ .+.+.+...         ..+.+
T Consensus       204 ~~--~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (327)
T 1qor_A          204 IT--GGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEAS  280 (327)
T ss_dssp             HT--TTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHH
T ss_pred             Hh--CCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHH
Confidence            43  2458999999999 56889999999999999999876542 34555556666 777765432         13457


Q ss_pred             HHHHHHHHCCCCCCCCceE--EEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          318 PLCIEFLRSGKIDVKPLIT--HRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       318 ~~~~~~l~~g~~~~~~~~~--~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++++++++|++  ++.++  ++|+|  +++++|++.+++++..||+|+++
T Consensus       281 ~~~~~l~~~g~l--~~~i~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          281 NELFSLIASGVI--KVDVAEQQKYPL--KDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHHTTSS--CCCCCGGGEEEG--GGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHCCCc--ccccccCcEEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            889999999999  55677  89999  99999999999998899999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=6.1e-47  Score=351.05  Aligned_cols=309  Identities=21%  Similarity=0.257  Sum_probs=255.6

Q ss_pred             CcccceEEEEeeCC-----ceEE-EEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCccccccee
Q 017793           11 DKNQNMAAWLLGIK-----TLKI-QPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECA   84 (366)
Q Consensus        11 ~~~~~~~~~~~~~~-----~~~~-~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~   84 (366)
                      ++++||++++.++.     .+++ +++|.|+|++|||+|||.|+|||++|++++.|.+.       ....+|+++|||++
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-------~~~~~P~i~G~E~~   92 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYD-------PSVKPPFDIGFEGI   92 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTC-------TTCCSCEECCSEEE
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCC-------CCCCCCCCCCceeE
Confidence            46779999998763     5889 99999999999999999999999999999885321       11357999999999


Q ss_pred             EEEEEeCCCCC-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcccc
Q 017793           85 GIIEEVGSEVK-SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG  163 (366)
Q Consensus        85 G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~a  163 (366)
                      |+|+++|++|+ +|++||||+..                             ..|+|+||++++++.++++|+. +.+.|
T Consensus        93 G~V~~vG~~V~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~P~~-~~~aa  142 (362)
T 2c0c_A           93 GEVVALGLSASARYTVGQAVAYM-----------------------------APGSFAEYTVVPASIATPVPSV-KPEYL  142 (362)
T ss_dssp             EEEEEECTTGGGTCCTTCEEEEE-----------------------------CSCCSBSEEEEEGGGCEECSSS-CHHHH
T ss_pred             EEEEEECCCccCCCCCCCEEEEc-----------------------------cCCcceeEEEEcHHHeEECCCC-chHhh
Confidence            99999999999 99999999863                             2699999999999999999996 44544


Q ss_pred             ccchhhHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcc
Q 017793          164 AMCEPLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED  241 (366)
Q Consensus       164 a~~~~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~  241 (366)
                      +...++.|||+++. .+++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .+
T Consensus       143 al~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~  219 (362)
T 2c0c_A          143 TLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKT--EP  219 (362)
T ss_dssp             TTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--SC
T ss_pred             cccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC--hh
Confidence            44458899999995 57899999999999 69999999999999999 7999999999999999999999888653  45


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-----------eeechHhhhcCcEEEEe
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-----------TVALTPAAAREVDVIGI  310 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~  310 (366)
                      +.+.+++.   .+.++|++|||+|+ ..++.++++|+++|+++.+|......           .+ ...++.+++++.++
T Consensus       220 ~~~~~~~~---~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~  294 (362)
T 2c0c_A          220 VGTVLKQE---YPEGVDVVYESVGG-AMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGF  294 (362)
T ss_dssp             HHHHHHHH---CTTCEEEEEECSCT-HHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEEC
T ss_pred             HHHHHHHh---cCCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEE
Confidence            65555543   35689999999997 48899999999999999998653211           11 13567788999987


Q ss_pred             ecc------CCChHHHHHHHHCCCCCCCCc------eEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          311 FRY------RSTWPLCIEFLRSGKIDVKPL------ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       311 ~~~------~~~~~~~~~~l~~g~~~~~~~------~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +..      .+.++++++++++|++.+...      +.+.|+|  +++++|++.+.+++..||+|+++
T Consensus       295 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          295 FLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGL--ESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             CGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBST--THHHHHHHHHHTTCCSBEEEEEC
T ss_pred             EhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCH--HHHHHHHHHHHcCCCCceEEEEc
Confidence            643      346889999999999954322      2355788  99999999999988899999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2e-46  Score=344.61  Aligned_cols=301  Identities=18%  Similarity=0.159  Sum_probs=253.1

Q ss_pred             ccceEEEEe-------eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccc---
Q 017793           13 NQNMAAWLL-------GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHE---   82 (366)
Q Consensus        13 ~~~~~~~~~-------~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e---   82 (366)
                      ++||+.++.       +++.++++++|.|+|++|||+|||+++|||++|++.+.+         .....+|.++|||   
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~---------~~~~~~p~~~G~e~g~   76 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMND---------ARSYIPPVGIGEVMRA   76 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSC---------SCCSSCCCCTTSBCCC
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhc---------ccccCCCCCCCcccCC
Confidence            557888886       357899999999999999999999999999999987762         2223456666766   


Q ss_pred             -eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcc
Q 017793           83 -CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE  161 (366)
Q Consensus        83 -~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~  161 (366)
                       ++|+|++.  ++++|++||||+.                               .|+|+||++++++.++++|+++++.
T Consensus        77 ~~~G~V~~~--~v~~~~vGdrV~~-------------------------------~G~~aey~~v~~~~~~~~P~~~~~~  123 (336)
T 4b7c_A           77 LGVGKVLVS--KHPGFQAGDYVNG-------------------------------ALGVQDYFIGEPKGFYKVDPSRAPL  123 (336)
T ss_dssp             EEEEEEEEE--CSTTCCTTCEEEE-------------------------------ECCSBSEEEECCTTCEEECTTTSCG
T ss_pred             ceEEEEEec--CCCCCCCCCEEec-------------------------------cCCceEEEEechHHeEEcCCCCCch
Confidence             89999994  5889999999984                               4899999999999999999999777


Q ss_pred             cc--ccc-hhhHHHHHHH-HhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeec
Q 017793          162 EG--AMC-EPLSVGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKV  235 (366)
Q Consensus       162 ~a--a~~-~~~~~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~  235 (366)
                      ++  +.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.+ +++|++.++++
T Consensus       124 ~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~  202 (336)
T 4b7c_A          124 PRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDY  202 (336)
T ss_dssp             GGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEET
T ss_pred             HHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEEC
Confidence            65  444 4889999999 6789999999999995 9999999999999999 899999999999999 89999998886


Q ss_pred             CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC----C---ceeechHhhhcCcEEE
Q 017793          236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT----E---MTVALTPAAAREVDVI  308 (366)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~---~~~~~~~~~~~~~~~~  308 (366)
                      ..  .++.+.+.++.   ++++|++|||+|+ ..+..++++|+++|+++.+|....    .   ..++...++.+++++.
T Consensus       203 ~~--~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~  276 (336)
T 4b7c_A          203 KN--EDLAAGLKREC---PKGIDVFFDNVGG-EILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARME  276 (336)
T ss_dssp             TT--SCHHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEE
T ss_pred             CC--HHHHHHHHHhc---CCCceEEEECCCc-chHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEE
Confidence            44  56666666553   5689999999996 588999999999999999986542    1   2344556788999999


Q ss_pred             EeeccC------CChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          309 GIFRYR------STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       309 ~~~~~~------~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++.+.      +.++++++++++|++  ++.+...++|  +++++|++.+.+++..||+|+++
T Consensus       277 g~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          277 GMVVMDYAQRFPEGLKEMATWLAEGKL--QSREDIVEGL--ETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             ECCGGGGGGGHHHHHHHHHHHHHTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEhhhhhhhhHHHHHHHHHHHHCCCc--ccceeeecCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            987652      568899999999999  4555556788  99999999999999999999985

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.9e-46  Score=349.56  Aligned_cols=321  Identities=21%  Similarity=0.254  Sum_probs=252.9

Q ss_pred             ccCCcccceEEEEeeC---CceEE-EEecCCCC-CCCcEEEEEeeeeeccchhhhhhhccccc---c---c-ccCccCCC
Q 017793            8 DEGDKNQNMAAWLLGI---KTLKI-QPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLST---M---R-CANFIVKK   75 (366)
Q Consensus         8 ~~~~~~~~~~~~~~~~---~~~~~-~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~---~---~-~~~~~~~~   75 (366)
                      ++.++++||++++.++   ..+++ +++|.|+| ++|||+|||.|+|||++|++++.|.....   .   . .......+
T Consensus        15 ~~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~   94 (375)
T 2vn8_A           15 TENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEF   94 (375)
T ss_dssp             ---CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTC
T ss_pred             ccccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccC
Confidence            4556778999888865   46889 89999985 99999999999999999999988642110   0   0 00011237


Q ss_pred             CcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECC
Q 017793           76 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP  155 (366)
Q Consensus        76 p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P  155 (366)
                      |.++|||++|+|+++|++|++|++||||++.+.                         ....|+|+||++++++.++++|
T Consensus        95 P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP  149 (375)
T 2vn8_A           95 PLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP-------------------------PWKQGTLSEFVVVSGNEVSHKP  149 (375)
T ss_dssp             SBCCCCEEEEEEEEECTTCCSCCTTCEEEEECC-------------------------TTSCCSSBSEEEEEGGGEEECC
T ss_pred             CcccceeeeEEEEEeCCCCCCCCCCCEEEEecC-------------------------CCCCccceeEEEEcHHHeeeCC
Confidence            899999999999999999999999999987421                         1237999999999999999999


Q ss_pred             CCCCccccccch-hhHHHHHHHH-hCC----CCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017793          156 DNVSLEEGAMCE-PLSVGVHACR-RAN----VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG  228 (366)
Q Consensus       156 ~~~~~~~aa~~~-~~~~a~~~l~-~~~----~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg  228 (366)
                      +++++++||+++ .+.|||+++. .++    +++|++|||+| +|++|++++|+|+..|+ +|++++ ++++.++++++|
T Consensus       150 ~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lG  227 (375)
T 2vn8_A          150 KSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLG  227 (375)
T ss_dssp             TTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTT
T ss_pred             CCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcC
Confidence            999999999887 6789999994 678    89999999999 79999999999999999 788887 678899999999


Q ss_pred             CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEcccCCCc-e---eec------
Q 017793          229 ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGLAKTEM-T---VAL------  297 (366)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~-~---~~~------  297 (366)
                      ++.++++..  +++.+.+.+     ..++|++|||+|+. ..+..++++++++|+++.+|...... .   .+.      
T Consensus       228 a~~v~~~~~--~~~~~~~~~-----~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~  300 (375)
T 2vn8_A          228 ADDVIDYKS--GSVEEQLKS-----LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTG  300 (375)
T ss_dssp             CSEEEETTS--SCHHHHHHT-----SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHH
T ss_pred             CCEEEECCc--hHHHHHHhh-----cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheee
Confidence            999988653  455544432     35899999999987 55688889999999999998643210 0   000      


Q ss_pred             hHhhh-------cCcEEEEeecc--CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          298 TPAAA-------REVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       298 ~~~~~-------~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ..+..       +...+.+....  .+.++++++++++|++  ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       301 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          301 VTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI--RPVIEQTFPF--SKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             hhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCc--ccCcCeEECH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            01111       34455443322  3457899999999998  6788899999  99999999999998889999974

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=2.2e-47  Score=350.15  Aligned_cols=313  Identities=19%  Similarity=0.262  Sum_probs=251.9

Q ss_pred             CcccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793           11 DKNQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus        11 ~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      |+++||++++.+++   .++++++|.|+|++|||+|||.++|||++|++++.|.+       .....+|.++|||++|+|
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~-------~~~~~~p~i~G~E~~G~V   73 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGG-------NIVREYPLILGIDAAGTV   73 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTC-------TTCSSCSEECCSEEEEEE
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCC-------CCcCCCCccccceEEEEE
Confidence            56779999998764   78999999999999999999999999999999888531       112357899999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE  167 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~  167 (366)
                      +++  ++++|++||||++.+..                     ++ ...+|+|+||++++++.++++|+++++++||+++
T Consensus        74 ~~~--~v~~~~vGdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~  129 (330)
T 1tt7_A           74 VSS--NDPRFAEGDEVIATSYE---------------------LG-VSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYG  129 (330)
T ss_dssp             EEC--SSTTCCTTCEEEEESTT---------------------BT-TTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHH
T ss_pred             EEc--CCCCCCCCCEEEEcccc---------------------cC-CCCCccceeEEEecHHHeEECCCCCCHHHHhhcc
Confidence            996  46889999999874210                     01 1247999999999999999999999999999886


Q ss_pred             -hhHHHHHHH---HhCCCCCCC-EEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcc
Q 017793          168 -PLSVGVHAC---RRANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED  241 (366)
Q Consensus       168 -~~~~a~~~l---~~~~~~~~~-~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~  241 (366)
                       .+.|||.++   ++.++++|+ +|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++....  
T Consensus       130 ~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~--  206 (330)
T 1tt7_A          130 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY--  206 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC--
T ss_pred             chHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCch--
Confidence             566777665   457899997 9999995 9999999999999999 588888999999999999999988763210  


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-------
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------  313 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------  313 (366)
                       .+.++++   .+.++|++|||+|++ .+..++++++++|+++.+|.... ...++...++.+++++.+++..       
T Consensus       207 -~~~~~~~---~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  281 (330)
T 1tt7_A          207 -DGTLKAL---SKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVR  281 (330)
T ss_dssp             -SSCCCSS---CCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHH
T ss_pred             -HHHHHHh---hcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHH
Confidence             1111111   245799999999984 88999999999999999997654 3345555677889999987432       


Q ss_pred             CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       314 ~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .+.++++.+++++|++  ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       282 ~~~~~~~~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          282 AAVWERMSSDLKPDQL--LTIVDREVSL--EETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHHHHHTTTTSCCSCS--TTSEEEEECS--TTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHHHHHhcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            1234555666667777  6788899999  99999999999998899999974

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4e-46  Score=341.53  Aligned_cols=309  Identities=19%  Similarity=0.225  Sum_probs=245.2

Q ss_pred             ccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           13 NQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        13 ~~~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      ++||++++.+++   .++++++|.|+|++|||+|||.++|||++|++++.|..       .....+|.++|||++|+|++
T Consensus         2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~-------~~~~~~p~v~G~E~~G~V~~   74 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDG-------KIVKTYPFVPGIDLAGVVVS   74 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGG-------SSCCSSSBCCCSEEEEEEEE
T ss_pred             CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCC-------CCCCCCCcccCcceEEEEEe
Confidence            358999998775   68899999999999999999999999999999888532       11235789999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~  168 (366)
                      +  ++++|++||||++.+..                     ++ ....|+|+||++++++.++++|+++++++||+++ .
T Consensus        75 ~--~v~~~~vGdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~  130 (328)
T 1xa0_A           75 S--QHPRFREGDEVIATGYE---------------------IG-VTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTA  130 (328)
T ss_dssp             C--CSSSCCTTCEEEEESTT---------------------BT-TTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHH
T ss_pred             c--CCCCCCCCCEEEEcccc---------------------CC-CCCCccceeEEEechHHeEECCCCCCHHHhhhhhhh
Confidence            5  57889999999874210                     01 1247999999999999999999999999999886 5


Q ss_pred             hHHHHHHH---HhCCCCCCC-EEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchH
Q 017793          169 LSVGVHAC---RRANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  243 (366)
Q Consensus       169 ~~~a~~~l---~~~~~~~~~-~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  243 (366)
                      +.|||.++   ++.++++|+ +|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++...  + .
T Consensus       131 ~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~--~-~  206 (328)
T 1xa0_A          131 GFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDV--M-A  206 (328)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC-------
T ss_pred             HHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCc--H-H
Confidence            66777665   457899997 9999995 9999999999999999 68888899999999999999998886432  1 2


Q ss_pred             HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc--C-----C
Q 017793          244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY--R-----S  315 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-----~  315 (366)
                      +.++++   .+.++|++|||+|+. .+..++++++++|+++.+|.... ...++...++.+++++.++...  .     +
T Consensus       207 ~~~~~~---~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  282 (328)
T 1xa0_A          207 ERIRPL---DKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLR  282 (328)
T ss_dssp             -----C---CSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHH
T ss_pred             HHHHHh---cCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHH
Confidence            222222   245899999999985 78999999999999999987553 2344555677889999987432  1     2


Q ss_pred             ChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       316 ~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      .++++.++++++ +  ++ ++++|+|  +++++|++.+++++..||+|+++
T Consensus       283 ~~~~~~~~~~~g-l--~~-~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          283 IWERLAGDLKPD-L--ER-IAQEISL--AELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             HHHHHHTTTCCC-H--HH-HEEEEEG--GGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHHHHHcC-C--ce-eeeEeCH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            345555566666 5  44 3689999  99999999999998899999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=7.9e-47  Score=352.24  Aligned_cols=313  Identities=17%  Similarity=0.193  Sum_probs=249.6

Q ss_pred             ccceEEEEe-eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccc--ccc-------------------C
Q 017793           13 NQNMAAWLL-GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM--RCA-------------------N   70 (366)
Q Consensus        13 ~~~~~~~~~-~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~--~~~-------------------~   70 (366)
                      .+||+++.. ++..++++++|.|+|++|||||||.++|||++|++++.|......  ..|                   .
T Consensus         6 ~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~   85 (379)
T 3iup_A            6 LQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMA   85 (379)
T ss_dssp             EEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHG
T ss_pred             hhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccc
Confidence            456777664 446799999999999999999999999999999999986421000  000                   0


Q ss_pred             ccCCCCcccccceeEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC
Q 017793           71 FIVKKPMVIGHECAGIIEEVGSEV-KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK  149 (366)
Q Consensus        71 ~~~~~p~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~  149 (366)
                      ....+|.++|||++|+|+++|++| ++|++||||++.                             ..|+|+||++++++
T Consensus        86 ~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~~  136 (379)
T 3iup_A           86 GRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI-----------------------------GGAMYSQYRCIPAD  136 (379)
T ss_dssp             GGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC-----------------------------CSCCSBSEEEEEGG
T ss_pred             cccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec-----------------------------CCCcceeEEEeCHH
Confidence            124578999999999999999999 889999999863                             35999999999999


Q ss_pred             ceEECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEE--CCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017793          150 LCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIM--GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  226 (366)
Q Consensus       150 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~--G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  226 (366)
                      .++++|+++++++||+++ ...|||++++... ++|++|||+  |+|++|++++|+|+..|+ +|++++++++|.+++++
T Consensus       137 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~~~  214 (379)
T 3iup_A          137 QCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLLKA  214 (379)
T ss_dssp             GEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHHHHHHH
T ss_pred             HeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHh
Confidence            999999999999999765 6778898887665 899999999  579999999999999999 68888899999999999


Q ss_pred             cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhc-----CC-----------ceEEEEcccC
Q 017793          227 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR-----PG-----------GKVCLIGLAK  290 (366)
Q Consensus       227 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~~~  290 (366)
                      +|++.++++..  +++.+.++++..  +.++|++|||+|++...+.++++|+     ++           |+++.+|...
T Consensus       215 lGa~~~~~~~~--~~~~~~v~~~t~--~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~  290 (379)
T 3iup_A          215 QGAVHVCNAAS--PTFMQDLTEALV--STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLD  290 (379)
T ss_dssp             TTCSCEEETTS--TTHHHHHHHHHH--HHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSE
T ss_pred             CCCcEEEeCCC--hHHHHHHHHHhc--CCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCC
Confidence            99999988643  677777777653  5689999999998777788888884     55           4555544322


Q ss_pred             CCceeechHhhhcCcEEEEeecc-------C----CChHHHHHHHHCCCCCCCCceEEEecCChhhH--HHHHHHHHcCC
Q 017793          291 TEMTVALTPAAAREVDVIGIFRY-------R----STWPLCIEFLRSGKIDVKPLITHRFGFTQKEI--EDAFEISAQGG  357 (366)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~--~~a~~~~~~~~  357 (366)
                      . ...+....+.+++++.+++..       .    +.++++++++.+ .+  .+.++++|+|  +++  ++|++.+.+++
T Consensus       291 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l--~~~i~~~~~l--~~~~~~~A~~~l~~~~  364 (379)
T 3iup_A          291 T-SPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TF--ASHYSKEISL--AEVLDLDMIAVYNKRA  364 (379)
T ss_dssp             E-EEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TT--CCCCSEEEEH--HHHTCHHHHHHHTTCC
T ss_pred             C-CccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cC--CCcceEEecH--HHhhhHHHHHHHhcCC
Confidence            1 223344456678888887542       1    234556666666 34  7788899999  999  99999999999


Q ss_pred             CceEEEeeC
Q 017793          358 NAIKVMFNL  366 (366)
Q Consensus       358 ~~gkvvi~~  366 (366)
                      ..||+|++.
T Consensus       365 ~~gKvVv~~  373 (379)
T 3iup_A          365 TGEKYLINP  373 (379)
T ss_dssp             TTCCEEEET
T ss_pred             CCceEEEeC
Confidence            999999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=7.4e-45  Score=336.84  Aligned_cols=312  Identities=18%  Similarity=0.188  Sum_probs=253.6

Q ss_pred             CCcccceEEEE-eeC--------CceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCccc
Q 017793           10 GDKNQNMAAWL-LGI--------KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI   79 (366)
Q Consensus        10 ~~~~~~~~~~~-~~~--------~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~   79 (366)
                      .+|++||++++ ..+        +.++++++|.|+| ++|||+|||.++|||++|++.+.+..  + .....+..+|.++
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~--g-~~~~~~~~~p~v~   80 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT--G-TDYITPWQLSQVV   80 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSC--S-SSSSCCCCBTSBC
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccc--c-ccccCCCCCCccc
Confidence            46788999999 444        5699999999999 99999999999999999998766310  0 0001124578999


Q ss_pred             ccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCC-
Q 017793           80 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV-  158 (366)
Q Consensus        80 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~-  158 (366)
                      |||++|+|++  +++++|++||||++.                              .|+|+||++++++.++++|+++ 
T Consensus        81 G~E~~G~V~~--~~v~~~~vGdrV~~~------------------------------~G~~aey~~v~~~~~~~iP~~~~  128 (357)
T 2zb4_A           81 DGGGIGIIEE--SKHTNLTKGDFVTSF------------------------------YWPWQTKVILDGNSLEKVDPQLV  128 (357)
T ss_dssp             EEEEEEEEEE--ECSTTCCTTCEEEEE------------------------------EEESBSEEEEEGGGCEECCGGGG
T ss_pred             cccEEEEEEe--cCCCCCCCCCEEEec------------------------------CCCcEEEEEEchHHceecCcccc
Confidence            9999999999  889999999999852                              4899999999999999999999 


Q ss_pred             ----CccccccchhhHHHHHHH-HhCCCCCC--CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC
Q 017793          159 ----SLEEGAMCEPLSVGVHAC-RRANVGPE--TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGA  229 (366)
Q Consensus       159 ----~~~~aa~~~~~~~a~~~l-~~~~~~~~--~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~  229 (366)
                          +++.|+...++.|||+++ +.+++++|  ++|||+|+ |++|++++|+++..|+.+|+++++++++.+.+++ +|+
T Consensus       129 ~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~  208 (357)
T 2zb4_A          129 DGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF  208 (357)
T ss_dssp             TTCGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC
T ss_pred             cCchhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC
Confidence                666555556899999999 67899999  99999995 9999999999999999678888899999998887 999


Q ss_pred             ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeec---------hH
Q 017793          230 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVAL---------TP  299 (366)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~---------~~  299 (366)
                      +.++++..  .++.+.+.+..   ++++|++|||+|+ ..++.++++|+++|+++.+|..... ..++.         ..
T Consensus       209 ~~~~d~~~--~~~~~~~~~~~---~~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~  282 (357)
T 2zb4_A          209 DAAINYKK--DNVAEQLRESC---PAGVDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAI  282 (357)
T ss_dssp             SEEEETTT--SCHHHHHHHHC---TTCEEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHH
T ss_pred             ceEEecCc--hHHHHHHHHhc---CCCCCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhh
Confidence            98888643  46666665543   3389999999996 5889999999999999999865321 12221         35


Q ss_pred             hhhcCcEEEEeecc------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          300 AAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       300 ~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++.+++++.++...      .+.++++++++++|++.+  .+...|+|  +++++|++.+.+++..||+|+++
T Consensus       283 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          283 QKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKI--KETVINGL--ENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             HHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCC--CEEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcC--ccceecCH--HHHHHHHHHHHcCCCCceEEEEE
Confidence            67788999987643      345889999999999954  44566888  99999999999998899999874

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.3e-43  Score=320.95  Aligned_cols=289  Identities=24%  Similarity=0.347  Sum_probs=239.2

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||++++.+++ ...+++.|.|+|++|||+|||.++|||++|++++.|.+.       ....+|.++|||++|+|+     
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~~~p~i~G~e~~G~V~-----   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYL-------TRLHPPFIPGMEVVGVVE-----   68 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-------SCCCSSBCCCCEEEEEET-----
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC-------CCCCCCCcccceEEEEEE-----
Confidence            6788888774 345679999999999999999999999999999885321       113579999999999997     


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  172 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a  172 (366)
                            ||||+..                            ..+|+|+||++++++.++++|+++++++||+++ ++.||
T Consensus        69 ------GdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  114 (302)
T 1iz0_A           69 ------GRRYAAL----------------------------VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTA  114 (302)
T ss_dssp             ------TEEEEEE----------------------------CSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHH
T ss_pred             ------CcEEEEe----------------------------cCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHH
Confidence                  9999864                            136999999999999999999999999988775 89999


Q ss_pred             HHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          173 VHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       173 ~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      |+++. .+ +++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++... .++.+   .+ 
T Consensus       115 ~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~-~~~~~---~~-  187 (302)
T 1iz0_A          115 YLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEV-PERAK---AW-  187 (302)
T ss_dssp             HHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGH-HHHHH---HT-
T ss_pred             HHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcc-hhHHH---Hh-
Confidence            99996 57 999999999995 9999999999999999 89999999999999999999988875320 12222   11 


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-----CCChHHHHH--
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-----RSTWPLCIE--  322 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--  322 (366)
                          .++|++|| +|+ ..++.++++++++|+++.+|..... ..++...++.+++++.++...     .+.++++++  
T Consensus       188 ----~~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  261 (302)
T 1iz0_A          188 ----GGLDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFL  261 (302)
T ss_dssp             ----TSEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHH
T ss_pred             ----cCceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhh
Confidence                57999999 997 5889999999999999999865542 245556677889999998642     456888999  


Q ss_pred             -HHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          323 -FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       323 -~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                       ++++|++  ++.++++|++  +++++|++.+.+++..||+++++
T Consensus       262 ~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          262 LPRLGREL--RPVVGPVFPF--AEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             GGGBTTTB--CCCEEEEEEG--GGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             HHHHcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence             9999998  6788899999  99999999999988899999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2.3e-42  Score=318.72  Aligned_cols=310  Identities=15%  Similarity=0.144  Sum_probs=247.8

Q ss_pred             CcccceEEEEe-----eCC--ceEEE--EecCCC-CCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccc
Q 017793           11 DKNQNMAAWLL-----GIK--TLKIQ--PYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIG   80 (366)
Q Consensus        11 ~~~~~~~~~~~-----~~~--~~~~~--~~~~p~-~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G   80 (366)
                      ||++||+++..     +|.  .++++  ++|.|. |++|||||||.++|+|+.|. ...|.....    .....+|+++|
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~----~~~~~~p~v~G   75 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPS----TAALAQAYTPG   75 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC-------------CCCCTT
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCC----ccccCCCcCCC
Confidence            56667777665     344  68898  888886 89999999999999998875 444221000    00024689999


Q ss_pred             cceeEEEEE--eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCc--eEECCC
Q 017793           81 HECAGIIEE--VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYKLPD  156 (366)
Q Consensus        81 ~e~~G~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~--~~~~P~  156 (366)
                      ||++|++++  +|+++++|++||||+.                               .|+|+||++++++.  ++++|+
T Consensus        76 ~e~~G~~~~GvV~~~v~~~~vGdrV~~-------------------------------~g~~aey~~v~~~~~~~~~ip~  124 (345)
T 2j3h_A           76 QPIQGYGVSRIIESGHPDYKKGDLLWG-------------------------------IVAWEEYSVITPMTHAHFKIQH  124 (345)
T ss_dssp             SBCEEEEEEEEEEECSTTCCTTCEEEE-------------------------------EEESBSEEEECCCTTTCEEECC
T ss_pred             CeeecceEEEEEecCCCCCCCCCEEEe-------------------------------ecCceeEEEecccccceeecCC
Confidence            999999999  9999999999999984                               37899999999876  999996


Q ss_pred             ---CCCccccccchhhHHHHHHH-HhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc
Q 017793          157 ---NVSLEEGAMCEPLSVGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGAD  230 (366)
Q Consensus       157 ---~~~~~~aa~~~~~~~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~  230 (366)
                         +++++.|+...++.|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++ ++|++
T Consensus       125 ~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~  203 (345)
T 2j3h_A          125 TDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFD  203 (345)
T ss_dssp             CSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCS
T ss_pred             CCCCHHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCc
Confidence               45666544445889999999 5689999999999995 9999999999999999 7999999999999998 79999


Q ss_pred             eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC------CceeechHhhhcC
Q 017793          231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT------EMTVALTPAAARE  304 (366)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~  304 (366)
                      .++++.. ..++.+.++++.   ++++|++||++|+ ..++.++++|+++|+++.+|....      ...++...++.++
T Consensus       204 ~~~d~~~-~~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~  278 (345)
T 2j3h_A          204 DAFNYKE-ESDLTAALKRCF---PNGIDIYFENVGG-KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKR  278 (345)
T ss_dssp             EEEETTS-CSCSHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHT
T ss_pred             eEEecCC-HHHHHHHHHHHh---CCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhc
Confidence            8887643 235666665542   4689999999997 588999999999999999986542      2234455678889


Q ss_pred             cEEEEeeccC--C----ChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          305 VDVIGIFRYR--S----TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       305 ~~~~~~~~~~--~----~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      +++.+++.+.  .    .++++++++++|++  ++.+.+.|+|  +++++|++.+++++..||+|+++
T Consensus       279 ~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          279 NRIQGFVVSDFYDKYSKFLEFVLPHIREGKI--TYVEDVADGL--EKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             CEEEECCGGGGGGGHHHHHHHHHHHHHTTSS--CCCEEEEESG--GGSHHHHHHHHTTCCSSEEEEES
T ss_pred             eeeceeeehhhhhhHHHHHHHHHHHHHCCCC--cCcccccCCH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            9999876542  2    38889999999999  5667678899  99999999999999999999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.7e-41  Score=311.43  Aligned_cols=299  Identities=17%  Similarity=0.193  Sum_probs=243.2

Q ss_pred             ccceEEEEeeC-------CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeE
Q 017793           13 NQNMAAWLLGI-------KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG   85 (366)
Q Consensus        13 ~~~~~~~~~~~-------~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G   85 (366)
                      ++||+.++.+.       +.++++++|.|+|++|||+|||.++|||+.|... .           .+..+|.++|||++|
T Consensus         6 ~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~-----------~~~~~p~~~g~e~~G   73 (333)
T 1v3u_A            6 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S-----------KRLKEGAVMMGQQVA   73 (333)
T ss_dssp             CEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T-----------TTCCTTSBCCCCEEE
T ss_pred             ccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c-----------CcCCCCcccccceEE
Confidence            45888888752       5699999999999999999999999999988721 1           124568899999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCC----CCcc
Q 017793           86 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN----VSLE  161 (366)
Q Consensus        86 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~----~~~~  161 (366)
                      +|++.  ++++|++||||++                               .|+|+||++++.+.++++|++    ++++
T Consensus        74 ~Vv~~--~v~~~~vGdrV~~-------------------------------~g~~aey~~v~~~~~~~iP~~~~~~~~~~  120 (333)
T 1v3u_A           74 RVVES--KNSAFPAGSIVLA-------------------------------QSGWTTHFISDGKGLEKLLTEWPDKLPLS  120 (333)
T ss_dssp             EEEEE--SCTTSCTTCEEEE-------------------------------CCCSBSEEEESSTTEEECC--CCTTSCGG
T ss_pred             EEEec--CCCCCCCCCEEEe-------------------------------cCceEEEEEechHHeEEcCcccccCCCHH
Confidence            99995  6789999999984                               488999999999999999997    8887


Q ss_pred             cc-ccc-hhhHHHHHHH-HhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          162 EG-AMC-EPLSVGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       162 ~a-a~~-~~~~~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      ++ +++ .+++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++++..
T Consensus       121 ~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~  199 (333)
T 1v3u_A          121 LALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT  199 (333)
T ss_dssp             GGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCC
Confidence            63 444 5889999999 5688999999999995 9999999999999999 7899989999999999999988887642


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-------ceeechHhhhcCcEEEEe
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-------MTVALTPAAAREVDVIGI  310 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~~~~~  310 (366)
                       ..++.+.+.+..   ++++|++||++|+. .++.++++|+++|+++.+|.....       ...+...++.+++++.++
T Consensus       200 -~~~~~~~~~~~~---~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~  274 (333)
T 1v3u_A          200 -VNSLEEALKKAS---PDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGF  274 (333)
T ss_dssp             -CSCHHHHHHHHC---TTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEEC
T ss_pred             -HHHHHHHHHHHh---CCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEE
Confidence             245666665543   35899999999964 788999999999999999865431       112445677899999998


Q ss_pred             ecc-------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          311 FRY-------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       311 ~~~-------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ..+       .+.++++++++++|++.+.  ....++|  +++++|++.+++++..||+|+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          275 IVYRWQGDVREKALRDLMKWVLEGKIQYH--EHVTKGF--ENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             CGGGCCTHHHHHHHHHHHHHHHTTSSCCC--EEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ehhhcchHHHHHHHHHHHHHHHCCCccCc--cccccCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            653       2356789999999999544  4445788  99999999999998899999975

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.5e-43  Score=354.87  Aligned_cols=290  Identities=18%  Similarity=0.264  Sum_probs=241.5

Q ss_pred             CceEEEEecC--CCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017793           24 KTLKIQPYHL--PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD  101 (366)
Q Consensus        24 ~~~~~~~~~~--p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd  101 (366)
                      +.+++++.|.  |+|++|||+|||+++|||++|++++.|.         +  ..|.++|||++|+|+++|++|++|++||
T Consensus       222 ~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~---------~--~~~~~lG~E~aG~V~~vG~~V~~~~vGD  290 (795)
T 3slk_A          222 DGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGM---------Y--PGVASLGSEGAGVVVETGPGVTGLAPGD  290 (795)
T ss_dssp             TTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTC---------C--SSCCCSCCCEEEEEEEECSSCCSSCTTC
T ss_pred             cceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCC---------C--CCCccccceeEEEEEEeCCCCCcCCCCC
Confidence            6789988764  5789999999999999999999988842         2  2456799999999999999999999999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHH-HhC
Q 017793          102 RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRA  179 (366)
Q Consensus       102 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~  179 (366)
                      ||+..                             ..|+|+||++++.+.++++|+++++++||+++ .+.|||+++ +.+
T Consensus       291 rV~~~-----------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a  341 (795)
T 3slk_A          291 RVMGM-----------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLA  341 (795)
T ss_dssp             EEEEC-----------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCT
T ss_pred             EEEEE-----------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHh
Confidence            99863                             36999999999999999999999999999987 688999988 568


Q ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          180 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       180 ~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++++|++|||+| +|++|++++|+||..|+ +|+++++++ +.++++ +|++.++++.  ..++.+.+.+..  .++|+|
T Consensus       342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~--~~~~~~~i~~~t--~g~GvD  414 (795)
T 3slk_A          342 GLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSR--TCDFEQQFLGAT--GGRGVD  414 (795)
T ss_dssp             CCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSS--SSTHHHHHHHHS--CSSCCS
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecC--ChhHHHHHHHHc--CCCCeE
Confidence            999999999999 59999999999999999 678886655 556665 9999888754  367877776553  477999


Q ss_pred             EEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-------CCChHHHHHHHHCCCCCC
Q 017793          259 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDV  331 (366)
Q Consensus       259 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~g~~~~  331 (366)
                      +|||++|++ .++.++++|+++|+++.+|........... ...+++++.+....       .+.++++++++++|++  
T Consensus       415 vVld~~gg~-~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l--  490 (795)
T 3slk_A          415 VVLNSLAGE-FADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVL--  490 (795)
T ss_dssp             EEEECCCTT-TTHHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSC--
T ss_pred             EEEECCCcH-HHHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCc--
Confidence            999999975 789999999999999999865543222211 22355566554321       3568899999999999  


Q ss_pred             CCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          332 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       332 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                      ++.+.++|++  +++++||+.+.+++..||+|+++
T Consensus       491 ~p~~~~~~~l--~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          491 EPLPVTAWDV--RQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             CCCCEEEEEG--GGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             CCCcceeEcH--HHHHHHHHHHhcCCccceEEEec
Confidence            6678899999  99999999999999999999974

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.98  E-value=2.2e-31  Score=293.86  Aligned_cols=294  Identities=20%  Similarity=0.241  Sum_probs=231.5

Q ss_pred             CceEEEEecCCC-C--CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017793           24 KTLKIQPYHLPT-L--GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG  100 (366)
Q Consensus        24 ~~~~~~~~~~p~-~--~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G  100 (366)
                      +.+.+.+.+... +  .++||+|||.|+|+|+.|+.+..|.......++ .....|.++|+|++|+|          .+|
T Consensus      1542 ~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~-~~~~~~~~lG~E~aG~V----------~vG 1610 (2512)
T 2vz8_A         1542 SSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPG-KWLTRDCMLGMEFSGRD----------ASG 1610 (2512)
T ss_dssp             TSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCS-CCSCSSSCCCCEEEEEE----------TTS
T ss_pred             CceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccc-cccccCCceEEEEEEEE----------ccC
Confidence            567888766543 3  379999999999999999999986542211111 11235778999999997          379


Q ss_pred             CEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHH-Hh
Q 017793          101 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RR  178 (366)
Q Consensus       101 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~  178 (366)
                      |+|+..                            ...|+|+||++++++.++++|+++++++||+++ .+.|||+++ +.
T Consensus      1611 drV~g~----------------------------~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~ 1662 (2512)
T 2vz8_A         1611 RRVMGM----------------------------VPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVR 1662 (2512)
T ss_dssp             CCEEEE----------------------------CSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTT
T ss_pred             CEEEEe----------------------------ecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHH
Confidence            999863                            235899999999999999999999999999987 788999998 56


Q ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +++++|++|||+| +|++|++++|+||..|+ +|+++++++++.+++++    +|++.++++..  .++.+.+.+..  .
T Consensus      1663 a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~--~~~~~~i~~~t--~ 1737 (2512)
T 2vz8_A         1663 GRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSRD--TSFEQHVLRHT--A 1737 (2512)
T ss_dssp             TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESSS--SHHHHHHHHTT--T
T ss_pred             hcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCCC--HHHHHHHHHhc--C
Confidence            8899999999997 69999999999999999 78888899999999886    78888887543  56666665443  4


Q ss_pred             CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc------CCChHHHHHHH--
Q 017793          254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY------RSTWPLCIEFL--  324 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l--  324 (366)
                      +.|+|+||||++ .+.+..++++|+++|+++.+|..... ........+.+++++.+....      ...++++++++  
T Consensus      1738 g~GvDvVld~~g-~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~ 1816 (2512)
T 2vz8_A         1738 GKGVDLVLNSLA-EEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKA 1816 (2512)
T ss_dssp             SCCEEEEEECCC-HHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHH
T ss_pred             CCCceEEEECCC-chHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHH
Confidence            678999999998 56899999999999999999854321 112223456678888887542      23455555554  


Q ss_pred             --HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793          325 --RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  366 (366)
Q Consensus       325 --~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~  366 (366)
                        .+|.+  .+.++++|++  +++++|++.+.+++..||+|+++
T Consensus      1817 ~~~~g~l--~p~i~~~f~l--~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1817 GIQEGVV--QPLKCTVFPR--TKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             HHTTTCS--CCCCEEEEES--STHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHcCCc--CCCcceEecH--HHHHHHHHhhhccCccceEEEEC
Confidence              46666  6778899999  99999999999999999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.83  E-value=2.7e-20  Score=157.40  Aligned_cols=177  Identities=20%  Similarity=0.339  Sum_probs=129.4

Q ss_pred             CceEECCCCCCccccccch-hhHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017793          149 KLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR  225 (366)
Q Consensus       149 ~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  225 (366)
                      +.++++|+++++++||.++ ++.|||+++. ..++++|++|||+| +|++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999885 8999999995 47899999999999 69999999999999999 7888989999998999


Q ss_pred             HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhhhc
Q 017793          226 NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAR  303 (366)
Q Consensus       226 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~  303 (366)
                      ++|++.++++..  .++.+.+.+..  .+.++|+++|++|. ..+..++++|+++|+++.+|....  ...++.. .+.+
T Consensus        81 ~~g~~~~~d~~~--~~~~~~~~~~~--~~~~~D~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS--VDFADEILELT--DGYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC--STHHHHHHHHT--TTCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc--HHHHHHHHHHh--CCCCCeEEEECCch-HHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999988777543  45555554432  24579999999985 588999999999999999986542  2233332 3457


Q ss_pred             CcEEEEeec------c----CCChHHHHHHHHCCCCCCC
Q 017793          304 EVDVIGIFR------Y----RSTWPLCIEFLRSGKIDVK  332 (366)
Q Consensus       304 ~~~~~~~~~------~----~~~~~~~~~~l~~g~~~~~  332 (366)
                      ++++.+...      .    .+.++++++++++|++++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            777775421      1    3568899999999999544

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.20  E-value=4.4e-11  Score=104.12  Aligned_cols=168  Identities=11%  Similarity=0.081  Sum_probs=112.1

Q ss_pred             CCCCCEEEEcC-------CcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcc------cc
Q 017793           97 LEVGDRVALEP-------GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE------EG  163 (366)
Q Consensus        97 ~~~Gd~V~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~------~a  163 (366)
                      +++||+|++.+       ...||.|.+|..|....|+...     ...|+..      +...++.|+.....      .+
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g-----~~~G~~~------~~~~~~~p~~~~~~~~~~~~~~   72 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIG-----KPEGVKI------NGFEVYRPTLEEIILLGFERKT   72 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTT-----CCTTEEE------TTEEEECCCHHHHHHHTSCCSS
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcC-----CCCCCEE------EEEEEeCCCHHHHHHhcCcCCC
Confidence            89999999988       6678888888888777776431     1233322      34444444432222      11


Q ss_pred             ccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CC-ceeeecCCC
Q 017793          164 AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GA-DETAKVSTD  238 (366)
Q Consensus       164 a~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~  238 (366)
                      +.+.+ ..+...+....++++++||.+|+| .|..++.+++. +. ++++++.+++..+.+++.    +. +.+..... 
T Consensus        73 ~~~~~-~~~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-  147 (248)
T 2yvl_A           73 QIIYP-KDSFYIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-  147 (248)
T ss_dssp             CCCCH-HHHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-
T ss_pred             Ccccc-hhHHHHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-
Confidence            22222 233355677788999999999998 59999999998 65 899999999988877663    43 22211111 


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ++.+..  .   ...++|+|+.+.+.+ ..+..+.+.|+++|+++...
T Consensus       148 --d~~~~~--~---~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  190 (248)
T 2yvl_A          148 --DFKDAE--V---PEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL  190 (248)
T ss_dssp             --CTTTSC--C---CTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred             --Chhhcc--c---CCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence              111110  0   135799999988766 67889999999999998764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.98  E-value=3.4e-12  Score=119.14  Aligned_cols=182  Identities=16%  Similarity=0.250  Sum_probs=129.6

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCC
Q 017793           77 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD  156 (366)
Q Consensus        77 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~  156 (366)
                      ...|++.++.|.++|++++.+.+|+.++......      +             +......|++++|+......++.+|+
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~------~-------------~~~~~~~G~~~~~~~~~~~~a~~~~k  135 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKK------A-------------YDRAARLGTLDEALKIVFRRAINLGK  135 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH------H-------------HHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHH------H-------------HHHHHHcCCchHHHHHHHHHHhhhhc
Confidence            3478999999999999999999999873210000      0             00001246678888888888899999


Q ss_pred             CCCccccccchhhHHHHHHHHhCC----CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH-HHHHHcCCce
Q 017793          157 NVSLEEGAMCEPLSVGVHACRRAN----VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADE  231 (366)
Q Consensus       157 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~  231 (366)
                      +++.+.++...++++++.+++...    -.+|++|+|+|+|.+|.++++.++..|+.+|++++++.++. ++++++|++ 
T Consensus       136 ~v~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-  214 (404)
T 1gpj_A          136 RAREETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-  214 (404)
T ss_dssp             HHHHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-
T ss_pred             cCcchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-
Confidence            988887776567778887764322    25799999999999999999999999997899999998886 688889975 


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHH--HHHHh--h--cCCceEEEEcccC
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS--TALNA--T--RPGGKVCLIGLAK  290 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~~  290 (366)
                      ++++    .++    .+..    .++|+|++|++.+..+.  ..+..  +  ++++.++.++...
T Consensus       215 ~~~~----~~l----~~~l----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          215 AVRF----DEL----VDHL----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             ECCG----GGH----HHHH----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             eecH----HhH----HHHh----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence            3222    122    2222    36999999998653321  34454  4  5677777777543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.78  E-value=1e-08  Score=94.07  Aligned_cols=135  Identities=19%  Similarity=0.267  Sum_probs=92.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +++|+|+|+|++|.+++++++.+|+ +|+++++++++.+.++++++..+........+    +.+..    .++|+||+|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~DvVI~~  237 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAE----IETAV----AEADLLIGA  237 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHH----HHHHH----HTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHH----HHHHH----cCCCEEEEC
Confidence            4899999999999999999999999 89999999999999888775542111111112    22221    269999999


Q ss_pred             CCChHH------HHHHHHhhcCCceEEEEcccCC-------CceeechHhhhcCcEEEEeecc-------------CCCh
Q 017793          264 VGFDKT------MSTALNATRPGGKVCLIGLAKT-------EMTVALTPAAAREVDVIGIFRY-------------RSTW  317 (366)
Q Consensus       264 ~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~  317 (366)
                      ++.+..      ....++.++++|+++.++...+       ..+++...+..+++++.+...-             ...+
T Consensus       238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~  317 (361)
T 1pjc_A          238 VLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTL  317 (361)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHH
Confidence            987542      5667889999999999885432       1223333344566676664321             2335


Q ss_pred             HHHHHHHHCC
Q 017793          318 PLCIEFLRSG  327 (366)
Q Consensus       318 ~~~~~~l~~g  327 (366)
                      +.+++++++|
T Consensus       318 ~~l~~l~~~G  327 (361)
T 1pjc_A          318 PYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHG
T ss_pred             HHHHHHHhCC
Confidence            6677888776

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.60  E-value=1.6e-07  Score=86.83  Aligned_cols=142  Identities=17%  Similarity=0.234  Sum_probs=96.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCC-----CC--------cc----hHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVST-----DI--------ED----VDT  244 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~-----~~--------~~----~~~  244 (366)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|+++++++++.+.++++|++.+ ++...     ..        ++    ...
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 69999999999888888998654 12210     00        00    111


Q ss_pred             HHHHHHHhhCCCCcEEEEcC---CChH--H-HHHHHHhhcCCceEEEEcccC-CCc--eeechHhhhcCcEEEEeeccCC
Q 017793          245 DVGKIQNAMGSGIDVSFDCV---GFDK--T-MSTALNATRPGGKVCLIGLAK-TEM--TVALTPAAAREVDVIGIFRYRS  315 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~  315 (366)
                      .+.+..    .++|+|++|+   |.+.  . ....++.|++++.++.++... +..  ..+...+..+.+++.+....+.
T Consensus       250 ~l~~~~----~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~  325 (384)
T 1l7d_A          250 AVLKEL----VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPS  325 (384)
T ss_dssp             HHHHHH----TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGG
T ss_pred             HHHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcc
Confidence            133322    4799999999   4322  2 266788999999999988532 221  1122234567788888765543


Q ss_pred             C-hHHHHHHHHCCCC
Q 017793          316 T-WPLCIEFLRSGKI  329 (366)
Q Consensus       316 ~-~~~~~~~l~~g~~  329 (366)
                      . .+++.+++.++.+
T Consensus       326 ~~~~~a~~l~~~~~~  340 (384)
T 1l7d_A          326 RVAADASPLFAKNLL  340 (384)
T ss_dssp             GGHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhHH
Confidence            3 5668888887765

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.51  E-value=7.1e-07  Score=82.10  Aligned_cols=136  Identities=19%  Similarity=0.271  Sum_probs=85.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ++.+|+|+|+|.+|..+++.++..|+ +|+++++++++.+.+++ +|.+...+.. ...    .+.+..    .++|+++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~-~~~----~l~~~~----~~~DvVi  234 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTA-TEA----NIKKSV----QHADLLI  234 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEEC-CHH----HHHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecC-CHH----HHHHHH----hCCCEEE
Confidence            36899999999999999999999999 89999999998887766 7765323321 111    222222    2699999


Q ss_pred             EcCCChHH------HHHHHHhhcCCceEEEEcccCCC-------ceeechHhhhcCcEEEEeecc-------------CC
Q 017793          262 DCVGFDKT------MSTALNATRPGGKVCLIGLAKTE-------MTVALTPAAAREVDVIGIFRY-------------RS  315 (366)
Q Consensus       262 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~-------------~~  315 (366)
                      +|++.+..      ....++.|+++|.++.++...+.       .+.+...+..+++.+.+...-             ..
T Consensus       235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~  314 (369)
T 2eez_A          235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQ  314 (369)
T ss_dssp             ECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHH
T ss_pred             ECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHH
Confidence            99986532      56778899999999998754321       112222233455665554321             23


Q ss_pred             ChHHHHHHHHCCC
Q 017793          316 TWPLCIEFLRSGK  328 (366)
Q Consensus       316 ~~~~~~~~l~~g~  328 (366)
                      .++.+++++.+|.
T Consensus       315 ~~~~l~~l~~~g~  327 (369)
T 2eez_A          315 TLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCh
Confidence            3556667776663

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.50  E-value=4e-07  Score=84.45  Aligned_cols=140  Identities=15%  Similarity=0.189  Sum_probs=91.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC-------------Ccch----HHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-------------IEDV----DTD  245 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~~----~~~  245 (366)
                      ++.+|+|+|+|.+|+.++++|+.+|+ .|++++++.++.+.++++|++.+. ++..             ..++    ...
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECC-C--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEE-ecccccccccccchhhccHHHHHHHHHH
Confidence            58899999999999999999999999 799999999999988999986431 1110             0111    012


Q ss_pred             HHHHHHhhCCCCcEEEEcCCCh-----HH-HHHHHHhhcCCceEEEEccc-CCCceee--ch-HhhhcCcEEEEeeccCC
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFD-----KT-MSTALNATRPGGKVCLIGLA-KTEMTVA--LT-PAAAREVDVIGIFRYRS  315 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~~~~~--~~-~~~~~~~~~~~~~~~~~  315 (366)
                      +.++.    .++|+||++++.+     .. ....++.|++++.++.++.. ++..+..  .. .+..+++++.+....+.
T Consensus       249 l~e~~----~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~  324 (401)
T 1x13_A          249 FAAQA----KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPG  324 (401)
T ss_dssp             HHHHH----HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGG
T ss_pred             HHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcc
Confidence            22322    3699999995332     22 25678999999999999854 2222221  11 14567788887755433


Q ss_pred             Ch-HHHHHHHHCCC
Q 017793          316 TW-PLCIEFLRSGK  328 (366)
Q Consensus       316 ~~-~~~~~~l~~g~  328 (366)
                      .+ +++.+++.++.
T Consensus       325 ~~~~~a~~ll~~~~  338 (401)
T 1x13_A          325 RLPTQSSQLYGTNL  338 (401)
T ss_dssp             GSHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHhH
Confidence            33 33555555443

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.47  E-value=5.5e-07  Score=85.12  Aligned_cols=105  Identities=20%  Similarity=0.208  Sum_probs=83.7

Q ss_pred             hHHHHHHHHhC--CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHH
Q 017793          169 LSVGVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       169 ~~~a~~~l~~~--~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  246 (366)
                      ..++++++.+.  ...+|++|+|+|.|.+|..+++.++..|+ +|++++.++++.+.++++|++. .+       +.   
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~~-~~-------l~---  324 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFDV-VT-------VE---  324 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CC-------HH---
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCEE-ec-------HH---
Confidence            34456666543  37889999999999999999999999999 8999999999988889999852 11       11   


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHH-HHHHhhcCCceEEEEcccC
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  290 (366)
                       ++    -.++|+|++++++...+. ..++.|+++|+++.+|...
T Consensus       325 -e~----l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          325 -EA----IGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             -HH----GGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             -HH----HhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence             12    146999999999876565 7889999999999988654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.39  E-value=1.3e-06  Score=80.54  Aligned_cols=97  Identities=15%  Similarity=0.294  Sum_probs=74.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ++.+|+|+|+|.+|..+++.++..|+ +|+++++++++.+.+++ +|++...++.. ..    .+.++.    .++|+|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~----~l~~~l----~~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AY----ELEGAV----KRADLVI  236 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HH----HHHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HH----HHHHHH----cCCCEEE
Confidence            57899999999999999999999999 89999999999888776 77653222211 11    222222    2689999


Q ss_pred             EcCCChHH------HHHHHHhhcCCceEEEEccc
Q 017793          262 DCVGFDKT------MSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       262 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +|++.+..      ....++.|+++|.++.++..
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~  270 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAID  270 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGG
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCCcEEEEEecC
Confidence            99976643      56778899999999999843

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.27  E-value=2.4e-06  Score=75.37  Aligned_cols=104  Identities=16%  Similarity=0.229  Sum_probs=74.7

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc----CC-ceeeecCCCCcchHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GA-DETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~~~  247 (366)
                      ..+....++++++||-.|+|. |..++.+++..+ ...+++++.+++..+.+++.    +. +.+.....   ++.+.  
T Consensus       103 ~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~--  176 (277)
T 1o54_A          103 FIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR---DISEG--  176 (277)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC---CGGGC--
T ss_pred             HHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC---CHHHc--
Confidence            344667889999999999887 889999999864 34899999999988777653    54 22221112   22211  


Q ss_pred             HHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          248 KIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                       +   ....+|+|+...+.+ ..+..+.+.|+++|+++...
T Consensus       177 -~---~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          177 -F---DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             -C---SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             -c---cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence             1   135699999877655 57888999999999988764

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.18  E-value=1e-05  Score=71.21  Aligned_cols=99  Identities=15%  Similarity=0.303  Sum_probs=74.1

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .++++++++||.+|||+.|..++.+++..|+ +|++++.+++..+.+++.    |.+.+-....   +..+    +   .
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~g---Da~~----l---~  185 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITG---DETV----I---D  185 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEES---CGGG----G---G
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEC---chhh----C---C
Confidence            4788999999999999878888888988888 899999999988877653    5433322112   2211    1   1


Q ss_pred             CCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...||+|+.+...+   ..+..+.+.|+|||+++...
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~  222 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT  222 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence            46799999765543   57888999999999998764

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.11  E-value=1.3e-06  Score=68.98  Aligned_cols=107  Identities=10%  Similarity=0.134  Sum_probs=74.1

Q ss_pred             hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHH
Q 017793          168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~  246 (366)
                      ++++++.+++......+.+|+|+|+|.+|.+.++.++..|++ +++.++++++.+ ++++++.+.. .+    .++.+.+
T Consensus         5 ~~sv~~~a~~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~~-~~----~~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEYV-LI----NDIDSLI   78 (144)
T ss_dssp             CCSHHHHHHHHHHHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEEE-EC----SCHHHHH
T ss_pred             cccHHHHHHHHHHhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCceE-ee----cCHHHHh
Confidence            345666676554444589999999999999999988888985 888888888765 5677775322 21    2222221


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                              .++|+|+.|++...... ..+.+++++.++.++.+
T Consensus        79 --------~~~Divi~at~~~~~~~-~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           79 --------KNNDVIITATSSKTPIV-EERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             --------HTCSEEEECSCCSSCSB-CGGGCCTTCEEEECCSS
T ss_pred             --------cCCCEEEEeCCCCCcEe-eHHHcCCCCEEEEccCC
Confidence                    25899999998753221 22677888888877654

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=98.08  E-value=1.4e-05  Score=70.44  Aligned_cols=104  Identities=20%  Similarity=0.245  Sum_probs=73.2

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc-----C--CceeeecCCCCcchHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL-----G--ADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l-----g--~~~~~~~~~~~~~~~~~~  246 (366)
                      .+....++++++||.+|+| .|..++.+++..+ ...+++++.+++..+.+++.     |  .+.+.....   ++.+..
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~---d~~~~~  166 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLADSE  166 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGGCC
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC---chHhcC
Confidence            3456778999999999988 5889999999754 34899999999988777653     4  232221112   211110


Q ss_pred             HHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          247 GKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                        +   ....+|+|+.....+ ..+..+.+.|+++|+++.+.
T Consensus       167 --~---~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          167 --L---PDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             --C---CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             --C---CCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence              0   135699998876654 57888999999999988764

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.07  E-value=1.2e-05  Score=73.82  Aligned_cols=126  Identities=21%  Similarity=0.263  Sum_probs=83.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeee-------------cCC-CCcch----HH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK-------------VST-DIEDV----DT  244 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~-------------~~~-~~~~~----~~  244 (366)
                      ++.+|+|+|+|.+|+.++++++.+|+ .|++.+.++++.+.++++|++.+..             |.. -.+.+    ..
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            57999999999999999999999999 7999999999999999998753211             100 00011    11


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCChH------HHHHHHHhhcCCceEEEEccc-CCCcee--echHhhhcCcEEEEeecc
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGFDK------TMSTALNATRPGGKVCLIGLA-KTEMTV--ALTPAAAREVDVIGIFRY  313 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~~~------~~~~~~~~l~~~G~~v~~g~~-~~~~~~--~~~~~~~~~~~~~~~~~~  313 (366)
                      .+.+.    -.++|+||.|+..+.      .....++.+++++.++.++.. ++....  +...+..+.+.+.+...-
T Consensus       268 ~l~e~----l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nl  341 (405)
T 4dio_A          268 LVAEH----IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNV  341 (405)
T ss_dssp             HHHHH----HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSG
T ss_pred             HHHHH----hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCC
Confidence            22222    247999999964321      235788999999999998742 222111  111123456666666543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.00  E-value=2.5e-05  Score=71.07  Aligned_cols=104  Identities=18%  Similarity=0.245  Sum_probs=73.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC---Ccch---------HHHHHHHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD---IEDV---------DTDVGKIQ  250 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~---~~~~---------~~~~~~~~  250 (366)
                      ++.+|+|+|+|.+|..++++++.+|+ .|++.+++.++.+.++++|++.+. ...+   ...+         ......+.
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~-l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLD-LGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECC-CC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccchhhhhHHHHhhhHHHHH
Confidence            67999999999999999999999999 799999999999999999876431 1000   0000         01111111


Q ss_pred             HhhCCCCcEEEEcCCChH------HHHHHHHhhcCCceEEEEccc
Q 017793          251 NAMGSGIDVSFDCVGFDK------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      + .-..+|+||.++..+.      .....++.+++++.++.++..
T Consensus       261 e-~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d  304 (381)
T 3p2y_A          261 D-AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE  304 (381)
T ss_dssp             H-HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             H-HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence            1 1367999999863321      236788999999999998743

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.92  E-value=8.4e-05  Score=55.82  Aligned_cols=96  Identities=20%  Similarity=0.277  Sum_probs=64.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.+|+|+|+|.+|...++.+...|...|+++++++++.+.+...+..... .+-  .+. ..+.+.    -.++|+||+
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~--~~~-~~~~~~----~~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQ-VDA--KDE-AGLAKA----LGGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEE-CCT--TCH-HHHHHH----TTTCSEEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEE-ecC--CCH-HHHHHH----HcCCCEEEE
Confidence            356899999999999999999999933788899999988877766654322 111  121 233332    247999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEE
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +++..........+...+-+++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCCchhhHHHHHHHHHhCCCEEEe
Confidence            998664444444445555555443

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.83  E-value=1.8e-05  Score=69.28  Aligned_cols=94  Identities=19%  Similarity=0.160  Sum_probs=69.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +++.+||.+|+|. |..+..+++.. |. .+++++.+++..+.+++.+....+.. .+..++.     .   ..+.||+|
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-~d~~~~~-----~---~~~~fD~v  152 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCV-ASSHRLP-----F---SDTSMDAI  152 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEE-CCTTSCS-----B---CTTCEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEE-cchhhCC-----C---CCCceeEE
Confidence            6789999999988 99999999986 55 89999999999999888664322111 1111110     0   13579999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +.... ...+..+.+.|+++|+++...
T Consensus       153 ~~~~~-~~~l~~~~~~L~pgG~l~~~~  178 (269)
T 1p91_A          153 IRIYA-PCKAEELARVVKPGGWVITAT  178 (269)
T ss_dssp             EEESC-CCCHHHHHHHEEEEEEEEEEE
T ss_pred             EEeCC-hhhHHHHHHhcCCCcEEEEEE
Confidence            96544 557889999999999998764

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.80  E-value=7.2e-05  Score=59.57  Aligned_cols=91  Identities=13%  Similarity=0.101  Sum_probs=62.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ..++.+|+|+|+|.+|...++.++..|. .|+++++++++.+.++ +.|...+ ..+.  .+ ...+.   .....++|+
T Consensus        16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~-~~d~--~~-~~~l~---~~~~~~ad~   87 (155)
T 2g1u_A           16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTV-VGDA--AE-FETLK---ECGMEKADM   87 (155)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEE-ESCT--TS-HHHHH---TTTGGGCSE
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEE-EecC--CC-HHHHH---HcCcccCCE
Confidence            4578999999999999999999999998 7889999988877766 5665432 2111  12 12222   112357999


Q ss_pred             EEEcCCChHHHHHHHHhhcC
Q 017793          260 SFDCVGFDKTMSTALNATRP  279 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~  279 (366)
                      ||.+++.......+...++.
T Consensus        88 Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           88 VFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EEECSSCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHH
Confidence            99999987655555555543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.79  E-value=0.00018  Score=66.27  Aligned_cols=102  Identities=19%  Similarity=0.283  Sum_probs=77.1

Q ss_pred             HHHHHHh--CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          172 GVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       172 a~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .+.++.+  ...-.|.+++|+|.|.+|...++.++..|+ +|++++.++.+...+...|... .       +    +.++
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-------~----Leea  272 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-------K----LNEV  272 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------C----HHHH
T ss_pred             HHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-------c----HHHH
Confidence            3455543  334579999999999999999999999999 7999999888777676677532 1       1    2222


Q ss_pred             HHhhCCCCcEEEEcCCChHHHH-HHHHhhcCCceEEEEcccC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  290 (366)
                          -...|+++.|.|+...+. ..+..|++++.++.+|...
T Consensus       273 ----l~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          273 ----IRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             ----TTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             ----HhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence                246899999988765555 7789999999998887554

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.76  E-value=6.3e-05  Score=68.11  Aligned_cols=106  Identities=20%  Similarity=0.246  Sum_probs=69.5

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCC---------------ceeeecCCC
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGA---------------DETAKVSTD  238 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~---------------~~~~~~~~~  238 (366)
                      .+....++++++||-+|+|. |..++.+++..|. ..|++++.+++..+.+++...               +.+.....+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            44556789999999999887 8888899998764 489999999988877765211               122111121


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..+.   ...+.   ...||+|+-....+ ..+..+.+.|+++|+++.+.
T Consensus       176 ~~~~---~~~~~---~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~  219 (336)
T 2b25_A          176 ISGA---TEDIK---SLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  219 (336)
T ss_dssp             TTCC---C----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             hHHc---ccccC---CCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            1111   11111   24699998765544 35788889999999998764

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.71  E-value=0.00046  Score=57.58  Aligned_cols=102  Identities=15%  Similarity=0.113  Sum_probs=71.8

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~  249 (366)
                      .+....++++++||-+|||. |..++.+++. +. .|++++.+++..+.+++    +|.+ .+.....+..+   .+.  
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~~--  118 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA---ALA--  118 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG---GGT--
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh---hcc--
Confidence            44566788999999999987 8899999998 66 89999999998877654    4554 22222222111   111  


Q ss_pred             HHhhCCCCcEEEEcCCChH-HHHHHHHhhcCCceEEEEc
Q 017793          250 QNAMGSGIDVSFDCVGFDK-TMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~g  287 (366)
                         ....+|+|+...+... .+..+.+.|+++|+++...
T Consensus       119 ---~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          119 ---DLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             ---TSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ---cCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEe
Confidence               1246999997654332 6788889999999998754

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.68  E-value=0.00057  Score=56.83  Aligned_cols=104  Identities=14%  Similarity=0.134  Sum_probs=73.3

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      .+....++++++||-+|+|. |..++.+++......+++++.+++..+.+++    .+.+.+.....+..+   .+.   
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~---  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE---GLD---  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT---TCT---
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh---hhh---
Confidence            34667789999999999886 8899999998644589999999998877765    344322211121111   110   


Q ss_pred             HhhCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ....+|+|+.....   ...+..+.+.|+++|+++...
T Consensus       105 --~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          105 --DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             --TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             --cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence              12569999987652   457788899999999998764

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.68  E-value=0.00025  Score=62.81  Aligned_cols=96  Identities=15%  Similarity=0.182  Sum_probs=71.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      -.|.+|+|+|+|.+|..+++.++..|+ +|++.+++.++.+.++++|+..+ .+    .+    +.++    -...|+|+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~----~~----l~~~----l~~aDvVi  218 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HI----SK----AAQE----LRDVDVCI  218 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EG----GG----HHHH----TTTCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Ch----hh----HHHH----hcCCCEEE
Confidence            368999999999999999999999999 89999998888777777886532 11    11    2222    24799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                      .+++..-.-...+..+++++.++.++..+.
T Consensus       219 ~~~p~~~i~~~~l~~mk~~~~lin~ar~~~  248 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSHTFVIDLASKPG  248 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred             ECCChHHhCHHHHHhcCCCCEEEEecCCCC
Confidence            998753222356778999999988875443

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.54  E-value=0.00047  Score=55.79  Aligned_cols=103  Identities=16%  Similarity=0.213  Sum_probs=72.3

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +....++++++||.+|+|. |..++.+++..+...+++++.+++..+.+++    .+.+ .+ .+..+..   ..+   .
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~---~~~---~   89 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAP---RAF---D   89 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTT---GGG---G
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchH---hhh---h
Confidence            4556678999999999986 9999999998754489999999988887764    3544 33 2222211   111   1


Q ss_pred             HhhCCCCcEEEEcCCCh--HHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCVGFD--KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~--~~~~~~~~~l~~~G~~v~~g  287 (366)
                      . ....+|+|+......  ..+..+.+.|+++|+++...
T Consensus        90 ~-~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  127 (178)
T 3hm2_A           90 D-VPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANA  127 (178)
T ss_dssp             G-CCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEE
T ss_pred             c-cCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEe
Confidence            0 126799999765432  37889999999999998754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.52  E-value=0.00045  Score=61.41  Aligned_cols=97  Identities=14%  Similarity=0.177  Sum_probs=71.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      -.+.+++|+|+|.+|..+++.++..|+ +|++.+++.++.+.+.++|... +.+    .+    +.++    -..+|+|+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~----~~----l~~~----l~~aDvVi  220 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHT----DE----LKEH----VKDIDICI  220 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEG----GG----HHHH----STTCSEEE
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Ech----hh----HHHH----hhCCCEEE
Confidence            368999999999999999999999999 7999999988877777777642 221    11    2222    25799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTE  292 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  292 (366)
                      .+++..-.-...+..+++++.++.++..+..
T Consensus       221 ~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~  251 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPKTLILDLASRPGG  251 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTTCEEEECSSTTCS
T ss_pred             ECCChhhhCHHHHHhCCCCCEEEEEeCCCCC
Confidence            9998532223466788999999888764433

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.49  E-value=0.00024  Score=59.40  Aligned_cols=102  Identities=15%  Similarity=0.115  Sum_probs=70.6

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ..++...++++++||-+|+|. |..+..+++. +. .|++++.+++..+.+++    .+.+.+.....   +......  
T Consensus        68 ~~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~--  139 (210)
T 3lbf_A           68 RMTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHG---DGWQGWQ--  139 (210)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCCG--
T ss_pred             HHHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEEC---CcccCCc--
Confidence            344667788999999999885 8888899988 55 89999999988877765    34432211111   1111110  


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                         ....||+|+.+..-......+.+.|+++|+++..
T Consensus       140 ---~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~  173 (210)
T 3lbf_A          140 ---ARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLP  173 (210)
T ss_dssp             ---GGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEE
T ss_pred             ---cCCCccEEEEccchhhhhHHHHHhcccCcEEEEE
Confidence               1357999998765444455678999999998875

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.47  E-value=0.0002  Score=61.23  Aligned_cols=103  Identities=17%  Similarity=0.219  Sum_probs=71.5

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ..++...++++++||.+|+| .|..++.+++..+ ..|++++.+++..+.+++    .+.+.+.....   +....   +
T Consensus        82 ~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---~  153 (235)
T 1jg1_A           82 IMLEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILG---DGSKG---F  153 (235)
T ss_dssp             HHHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGC---C
T ss_pred             HHHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC---CcccC---C
Confidence            34455678899999999998 5999999999877 489999999988777765    44433211111   21111   1


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .  ...++|+|+.+..-......+.+.|+++|+++..
T Consensus       154 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~  188 (235)
T 1jg1_A          154 P--PKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  188 (235)
T ss_dssp             G--GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             C--CCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEE
Confidence            1  1245999998766554556788999999998765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.46  E-value=0.0016  Score=53.08  Aligned_cols=94  Identities=17%  Similarity=0.186  Sum_probs=64.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh-hCCCCcEEE
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-MGSGIDVSF  261 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~vl  261 (366)
                      +++|+|+|+|.+|...++.++.. |. .|++++.++++.+.+++.|...+.- +..  + .+.+   .+. .-.++|+|+
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~g-d~~--~-~~~l---~~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISG-DAT--D-PDFW---ERILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEEC-CTT--C-HHHH---HTBCSCCCCCEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEc-CCC--C-HHHH---HhccCCCCCCEEE
Confidence            67899999999999999999988 98 6889999999998888888764321 111  1 1112   221 245799999


Q ss_pred             EcCCChHHHHHHHHh---hcCCceEEE
Q 017793          262 DCVGFDKTMSTALNA---TRPGGKVCL  285 (366)
Q Consensus       262 d~~g~~~~~~~~~~~---l~~~G~~v~  285 (366)
                      .+++...........   +.+..+++.
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A          111 LAMPHHQGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             ECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             EeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence            999976544333333   344455554

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.43  E-value=0.003  Score=49.05  Aligned_cols=94  Identities=12%  Similarity=0.072  Sum_probs=65.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      .++++|.|+|.+|...++.++..|. .|++++.++++.+.+++.|...+.- +...+   ..+++   .+-..+|+++.+
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~g-d~~~~---~~l~~---a~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLG-NAANE---EIMQL---AHLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEES-CTTSH---HHHHH---TTGGGCSEEEEC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEEC-CCCCH---HHHHh---cCcccCCEEEEE
Confidence            4789999999999999999999998 7999999999999988888754321 11111   22222   223579999999


Q ss_pred             CCChHHHH---HHHHhhcCCceEEE
Q 017793          264 VGFDKTMS---TALNATRPGGKVCL  285 (366)
Q Consensus       264 ~g~~~~~~---~~~~~l~~~G~~v~  285 (366)
                      ++....-.   ...+.+.+..+++.
T Consensus        79 ~~~~~~n~~~~~~a~~~~~~~~iia  103 (140)
T 3fwz_A           79 IPNGYEAGEIVASARAKNPDIEIIA  103 (140)
T ss_dssp             CSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCeEEE
Confidence            99764222   23444556666554

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.42  E-value=0.00039  Score=65.20  Aligned_cols=91  Identities=21%  Similarity=0.265  Sum_probs=70.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      -.|.+++|.|+|++|...++.++..|+ +|++++.++.+...+...+++. .+       ..+    .    ...+|+++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~dv-~~-------lee----~----~~~aDvVi  325 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQV-LT-------LED----V----VSEADIFV  325 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CC-------GGG----T----TTTCSEEE
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCcc-CC-------HHH----H----HHhcCEEE
Confidence            478999999999999999999999999 7999999988887777777532 11       111    1    34699999


Q ss_pred             EcCCChHHHH-HHHHhhcCCceEEEEccc
Q 017793          262 DCVGFDKTMS-TALNATRPGGKVCLIGLA  289 (366)
Q Consensus       262 d~~g~~~~~~-~~~~~l~~~G~~v~~g~~  289 (366)
                      ++.|....+. ..+..+++++.++..|..
T Consensus       326 ~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          326 TTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             ECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             eCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            9998765443 377889999988888754

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.40  E-value=0.00071  Score=58.39  Aligned_cols=104  Identities=17%  Similarity=0.138  Sum_probs=74.5

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc-----CCceeeecCCCCcchHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL-----GADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~~  248 (366)
                      .+....++++++||..|+|. |..++.+++..| ...+++++.+++..+.+++.     |.+.+.....   ++.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG---KLEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES---CGGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC---chhhc--C
Confidence            44667789999999999886 899999999864 34899999999988877664     5333222111   21111  0


Q ss_pred             HHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          249 IQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +   ....+|+|+...+.. ..+..+.+.|+++|+++.+.
T Consensus       162 ~---~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          162 L---EEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             C---CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             C---CCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            1   135699999877655 57888999999999998764

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.38  E-value=0.00038  Score=58.36  Aligned_cols=105  Identities=16%  Similarity=0.194  Sum_probs=72.2

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~  248 (366)
                      ..++...++++++||.+|+|. |..+..+++..|. ..+++++.+++..+.+++.    +.+.+.....   +.....  
T Consensus        68 ~~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~--  141 (215)
T 2yxe_A           68 MMCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG---DGTLGY--  141 (215)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES---CGGGCC--
T ss_pred             HHHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccCC--
Confidence            344566788999999999984 9999999998762 3899999999887777653    4332211111   111111  


Q ss_pred             HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                       .  ....+|+|+.+..-....+.+.+.|+++|+++..-
T Consensus       142 -~--~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          142 -E--PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             -G--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             -C--CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence             0  13579999987665544567889999999988753

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.36  E-value=0.0018  Score=59.83  Aligned_cols=101  Identities=20%  Similarity=0.186  Sum_probs=74.6

Q ss_pred             HHHHHh--CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          173 VHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       173 ~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +.++.+  ...-.|.+++|+|.|.+|...++.++..|+ +|++++.++.+...+...|... .       ++    .++.
T Consensus       234 vdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v-------~L----eElL  300 (464)
T 3n58_A          234 VDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V-------TL----DDAA  300 (464)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C-------CH----HHHG
T ss_pred             HHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c-------cH----HHHH
Confidence            444433  334579999999999999999999999999 7999988887766666666532 1       12    2221


Q ss_pred             HhhCCCCcEEEEcCCChHHH-HHHHHhhcCCceEEEEcccC
Q 017793          251 NAMGSGIDVSFDCVGFDKTM-STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  290 (366)
                          ...|+++.+.++...+ ...+..|++++.++-+|...
T Consensus       301 ----~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          301 ----STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             ----GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             ----hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence                3689999998876443 46778999999998887543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.24  E-value=0.0022  Score=55.87  Aligned_cols=104  Identities=27%  Similarity=0.318  Sum_probs=71.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+ .++++|....   .|. ++..+..+.+.+..+.. +++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-G~i  104 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADS-ANLAELDRLYEKVKAEA-GRI  104 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCT-TCHHHHHHHHHHHHHHH-SCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecC-CCHHHHHHHHHHHHHHc-CCC
Confidence            578899998 68999998888888999 7888888888765 4566765422   222 23334444444444332 479


Q ss_pred             cEEEEcCCCh-------------------------HHHHHHHHhhcCCceEEEEccc
Q 017793          258 DVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       258 d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      |+++++.|..                         ...+..+..|+++|+++.++..
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~  161 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST  161 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence            9999998763                         1334455677788998888643

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.24  E-value=0.0017  Score=55.95  Aligned_cols=103  Identities=20%  Similarity=0.275  Sum_probs=74.3

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc----CCce-eeecCCCCcchHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADE-TAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~~~~  248 (366)
                      .+....++++++||-.|+|. |..++.+++..+ ...+++++.+++..+.+++.    |.+. +.....   ++...   
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~---  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK---DIYEG---  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS---CGGGC---
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC---chhhc---
Confidence            34567889999999999887 889999999853 44899999999888777653    5433 222222   22211   


Q ss_pred             HHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          249 IQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +   ....+|+|+...+.+ ..+..+.+.|+++|+++.+.
T Consensus       158 ~---~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          158 I---EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             C---CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             c---CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            1   145699999877764 37888999999999998763

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.23  E-value=0.0013  Score=60.71  Aligned_cols=91  Identities=24%  Similarity=0.304  Sum_probs=69.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .-.|.+|+|+|.|.+|...++.++..|+ +|++++.++.+...+...|....        +    +.++    -...|++
T Consensus       208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------s----L~ea----l~~ADVV  270 (436)
T 3h9u_A          208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------L----VEDV----VEEAHIF  270 (436)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------C----HHHH----TTTCSEE
T ss_pred             cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec--------C----HHHH----HhhCCEE
Confidence            3468999999999999999999999999 79999999888777777775321        1    2222    2468999


Q ss_pred             EEcCCChHHHH-HHHHhhcCCceEEEEcc
Q 017793          261 FDCVGFDKTMS-TALNATRPGGKVCLIGL  288 (366)
Q Consensus       261 ld~~g~~~~~~-~~~~~l~~~G~~v~~g~  288 (366)
                      +.+.++...+. ..+..|+++..++.++.
T Consensus       271 ilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          271 VTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             EECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             EECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence            99888654443 56678899988877763

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.19  E-value=0.0015  Score=53.63  Aligned_cols=100  Identities=20%  Similarity=0.260  Sum_probs=62.8

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCC---------CeEEEEcCChhHHHHHHHcCCceeeecCCCCcc--hHHHHH
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGA---------PRIIITDVDVQRLSIARNLGADETAKVSTDIED--VDTDVG  247 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~---------~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~--~~~~~~  247 (366)
                      ..++++++||.+|+|. |..++.+++..|.         ..|++++.++...     +..-..+. ..+..+  ....+.
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~-~~d~~~~~~~~~~~   90 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLC-PADVTDPRTSQRIL   90 (196)
T ss_dssp             CCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEEC-SCCTTSHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEE-eccCCCHHHHHHHH
Confidence            3478999999999988 9999999999874         4899999887431     11111110 111111  111111


Q ss_pred             HHHHhhCCCCcEEEE-----cCCCh------------HHHHHHHHhhcCCceEEEEc
Q 017793          248 KIQNAMGSGIDVSFD-----CVGFD------------KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       248 ~~~~~~~~~~d~vld-----~~g~~------------~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..  ..+..||+|+.     +.+..            ..+..+.+.|+++|+++...
T Consensus        91 ~~--~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           91 EV--LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HH--SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             Hh--cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            11  12347999995     33321            35667888999999998753

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.19  E-value=0.0015  Score=55.38  Aligned_cols=106  Identities=14%  Similarity=0.116  Sum_probs=71.6

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCc--eeeecCCCCcchHHHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +++...++||++||=+|||. |..+..+|+..|- .+|++++.+++..+.+++.-..  .+.....+..+... ..    
T Consensus        69 gl~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~-~~----  142 (233)
T 4df3_A           69 GLIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK-YR----  142 (233)
T ss_dssp             TCSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG-GT----
T ss_pred             chhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc-cc----
Confidence            34557799999999999887 8999999999875 4799999999988777654221  12111111111111 10    


Q ss_pred             hhCCCCcEEEEcCCCh----HHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFDCVGFD----KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~  286 (366)
                      .....+|+||..+..+    ..+..+.+.|+|+|+++..
T Consensus       143 ~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          143 HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            1135689988766544    2456677889999998864

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.18  E-value=0.0024  Score=56.97  Aligned_cols=100  Identities=13%  Similarity=0.242  Sum_probs=71.0

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      +...++++++||-+|||. |..+..+++..|+ .|++++.+++..+.+++.    |....+.+..  .++..    +   
T Consensus        84 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~----~---  152 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWED----F---  152 (318)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGGG----C---
T ss_pred             HhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CChHH----C---
Confidence            456788999999999987 8889999988788 899999999988877654    3321111111  12211    1   


Q ss_pred             hCCCCcEEEEc-----CCC---hHHHHHHHHhhcCCceEEEEcc
Q 017793          253 MGSGIDVSFDC-----VGF---DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       253 ~~~~~d~vld~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                       .+.+|+|+..     ++.   ...+..+.+.|+|+|+++....
T Consensus       153 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          153 -AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             -CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             -CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence             3579999876     432   3467788899999999987653

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=97.13  E-value=0.0012  Score=53.81  Aligned_cols=102  Identities=20%  Similarity=0.267  Sum_probs=67.3

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....++++++||-+|||. |..++.+++. +. .|++++.+++..+.+++    .+.+.+.....+..++.       ..
T Consensus        16 l~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~-------~~   85 (185)
T 3mti_A           16 LAEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD-------HY   85 (185)
T ss_dssp             HHTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG-------GT
T ss_pred             HHHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH-------hh
Confidence            345678999999999886 8888889887 65 89999999988777654    34433221111111111       11


Q ss_pred             hCCCCcEEEEcCCC-----------h----HHHHHHHHhhcCCceEEEEcc
Q 017793          253 MGSGIDVSFDCVGF-----------D----KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       253 ~~~~~d~vld~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ....||+|+-+.+.           .    ..+..+.+.|+|||+++.+..
T Consensus        86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            24569999766321           1    245777889999999987643

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.08  E-value=0.0051  Score=54.40  Aligned_cols=101  Identities=14%  Similarity=0.199  Sum_probs=72.1

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eeeecCCCCcchHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ++...++++++||-+|||. |..+..+++..|. .|++++.+++..+.+++.    |.. .+.....   ++..    + 
T Consensus        65 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~----~-  134 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ---GWEE----F-  134 (302)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC---CGGG----C-
T ss_pred             HHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC---CHHH----c-
Confidence            4567789999999999986 8899999998886 899999999887777653    433 1211111   2211    1 


Q ss_pred             HhhCCCCcEEEEcCCC---------------hHHHHHHHHhhcCCceEEEEccc
Q 017793          251 NAMGSGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                         .+.+|+|+....-               ...+..+.+.|+|+|+++.....
T Consensus       135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence               4679999874321               24677888999999999886543

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.08  E-value=0.0011  Score=56.48  Aligned_cols=102  Identities=19%  Similarity=0.220  Sum_probs=69.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCce-eeecCCCCcchHHHHHHHHHhhC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADE-TAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ..+++.+||.+|+| .|..++.+++..+...|++++.+++..+.+++.    |... +.....   +....+....  ..
T Consensus        51 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~--~~  124 (233)
T 2gpy_A           51 KMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG---DALQLGEKLE--LY  124 (233)
T ss_dssp             HHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CGGGSHHHHT--TS
T ss_pred             hccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHHHHHHhcc--cC
Confidence            34578899999988 588999999987434899999999988777653    5422 221112   2222222221  13


Q ss_pred             CCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..||+|+.....   ...+..+.+.|+++|.++...
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            579999876553   346778888999999988753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.07  E-value=0.0058  Score=47.31  Aligned_cols=77  Identities=14%  Similarity=0.231  Sum_probs=56.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      ..+++|.|+|.+|...++.+...|. .|++++.++++.+.+++.+...+. .+..  + ...+++.   .-.++|+++.+
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~~--~-~~~l~~~---~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADPT--D-ESFYRSL---DLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCTT--C-HHHHHHS---CCTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCCC--C-HHHHHhC---CcccCCEEEEe
Confidence            4679999999999999999999998 688999999999888887764332 1111  1 1222222   24579999999


Q ss_pred             CCChH
Q 017793          264 VGFDK  268 (366)
Q Consensus       264 ~g~~~  268 (366)
                      .+...
T Consensus        78 ~~~~~   82 (141)
T 3llv_A           78 GSDDE   82 (141)
T ss_dssp             CSCHH
T ss_pred             cCCHH
Confidence            99653

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.06  E-value=0.0017  Score=53.48  Aligned_cols=102  Identities=17%  Similarity=0.241  Sum_probs=69.5

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCC-ceeeecCCCCcchHHHHHHHHH
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGA-DETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ...++++++||-.|+|. |..++.+++..+ ...+++++.+++..+.+++    .+. +.+.....+..++..       
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------   88 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK-------   88 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG-------
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh-------
Confidence            34578899999999887 888889999864 3389999999988777755    343 222222222112211       


Q ss_pred             hhCCCCcEEEEcCCC---------------hHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .....+|+|+...+-               ...+..+.+.|+++|+++...
T Consensus        89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~  139 (197)
T 3eey_A           89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI  139 (197)
T ss_dssp             TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence            124679999876532               247888889999999998764

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.05  E-value=0.0015  Score=58.49  Aligned_cols=104  Identities=22%  Similarity=0.246  Sum_probs=71.1

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .++...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++.    |.+.+.....   +......  
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~---d~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG---DGYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC---Chhhccc--
Confidence            34567789999999999887 8888999987542 4699999999888777653    5433221112   2211110  


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                         ....+|+|+....-......+.+.|+++|+++..-
T Consensus       141 ---~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 ---EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             ---GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             ---cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence               13579999987654434467788999999988753

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.05  E-value=0.0014  Score=54.40  Aligned_cols=135  Identities=16%  Similarity=0.242  Sum_probs=78.7

Q ss_pred             cceEEEE-ecCCceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          139 SLAHKVV-HPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       139 ~~~e~~~-~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      .|.+|.. .+....+.+++.+++..+.. +........+.. .++++.+||-+|+|. |..+..+++ .+...+++++.+
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~l~~-~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD~s   92 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTTQLAMLGIER-AMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATDIS   92 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-HHHHHHHHHHHH-HCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEESC
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-ccHHHHHHHHHH-hccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEECC
Confidence            4455555 56667777887776655421 111111222222 257889999999887 778888776 466689999999


Q ss_pred             hhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          218 VQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       218 ~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ++..+.+++.    +...+.....   ++...       ....+|+|+......   ..+..+.+.|+++|+++...
T Consensus        93 ~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~-------~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           93 DESMTAAEENAALNGIYDIALQKT---SLLAD-------VDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             HHHHHHHHHHHHHTTCCCCEEEES---STTTT-------CCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCceEEEec---ccccc-------CCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            9887777653    4332111111   11111       146799999865532   12344556789999988754

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=97.03  E-value=0.0038  Score=53.85  Aligned_cols=125  Identities=18%  Similarity=0.299  Sum_probs=75.8

Q ss_pred             CceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH--
Q 017793          149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN--  226 (366)
Q Consensus       149 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~--  226 (366)
                      ...+.+++++.+...... ........+... ++++++||-+|+|. |..++.+++ .|. .+++++.++...+.+++  
T Consensus        88 ~~~~~l~p~~~fgtg~~~-tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~  162 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHHE-TTRLALKALARH-LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANA  162 (254)
T ss_dssp             SEEEECCCC-----CCSH-HHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHH
T ss_pred             ceEEEECCCccccCCCCH-HHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHH
Confidence            445666666554433211 111122334433 67899999999877 888888777 577 89999999988777765  


Q ss_pred             --cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEcc
Q 017793          227 --LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       227 --lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                        .+.+ + .+..  .++...   +   ....+|+|+.+...   ...+..+.+.|+++|+++..+.
T Consensus       163 ~~~~~~-v-~~~~--~d~~~~---~---~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          163 KRNGVR-P-RFLE--GSLEAA---L---PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HHTTCC-C-EEEE--SCHHHH---G---GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HHcCCc-E-EEEE--CChhhc---C---cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence              3433 1 1111  222221   1   13579999976532   2356677888999999988654

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.02  E-value=0.0054  Score=55.34  Aligned_cols=101  Identities=20%  Similarity=0.184  Sum_probs=66.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceee-----e----c--CCCCcchHHHHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-----K----V--STDIEDVDTDVGKIQ  250 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~-----~----~--~~~~~~~~~~~~~~~  250 (366)
                      -+|.+|.|.|.|.+|+.+++.++..|+ +|++.+.+.++.++++++++..+-     .    +  .....+.... ..+.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~-~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVITT-EVAR  250 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBCH-HHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhcCH-HHHh
Confidence            478999999999999999999999999 788888887776677777764320     0    0  0000100000 0011


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                         .-+.++|+++.+.+-....+.+.|..+|.++..+
T Consensus       251 ---~lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd  284 (355)
T 1c1d_A          251 ---TLDCSVVAGAANNVIADEAASDILHARGILYAPD  284 (355)
T ss_dssp             ---HCCCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred             ---hCCCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence               1247888888877643335678888888776544

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.98  E-value=0.0039  Score=53.13  Aligned_cols=104  Identities=19%  Similarity=0.270  Sum_probs=69.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHh--
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA--  252 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~--  252 (366)
                      +.+++.+||-+|+|. |..+..+++..+ ...+++++.+++..+.+++.    |.+..+.+..  .+....+..+...  
T Consensus        57 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~~~~~~~~~~  133 (239)
T 2hnk_A           57 KISGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL--GSALETLQVLIDSKS  133 (239)
T ss_dssp             HHHTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCSS
T ss_pred             HhhCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE--CCHHHHHHHHHhhcc
Confidence            345788999999884 889999999874 34899999999887777653    5432111111  2333333322210  


Q ss_pred             --------h-C-CCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEE
Q 017793          253 --------M-G-SGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 --------~-~-~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~  286 (366)
                              . + ..||+|+......   ..+..+.+.|+++|.++..
T Consensus       134 ~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          134 APSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             CCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence                    0 1 5799999876544   4567888999999999875

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.96  E-value=0.0019  Score=54.50  Aligned_cols=103  Identities=12%  Similarity=0.063  Sum_probs=69.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCC-----CCeEEEEcCChhHHHHHHHc----C-----CceeeecCCCCcchHHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFG-----APRIIITDVDVQRLSIARNL----G-----ADETAKVSTDIEDVDTD  245 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g-----~~~vv~v~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~~  245 (366)
                      .++++++||-+|+|. |..+..+++..+     ...|++++.+++..+.+++.    +     .+.+.....   +....
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~~  152 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK---NIYQV  152 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC---CGGGC
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC---ChHhc
Confidence            578999999999887 889999999876     23899999999887777653    3     222211111   11111


Q ss_pred             HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..... .....||+|+...........+.+.|+++|+++..-
T Consensus       153 ~~~~~-~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          153 NEEEK-KELGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             CHHHH-HHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             ccccC-ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            10000 013579999987766556788889999999988753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.95  E-value=0.011  Score=51.09  Aligned_cols=104  Identities=19%  Similarity=0.294  Sum_probs=63.2

Q ss_pred             CCCEEEEEC-CCH--HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCcee----eecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMG-SGP--IGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADET----AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G-~g~--vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~----~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+.++||.| +|.  +|.+.++.+...|+ .|+.++++++..+.+++    ++...+    .|. ++..++.+.++++.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDV-TNDAEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCC-SSSHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCC-CCHHHHHHHHHHHHH
Confidence            467899998 544  99988887777899 67777777654443333    333111    222 233344444444443


Q ss_pred             hhCCCCcEEEEcCCCh--------------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          252 AMGSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      . -+++|+++.+.|..              +               ..+.+...+.++|+++.++..
T Consensus        84 ~-~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  149 (266)
T 3oig_A           84 Q-VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL  149 (266)
T ss_dssp             H-HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             H-hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence            2 24799999998742              1               223344556678999988743

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.94  E-value=0.0084  Score=54.17  Aligned_cols=132  Identities=14%  Similarity=0.139  Sum_probs=81.5

Q ss_pred             CEEEEECCCHHHHHHHHHHH-H-CCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAAR-A-FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~-~-~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      -+|.|+|+|.+|...++.++ . .+++.+.+++.++++.+ +++++|.+....      ++    .++.+  ...+|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~----~~~l~--~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NY----KDMID--TENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CH----HHHHT--TSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CH----HHHhc--CCCCCEEE
Confidence            47899999999988777766 4 36644556788888765 456677654321      22    22321  34799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHh----hhc-CcEEEEeec--cCCChHHHHHHHHCCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA----AAR-EVDVIGIFR--YRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~----~~~-~~~~~~~~~--~~~~~~~~~~~l~~g~~  329 (366)
                      .|++...+...+..+|+.|- -+++..+..........+    -.. ++.+.-...  +...++.+.+++++|.+
T Consensus        77 i~tp~~~h~~~~~~al~~G~-~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAGL-NVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTTC-EEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTT
T ss_pred             EeCChHhHHHHHHHHHHCCC-EEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCC
Confidence            99998888888888888764 444432211111111111    123 444433222  24568889999999887

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.90  E-value=0.0021  Score=55.59  Aligned_cols=103  Identities=15%  Similarity=0.218  Sum_probs=71.5

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eeeecCCCCcchHHHHHHHHHhh
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ++...++++.+||-+||| .|..+..+++..+. .+++++.+++..+.+++....  .+.....+..+..        ..
T Consensus        48 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--------~~  117 (266)
T 3ujc_A           48 LSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE--------FP  117 (266)
T ss_dssp             TTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC--------CC
T ss_pred             HHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC--------CC
Confidence            355678899999999988 48899999997777 899999999999998876532  1111111111110        01


Q ss_pred             CCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEEcc
Q 017793          254 GSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      .+.+|+|+.+..-        ...+..+.+.|+|+|+++....
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            4579999875321        2356778889999999988753

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.87  E-value=0.0083  Score=52.52  Aligned_cols=98  Identities=13%  Similarity=0.193  Sum_probs=69.2

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +...++++.+||-+|||. |..+..+++..|. .|++++.+++..+.+++.    +.. .+.....   ++..    +  
T Consensus        58 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~----~--  126 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA---GWEQ----F--  126 (287)
T ss_dssp             TTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES---CGGG----C--
T ss_pred             HHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC---Chhh----C--
Confidence            456788999999999887 8888899977788 899999999988777653    322 1111111   2211    1  


Q ss_pred             hhCCCCcEEEEc-----CC---ChHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDC-----VG---FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~-----~g---~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ...+|+|+..     ++   -...+..+.+.|+|+|+++...
T Consensus       127 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          127 --DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             --CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             --CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence              2579999865     22   1346788889999999988754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.84  E-value=0.0018  Score=50.18  Aligned_cols=76  Identities=8%  Similarity=0.240  Sum_probs=52.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +.+|+|+|+|.+|...++.+...|. .|++++.++++.+.+++.+... +..+.  .+ .+.+.+.   ...++|+++.+
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~-~~~d~--~~-~~~l~~~---~~~~~d~vi~~   77 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHA-VIANA--TE-ENELLSL---GIRNFEYVIVA   77 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEE-EECCT--TC-HHHHHTT---TGGGCSEEEEC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEE-EEeCC--CC-HHHHHhc---CCCCCCEEEEC
Confidence            5679999999999999999999998 5778888888777665555432 22111  12 1222221   13479999999


Q ss_pred             CCCh
Q 017793          264 VGFD  267 (366)
Q Consensus       264 ~g~~  267 (366)
                      ++..
T Consensus        78 ~~~~   81 (144)
T 2hmt_A           78 IGAN   81 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9964

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.84  E-value=0.0035  Score=53.14  Aligned_cols=105  Identities=11%  Similarity=0.128  Sum_probs=70.3

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhh
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ++...++++++||-+|||. |..+..+++..|...|++++.+++..+.+++.-.  +.+.....+..+....   + . .
T Consensus        67 l~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~---~-~-~  140 (230)
T 1fbn_A           67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY---A-N-I  140 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG---T-T-T
T ss_pred             ccccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccc---c-c-c
Confidence            3445678899999999887 8899999998875589999999988877765321  1221111111111000   0 0 1


Q ss_pred             CCCCcEEEEcCCCh---H-HHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCVGFD---K-TMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~g~~---~-~~~~~~~~l~~~G~~v~~  286 (366)
                      ...+|+|+..+..+   . .+..+.+.|+++|+++..
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            25699999766544   2 477888899999999875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.83  E-value=0.017  Score=49.77  Aligned_cols=82  Identities=18%  Similarity=0.231  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecC---CCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS---TDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G~-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~---~~~~~~~~~~~~~~~~  252 (366)
                      .|.++||.|+ |  ++|.+..+.+...|+ +|+.++++++..+.+    ++++...+..+.   ++.++..+.+.+..+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4788999994 4  899998888888899 688888887655433    334433222221   2233444444444332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+.+|+++++.|.
T Consensus        84 -~G~iD~lvnnAg~   96 (256)
T 4fs3_A           84 -VGNIDGVYHSIAF   96 (256)
T ss_dssp             -HCCCSEEEECCCC
T ss_pred             -hCCCCEEEecccc
Confidence             3579999998873

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.78  E-value=0.0046  Score=51.54  Aligned_cols=99  Identities=19%  Similarity=0.195  Sum_probs=70.4

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ..++++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.+.+.+.....+..++         .....+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~---------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW---------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC---------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC---------CCCCcee
Confidence            4477889999999876 8888888887 76 899999999999998886643332222221111         1246799


Q ss_pred             EEEEcCCC--------hHHHHHHHHhhcCCceEEEEccc
Q 017793          259 VSFDCVGF--------DKTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       259 ~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +|+....-        ...+..+.+.|+++|.++.....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            99865421        34677888999999999887543

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.78  E-value=0.00048  Score=58.89  Aligned_cols=99  Identities=12%  Similarity=0.099  Sum_probs=65.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce---eeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE---TAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ..+|.+||-+|+|. |..+..+++..+. .+++++.+++-.+.+++.....   +..+.   .+......   ......|
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~---~~a~~~~~---~~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAP---TLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGG---GSCTTCE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe---ehHHhhcc---cccccCC
Confidence            46899999999885 8888888886665 7899999999888887754221   11111   12222111   1124568


Q ss_pred             cEE-EEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          258 DVS-FDCVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       258 d~v-ld~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      |.| +|++..          ...+..+.+.|+|||+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            888 455432          135567889999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.77  E-value=0.01  Score=51.12  Aligned_cols=105  Identities=15%  Similarity=0.258  Sum_probs=65.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee-eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+ ++++.... +..+ ++..+..+.+.++.+. -+++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT-LGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            478899998 68999998888888899 788888888776544 44443321 1111 2223333333333322 24799


Q ss_pred             EEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          259 VSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       259 ~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +++++.|..          +               ..+.+...++++|+++.++..
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  140 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV  140 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence            999998742          1               122334455668899988753

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.74  E-value=0.0015  Score=55.26  Aligned_cols=98  Identities=16%  Similarity=0.199  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC------CeEEEEcCChhHHHHHHHc----C-----CceeeecCCCCcchHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGA------PRIIITDVDVQRLSIARNL----G-----ADETAKVSTDIEDVDT  244 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~------~~vv~v~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~  244 (366)
                      .++++++||-+|+|. |..+..+++..+.      ..|++++.+++..+.+++.    +     .+.+.....   +...
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG---DGRK  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES---CGGG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC---Cccc
Confidence            578999999999887 8888889887663      3899999999887776542    1     111111111   1111


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .   +.  ....||+|+.+.........+.+.|+++|+++..
T Consensus       157 ~---~~--~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          157 G---YP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             C---CG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             C---CC--cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence            1   10  1257999998776655667888999999998864

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.74  E-value=0.0034  Score=53.97  Aligned_cols=102  Identities=17%  Similarity=0.233  Sum_probs=67.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ..++.+||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++.    |...-+.+..  .+..+.+..+.  ...
T Consensus        61 ~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~l~~~~--~~~  135 (248)
T 3tfw_A           61 LTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE--GPALQSLESLG--ECP  135 (248)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHTCC--SCC
T ss_pred             hcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHhcC--CCC
Confidence            45688999999886 888899999874 44899999999988777653    5432111111  23322222220  124


Q ss_pred             CCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793          256 GIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       256 ~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .||+|+-....   ...+..+.+.|++||.++.-.
T Consensus       136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            79999843332   246778889999999887653

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.70  E-value=0.0061  Score=54.25  Aligned_cols=92  Identities=21%  Similarity=0.229  Sum_probs=63.8

Q ss_pred             CEEEEECCCHHHHHHHHHHH--HCCCCeEEEEcCChhH--HHHHHHcCCceeeecCCCCcchHHHHHHHHH-hhCCCCcE
Q 017793          185 TNVMIMGSGPIGLVTLLAAR--AFGAPRIIITDVDVQR--LSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMGSGIDV  259 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~--~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~  259 (366)
                      -+|.|+|+|.+|...+..+.  .-+++.+.+++.++++  .++++++|.....      .+    +.++.+ +...++|+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~----~e~ll~~~~~~~iDv   74 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AG----VEGLIKLPEFADIDF   74 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SH----HHHHHHSGGGGGEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CC----HHHHHhccCCCCCcE
Confidence            57899999999988877774  3466556667777665  5677788864211      12    222322 11357999


Q ss_pred             EEEcCCChHHHHHHHHhhcC--CceEEEE
Q 017793          260 SFDCVGFDKTMSTALNATRP--GGKVCLI  286 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~--~G~~v~~  286 (366)
                      |++|++...+.+.+...+..  |.+++..
T Consensus        75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           75 VFDATSASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             EEECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence            99999988788888888887  8877763

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.70  E-value=0.0023  Score=53.94  Aligned_cols=99  Identities=19%  Similarity=0.192  Sum_probs=67.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc----C-----CceeeecCCCCcchHHHHHHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----G-----ADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .++++++||-+|+|. |..+..+++..|. ..|++++.+++..+.+++.    +     .+.+.....   +.....   
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~~~---  146 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---DGRMGY---  146 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---CGGGCC---
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC---CcccCc---
Confidence            478999999999886 8888899988763 2899999999888777542    2     122211111   111100   


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                        .....||+|+...........+.+.|+++|+++..-
T Consensus       147 --~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          147 --AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             --GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence              013569999887665556678889999999988753

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.69  E-value=0.0072  Score=50.93  Aligned_cols=105  Identities=19%  Similarity=0.256  Sum_probs=69.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhh-
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM-  253 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~-  253 (366)
                      +..++.+||-+|+| .|..++.+++..+ ..++++++.+++..+.+++.    |...-+.+..  .+..+.+..+.... 
T Consensus        66 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~~~~~~~~~~  142 (229)
T 2avd_A           66 RLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL--KPALETLDELLAAGE  142 (229)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHTTC
T ss_pred             HhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE--cCHHHHHHHHHhcCC
Confidence            34577899999988 5889999999764 34899999999888777653    4421111111  23333333332110 


Q ss_pred             CCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...+|+|+......   ..+..+.+.|+++|.++...
T Consensus       143 ~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          143 AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            15799998654432   46788889999999988754

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.68  E-value=0.012  Score=49.41  Aligned_cols=103  Identities=18%  Similarity=0.213  Sum_probs=68.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhhC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ..++.+||-+|+|. |..++.+++... ..++++++.+++..+.+++    .|... +....   .+..+.+..+.....
T Consensus        56 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~~  131 (223)
T 3duw_A           56 IQGARNILEIGTLG-GYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT---GLALDSLQQIENEKY  131 (223)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHTTC
T ss_pred             hhCCCEEEEecCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhcCC
Confidence            45678999999875 888889999873 2389999999988776654    35432 21111   233333433332222


Q ss_pred             CCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..||+|+-....   ...+..+.+.|++||.++.-.
T Consensus       132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          132 EPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            569999854432   245777889999999887643

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.65  E-value=0.029  Score=49.33  Aligned_cols=105  Identities=19%  Similarity=0.227  Sum_probs=64.4

Q ss_pred             CCCEEEEEC-CCH--HHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGP--IGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~--vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|.  +|.+.++.+...|+ .|+.++++++..+.++    +.+....+..+ ++..+..+.++++.+. -
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  107 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK-W  107 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-c
Confidence            578899998 555  99998888888899 6777777765433333    33422222211 2223344444444332 3


Q ss_pred             CCCcEEEEcCCChH-----------------------------HHHHHHHhhcCCceEEEEccc
Q 017793          255 SGIDVSFDCVGFDK-----------------------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       255 ~~~d~vld~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +++|+++++.|...                             ..+.++..+.++|+++.++..
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~  171 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY  171 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence            47999999988420                             233455566778999988643

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.65  E-value=0.011  Score=53.76  Aligned_cols=131  Identities=16%  Similarity=0.153  Sum_probs=82.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      -+|.|+|+|.+|...+..++.. +++.+.+++.++++.+.++++|+..   |    .++.+    +.+  ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~----ll~--~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---Y----ESYEA----VLA--DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---C----SCHHH----HHH--CTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---e----CCHHH----Hhc--CCCCCEEEEc
Confidence            4789999999998777777665 6644556688888888777777632   2    23333    322  3579999999


Q ss_pred             CCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEE-Ee-eccCCChHHHHHHHHCCCC
Q 017793          264 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVI-GI-FRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       264 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~g~~  329 (366)
                      +....+...+..+|..|-. +++.-+.........    ..-..++.+. +. ..+...++.+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~aGkh-Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           73 TPNDSHKELAISALEAGKH-VVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHCCCC-EEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCC
Confidence            9988888888888887654 445322111110111    1112233332 22 2336678889999999887

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.64  E-value=0.0078  Score=52.51  Aligned_cols=101  Identities=15%  Similarity=0.211  Sum_probs=69.6

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHc-----CCceeeecCCCCcchHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNL-----GADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ....++++++||-.|+|. |..++.+++.. ....+++++.+++..+.+++.     |.+.+.....   ++...   + 
T Consensus       104 ~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~---~-  175 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---DIADF---I-  175 (275)
T ss_dssp             --CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---CTTTC---C-
T ss_pred             HHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC---chhcc---C-
Confidence            556788999999999874 88888888874 233899999999988877653     5333222222   11111   1 


Q ss_pred             HhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ....+|+|+...... ..+..+.+.|+++|+++...
T Consensus       176 --~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          176 --SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             --CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             --cCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence              135699999866544 46788889999999988764

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.62  E-value=0.0041  Score=51.63  Aligned_cols=101  Identities=11%  Similarity=0.035  Sum_probs=64.0

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC---------------ceeeecCCCC
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GA---------------DETAKVSTDI  239 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~---------------~~~~~~~~~~  239 (366)
                      +....++++.+||..|||. |..+..+++. |. .|+++|.+++-.+.+++. +.               ..+.....+.
T Consensus        15 ~~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~   91 (203)
T 1pjz_A           15 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   91 (203)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence            3445577899999999886 7788888886 87 899999999988877653 21               1110011111


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCC----h----HHHHHHHHhhcCCceEEEE
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGF----D----KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~----~----~~~~~~~~~l~~~G~~v~~  286 (366)
                      .++...  .     .+.||+|++...-    .    ..+..+.+.|+|||+++++
T Consensus        92 ~~l~~~--~-----~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           92 FALTAR--D-----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             SSSTHH--H-----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             ccCCcc--c-----CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            121110  0     1369999973211    1    2456788899999994433

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=96.61  E-value=0.016  Score=51.68  Aligned_cols=101  Identities=23%  Similarity=0.269  Sum_probs=67.7

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ....++++++||=+|||+ |..++++++..+ ...|++++.++++.+.+++    +|...+.....+..++..       
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-------  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-------  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-------
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-------
Confidence            334678999999998776 777788888763 3489999999998877654    465433222232222211       


Q ss_pred             hhCCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ....||.|+-   |.|.                         ...+..+.+.|++||+++..
T Consensus       184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~s  245 (315)
T 1ixk_A          184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS  245 (315)
T ss_dssp             -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence             1457999975   3331                         24667788999999998864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.61  E-value=0.031  Score=48.52  Aligned_cols=104  Identities=19%  Similarity=0.317  Sum_probs=63.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHHH----HHHcCCcee-eecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSI----ARNLGADET-AKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+ .+++++.+.    +++.+.... +..+ ++.+++.+.+.++.+.. 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL-  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            478899998 68999998888888899 56655 444444332    233354321 1111 22333444444444322 


Q ss_pred             CCCcEEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEcc
Q 017793          255 SGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       255 ~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +++|+++++.|..          +               ..+.+...++++|+++.++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence            4799999998742          1               23345566778899998864

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.57  E-value=0.011  Score=50.87  Aligned_cols=93  Identities=15%  Similarity=0.270  Sum_probs=57.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-------------------hHHHHH----HHcCCc-eeeecCCCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-------------------QRLSIA----RNLGAD-ETAKVSTDI  239 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-------------------~~~~~~----~~lg~~-~~~~~~~~~  239 (366)
                      +.+|+|+|+|++|..+++.+...|+..+..++.+.                   .|.+.+    +++... .+..+...-
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            46899999999999999999889998899998876                   555443    233322 222222111


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCce
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK  282 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~  282 (366)
                      .  ...+.++.    .++|+|++|.+.......+.+.+...|.
T Consensus       111 ~--~~~~~~~~----~~~DvVi~~~d~~~~~~~l~~~~~~~~~  147 (249)
T 1jw9_B          111 D--DAELAALI----AEHDLVLDCTDNVAVRNQLNAGCFAAKV  147 (249)
T ss_dssp             C--HHHHHHHH----HTSSEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred             C--HhHHHHHH----hCCCEEEEeCCCHHHHHHHHHHHHHcCC
Confidence            1  11222222    3699999999887554444444443443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.55  E-value=0.031  Score=48.79  Aligned_cols=104  Identities=17%  Similarity=0.272  Sum_probs=62.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-HH----HHHHcCCcee---eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LS----IARNLGADET---AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++ .+    .+++.+....   .|. ++..++...+.++.+..
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANV-GVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            367899998 69999998888888899 67776666543 22    2334454321   122 22233333333333222


Q ss_pred             CCCCcEEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          254 GSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       254 ~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                       +++|+++++.|..          +               ..+.+...|+.+|+++.++..
T Consensus       106 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  165 (283)
T 1g0o_A          106 -GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  165 (283)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence             4799999998742          1               223455566677999988753

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.53  E-value=0.0084  Score=53.32  Aligned_cols=101  Identities=19%  Similarity=0.318  Sum_probs=69.3

Q ss_pred             HhCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHH
Q 017793          177 RRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       177 ~~~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +... ++++++||-+|||. |..+..+++..|. .|++++.+++..+.+++    .|.. .+.....+..++.     + 
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-  181 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-----F-  181 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----C-
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-----C-
Confidence            3344 78999999999876 8888889887777 79999999988777665    3432 1111111111110     0 


Q ss_pred             HhhCCCCcEEEEc-----CCChHHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDC-----VGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~-----~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ..+.||+|+..     ++-...+..+.+.|++||+++...
T Consensus       182 --~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~  221 (312)
T 3vc1_A          182 --DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT  221 (312)
T ss_dssp             --CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence              13579999763     233457888999999999998765

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.52  E-value=0.0058  Score=51.63  Aligned_cols=102  Identities=14%  Similarity=0.140  Sum_probs=69.5

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eeeecCCCCcchHHHHHHHHHh
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .++...++++++||-+|+|. |..+..+++.. . .+++++.+++..+.+++....  .+.....   +....+   .  
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~---d~~~~~---~--  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG---DGTLGY---E--  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES---CGGGCC---G--
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEEC---Cccccc---c--
Confidence            34556788999999999886 88888888874 4 899999999988888764221  1111111   111111   0  


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....+|+|+....-......+.+.|+++|+++..-
T Consensus       131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          131 EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence            13579999877654434567888999999988764

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.52  E-value=0.0084  Score=51.62  Aligned_cols=96  Identities=13%  Similarity=0.014  Sum_probs=62.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC--------------------ceeeecCCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGA--------------------DETAKVSTDI  239 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~--------------------~~~~~~~~~~  239 (366)
                      .+++.+||..|||. |..+..+++. |. .|++++.+++-.+.+++ .+.                    ..+-....+.
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~  142 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI  142 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence            46789999999886 7788888875 88 89999999998888754 321                    1111111111


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCC-----C---hHHHHHHHHhhcCCceEEEE
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .+       +.....+.||+|++...     .   ...+..+.+.|+|||+++++
T Consensus       143 ~~-------l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          143 FD-------LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TT-------GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cc-------CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            11       11111257999997432     1   13567788899999998654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.51  E-value=0.036  Score=48.34  Aligned_cols=81  Identities=20%  Similarity=0.311  Sum_probs=52.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCce-ee--ecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TA--KVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+. +++++... .+  |. ++..+..+.+.++.+.. +++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~-g~i  104 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDV-SDEQQIIAMVDACVAAF-GGV  104 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCT-TCHHHHHHHHHHHHHHH-SSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecC-CCHHHHHHHHHHHHHHc-CCC
Confidence            467899998 68999998888888899 78888888776554 44555332 11  22 22233334444443322 479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus       105 D~lvnnAg~  113 (277)
T 3gvc_A          105 DKLVANAGV  113 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.48  E-value=0.049  Score=46.82  Aligned_cols=104  Identities=23%  Similarity=0.362  Sum_probs=67.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADETAKVS---TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~  254 (366)
                      .|.++||.| ++++|.+..+.+...|+ +|+.+++++++.+.    +++.|.+.. .+.   ++..+..+.+.+..+ .-
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~-~~   84 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAH-GVAFDVTDELAIEAAFSKLDA-EG   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEE-ECCCCTTCHHHHHHHHHHHHH-TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHHHH-HC
Confidence            478889998 68999998888888999 78888888876543    233454322 121   223344444444443 24


Q ss_pred             CCCcEEEEcCCCh-------------------------HHHHHHHHhh---cCCceEEEEccc
Q 017793          255 SGIDVSFDCVGFD-------------------------KTMSTALNAT---RPGGKVCLIGLA  289 (366)
Q Consensus       255 ~~~d~vld~~g~~-------------------------~~~~~~~~~l---~~~G~~v~~g~~  289 (366)
                      +++|+++++.|..                         ...+..+..|   ..+|+++.++..
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~  147 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL  147 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence            5799999998753                         1233455555   356899988743

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.47  E-value=0.029  Score=49.39  Aligned_cols=82  Identities=21%  Similarity=0.245  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G~-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.|+ |  ++|.+.++.+...|+ +|+.++++++..+.+    ++.+....+..+ ++..+..+.+.++.+.. 
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW-  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4688999984 5  999988888888899 677787776544333    334433322221 22334444444443322 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.47  E-value=0.0092  Score=48.40  Aligned_cols=101  Identities=20%  Similarity=0.244  Sum_probs=68.6

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ceeeecCCCCcchHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGA-DETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +....++++.+||.+|+|. |..+..+++..  ..+++++.+++..+.+++    .+. +.+....   .++...   +.
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~---~~   96 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEA---LC   96 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHH---HT
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cCHHHh---cc
Confidence            3455688999999999887 88888888865  489999999988877765    343 2221111   232221   11


Q ss_pred             HhhCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ....+|+|+.....   ...+..+.+.|+++|.++...
T Consensus        97 --~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           97 --KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             --TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence              11479999976431   356777888999999988753

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.46  E-value=0.018  Score=49.34  Aligned_cols=101  Identities=22%  Similarity=0.234  Sum_probs=69.3

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +....++++.+||-+|||. |..+..+++..|. .+++++.+++..+.+++    .|.. .+.....+..++.       
T Consensus        29 ~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-------   99 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-------   99 (256)
T ss_dssp             HHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-------
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-------
Confidence            4556788999999999887 8889999998887 79999999987776654    3432 1111111111110       


Q ss_pred             HhhCCCCcEEEEcC------CChHHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ....||+|+..-      .....+..+.+.|+|||+++...
T Consensus       100 --~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          100 --ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             --CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             --cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence              135699998621      22356788888999999988754

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.46  E-value=0.029  Score=48.39  Aligned_cols=101  Identities=14%  Similarity=0.135  Sum_probs=66.4

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee--eecCCCCcchHHHHHHHHHh
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+....++++.+||=+|||. |..++.+++. |. .|++++.+++-.+.+++.-....  .+..........       .
T Consensus        37 il~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~-------~  106 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPK-------E  106 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCG-------G
T ss_pred             HHHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeeccccccc-------c
Confidence            34566788999999999886 8888888885 66 89999999999988876432211  111110000000       0


Q ss_pred             hCCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....||+|+.+..-        ...+....+.| |||+++..
T Consensus       107 ~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          107 LAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             GTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             cCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            14579999875321        12566677788 99998754

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=96.46  E-value=0.022  Score=52.96  Aligned_cols=107  Identities=15%  Similarity=0.153  Sum_probs=69.4

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-----------HHcC--CceeeecCCCCc
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-----------RNLG--ADETAKVSTDIE  240 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-----------~~lg--~~~~~~~~~~~~  240 (366)
                      ..++...++++++||=+|||. |..++.+|+..|...|++++.+++-.+.+           +.+|  ...+.....+  
T Consensus       233 ~ml~~l~l~~g~~VLDLGCGs-G~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD--  309 (433)
T 1u2z_A          233 DVYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK--  309 (433)
T ss_dssp             HHHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS--
T ss_pred             HHHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC--
Confidence            344667788999999999886 88999999988876899999999865544           3455  2332211111  


Q ss_pred             chHH--HHHHHHHhhCCCCcEEEEc--CCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          241 DVDT--DVGKIQNAMGSGIDVSFDC--VGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       241 ~~~~--~~~~~~~~~~~~~d~vld~--~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ++..  .+...    ...||+|+-+  ...+   ..+..+.+.|++||+++...
T Consensus       310 ~~~~~~~~~~~----~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d  359 (433)
T 1u2z_A          310 SFVDNNRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  359 (433)
T ss_dssp             CSTTCHHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccccc----cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence            1110  11111    2469999963  2222   23457778899999999874

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.44  E-value=0.043  Score=50.38  Aligned_cols=106  Identities=15%  Similarity=0.077  Sum_probs=68.8

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----------cCC--ceeeecCCCCcc
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----------LGA--DETAKVSTDIED  241 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----------lg~--~~~~~~~~~~~~  241 (366)
                      .+...+++++++||=+|||. |..++++|+..|+.++++++.+++-.+++++           +|.  +.+-....+..+
T Consensus       165 il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~  243 (438)
T 3uwp_A          165 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  243 (438)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence            34667899999999999886 8889999998898779999999865554432           343  333222222222


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCC--Ch---HHHHHHHHhhcCCceEEEEc
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVG--FD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g--~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...  ...    -..+|+|+-..-  .+   ..+...++.|++||+++...
T Consensus       244 lp~--~d~----~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE  288 (438)
T 3uwp_A          244 EEW--RER----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  288 (438)
T ss_dssp             HHH--HHH----HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred             Ccc--ccc----cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence            211  110    125899985321  12   24556778899999999875

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=96.44  E-value=0.01  Score=55.68  Aligned_cols=100  Identities=16%  Similarity=0.206  Sum_probs=65.8

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ...++|++||=+|||+ |..++++|..++ ...|++++.++++.+.+++    +|...+.....   +.......    .
T Consensus       101 L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~---Da~~l~~~----~  172 (456)
T 3m4x_A          101 AAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH---APAELVPH----F  172 (456)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC---CHHHHHHH----H
T ss_pred             cCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC---CHHHhhhh----c
Confidence            4578999998888665 556667777643 3489999999998877654    67654433222   22221111    1


Q ss_pred             CCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...||.|+-   |+|..                         ..+..+++.|++||+++..
T Consensus       173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs  233 (456)
T 3m4x_A          173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS  233 (456)
T ss_dssp             TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            467999975   44432                         3567788899999998863

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.44  E-value=0.037  Score=49.98  Aligned_cols=132  Identities=14%  Similarity=0.190  Sum_probs=82.8

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          185 TNVMIMGSGPIGLV-TLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       185 ~~vlI~G~g~vG~~-ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      =++.|+|+|.+|.. .+...+.. +++.+.++++++++.+ +++++|...+..      ++.+    +.+  ...+|+|+
T Consensus        24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~------d~~e----ll~--~~~iDaV~   91 (350)
T 4had_A           24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG------SYEE----MLA--SDVIDAVY   91 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES------SHHH----HHH--CSSCSEEE
T ss_pred             cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC------CHHH----Hhc--CCCCCEEE
Confidence            47999999999964 45555544 6754556677777654 667888765432      3333    332  46799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechH----hhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      -|+....+.+.+..+|..| +=+++.-+.....-....    .-..++.+.-.+  .+...++.+-+++++|.+
T Consensus        92 I~tP~~~H~~~~~~al~aG-khVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           92 IPLPTSQHIEWSIKAADAG-KHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             EeCCCchhHHHHHHHHhcC-CEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCC
Confidence            9999888888898888765 445665332211111111    122333333222  236678889999999887

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.43  E-value=0.03  Score=48.78  Aligned_cols=80  Identities=13%  Similarity=0.157  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+    ++.+... .  .|. ++..+....+.++.+.  
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~--  107 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDL-SEAGAGTDLIERAEAI--  107 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCT-TSTTHHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecC-CCHHHHHHHHHHHHHh--
Confidence            468899998 68999998888888899 677777776554322    2234332 1  122 2333444444444442  


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       108 g~iD~lvnnAg~  119 (275)
T 4imr_A          108 APVDILVINASA  119 (275)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=96.43  E-value=0.0056  Score=53.49  Aligned_cols=98  Identities=13%  Similarity=0.097  Sum_probs=66.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC------C--ceeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------A--DETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~--~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .  +.+....   .|..+.+..    .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~---~D~~~~l~~----~  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDGFMHIAK----S  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCSHHHHHT----C
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHhh----C
Confidence            3568999999775 777788888767679999999999888887631      1  1221111   222222221    2


Q ss_pred             CCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...+|+|+-....          .+.+..+.+.|+++|.++...
T Consensus       146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4679999864432          357889999999999998763

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.43  E-value=0.038  Score=48.52  Aligned_cols=103  Identities=18%  Similarity=0.228  Sum_probs=62.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-HHH----HHHcCCcee-e--ecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSI----ARNLGADET-A--KVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~----~~~lg~~~~-~--~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++ .+.    +++.+.... +  |. ++..+..+.+.++.+..
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDL-SDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHHHc
Confidence            478899998 69999998888888899 67776666542 222    233443321 1  22 22233334444443322


Q ss_pred             CCCCcEEEEcCCCh-----------H---------------HHHHHHHhhcCCceEEEEcc
Q 017793          254 GSGIDVSFDCVGFD-----------K---------------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  288 (366)
                       +++|+++++.|..           +               ..+.++..++++|+++.++.
T Consensus       124 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS  183 (291)
T 3ijr_A          124 -GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS  183 (291)
T ss_dssp             -SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred             -CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence             4799999987631           1               22334455667899988864

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.42  E-value=0.05  Score=45.17  Aligned_cols=91  Identities=13%  Similarity=0.198  Sum_probs=58.8

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|||.| +|.+|...++.+...|. .|+++++++++.+.+. .+... +..+-.+.+.    +.+     .++|+||.+.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~-~~~D~~d~~~----~~~-----~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINI-LQKDIFDLTL----SDL-----SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEE-EECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeE-EeccccChhh----hhh-----cCCCEEEECC
Confidence            689999 69999999999888898 7888888887765543 23322 2111111111    112     4699999999


Q ss_pred             CCh--------HHHHHHHHhhcCC--ceEEEEcc
Q 017793          265 GFD--------KTMSTALNATRPG--GKVCLIGL  288 (366)
Q Consensus       265 g~~--------~~~~~~~~~l~~~--G~~v~~g~  288 (366)
                      |..        .....+++.++..  ++++.++.
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            863        2334555666544  68887764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.41  E-value=0.072  Score=45.96  Aligned_cols=81  Identities=20%  Similarity=0.237  Sum_probs=51.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .  .|. ++.++..+.+.+..+. -+.+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~-~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADV-SDPKAVEAVFAEALEE-FGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCT-TSHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCC-CCHHHHHHHHHHHHHH-cCCC
Confidence            367899998 68999998888888899 688888888766544 4444221 1  122 2223333334433322 2479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        82 D~lvnnAg~   90 (263)
T 2a4k_A           82 HGVAHFAGV   90 (263)
T ss_dssp             CEEEEGGGG
T ss_pred             cEEEECCCC
Confidence            999999874

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.40  E-value=0.041  Score=47.08  Aligned_cols=103  Identities=15%  Similarity=0.139  Sum_probs=67.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh--
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM--  253 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~--  253 (366)
                      ..++.+||-+|+|. |..++.+++.+. -.++++++.+++..+.+++    .|.+.-+.+..  .+..+.+..+...+  
T Consensus        77 ~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~~  153 (247)
T 1sui_A           77 LINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDEKN  153 (247)
T ss_dssp             HTTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSGGG
T ss_pred             hhCcCEEEEeCCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE--CCHHHHHHHHHhccCC
Confidence            34678999999876 888889999863 2389999999988777764    35422111111  23333333332111  


Q ss_pred             CCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...||+||-....   ...+..+.+.|++||.++.-
T Consensus       154 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          154 HGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             TTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence            3579999854332   34677888999999998864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.39  E-value=0.022  Score=48.22  Aligned_cols=98  Identities=13%  Similarity=0.153  Sum_probs=62.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+.+|||.| +|.+|...++.+...|. .|+++++++++.+.+.+.+....+..+-. +.+.+    .    -.++|+||
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~----~----~~~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-EDFSH----A----FASIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGG----G----GTTCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-HHHHH----H----HcCCCEEE
Confidence            467999999 59999999888888898 78888888888877776666222221111 22221    1    24799999


Q ss_pred             EcCCChH-------------HHHHHHHhhc--CCceEEEEcccC
Q 017793          262 DCVGFDK-------------TMSTALNATR--PGGKVCLIGLAK  290 (366)
Q Consensus       262 d~~g~~~-------------~~~~~~~~l~--~~G~~v~~g~~~  290 (366)
                      .+.|...             ....+++.+.  ..++++.++...
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            9998531             1122233332  347888887543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.37  E-value=0.072  Score=45.82  Aligned_cols=82  Identities=20%  Similarity=0.306  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+.    +.+... .+..+ ++..++.+.+.++.+.. +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g  105 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-G  105 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc-C
Confidence            467899998 69999998888888899 6888888887654332    234322 11111 22233334444443322 4


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|+++.+.|.
T Consensus       106 ~id~lv~~Ag~  116 (262)
T 3rkr_A          106 RCDVLVNNAGV  116 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999885

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.37  E-value=0.024  Score=47.61  Aligned_cols=102  Identities=16%  Similarity=0.186  Sum_probs=67.5

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCc--eeeecCCCCcchHHHHHHHH
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGAD--ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ..+.+++.+||-+|+|. |..++.+++.++ ..++++++.+++..+.+++    .|..  .+-...   .+..+.+..+ 
T Consensus        51 ~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~---gda~~~l~~~-  125 (221)
T 3dr5_A           51 TTNGNGSTGAIAITPAA-GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL---SRPLDVMSRL-  125 (221)
T ss_dssp             HSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC---SCHHHHGGGS-
T ss_pred             hhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE---cCHHHHHHHh-
Confidence            34455667999999887 889999999863 2389999999998777654    4543  222211   2222222111 


Q ss_pred             HhhCCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEE
Q 017793          251 NAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~  286 (366)
                        ....||+||-.....   ..+..+.+.|++||.++.-
T Consensus       126 --~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          126 --ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             --CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             --cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence              146799998654322   3577888999999998863

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.36  E-value=0.0099  Score=51.18  Aligned_cols=100  Identities=19%  Similarity=0.272  Sum_probs=67.2

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .....+++.+||-+|||. |..+..+++.. . .+++++.+++..+.+++.    +...+.....+..++.     +   
T Consensus        31 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-----~---   99 (260)
T 1vl5_A           31 QIAALKGNEEVLDVATGG-GHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F---   99 (260)
T ss_dssp             HHHTCCSCCEEEEETCTT-CHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S---
T ss_pred             HHhCCCCCCEEEEEeCCC-CHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-----C---
Confidence            445577899999999884 88888888764 4 899999999887776653    3322211111111111     0   


Q ss_pred             hCCCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....||+|+.+..-      ...+..+.+.|+|+|+++...
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            13579999876432      356788899999999998764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.35  E-value=0.074  Score=46.26  Aligned_cols=81  Identities=22%  Similarity=0.322  Sum_probs=53.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+. .++++....   .|. ++..+..+.+.++.+. -+++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g~i  102 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDV-SSAKDAESMVEKTTAK-WGRV  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCT-TCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecC-CCHHHHHHHHHHHHHH-cCCC
Confidence            467899998 68999998888888899 78888888776554 344554321   122 2223333344444332 2479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++.+.|.
T Consensus       103 D~lv~nAg~  111 (277)
T 4dqx_A          103 DVLVNNAGF  111 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999884

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.34  E-value=0.019  Score=48.79  Aligned_cols=80  Identities=20%  Similarity=0.296  Sum_probs=51.6

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce-e--eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      +.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+. +++... .  .|. ++..+..+.+.++.+. .+++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~-~g~id   79 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADL-AHHEDVDVAFAAAVEW-GGLPE   79 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCT-TSHHHHHHHHHHHHHH-HCSCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCC-CCHHHHHHHHHHHHHh-cCCCc
Confidence            46899998 68999998888888899 6888888887765443 343221 1  122 2223344444444332 24799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++++.|.
T Consensus        80 ~lvnnAg~   87 (235)
T 3l6e_A           80 LVLHCAGT   87 (235)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCCC
Confidence            99999885

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.33  E-value=0.0045  Score=52.28  Aligned_cols=93  Identities=17%  Similarity=0.188  Sum_probs=67.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCC-cchHHHHHHHHHhh-CCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDI-EDVDTDVGKIQNAM-GSGI  257 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~-~~~~~~~~~~~~~~-~~~~  257 (366)
                      ++++.+||-+|||. |..+..+++. |. .|++++.+++..+.+++.... ..+.  .+. ..+.        .. ...|
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~--~d~~~~~~--------~~~~~~f  112 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYE--WNGKGELP--------AGLGAPF  112 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEE--CCSCSSCC--------TTCCCCE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEE--cchhhccC--------CcCCCCE
Confidence            46889999999876 7788888887 76 899999999998888776322 1111  111 1110        01 3579


Q ss_pred             cEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          258 DVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+|+....-...+..+.+.|+|+|+++..
T Consensus       113 D~v~~~~~~~~~l~~~~~~LkpgG~l~~~  141 (226)
T 3m33_A          113 GLIVSRRGPTSVILRLPELAAPDAHFLYV  141 (226)
T ss_dssp             EEEEEESCCSGGGGGHHHHEEEEEEEEEE
T ss_pred             EEEEeCCCHHHHHHHHHHHcCCCcEEEEe
Confidence            99998866667788899999999999844

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.33  E-value=0.031  Score=47.69  Aligned_cols=81  Identities=25%  Similarity=0.314  Sum_probs=52.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++++...+ .|. ++.+++.+.+.++.+. -+++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDV-ADPASVERGFAEALAH-LGRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCT-TCHHHHHHHHHHHHHH-HSSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence            367899998 69999998888888899 688888887766544 34453221 222 2223333444443332 247999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++++.|.
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.32  E-value=0.047  Score=47.31  Aligned_cols=106  Identities=14%  Similarity=0.278  Sum_probs=64.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHHH----HHHcCCcee-eecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSI----ARNLGADET-AKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| ++++|.+.++.+...|+ .|+.+ .+++++.+.    +++.+.... +..+ ++..+..+.++++.+.. 
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF-   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            467899998 68999998888888899 55554 444444332    233454322 1111 22233444444443322 


Q ss_pred             CCCcEEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEcccC
Q 017793          255 SGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       255 ~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +++|+++++.|..          +               ..+.++..+.++|+++.++...
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            4799999998742          1               2344566777899999887543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.30  E-value=0.057  Score=49.98  Aligned_cols=95  Identities=16%  Similarity=0.182  Sum_probs=67.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.+|+|+|.|.+|+..++.++..|. .|++++.++++.+.+++.|...+.- +..  + ...+   ...+-..+|+++-
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Dat--~-~~~L---~~agi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DAT--R-MDLL---ESAGAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CTT--C-HHHH---HHTTTTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CCC--C-HHHH---HhcCCCccCEEEE
Confidence            34679999999999999999999998 7999999999999999988754321 221  1 1222   2234567999999


Q ss_pred             cCCChHHHH---HHHHhhcCCceEEE
Q 017793          263 CVGFDKTMS---TALNATRPGGKVCL  285 (366)
Q Consensus       263 ~~g~~~~~~---~~~~~l~~~G~~v~  285 (366)
                      +++....-.   ...+.+.+.-+++.
T Consensus        75 ~~~~~~~n~~i~~~ar~~~p~~~Iia  100 (413)
T 3l9w_A           75 AIDDPQTNLQLTEMVKEHFPHLQIIA  100 (413)
T ss_dssp             CCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCChHHHHHHHHHHHHhCCCCeEEE
Confidence            999764322   23344556666655

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=96.30  E-value=0.027  Score=49.57  Aligned_cols=109  Identities=18%  Similarity=0.205  Sum_probs=69.1

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHc-----C-CceeeecCCCCcchHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNL-----G-ADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l-----g-~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +.....+++.+||-+|||. |..+..+++.. ....|++++.+++..+.+++.     + ...+.....+..++...  .
T Consensus        29 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~--~  105 (299)
T 3g5t_A           29 IDEYHDGERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL--G  105 (299)
T ss_dssp             HHHHCCSCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG--C
T ss_pred             HHHHhcCCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc--c
Confidence            3333346889999999986 89999999875 455899999999888877663     1 22221111221221100  0


Q ss_pred             HHHhhCCCCcEEEEcCCC-----hHHHHHHHHhhcCCceEEEEc
Q 017793          249 IQNAMGSGIDVSFDCVGF-----DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~-----~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      -.....+.+|+|+....-     ...+..+.+.|++||.++...
T Consensus       106 ~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (299)
T 3g5t_A          106 ADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG  149 (299)
T ss_dssp             TTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence            000002579999875431     457888899999999998744

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.30  E-value=0.011  Score=49.77  Aligned_cols=99  Identities=22%  Similarity=0.393  Sum_probs=66.2

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHHh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ...++++++||=+|||..|..++.+++..+. .|++++.+++..+.+++    .+.. .++.  .+...+..    +   
T Consensus        50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~--~d~~~~~~----~---  119 (230)
T 3evz_A           50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVK--SNGGIIKG----V---  119 (230)
T ss_dssp             HTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEE--CSSCSSTT----T---
T ss_pred             HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEe--CCchhhhh----c---
Confidence            3447889999999998558888888887655 89999999988777654    3431 1111  11111110    1   


Q ss_pred             hCCCCcEEEEcCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCVGF-------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....||+|+....-                         ...+..+.+.|+++|+++.+
T Consensus       120 ~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          120 VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            13579999864220                         34677788889999998875

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.30  E-value=0.011  Score=51.88  Aligned_cols=95  Identities=15%  Similarity=0.177  Sum_probs=65.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-----C---------ceeeecCCCCcchHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-----A---------DETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----~---------~~~~~~~~~~~~~~~~~~  247 (366)
                      .++.+||++|+|. |..+..+++. +..++++++.+++..+.+++.-     .         +.+....   .+..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~---~D~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---GDGFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---SCHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE---CchHHHhc
Confidence            4568999999776 7778888887 7778999999999888887642     1         1111111   23222222


Q ss_pred             HHHHhhCCCCcEEEEcCC----------ChHHHHHHHHhhcCCceEEEE
Q 017793          248 KIQNAMGSGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~  286 (366)
                         .  ...+|+|+-...          ..+.+..+.+.|+++|.++..
T Consensus       149 ---~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          149 ---N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             ---H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence               1  467999975443          245678888999999998875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.28  E-value=0.04  Score=47.42  Aligned_cols=81  Identities=15%  Similarity=0.205  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHHHH-H---HcCCcee-e--ecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIA-R---NLGADET-A--KVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~-~---~lg~~~~-~--~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+ .+++++.+.+ +   +.+.... +  |. ++..+..+.+.++.+..
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANV-GQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            467899998 69999998888888899 55554 7777655433 2   2343321 1  22 22233344444443322


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +++|+++++.|.
T Consensus        81 -g~id~lv~nAg~   92 (258)
T 3oid_A           81 -GRLDVFVNNAAS   92 (258)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999873

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.28  E-value=0.038  Score=46.85  Aligned_cols=77  Identities=25%  Similarity=0.320  Sum_probs=51.3

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      +.++||.| +|++|.+.++.+...|+ .|+.+++++++  ..++++...+ .|. ++ .+..+.+.++.+.. +++|+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~-~~-~~~~~~~~~~~~~~-g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDL-EK-DDPKGLVKRALEAL-GGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCT-TT-SCHHHHHHHHHHHH-TSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCC-ch-HHHHHHHHHHHHHc-CCCCEEE
Confidence            46899998 69999998888888898 67777777765  3444553221 222 22 45555555444322 4799999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      ++.|.
T Consensus        76 ~~Ag~   80 (239)
T 2ekp_A           76 HAAAV   80 (239)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.27  E-value=0.042  Score=49.70  Aligned_cols=131  Identities=17%  Similarity=0.115  Sum_probs=80.9

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          185 TNVMIMGSGPIGL-VTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       185 ~~vlI~G~g~vG~-~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      -+|.|+|+|.+|. ..+..++.. +++.+.++++++++.+ +++++|+...       .++    .++.+  ...+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-------~~~----~~ll~--~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-------EGY----PALLE--RDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-------ESH----HHHHT--CTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-------CCH----HHHhc--CCCCCEEE
Confidence            4789999999997 455555555 6744556677777655 5566787543       122    22322  35799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      .|+....+...+..+|..|-. +++.-+.........    ..-..++.+.-.+  .+...++.+.+++++|.+
T Consensus        95 i~tp~~~h~~~~~~al~aGk~-Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAGKH-VLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCCCc-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCC
Confidence            999988888888888877655 445432211111111    1222333333222  336778899999999887

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.27  E-value=0.03  Score=48.09  Aligned_cols=81  Identities=20%  Similarity=0.209  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC-CCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+..++++. ..+..+ ++..++.+.+.+..+. -+++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~-~g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYA-LGRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            367899998 69999998888888898 67777777766445555542 322211 2223334444443332 2479999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +++.|.
T Consensus        82 v~~Ag~   87 (256)
T 2d1y_A           82 VNNAAI   87 (256)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.26  E-value=0.062  Score=40.97  Aligned_cols=77  Identities=17%  Similarity=0.218  Sum_probs=51.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +.+|+|+|+|.+|...++.+...|. .|+++++++++.+.+.+ ++...+ ..+.  .+. ..+.   ...-.++|+|+.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-~~d~--~~~-~~l~---~~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVI-NGDC--TKI-KTLE---DAGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEE-ESCT--TSH-HHHH---HTTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEE-EcCC--CCH-HHHH---HcCcccCCEEEE
Confidence            3579999999999999888888897 78888888888776654 465322 1111  111 1221   112357999999


Q ss_pred             cCCChH
Q 017793          263 CVGFDK  268 (366)
Q Consensus       263 ~~g~~~  268 (366)
                      +++...
T Consensus        76 ~~~~~~   81 (140)
T 1lss_A           76 VTGKEE   81 (140)
T ss_dssp             CCSCHH
T ss_pred             eeCCch
Confidence            998763

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.26  E-value=0.022  Score=48.46  Aligned_cols=103  Identities=17%  Similarity=0.164  Sum_probs=67.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh--
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM--  253 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~--  253 (366)
                      ..++.+||-+|+|. |..++.+++.+. ..++++++.+++..+.+++    .|...-+.+..  .+..+.+..+...+  
T Consensus        68 ~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~~  144 (237)
T 3c3y_A           68 LVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE--SDAMLALDNLLQGQES  144 (237)
T ss_dssp             HTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSTTC
T ss_pred             hhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhccCC
Confidence            35678999999875 788888999864 3489999999998777754    35432111111  23333333332211  


Q ss_pred             CCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...||+||-....   ...+..+.+.|++||.++.-
T Consensus       145 ~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          145 EGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence            3579999865432   24567788999999998764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.25  E-value=0.034  Score=48.17  Aligned_cols=103  Identities=20%  Similarity=0.252  Sum_probs=61.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|++ |+.+ .+++++.+.+    ++.+....   .|. ++..+..+.+.++.+. 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~-  102 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAAGGKALTAQADV-SDPAAVRRLFATAEEA-  102 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHHHHHHHHHHHHH-
Confidence            478899998 689999888777778994 5544 5555544332    33343321   122 2223344444444332 


Q ss_pred             CCCCcEEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEcc
Q 017793          254 GSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  288 (366)
                      -+++|+++++.|..          +               ..+.++..++++|+++.++.
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence            24799999998742          1               23345556667899998864

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.25  E-value=0.035  Score=47.88  Aligned_cols=81  Identities=26%  Similarity=0.325  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-ee--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGAD-ET--AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+. ++... ..  .|. ++..++.+.+.++.+.. +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~d~~~v~~~~~~~~~~~-g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDV-TKRASVDAAMQKAIDAL-GGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCT-TCHHHHHHHHHHHHHHH-TCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeC-CCHHHHHHHHHHHHHHc-CCC
Confidence            467899998 69999998888888899 7888888877665443 34321 11  122 22233334444433322 479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        88 D~lv~~Ag~   96 (263)
T 3ak4_A           88 DLLCANAGV   96 (263)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999873

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=96.25  E-value=0.031  Score=46.52  Aligned_cols=100  Identities=11%  Similarity=0.152  Sum_probs=63.8

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ..+++|++||=+|||. |..+..+++..+...|++++.+++..+    .+++..  .+.....+..+...    .. ...
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~--~v~~~~~d~~~~~~----~~-~~~  124 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN--NIIPLLFDASKPWK----YS-GIV  124 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS--SEEEECSCTTCGGG----TT-TTC
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC--CeEEEEcCCCCchh----hc-ccc
Confidence            4578999999999886 778888898876448999999987433    333332  11111111111100    00 013


Q ss_pred             CCCcEEEEcCCChH----HHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~  286 (366)
                      ..||+|+..+..+.    .+..+.+.|++||+++..
T Consensus       125 ~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          125 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            56999988765432    256778899999999876

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=96.24  E-value=0.048  Score=45.31  Aligned_cols=98  Identities=17%  Similarity=0.110  Sum_probs=65.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .++.+||-+|+|. |..++.+++......+++++.+++..+.+++    .+.+.+..+..+..++...   +   ....+
T Consensus        40 ~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~---~~~~~  112 (214)
T 1yzh_A           40 NDNPIHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY---F---EDGEI  112 (214)
T ss_dssp             SCCCEEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT---S---CTTCC
T ss_pred             CCCCeEEEEccCc-CHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh---c---CCCCC
Confidence            4578888899875 8888889988743489999999988776654    3443322222222222111   1   13469


Q ss_pred             cEEEEcCCC--------------hHHHHHHHHhhcCCceEEEE
Q 017793          258 DVSFDCVGF--------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~vld~~g~--------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |.|+-....              ...+..+.+.|+++|.++..
T Consensus       113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  155 (214)
T 1yzh_A          113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  155 (214)
T ss_dssp             SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence            999876554              25788888999999998764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.24  E-value=0.026  Score=49.14  Aligned_cols=81  Identities=22%  Similarity=0.364  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TA--KVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+    ++.+... .+  |. ++..++.+.+.++.+.. 
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~v~~~~~~~~~~~-  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDV-TQPDQVRGMLDQMTGEL-  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT-TCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHHHHHHHHHHHHHc-
Confidence            467899998 68999998888888899 677777777654432    2233221 11  22 22334444444443322 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       108 g~iD~lvnnAg~  119 (276)
T 3r1i_A          108 GGIDIAVCNAGI  119 (276)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.24  E-value=0.029  Score=50.85  Aligned_cols=94  Identities=16%  Similarity=0.155  Sum_probs=64.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC----hhH---------HHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD----VQR---------LSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~----~~~---------~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ++.+|+|.|+|..|..+++++...|+++|+.++++    .+|         .+++++...     . ....++.+.+   
T Consensus       191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~-----~-~~~~~L~eav---  261 (388)
T 1vl6_A          191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP-----E-RLSGDLETAL---  261 (388)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT-----T-CCCSCHHHHH---
T ss_pred             CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc-----c-CchhhHHHHH---
Confidence            57899999999999999999999999889999887    544         344444321     0 1122333332   


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                           .++|++|-+++..-.-...++.|+++-.++.+..+.
T Consensus       262 -----~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt  297 (388)
T 1vl6_A          262 -----EGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  297 (388)
T ss_dssp             -----TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             -----ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence                 358999999884434456677788777555554433

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.24  E-value=0.061  Score=46.89  Aligned_cols=103  Identities=20%  Similarity=0.274  Sum_probs=62.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC------------hhHHHH----HHHcCCcee---eecCCCCcch
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRLSI----ARNLGADET---AKVSTDIEDV  242 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~~----~~~lg~~~~---~~~~~~~~~~  242 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++            .++.+.    +++.+....   .|+ ++..+.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v   86 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV-RDRAAV   86 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT-TCHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC-CCHHHH
Confidence            467899998 68999998888888899 67777665            333322    233343221   122 222333


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCCh--------H---------------HHHHHHHhhcCCceEEEEcc
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGFD--------K---------------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~~--------~---------------~~~~~~~~l~~~G~~v~~g~  288 (366)
                      .+.+.++.+.. +++|+++++.|..        +               ..+.++..+..+|+++.++.
T Consensus        87 ~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  154 (287)
T 3pxx_A           87 SRELANAVAEF-GKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence            34444443322 4799999998742        1               22334445567899988864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.23  E-value=0.021  Score=49.25  Aligned_cols=81  Identities=17%  Similarity=0.203  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++ .+.+++.+...+ .|. ++..+..+.+.++.+. -+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDF-SCETGIMAFIDLLKTQ-TSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCT-TSHHHHHHHHHHHHHH-CSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCC-CCHHHHHHHHHHHHHh-cCCCCE
Confidence            357899998 69999998888888899 56666666554 445555664322 122 2223344444444332 357999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++++.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999884

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=96.22  E-value=0.014  Score=54.80  Aligned_cols=103  Identities=19%  Similarity=0.252  Sum_probs=68.0

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      .....+++++||-.|||+ |..+.++++.++- ..+++++.++++.+.+++    +|.+.+.....+..++...   +  
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~---~--  326 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI---I--  326 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS---S--
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh---h--
Confidence            334678999999998877 7778888887643 489999999998877654    4664332222222221110   0  


Q ss_pred             hhCCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                       .+..||.|+-   |.|.                         ...+..+.+.|++||+++..
T Consensus       327 -~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~  388 (450)
T 2yxl_A          327 -GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYT  388 (450)
T ss_dssp             -CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             -ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             1256999985   4433                         23567788889999998864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.22  E-value=0.025  Score=48.66  Aligned_cols=82  Identities=12%  Similarity=0.221  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .  .|. ++..+..+.+.++.+..+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-SSRSERQELMNTVANHFH   85 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHHcC
Confidence            467899998 68999998888888899 688888887765432 22   24321 1  122 222333344444433222


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        86 g~id~lv~~Ag~   97 (260)
T 2ae2_A           86 GKLNILVNNAGI   97 (260)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.21  E-value=0.017  Score=49.64  Aligned_cols=80  Identities=15%  Similarity=0.173  Sum_probs=52.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+    ++.+... .  .|. ++..+..+.+.++.+.  
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~--   81 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDA-RNEDEVTAFLNAADAH--   81 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcC-CCHHHHHHHHHHHHhh--
Confidence            467899998 68999998888888899 688888887765433    2234322 1  122 2233444444444443  


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus        82 g~id~lv~nAg~   93 (252)
T 3h7a_A           82 APLEVTIFNVGA   93 (252)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCceEEEECCCc
Confidence            679999999984

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.20  E-value=0.073  Score=44.61  Aligned_cols=116  Identities=9%  Similarity=0.084  Sum_probs=64.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+.+|||.|+|.+|...++.+...|+ .|.+++... +..+.+.+.+.-..+.     ..+...       .-.++|+||
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~-----~~~~~~-------dL~~adLVI   96 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKR-----KKVGEE-------DLLNVFFIV   96 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEEC-----SCCCGG-------GSSSCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEE-----CCCCHh-------HhCCCCEEE
Confidence            47899999999999999999999999 566665433 2233222223212221     111111       125799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhc-CcEEEEeec
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR-EVDVIGIFR  312 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~  312 (366)
                      -+.+.++ .+..+...++.|..+-+-..+...++....++.+ .+.+.-+..
T Consensus        97 aAT~d~~-~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~  147 (223)
T 3dfz_A           97 VATNDQA-VNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTD  147 (223)
T ss_dssp             ECCCCTH-HHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEEEECT
T ss_pred             ECCCCHH-HHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECC
Confidence            9999774 4555555555787766554444444433333332 344444443

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.18  E-value=0.032  Score=48.48  Aligned_cols=82  Identities=15%  Similarity=0.266  Sum_probs=52.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-H---HcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +   +.+... .  .|. ++..+..+.+.++.+...
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-LSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-CCHHHHHHHHHHHHHHcC
Confidence            467899998 69999998888888899 688888887765432 2   234332 1  122 222333334444433222


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        98 g~id~lv~nAg~  109 (273)
T 1ae1_A           98 GKLNILVNNAGV  109 (273)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            679999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.18  E-value=0.038  Score=47.30  Aligned_cols=82  Identities=15%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---CC--cee--eecC-CCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL---GA--DET--AKVS-TDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l---g~--~~~--~~~~-~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+. ++   +.  ...  .|.. .+..+..+.+.++.+ 
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   88 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV-   88 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH-
Confidence            467899998 68999998888888899 6888888887654332 22   11  111  2221 222233333333333 


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                      ..+++|+++++.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence            23579999999884

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.18  E-value=0.019  Score=48.60  Aligned_cols=103  Identities=19%  Similarity=0.207  Sum_probs=67.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhC-
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMG-  254 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~-  254 (366)
                      ..++.+||-+|+| .|..++.+++..+ ..++++++.+++..+.+++    .|....+.+..  .+..+.+..+.. .. 
T Consensus        70 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~l~~l~~-~~~  145 (232)
T 3cbg_A           70 LTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL--GPALATLEQLTQ-GKP  145 (232)
T ss_dssp             HHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHHHHHHT-SSS
T ss_pred             hcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHh-cCC
Confidence            3467899999988 5889999999864 2389999999988777765    35432112111  233333333321 11 


Q ss_pred             -CCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793          255 -SGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 -~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                       ..||+|+-....   ...+..+.+.|+++|.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             579999854332   245778889999999988743

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.17  E-value=0.026  Score=48.22  Aligned_cols=82  Identities=17%  Similarity=0.265  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          181 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       181 ~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      -.++.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+ +++....... ..+-.+. +.+.++.+. -+++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~-~~~~~~~~~-~~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIE-VCNLANK-EECSNLISK-TSNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEE-ECCTTSH-HHHHHHHHT-CSCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEE-EcCCCCH-HHHHHHHHh-cCCCC
Confidence            35688999998 69999998888888898 688888888776644 3444322111 1221222 223333321 24799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999884

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.16  E-value=0.0052  Score=52.43  Aligned_cols=101  Identities=20%  Similarity=0.298  Sum_probs=62.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .|.++||.| ++++|.+..+.+...|+ +|+.+++++++.+...  +. .+..+..+-.+. +.++++.+. -+++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~--~~-~~~~~~~Dv~~~-~~v~~~~~~-~g~iDiLV   83 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPR--HP-RIRREELDITDS-QRLQRLFEA-LPRLDVLV   83 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCC--CT-TEEEEECCTTCH-HHHHHHHHH-CSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhh--cC-CeEEEEecCCCH-HHHHHHHHh-cCCCCEEE
Confidence            689999998 68999999888888999 7888888876654321  11 111111111121 223333332 35799999


Q ss_pred             EcCCCh--------H---------------HHHHHHHhh-cCCceEEEEccc
Q 017793          262 DCVGFD--------K---------------TMSTALNAT-RPGGKVCLIGLA  289 (366)
Q Consensus       262 d~~g~~--------~---------------~~~~~~~~l-~~~G~~v~~g~~  289 (366)
                      ++.|..        +               ..+.....| +.+|+++.++..
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            998753        1               223344455 357999988743

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.16  E-value=0.03  Score=48.22  Aligned_cols=80  Identities=20%  Similarity=0.342  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc-----CCc-eee--ecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GAD-ETA--KVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~~~--~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++     +.. ..+  |. ++..++.+.+.++.+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-REPGDIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-TCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-CCHHHHHHHHHHHHHh
Confidence            467899998 69999998888888899 688888887665433 222     212 111  22 2223333444444332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                        .++|+++++.|.
T Consensus        84 --~gid~lv~~Ag~   95 (260)
T 2z1n_A           84 --GGADILVYSTGG   95 (260)
T ss_dssp             --TCCSEEEECCCC
T ss_pred             --cCCCEEEECCCC
Confidence              239999999873

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=96.16  E-value=0.018  Score=50.16  Aligned_cols=103  Identities=15%  Similarity=0.202  Sum_probs=65.7

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ...++|++||=.|||+ |..++++++.+ +...|++++.++++.+.+++    +|...+.....   +.......+.. .
T Consensus        79 l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~---D~~~~~~~~~~-~  153 (274)
T 3ajd_A           79 LNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINA---DMRKYKDYLLK-N  153 (274)
T ss_dssp             HCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CHHHHHHHHHH-T
T ss_pred             hCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC---ChHhcchhhhh-c
Confidence            4578899999888765 66777888765 43589999999998877654    46543322222   22222111110 1


Q ss_pred             CCCCcEEEE---cCCC---------------------hHHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFD---CVGF---------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld---~~g~---------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...||.|+-   |.|.                     ...+..+++.|++||+++..
T Consensus       154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~s  210 (274)
T 3ajd_A          154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYS  210 (274)
T ss_dssp             TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            457999975   3331                     34577788899999998864

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.14  E-value=0.057  Score=48.28  Aligned_cols=130  Identities=15%  Similarity=0.146  Sum_probs=76.4

Q ss_pred             EEEEECCCHHHHHH-H-HHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMGSGPIGLVT-L-LAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G~g~vG~~a-i-~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +|.|+|+|.+|... + .+.+ .+++.+.++++++++.+ +++++|....  +    .++.    ++..  ...+|+|+.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~--~----~~~~----~~l~--~~~~D~V~i   68 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKS--V----TSVE----ELVG--DPDVDAVYV   68 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCC--B----SCHH----HHHT--CTTCCEEEE
T ss_pred             eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCcc--c----CCHH----HHhc--CCCCCEEEE
Confidence            68899999999875 5 4445 67744556678877664 4566775422  1    1222    2321  246999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech---H-hhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---P-AAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      ++....+...+..+|..| +-+++..+.........   . .-..++.+.-..  .+...++.+.+++++|.+
T Consensus        69 ~tp~~~h~~~~~~al~~G-k~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           69 STTNELHREQTLAAIRAG-KHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChhHhHHHHHHHHHCC-CeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCC
Confidence            999887888888888775 44444322111110111   1 112233333222  224567888888888877

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.14  E-value=0.039  Score=48.93  Aligned_cols=89  Identities=18%  Similarity=0.197  Sum_probs=64.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|+ +|++.+++.++ +.+.++|+...        ++.    ++.    ...|+|+.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~----ell----~~aDvV~l  202 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLE----TLL----KESDVVTI  202 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHH----HHH----HHCSEEEE
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHH----HHH----hhCCEEEE
Confidence            46799999999999999999999998 78999888776 56677776321        222    222    24899999


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEccc
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIGLA  289 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  289 (366)
                      +++...    .+ ...+..|++++.++.++..
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             ecCCChHHhhhcCHHHHhcCCCCeEEEECCCC
Confidence            887432    12 3466889999988887653

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=96.14  E-value=0.011  Score=50.80  Aligned_cols=99  Identities=11%  Similarity=0.106  Sum_probs=65.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH--hhC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN--AMG  254 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~--~~~  254 (366)
                      .+++.+||=+|+|. |..++.+++......|++++.+++..+++++    +|...+..+..   +..    ++..  ...
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~---d~~----~~~~~~~~~  149 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG---RAE----VLAREAGHR  149 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC---CHH----HHTTSTTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC---cHH----HhhcccccC
Confidence            35788999999875 7777888887654489999999998887764    46543322222   211    1111  013


Q ss_pred             CCCcEEEEcCCC--hHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVGF--DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..||+|+...-.  ...+..+.+.|+++|+++.+-
T Consensus       150 ~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          150 EAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             TCEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            579999874332  345667778999999988763

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=96.13  E-value=0.033  Score=47.13  Aligned_cols=102  Identities=11%  Similarity=0.120  Sum_probs=61.4

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHH----HHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLS----IARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ....+++|++||=+|||+ |..+..+++..| -..|++++.++...+    .+++..  .+.....+...... ..    
T Consensus        70 ~~~~l~~g~~VLDlG~Gt-G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~--nv~~i~~Da~~~~~-~~----  141 (232)
T 3id6_C           70 KTNPIRKGTKVLYLGAAS-GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRP--NIFPLLADARFPQS-YK----  141 (232)
T ss_dssp             SCCSCCTTCEEEEETCTT-SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCT--TEEEEECCTTCGGG-TT----
T ss_pred             hhcCCCCCCEEEEEeecC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcC--CeEEEEcccccchh-hh----
Confidence            335689999999999876 668888888765 348999999997643    233321  11111111111100 00    


Q ss_pred             hhCCCCcEEEEcCCChHH---H-HHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFDCVGFDKT---M-STALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~---~-~~~~~~l~~~G~~v~~  286 (366)
                      .....+|+|+-....+..   + ..+.+.|++||+++..
T Consensus       142 ~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis  180 (232)
T 3id6_C          142 SVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV  180 (232)
T ss_dssp             TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence            013579999876654322   2 2333489999999875

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.13  E-value=0.085  Score=46.54  Aligned_cols=88  Identities=19%  Similarity=0.184  Sum_probs=60.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      .+|.|+|+|.+|......+...|. .|++.++++++.+.+.+.|......  + ..+       .    -...|+||-|+
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~--~-~~e-------~----~~~aDvvi~~v   72 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAA--S-ARE-------F----AGVVDALVILV   72 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEES--S-STT-------T----TTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccC--C-HHH-------H----HhcCCEEEEEC
Confidence            579999999999988888888898 7888999999998888877654111  1 011       1    23578888888


Q ss_pred             CChHHHHHHH-------HhhcCCceEEEEc
Q 017793          265 GFDKTMSTAL-------NATRPGGKVCLIG  287 (366)
Q Consensus       265 g~~~~~~~~~-------~~l~~~G~~v~~g  287 (366)
                      ..+......+       ..++++..++..+
T Consensus        73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             SSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred             CCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence            8754444443       3455655555544

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=96.12  E-value=0.012  Score=50.58  Aligned_cols=102  Identities=19%  Similarity=0.186  Sum_probs=69.3

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHh
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ..+.....+++.+||-+|||. |..+..+++......+++++.+++..+.+++.... ..+.  .+..++.         
T Consensus        24 ~l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~--~d~~~~~---------   91 (259)
T 2p35_A           24 DLLAQVPLERVLNGYDLGCGP-GNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGK--ADLATWK---------   91 (259)
T ss_dssp             HHHTTCCCSCCSSEEEETCTT-THHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEE--CCTTTCC---------
T ss_pred             HHHHhcCCCCCCEEEEecCcC-CHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEE--CChhhcC---------
Confidence            444556678899999999875 88888888876333799999999988888775221 1111  1111111         


Q ss_pred             hCCCCcEEEEcCC------ChHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....||+|+.+..      -...+..+.+.|+++|.++...
T Consensus        92 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A           92 PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence            1457999987542      1345677888999999988753

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.12  E-value=0.012  Score=50.48  Aligned_cols=99  Identities=15%  Similarity=0.274  Sum_probs=68.5

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ..++++.+||-+|||. |..+..+++..+. .+++++.+++..+.+++    .|... +.....+..++.        ..
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~  111 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP--------FQ  111 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS--------SC
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC--------CC
Confidence            3678899999999886 8899999998876 89999999988777654    34321 111111111111        01


Q ss_pred             CCCCcEEEEc-----CCChHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDC-----VGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~-----~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...||+|+..     .+....+..+.+.|+|+|+++...
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            3579999653     333457788889999999998764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.11  E-value=0.037  Score=48.51  Aligned_cols=80  Identities=24%  Similarity=0.390  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+. +++.. +..+..+-.+. +.++++.+.. +++|++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~Dl~d~-~~v~~~~~~~-~~iD~l   90 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQ-VEVRELDLQDL-SSVRRFADGV-SGADVL   90 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSE-EEEEECCTTCH-HHHHHHHHTC-CCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCC-eeEEEcCCCCH-HHHHHHHHhc-CCCCEE
Confidence            478899998 69999998888888899 7888888887766543 34332 22121222222 2233333322 479999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +.+.|.
T Consensus        91 v~nAg~   96 (291)
T 3rd5_A           91 INNAGI   96 (291)
T ss_dssp             EECCCC
T ss_pred             EECCcC
Confidence            999884

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.11  E-value=0.015  Score=51.78  Aligned_cols=98  Identities=13%  Similarity=0.134  Sum_probs=65.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.        +.+....   .+..+.+..    .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~---~D~~~~l~~----~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC---GDGFEFLKN----H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC---SCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE---ChHHHHHHh----c
Confidence            4568999999775 7778888887655589999999999888876421        1111111   233333322    2


Q ss_pred             CCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...||+|+-....          ...+..+.+.|+++|.++...
T Consensus       179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            4679999854421          346778889999999998754

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.10  E-value=0.013  Score=50.86  Aligned_cols=81  Identities=21%  Similarity=0.183  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+..-.... ..|. ++..++.+.+.++.+. -+++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDV-TDKYTFDTAITRAEKI-YGPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCT-TCHHHHHHHHHHHHHH-HCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecC-CCHHHHHHHHHHHHHH-CCCCCEE
Confidence            357899998 68999998888888899 6777778776654322111111 1122 2223344444444332 2479999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +++.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.10  E-value=0.076  Score=46.61  Aligned_cols=104  Identities=16%  Similarity=0.194  Sum_probs=62.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh--hHHH----HHHHcCCceeeecCC---CCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QRLS----IARNLGADETAKVST---DIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~--~~~~----~~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.  ++.+    .+++.+.... .+..   +..+..+.+.++.+.
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAV-LLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEE-ECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEE-EEEecCCCHHHHHHHHHHHHHH
Confidence            468899998 68999998888888899 677766552  2222    2234453322 1111   222333333333332


Q ss_pred             hCCCCcEEEEcCCCh-----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          253 MGSGIDVSFDCVGFD-----------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       253 ~~~~~d~vld~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                       -+++|+++.+.|..           +               ..+.++..+.++|+++.++..
T Consensus       126 -~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~  187 (294)
T 3r3s_A          126 -LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI  187 (294)
T ss_dssp             -HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred             -cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence             24799999998741           0               223344566778999988753

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=96.10  E-value=0.017  Score=49.06  Aligned_cols=104  Identities=15%  Similarity=0.171  Sum_probs=69.5

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      ..++..+++++.+||-+|||. |..+..+++. +. .+++++.+++..+.+++    .+...+.....+..++.      
T Consensus        12 ~~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------   82 (239)
T 1xxl_A           12 LMIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP------   82 (239)
T ss_dssp             HHHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC------
T ss_pred             hHHHHhCcCCCCEEEEEccCc-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC------
Confidence            345667789999999999887 8888888876 34 89999999987776654    24332211111111111      


Q ss_pred             HHhhCCCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEcc
Q 017793          250 QNAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                        .....||+|+....-      ...+..+.+.|+++|.++....
T Consensus        83 --~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           83 --FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             --SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence              013579999876321      3467888899999999988653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.10  E-value=0.046  Score=46.77  Aligned_cols=80  Identities=18%  Similarity=0.088  Sum_probs=53.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eec-CCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKV-STDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+|||.| ++++|.+.++.+...|+ +|+.+++++++.+.+.+-+.... +.. .++..+..+.+.+..+. -+++|+++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~-~g~iDiLV   80 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK-LQRIDVLV   80 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence            5789998 68999998888888999 78888899888776655443321 111 12233444444444332 25799999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      ++.|.
T Consensus        81 NNAG~   85 (247)
T 3ged_A           81 NNACR   85 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.10  E-value=0.091  Score=47.36  Aligned_cols=81  Identities=26%  Similarity=0.326  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-----------HHHHHHcCCcee---eecCCCCcchHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-----------LSIARNLGADET---AKVSTDIEDVDTDVG  247 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~~---~~~~~~~~~~~~~~~  247 (366)
                      .+.++||.| ++++|.+.++.+...|+ .|+.+++++++           .+.+++.+....   .|. ++.+++.+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv-~d~~~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDV-RDEQQISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccC-CCHHHHHHHHH
Confidence            478899998 68999998888888899 67777666543           233344454321   122 22334444444


Q ss_pred             HHHHhhCCCCcEEEEcCCC
Q 017793          248 KIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~  266 (366)
                      ++.+.. +++|+++++.|.
T Consensus       122 ~~~~~~-g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKF-GGIDILVNNASA  139 (346)
T ss_dssp             HHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHc-CCCCEEEECCCC
Confidence            444322 479999999984

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.08  E-value=0.023  Score=49.12  Aligned_cols=102  Identities=18%  Similarity=0.207  Sum_probs=68.7

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eeeecCCCCcchHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ++...++++.+||-+|||. |..+..+++..+. .+++++.+++..+.+++.    +.. .+.....+..++.       
T Consensus        54 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------  124 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-------  124 (273)
T ss_dssp             HHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-------
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-------
Confidence            3567788999999999886 8888899988787 899999999877766542    432 1111111111110       


Q ss_pred             HhhCCCCcEEEEcC-----CC-hHHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                       ...+.||+|+..-     .. ...+..+.+.|+++|+++...
T Consensus       125 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          125 -FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             -SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             -CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence             0135799997532     21 346778888999999988764

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=96.06  E-value=0.0076  Score=53.25  Aligned_cols=98  Identities=16%  Similarity=0.124  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--------CceeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--------ADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ..+.+||++|+|. |..+..+++..+...|++++.+++..+.+++.-        .+.+....   .+..+.+    ...
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~l----~~~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAEYV----RKF  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHG----GGC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHH----hhC
Confidence            3468999998775 777788888766668999999999888877632        11111111   2222221    112


Q ss_pred             CCCCcEEEEcCCC-----------hHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGF-----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~-----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...||+|+-....           ...+..+.+.|+++|.++...
T Consensus       161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  205 (296)
T 1inl_A          161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  205 (296)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4579999743211           356778889999999998763

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=96.05  E-value=0.042  Score=44.46  Aligned_cols=102  Identities=12%  Similarity=0.230  Sum_probs=67.6

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCce--eeecCCCCcchHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADE--TAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~--~~~~~~~~~~~~~~~~~  248 (366)
                      .++....+++.+||-+|+|. |..+..+++. +. .+++++.+++..+.+++.    +...  +.....+   +....  
T Consensus        44 l~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d---~~~~~--  115 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD---LYENV--  115 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS---TTTTC--
T ss_pred             HHHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECc---hhccc--
Confidence            34556677899999999875 7788888887 65 899999999887776653    4331  2111121   11111  


Q ss_pred             HHHhhCCCCcEEEEcCCC-------hHHHHHHHHhhcCCceEEEEcc
Q 017793          249 IQNAMGSGIDVSFDCVGF-------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~-------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                          ....+|+|+....-       ...+..+.+.|+++|.++....
T Consensus       116 ----~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          116 ----KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             ----TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ----ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence                13579999875431       2456677888999999887643

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=96.05  E-value=0.025  Score=47.53  Aligned_cols=103  Identities=16%  Similarity=0.178  Sum_probs=65.8

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcC--CceeeecCCCCcchHHHHHHHHHhhC
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ...++++++||-+|+|. |..+..+++..|. ..|++++.+++..+.+++.-  .+.+.....+..+.. .   .. ...
T Consensus        68 ~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~---~~-~~~  141 (227)
T 1g8a_A           68 NFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE-E---YR-ALV  141 (227)
T ss_dssp             CCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG-G---GT-TTC
T ss_pred             hcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcc-h---hh-ccc
Confidence            34578999999999887 8888999988652 48999999997665544321  111111111111110 0   00 013


Q ss_pred             CCCcEEEEcCCCh----HHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVGFD----KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+|+|+.....+    ..+..+.+.|+++|.++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            4799998766543    2377788999999998876

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.05  E-value=0.091  Score=45.91  Aligned_cols=87  Identities=14%  Similarity=0.126  Sum_probs=59.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      .+|.|+|+|.+|....+.+...|. .|++.++++++.+.+.+.|....       .+..+.+        ...|+||.|+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVV--------ESCPVTFAML   65 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------hcCCEEEEEc
Confidence            478999999999988888888898 78888999998888877765321       1222222        2368888888


Q ss_pred             CChHHHHHHH-------HhhcCCceEEEEc
Q 017793          265 GFDKTMSTAL-------NATRPGGKVCLIG  287 (366)
Q Consensus       265 g~~~~~~~~~-------~~l~~~G~~v~~g  287 (366)
                      ..+......+       ..++++..++..+
T Consensus        66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             SSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            8654444443       4556666665554

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.03  E-value=0.037  Score=48.86  Aligned_cols=81  Identities=26%  Similarity=0.376  Sum_probs=52.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+.    +.+... .  .|. ++..++.+.+.++.+. .
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~  106 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-RHLDEMVRLADEAFRL-L  106 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHh-C
Confidence            578999998 68999998888888899 6888888887655432    223332 1  222 2223343444443332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       107 g~id~lvnnAg~  118 (301)
T 3tjr_A          107 GGVDVVFSNAGI  118 (301)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999884

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.03  E-value=0.018  Score=52.25  Aligned_cols=47  Identities=23%  Similarity=0.285  Sum_probs=40.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA  229 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~  229 (366)
                      -.|.+|+|.|.|.+|..+++.+...|+ +|++.+.+.++.+ +++++++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga  218 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGA  218 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCC
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence            468999999999999999999999999 6888998888766 5566665

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=96.02  E-value=0.085  Score=43.88  Aligned_cols=97  Identities=10%  Similarity=0.053  Sum_probs=64.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.+||=+|||. |..++.+|+......+++++.+++..+.+++    .+.+.+.....+..+    +....  ....+|
T Consensus        38 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~----l~~~~--~~~~~d  110 (213)
T 2fca_A           38 DNPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT----LTDVF--EPGEVK  110 (213)
T ss_dssp             CCCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG----HHHHC--CTTSCC
T ss_pred             CCceEEEEecCC-CHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH----HHhhc--CcCCcC
Confidence            567888889886 8888999998643489999999988776654    454433222222222    21111  135689


Q ss_pred             EEEEcCCC--------------hHHHHHHHHhhcCCceEEEE
Q 017793          259 VSFDCVGF--------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       259 ~vld~~g~--------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .|+-....              ...+..+.+.|+++|.++..
T Consensus       111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~  152 (213)
T 2fca_A          111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  152 (213)
T ss_dssp             EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence            88754432              34688889999999998865

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.02  E-value=0.039  Score=47.35  Aligned_cols=81  Identities=26%  Similarity=0.277  Sum_probs=52.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .  .|. ++..++.+.++++.+. -+++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~i   80 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDV-TIEEDWQRVVAYAREE-FGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCT-TCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecC-CCHHHHHHHHHHHHHH-cCCC
Confidence            467899998 69999998888888899 688888887765543 4444321 1  122 2223344444443332 2479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        81 D~lv~nAg~   89 (254)
T 1hdc_A           81 DGLVNNAGI   89 (254)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.02  E-value=0.03  Score=52.75  Aligned_cols=92  Identities=20%  Similarity=0.217  Sum_probs=67.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      -.|.+|+|+|.|.+|..+++.++.+|+ +|++.+++..+...+...|...        .+    +.++    -...|+|+
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~--------~~----l~el----l~~aDiVi  337 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV--------VT----MEYA----ADKADIFV  337 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSEEE
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe--------CC----HHHH----HhcCCEEE
Confidence            468999999999999999999999999 7999998887753444455431        11    2222    24689999


Q ss_pred             EcCCChHHH-HHHHHhhcCCceEEEEcccC
Q 017793          262 DCVGFDKTM-STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       262 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  290 (366)
                      .++++...+ ...+..|+++..++.++...
T Consensus       338 ~~~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          338 TATGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             ECSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             ECCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            998765444 35678899999888887543

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=96.02  E-value=0.027  Score=49.27  Aligned_cols=99  Identities=16%  Similarity=0.157  Sum_probs=66.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ..++.+||++|+|. |..+..+++..+..++++++.+++-.+.+++.-.        +.+....   .+..+.+..    
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~l~~----  147 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI---EDASKFLEN----  147 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE---SCHHHHHHH----
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE---CChHHHHHh----
Confidence            45678999999765 6677788876655689999999998888876421        1111111   233332222    


Q ss_pred             hCCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....+|+|+-....          ...+..+.+.|+++|.++...
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          148 VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            25679999753210          356788889999999998764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.01  E-value=0.029  Score=49.53  Aligned_cols=94  Identities=15%  Similarity=0.169  Sum_probs=61.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCc--eeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.+++|+|+|++|.+++..+...|+..|.+++++.++.+ ++++++..  .+.+       + ..+.+.    -..+|+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~-~~~~~~----~~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------L-AEAETR----LAEYDI  207 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------H-HHHHHT----GGGCSE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------H-HHHHhh----hccCCE
Confidence            5789999999999999999998899877888888888754 55666642  1111       1 112221    246999


Q ss_pred             EEEcCCChHHH-----HHHHHhhcCCceEEEEcc
Q 017793          260 SFDCVGFDKTM-----STALNATRPGGKVCLIGL  288 (366)
Q Consensus       260 vld~~g~~~~~-----~~~~~~l~~~G~~v~~g~  288 (366)
                      |++|++.....     ......++++..++.+..
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            99999864210     011234556666666654

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.01  E-value=0.065  Score=47.94  Aligned_cols=129  Identities=19%  Similarity=0.249  Sum_probs=80.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +|.|+|+|.+|...+..++.. +++.+.+.+.++++.+ +++++|..    +    .++.+    +.+  ...+|+|+.|
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~----~~~~~----~l~--~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----V----RTIDA----IEA--AADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----E----CCHHH----HHH--CTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----c----CCHHH----Hhc--CCCCCEEEEe
Confidence            688999999998777766654 6644446778877755 45667764    2    12322    222  3479999999


Q ss_pred             CCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          264 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       264 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      +....+...+..++..+-. +++..+.........    ..-..++.+.-.+  .+...++.+.+++++|.+
T Consensus        71 tp~~~h~~~~~~al~~gk~-v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           71 TPTDTHADLIERFARAGKA-IFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHHHcCCc-EEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCC
Confidence            9988888888888877654 445432211111111    1222333333222  236678889999999887

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=96.00  E-value=0.0091  Score=49.54  Aligned_cols=98  Identities=17%  Similarity=0.301  Sum_probs=65.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++++.+||-+|||. |..+..+++. |...+++++.+++..+.+++....  .+.....+..++.     +   ....+|
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~-----~---~~~~fD  109 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD-----F---PSASFD  109 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC-----S---CSSCEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC-----C---CCCccc
Confidence            57889999999876 8888888876 554799999999998888775321  1111111111110     1   135699


Q ss_pred             EEEEcCCC---------------------hHHHHHHHHhhcCCceEEEEcc
Q 017793          259 VSFDCVGF---------------------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       259 ~vld~~g~---------------------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +|+....-                     ...+..+.+.|+++|+++....
T Consensus       110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  160 (215)
T 2pxx_A          110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS  160 (215)
T ss_dssp             EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             EEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence            99863211                     3456778889999999988754

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.00  E-value=0.024  Score=47.46  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=67.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhh-
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAM-  253 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~-  253 (366)
                      ..++.+||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+... +....   .+..+.+..+.... 
T Consensus        62 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~~  137 (225)
T 3tr6_A           62 LMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIHAGQ  137 (225)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHTTTC
T ss_pred             hhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhhccC
Confidence            45678999999876 888999998764 4489999999988777655    35432 21111   23333333332100 


Q ss_pred             CCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...||+|+-....   ...+..+.+.|++||.++.-.
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            1679999854432   235678889999999988643

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.00  E-value=0.036  Score=49.72  Aligned_cols=100  Identities=19%  Similarity=0.222  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC------C--ceeeecCCCCcchHHHHHHHHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------A--DETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~--~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ..+.+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-      .  +.+....   .+..+.+...  
T Consensus       117 ~~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~---~D~~~~l~~~--  190 (334)
T 1xj5_A          117 SIPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---GDGVAFLKNA--  190 (334)
T ss_dssp             TSSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---SCHHHHHHTS--
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE---CCHHHHHHhc--
Confidence            345678999999775 777888888765558999999999888877632      1  1111111   2333322211  


Q ss_pred             hhCCCCcEEEEcCC----------ChHHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ....||+|+-...          ....+..+.+.|+++|.++..
T Consensus       191 -~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          191 -AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             -CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence             1357999986332          245778889999999999875

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.00  E-value=0.064  Score=48.49  Aligned_cols=131  Identities=11%  Similarity=0.072  Sum_probs=81.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      -+|.|+|+|.+|...+..++.. +++.+.+.++++++.+ +++++|+..   +    .++.+    +.+  ...+|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~----~~~~~----~l~--~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D----ATMEA----LLA--REDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C----SSHHH----HHH--CSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c----CCHHH----Hhc--CCCCCEEEE
Confidence            4789999999998777766655 6644556678877765 456677643   2    23332    322  457999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEE-Ee-eccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVI-GI-FRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~g~~  329 (366)
                      |++...+...+..++..|-. +++.-+.........    ..-..++.+. +. ..+...++.+.+++++|.+
T Consensus        73 ~tp~~~h~~~~~~al~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARSGKH-IYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             CSCTTSHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHcCCE-EEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCC
Confidence            99988888888888887655 444322111111111    1122233332 22 2336678889999999888

>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}

Probab=96.00  E-value=0.044  Score=51.74  Aligned_cols=97  Identities=20%  Similarity=0.298  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++|++||=+|||+ |..++++|+.++ ...|++++.++++.+.+++    +|...+.....+..++...       ....
T Consensus       116 ~~g~~VLDl~aGp-G~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~-------~~~~  187 (479)
T 2frx_A          116 NAPQRVMDVAAAP-GSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA-------VPEM  187 (479)
T ss_dssp             CCCSEEEESSCTT-SHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH-------STTC
T ss_pred             CCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh-------cccc
Confidence            4899999888766 677778888764 3489999999998877654    5665433333333332211       1457


Q ss_pred             CcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          257 IDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       257 ~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      ||.|+-   |+|..                         ..+..+++.|++||+++..
T Consensus       188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvys  245 (479)
T 2frx_A          188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYS  245 (479)
T ss_dssp             EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence            999976   54421                         2456677899999998864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=95.98  E-value=0.13  Score=46.77  Aligned_cols=93  Identities=12%  Similarity=0.193  Sum_probs=63.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      -+|+|+|+|.+|..+++.+.. .. .|.+++.+.++.+.+++......+|.    .+. +.+.++.    .+.|+|+.|+
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~----~d~-~~l~~~~----~~~DvVi~~~   85 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDA----SNF-DKLVEVM----KEFELVIGAL   85 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCT----TCH-HHHHHHH----TTCSEEEECC
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEec----CCH-HHHHHHH----hCCCEEEEec
Confidence            479999999999988887754 33 57777888888887765432222222    122 2333332    4689999999


Q ss_pred             CChHHHHHHHHhhcCCceEEEEcc
Q 017793          265 GFDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       265 g~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +..-+...+-.++..+-.++.+..
T Consensus        86 p~~~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           86 PGFLGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             CGGGHHHHHHHHHHHTCEEEECCC
T ss_pred             CCcccchHHHHHHhcCcceEeeec
Confidence            976566666677788888887653

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.98  E-value=0.021  Score=49.44  Aligned_cols=96  Identities=24%  Similarity=0.295  Sum_probs=64.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHC---CCCeEEEEcCChhHHHHHHH----cCCceeeec-CCCCcchHHHHHHHHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAF---GAPRIIITDVDVQRLSIARN----LGADETAKV-STDIEDVDTDVGKIQN  251 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~---g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~-~~~~~~~~~~~~~~~~  251 (366)
                      .+++|.+||-+|||. |..+..+++..   |+ +|++++.+++-.+.+++    .+...-+.+ ..+..+       +  
T Consensus        67 ~~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~-------~--  135 (261)
T 4gek_A           67 FVQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD-------I--  135 (261)
T ss_dssp             HCCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT-------C--
T ss_pred             hCCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc-------c--
Confidence            378999999999876 88888888875   45 79999999987777664    343211111 111111       1  


Q ss_pred             hhCCCCcEEEEcCCC-----h---HHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDCVGF-----D---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~~g~-----~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                       ....+|+|+.+..-     .   ..+..+.+.|+|||++++..
T Consensus       136 -~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e  178 (261)
T 4gek_A          136 -AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE  178 (261)
T ss_dssp             -CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence             12458888764321     1   35778889999999998764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=95.97  E-value=0.067  Score=44.56  Aligned_cols=90  Identities=13%  Similarity=0.175  Sum_probs=57.4

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +|||.| +|.+|...++.+...|. .|+++.+++++.+.+...+...+ .|+..  .+.    ..+     .++|+||.+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d--~~~----~~~-----~~~d~vi~~   69 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV--LTE----ADL-----DSVDAVVDA   69 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG--CCH----HHH-----TTCSEEEEC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc--ccH----hhc-----ccCCEEEEC
Confidence            589998 59999999988888898 78888888877665433333322 12211  111    112     479999999


Q ss_pred             CCCh----------HHHHHHHHhhc-CCceEEEEc
Q 017793          264 VGFD----------KTMSTALNATR-PGGKVCLIG  287 (366)
Q Consensus       264 ~g~~----------~~~~~~~~~l~-~~G~~v~~g  287 (366)
                      .|..          .....+++.+. .+++++.++
T Consensus        70 ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           70 LSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             CCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             CccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence            9862          12233445443 347888875

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.97  E-value=0.088  Score=46.78  Aligned_cols=91  Identities=20%  Similarity=0.175  Sum_probs=62.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCCceeeecCCCCcchHH-HHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT-DVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~vld  262 (366)
                      .+|.|+|+|.+|...++.++..|.. .|++.++++++.+.+.++|......  .   +..+ .        -..+|+||-
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~--~---~~~~~~--------~~~aDvVil  100 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--T---SIAKVE--------DFSPDFVML  100 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--S---CTTGGG--------GGCCSEEEE
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc--C---CHHHHh--------hccCCEEEE
Confidence            6899999999999988888888873 6888999999999888888631111  1   1111 1        135899999


Q ss_pred             cCCChH---HHHHHHHhhcCCceEEEEcc
Q 017793          263 CVGFDK---TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~~---~~~~~~~~l~~~G~~v~~g~  288 (366)
                      |+....   .+......++++..++.++.
T Consensus       101 avp~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          101 SSPVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             CSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             eCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            988653   23344455667766666553

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.97  E-value=0.04  Score=46.46  Aligned_cols=81  Identities=22%  Similarity=0.233  Sum_probs=50.7

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecC-CCCcchHHHHHHHHHhhCCCCcEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+ ++++.-..+..+ .+..++.+.+.++.+.. +++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAF-GELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            46799998 69999998888888898 688888887766543 334311222111 22233333333333222 479999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +.+.|.
T Consensus        83 i~~Ag~   88 (234)
T 2ehd_A           83 VNNAGV   88 (234)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.96  E-value=0.025  Score=47.52  Aligned_cols=97  Identities=13%  Similarity=0.256  Sum_probs=65.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc---------eeeecCCCCcchHHHHHHHHH
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD---------ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~---------~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ++++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++....         .+.....+..++.        
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------   96 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--------   96 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--------
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--------
Confidence            56889999999886 8888888887 77 899999999988888774321         1111111111110        


Q ss_pred             hhCCCCcEEEEcCC-----Ch----HHHHHHHHhhcCCceEEEEcc
Q 017793          252 AMGSGIDVSFDCVG-----FD----KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       252 ~~~~~~d~vld~~g-----~~----~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      .....+|+|+....     ..    ..+..+.+.|+++|+++....
T Consensus        97 ~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  142 (235)
T 3sm3_A           97 FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF  142 (235)
T ss_dssp             SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence            01457999986421     22    467788899999999988753

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.95  E-value=0.022  Score=49.19  Aligned_cols=83  Identities=17%  Similarity=0.286  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC---CCeEEEEcCChhHHHHHHHc---CCce-eeecC-CCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFG---APRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g---~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|.+|...++.+...|   . .|+.++++.++.+.++++   +... .+..+ ++.+.+.+.+.++.+..
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            467899998 6999999888888888   6 788887776644433332   3221 11111 23344444444444322


Q ss_pred             CC-CCcEEEEcCCC
Q 017793          254 GS-GIDVSFDCVGF  266 (366)
Q Consensus       254 ~~-~~d~vld~~g~  266 (366)
                      +. ++|++|.+.|.
T Consensus        99 g~~~id~li~~Ag~  112 (267)
T 1sny_A           99 KDQGLNVLFNNAGI  112 (267)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             CCCCccEEEECCCc
Confidence            32 69999999873

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=95.94  E-value=0.069  Score=45.89  Aligned_cols=81  Identities=22%  Similarity=0.377  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-ee--ecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TA--KVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.++++.++.+ .+++++... .+  |. ++..+..+.+.++.+. -+++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~-~g~i   83 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDV-TRQDSIDAAIAATVEH-AGGL   83 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCT-TCHHHHHHHHHHHHHH-SSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeC-CCHHHHHHHHHHHHHH-cCCC
Confidence            467899998 69999998888888899 6888888877655 344555432 11  22 2223334444444332 3579


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        84 d~lv~~Ag~   92 (259)
T 4e6p_A           84 DILVNNAAL   92 (259)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999885

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.94  E-value=0.026  Score=49.60  Aligned_cols=98  Identities=13%  Similarity=0.184  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHHhhC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .++++.+||-+|||. |..+..+++..|+ .+++++.+++..+.+++    .|.. .+.....+..++.     +   ..
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~---~~  148 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-----C---ED  148 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----S---CT
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-----C---CC
Confidence            788999999999874 8888889988787 89999999987776654    3332 1111111111110     0   13


Q ss_pred             CCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +.||+|+....-      ...+..+.+.|+|+|+++...
T Consensus       149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            569999865321      346788889999999998764

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.93  E-value=0.052  Score=45.96  Aligned_cols=95  Identities=13%  Similarity=0.073  Sum_probs=65.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .++++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++. . ..+.     .+....+.   ....+.||+
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~-~~~~-----~d~~~~~~---~~~~~~fD~  104 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-F-NVVK-----SDAIEYLK---SLPDKYLDG  104 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-S-EEEC-----SCHHHHHH---TSCTTCBSE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-c-ceee-----ccHHHHhh---hcCCCCeeE
Confidence            367889999999875 6677777776 77 699999999998888776 1 2211     12222111   112467999


Q ss_pred             EEEcC-----CC---hHHHHHHHHhhcCCceEEEEc
Q 017793          260 SFDCV-----GF---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       260 vld~~-----g~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      |+...     ..   ...+..+.+.|+++|.++...
T Consensus       105 i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A          105 VMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             EEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             EEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            98632     21   256778889999999988753

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=95.93  E-value=0.0088  Score=52.68  Aligned_cols=45  Identities=27%  Similarity=0.352  Sum_probs=37.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  227 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  227 (366)
                      .++.+||-+|||. |..++.+++..+...|++++.+++-.+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            3678999999886 88999999988666999999999888777663

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=95.93  E-value=0.1  Score=45.01  Aligned_cols=81  Identities=17%  Similarity=0.216  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCC----cee--e--ecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGA----DET--A--KVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~----~~~--~--~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+++++++++.+. .+++..    ..+  +  |. ++..++.+.+.++.+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV-ADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCC-CCHHHHHHHHHHHHHH
Confidence            467899998 69999998888888898 67788787766543 233321    111  1  22 2223333344333322


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+++|+++++.|.
T Consensus        84 -~g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 -FGRLDILVNNAGV   96 (267)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -cCCCCEEEECCCC
Confidence             2479999999874

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=95.92  E-value=0.03  Score=46.77  Aligned_cols=97  Identities=12%  Similarity=0.100  Sum_probs=58.8

Q ss_pred             CEEEEEC-CCHHHHHHHHHHH-HCCCCeEEEEcCChh-HHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          185 TNVMIMG-SGPIGLVTLLAAR-AFGAPRIIITDVDVQ-RLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~-~~g~~~vv~v~~~~~-~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+|||.| +|.+|...++.+. ..|+ .|++++++++ +.+.+.+.+.. ..+.  .+-.+. +.+.+..    .++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~--~D~~d~-~~~~~~~----~~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIE--GSFQNP-GXLEQAV----TNAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEE--CCTTCH-HHHHHHH----TTCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEE--CCCCCH-HHHHHHH----cCCCEE
Confidence            3599999 6999998888777 7899 7888888877 65544322222 1221  111222 2333332    379999


Q ss_pred             EEcCCChHH-HHHHHHhhcC--CceEEEEccc
Q 017793          261 FDCVGFDKT-MSTALNATRP--GGKVCLIGLA  289 (366)
Q Consensus       261 ld~~g~~~~-~~~~~~~l~~--~G~~v~~g~~  289 (366)
                      +.+.|.... ....++.+..  .++++.++..
T Consensus        78 v~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           78 FVGAMESGSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             EESCCCCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             EEcCCCCChhHHHHHHHHHhcCCCeEEEEeec
Confidence            999986311 3444455533  3688877643

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=95.91  E-value=0.046  Score=46.77  Aligned_cols=81  Identities=21%  Similarity=0.328  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCce--e--eecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L-----GADE--T--AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l-----g~~~--~--~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+.+ +     +...  .  .|. ++..+..+.+.++.+
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-TDCTKADTEIKDIHQ   83 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-CCHHHHHHHHHHHHH
Confidence            467899998 68999988888777899 78888888876554322 2     2121  1  122 222334444444433


Q ss_pred             hhCCCCcEEEEcCCC
Q 017793          252 AMGSGIDVSFDCVGF  266 (366)
Q Consensus       252 ~~~~~~d~vld~~g~  266 (366)
                      . -+++|+++++.|.
T Consensus        84 ~-~g~iD~lvnnAg~   97 (250)
T 3nyw_A           84 K-YGAVDILVNAAAM   97 (250)
T ss_dssp             H-HCCEEEEEECCCC
T ss_pred             h-cCCCCEEEECCCc
Confidence            2 2479999999985

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.91  E-value=0.097  Score=45.93  Aligned_cols=86  Identities=14%  Similarity=0.191  Sum_probs=59.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .+..+.+        ..+|+|+.|++
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~D~vi~~v~   70 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIA--------EQCDVIITMLP   70 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHH--------HHCSEEEECCS
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHH--------hCCCEEEEECC
Confidence            79999999999988888777888 6888889988888777766422   1    1222221        14799999998


Q ss_pred             ChHHHHHHH-------HhhcCCceEEEEc
Q 017793          266 FDKTMSTAL-------NATRPGGKVCLIG  287 (366)
Q Consensus       266 ~~~~~~~~~-------~~l~~~G~~v~~g  287 (366)
                      .+......+       ..+.++..++.++
T Consensus        71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           71 NSPHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence            665445444       4566776666554

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.91  E-value=0.092  Score=46.75  Aligned_cols=89  Identities=17%  Similarity=0.228  Sum_probs=61.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      ..+|.|+|+|.+|....+.+...|. .|.+.++++++.+.+.+.|+...       .+..    +..    ...|+||-|
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~----e~~----~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQAR----AAA----RDADIVVSM   94 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHH----HHH----TTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHH----HHH----hcCCEEEEE
Confidence            4589999999999988888888898 78889999999888777665321       1111    121    357888888


Q ss_pred             CCChHHHHHHH------HhhcCCceEEEEcc
Q 017793          264 VGFDKTMSTAL------NATRPGGKVCLIGL  288 (366)
Q Consensus       264 ~g~~~~~~~~~------~~l~~~G~~v~~g~  288 (366)
                      +..+......+      ..+.++..++..+.
T Consensus        95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           95 LENGAVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CSSHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             CCCHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            88654444443      34566666666543

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.90  E-value=0.032  Score=52.37  Aligned_cols=93  Identities=23%  Similarity=0.215  Sum_probs=68.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      --.|.+|+|+|.|.+|..+++.++..|+ +|++++++..+...+...|...        .+    +.++    -...|+|
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~--------~~----l~el----l~~aDiV  316 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV--------VT----LDEI----VDKGDFF  316 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCEe--------cC----HHHH----HhcCCEE
Confidence            3468999999999999999999999999 8999999887754445556521        11    2222    2468999


Q ss_pred             EEcCCChHHH-HHHHHhhcCCceEEEEcccC
Q 017793          261 FDCVGFDKTM-STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       261 ld~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +-+.++...+ ...+..|+++..++.++...
T Consensus       317 i~~~~t~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          317 ITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             EECCChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            9987665444 35667889999888887543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.90  E-value=0.057  Score=47.90  Aligned_cols=84  Identities=14%  Similarity=0.141  Sum_probs=52.8

Q ss_pred             HHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC---hhHHHH-HHHc----CCc-eeeecCCCCcchH
Q 017793          174 HACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---VQRLSI-ARNL----GAD-ETAKVSTDIEDVD  243 (366)
Q Consensus       174 ~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~---~~~~~~-~~~l----g~~-~~~~~~~~~~~~~  243 (366)
                      .+++...+. .+.++||+|+|++|.+++..+...|+..|.++.++   .++.+. ++++    +.. ..+.+.    +. 
T Consensus       143 ~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~----~~-  217 (315)
T 3tnl_A          143 RALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIE----DH-  217 (315)
T ss_dssp             HHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETT----CH-
T ss_pred             HHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccc----hH-
Confidence            445443333 57899999999999999998889999778888787   555543 3333    221 122221    11 


Q ss_pred             HHHHHHHHhhCCCCcEEEEcCCC
Q 017793          244 TDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      +.+.+..    ..+|+||+|.+.
T Consensus       218 ~~l~~~l----~~aDiIINaTp~  236 (315)
T 3tnl_A          218 EQLRKEI----AESVIFTNATGV  236 (315)
T ss_dssp             HHHHHHH----HTCSEEEECSST
T ss_pred             HHHHhhh----cCCCEEEECccC
Confidence            1222221    359999999874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.90  E-value=0.096  Score=44.50  Aligned_cols=82  Identities=17%  Similarity=0.172  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC--c-eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA--D-ETAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+ +++..  . ..+..+ ++..++.+.+.++.+. -+.
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA-FGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            467899998 69999998888888899 688887887665433 33331  1 111111 2222333333333322 246


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|++|.+.|.
T Consensus        83 id~li~~Ag~   92 (251)
T 1zk4_A           83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=95.89  E-value=0.044  Score=47.21  Aligned_cols=81  Identities=11%  Similarity=0.097  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH---HHcCCce-e--eecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA---RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~---~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +|.++||.| ++++|.+..+.+...|+ .|+.+++++++.+.+   .+.+... .  .|. ++..+..+.+.+..+.. +
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~v~~~~~~~-G   82 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVEL-QDDAQCRDAVAQTIATF-G   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCT-TCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeec-CCHHHHHHHHHHHHHHh-C
Confidence            478899998 68999998887778899 677777766544333   3344322 1  222 23334444444444332 4


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++++.|.
T Consensus        83 ~iDiLVNnAGi   93 (258)
T 4gkb_A           83 RLDGLVNNAGV   93 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=95.89  E-value=0.063  Score=46.08  Aligned_cols=81  Identities=22%  Similarity=0.285  Sum_probs=54.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.|....   .|. ++..+..+.+.+..+.. 
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~~~-   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADV-SKKKDVEEFVRRTFETY-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHHc-
Confidence            478899998 68999998888888899 788888988775433    34554322   222 23344444444444333 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        83 G~iDiLVNNAGi   94 (254)
T 4fn4_A           83 SRIDVLCNNAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            579999999873

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.88  E-value=0.029  Score=44.60  Aligned_cols=100  Identities=19%  Similarity=0.220  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH-hhCCCC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMGSGI  257 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  257 (366)
                      .++++++||-+|+|. |..+..+++..|. ..+++++.++ ..+.    .--..+.  .+..+.. ....+.. .....+
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~--~d~~~~~-~~~~~~~~~~~~~~   89 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQ--GDFRDEL-VMKALLERVGDSKV   89 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEE--SCTTSHH-HHHHHHHHHTTCCE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEE--cccccch-hhhhhhccCCCCce
Confidence            378899999999887 8888899988643 4899999887 3221    1111111  1212211 1111111 124679


Q ss_pred             cEEEEc-----CCC------------hHHHHHHHHhhcCCceEEEEcc
Q 017793          258 DVSFDC-----VGF------------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       258 d~vld~-----~g~------------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      |+|+..     .+.            ...+..+.+.|+++|.++....
T Consensus        90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            999983     222            2567778899999999987543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.87  E-value=0.042  Score=47.65  Aligned_cols=81  Identities=21%  Similarity=0.204  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+    ++.+... .  .|. ++..+..+.+.++.+. -
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-NDATAVDALVESTLKE-F  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-TCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-CCHHHHHHHHHHHHHH-c
Confidence            467899998 68999998888888899 788888887765433    2333221 1  222 2233344444444332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       104 g~iD~lvnnAg~  115 (270)
T 3ftp_A          104 GALNVLVNNAGI  115 (270)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.87  E-value=0.034  Score=47.92  Aligned_cols=83  Identities=16%  Similarity=0.224  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-H---HcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+ +   +.+... .+..+ ++..++.+.+.++.+..++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            467899998 69999998888888898 688887877655432 2   224322 11111 1222333333333332235


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=95.84  E-value=0.03  Score=52.53  Aligned_cols=99  Identities=21%  Similarity=0.261  Sum_probs=66.1

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ...++|++||=+|||+ |..++++|+.++ ...|++++.++++.+.+++    +|.. +.....   +..... .   ..
T Consensus        97 L~~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~---Da~~l~-~---~~  167 (464)
T 3m6w_A           97 LDPKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQA---PPRALA-E---AF  167 (464)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECS---CHHHHH-H---HH
T ss_pred             cCcCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEEC---CHHHhh-h---hc
Confidence            4578899998888766 667778887764 2489999999998877654    5765 333222   222211 1   12


Q ss_pred             CCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...||.|+-   |+|.                         ...+..+++.|++||+++..
T Consensus       168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvys  228 (464)
T 3m6w_A          168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYS  228 (464)
T ss_dssp             CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            567999984   4332                         23566788899999998863

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=95.84  E-value=0.047  Score=46.58  Aligned_cols=81  Identities=22%  Similarity=0.361  Sum_probs=53.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+. +++++....   .|. ++..+..+.+.++.+. -+++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~i   81 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADI-SDPGSVKALFAEIQAL-TGGI   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCT-TCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCC-CCHHHHHHHHHHHHHH-CCCC
Confidence            468899998 68999998888888999 78888888876654 445554322   121 2223333444444332 2479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        82 d~lv~nAg~   90 (247)
T 3rwb_A           82 DILVNNASI   90 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.84  E-value=0.069  Score=48.26  Aligned_cols=131  Identities=13%  Similarity=0.092  Sum_probs=80.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC--CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      -+|.|+|+|.+|...+..++..  +++.+.+++.++++.+ +++++|+ ..  +    .++.+.+.      ...+|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~--~----~~~~~ll~------~~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RG--H----ASLTDMLA------QTDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EE--E----SCHHHHHH------HCCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ce--e----CCHHHHhc------CCCCCEEE
Confidence            4789999999997766666655  6644556778887755 4566776 22  2    13333321      24799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCCceeec----hHhhhcCcEEE-Eee-ccCCChHHHHHHHHCCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL----TPAAAREVDVI-GIF-RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~----~~~~~~~~~~~-~~~-~~~~~~~~~~~~l~~g~~  329 (366)
                      .|+....+...+..++..|-. +++.-+........    ...-..+..+. +.. .+...++.+.+++++|.+
T Consensus        81 i~tp~~~h~~~~~~al~~gk~-v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEAGFH-VMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRF  153 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCE-EEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCCCC-EEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCC
Confidence            999988888888888887654 44543221111111    11122333333 222 235678889999999887

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.83  E-value=0.12  Score=45.82  Aligned_cols=87  Identities=10%  Similarity=0.080  Sum_probs=60.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      .+|.|+|+|.+|....+.+...|. .|++.++++++.+.+.+.|+...       .+..+.+        ...|+||-|+
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~--------~~aDvvi~~v   85 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVI--------KKCKYTIAML   85 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHH--------HhCCEEEEEc
Confidence            579999999999988888888898 78889999999888888775321       1222222        2368888888


Q ss_pred             CChHHHHHHH-------HhhcCCceEEEEc
Q 017793          265 GFDKTMSTAL-------NATRPGGKVCLIG  287 (366)
Q Consensus       265 g~~~~~~~~~-------~~l~~~G~~v~~g  287 (366)
                      +.+......+       ..+.++..++..+
T Consensus        86 p~~~~~~~v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           86 SDPCAALSVVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             SSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             CCHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence            7654444444       3345555555554

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.83  E-value=0.056  Score=46.92  Aligned_cols=97  Identities=11%  Similarity=0.106  Sum_probs=62.3

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +++...+..+.++||+|+|+.|.+++.-+...|+..|.++.++.+|.+ ++++++.+    +..   ..    .      
T Consensus       110 ~l~~~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~----~~~---~~----~------  172 (271)
T 1npy_A          110 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA----YIN---SL----E------  172 (271)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE----EES---CC----T------
T ss_pred             HHHHhCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc----cch---hh----h------
Confidence            444444456789999999999999888888899877888888877754 55666642    111   00    0      


Q ss_pred             CCCCcEEEEcCCChHHH-------HHHHHhhcCCceEEEEcc
Q 017793          254 GSGIDVSFDCVGFDKTM-------STALNATRPGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~~-------~~~~~~l~~~G~~v~~g~  288 (366)
                      ...+|+|++|++..-..       ......+.++..++.+-.
T Consensus       173 ~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          173 NQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             TCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             cccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            13699999998854210       011234556666665543

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.82  E-value=0.11  Score=45.19  Aligned_cols=90  Identities=20%  Similarity=0.155  Sum_probs=60.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCC-CCcEEEEc
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~  263 (366)
                      +|.|+|+|.+|...++.++..|.. .|++.++++++.+.++++|..... . .   +..+.        -. .+|+|+.|
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~-~-~---~~~~~--------~~~~aDvVila   69 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEG-T-T---SIAKV--------EDFSPDFVMLS   69 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEE-E-S---CGGGG--------GGTCCSEEEEC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccc-c-C---CHHHH--------hcCCCCEEEEc
Confidence            689999999999988888888852 588889999988888888863211 1 1   11111        13 68999999


Q ss_pred             CCChHHH---HHHHHhhcCCceEEEEcc
Q 017793          264 VGFDKTM---STALNATRPGGKVCLIGL  288 (366)
Q Consensus       264 ~g~~~~~---~~~~~~l~~~G~~v~~g~  288 (366)
                      +......   ......++++..++.++.
T Consensus        70 vp~~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           70 SPVRTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             CCHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            9865332   223345667766665543

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.82  E-value=0.0097  Score=52.77  Aligned_cols=99  Identities=14%  Similarity=0.166  Sum_probs=65.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--------CceeeecCCCCcchHHHHHHHHHh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--------ADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ...+.+||++|+|. |..+..+++..+..++++++.+++-.+.+++.-        .+.+....   .+..+.+..    
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~---~Da~~~l~~----  164 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEFMKQ----  164 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHT----
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHhh----
Confidence            45678999999775 777888888765568999999999888877631        11111111   232222221    


Q ss_pred             hCCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....||+|+.....          ...+..+.+.|+++|.++...
T Consensus       165 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          165 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            24679999843322          235778889999999998754

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.81  E-value=0.063  Score=47.70  Aligned_cols=89  Identities=19%  Similarity=0.201  Sum_probs=64.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|+ +|++.+++.++. .++++|+..    .    ++.+    +.    ...|+|+.
T Consensus       141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~----~----~l~e----ll----~~aDvVvl  202 (313)
T 2ekl_A          141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA----V----SLEE----LL----KNSDVISL  202 (313)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE----C----CHHH----HH----HHCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee----c----CHHH----HH----hhCCEEEE
Confidence            57899999999999999999999999 788998887764 456777542    1    2222    22    24799999


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEccc
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIGLA  289 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  289 (366)
                      +++...    .+ ...+..|++++.++.++..
T Consensus       203 ~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          203 HVTVSKDAKPIIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             CCCCCTTSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred             eccCChHHHHhhCHHHHhcCCCCCEEEECCCC
Confidence            887432    12 3566789999888877653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.81  E-value=0.054  Score=46.71  Aligned_cols=81  Identities=14%  Similarity=0.236  Sum_probs=48.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh---hHHH-HHHH---cCCcee---eecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV---QRLS-IARN---LGADET---AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~---lg~~~~---~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+.++.   ++.+ ..++   .+....   .|. ++..+..+.+.++.+
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL-SNEEEVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCC-CSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHH
Confidence            467899998 68999998888888899 666665443   2322 2222   233221   122 222334444444433


Q ss_pred             hhCCCCcEEEEcCCC
Q 017793          252 AMGSGIDVSFDCVGF  266 (366)
Q Consensus       252 ~~~~~~d~vld~~g~  266 (366)
                      .. +++|+++++.|.
T Consensus        88 ~~-g~iD~lvnnAg~  101 (262)
T 3ksu_A           88 EF-GKVDIAINTVGK  101 (262)
T ss_dssp             HH-CSEEEEEECCCC
T ss_pred             Hc-CCCCEEEECCCC
Confidence            22 479999999883

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=95.80  E-value=0.044  Score=47.74  Aligned_cols=82  Identities=20%  Similarity=0.271  Sum_probs=51.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc--eeeecC---CCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD--ETAKVS---TDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~--~~~~~~---~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+    ++.+..  .+..+.   ++..+..+.+.++.+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            467899998 69999998888888899 688888887765432    223321  221111   2223334444444332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+++|+++++.|.
T Consensus        89 -~g~id~lv~nAg~  101 (281)
T 3svt_A           89 -HGRLHGVVHCAGG  101 (281)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -cCCCCEEEECCCc
Confidence             2479999999985

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.80  E-value=0.15  Score=39.77  Aligned_cols=94  Identities=15%  Similarity=0.133  Sum_probs=57.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC-hhHHHHHHH-c--CCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD-VQRLSIARN-L--GADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~~~~-l--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ..+++|.|+|.+|...++.+...|. .|++++.+ +++.+.+++ +  |.. ++.-  +..+ ...+++   ..-.++|.
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~g--d~~~-~~~l~~---a~i~~ad~   74 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPG--DSND-SSVLKK---AGIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEES--CTTS-HHHHHH---HTTTTCSE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEc--CCCC-HHHHHH---cChhhCCE
Confidence            4679999999999999999988898 68888786 465554443 2  332 2221  1111 122222   23467999


Q ss_pred             EEEcCCChHHHH---HHHHhhcCCceEEE
Q 017793          260 SFDCVGFDKTMS---TALNATRPGGKVCL  285 (366)
Q Consensus       260 vld~~g~~~~~~---~~~~~l~~~G~~v~  285 (366)
                      |+-+++....-.   ...+.+.+..+++.
T Consensus        75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~  103 (153)
T 1id1_A           75 ILALSDNDADNAFVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred             EEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence            999998763221   22334445556554

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=95.78  E-value=0.052  Score=47.06  Aligned_cols=81  Identities=21%  Similarity=0.306  Sum_probs=52.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+ ..++++....   .|. ++..+..+.+.++.+.. +++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDL-TNEVSVRALIDFTIDTF-GRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCC-CCHHHHHHHHHHHHHHc-CCC
Confidence            467899998 68999998888888899 6777877776654 4445553321   222 22233444444443322 479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        87 d~lv~nAg~   95 (271)
T 3tzq_B           87 DIVDNNAAH   95 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.78  E-value=0.046  Score=47.27  Aligned_cols=88  Identities=13%  Similarity=0.137  Sum_probs=59.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +.+++|+|+|++|.+++..+...| ..|.++.++.++.+.+.+++... ..+.    +       +    . .+|+|++|
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~~~-~~~~----~-------l----~-~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGCDC-FMEP----P-------K----S-AFDLIINA  179 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTCEE-ESSC----C-------S----S-CCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCCeE-ecHH----H-------h----c-cCCEEEEc
Confidence            889999999999999999999899 47888888888776544777432 2221    1       1    1 68999998


Q ss_pred             CCChH-----H-HHHHHHhhcCCceEEEEccc
Q 017793          264 VGFDK-----T-MSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       264 ~g~~~-----~-~~~~~~~l~~~G~~v~~g~~  289 (366)
                      ++..-     . .......++++..++.+...
T Consensus       180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~  211 (269)
T 3phh_A          180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAYG  211 (269)
T ss_dssp             CTTCCCCSCSSCHHHHHHHHHHCSEEEESCCS
T ss_pred             ccCCCCCCCCCChHHHHhhCCCCCEEEEeCCC
Confidence            76431     1 11122356777777766543

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.77  E-value=0.035  Score=49.52  Aligned_cols=98  Identities=16%  Similarity=0.166  Sum_probs=65.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .++.+||++|+|. |..+..+++..+..++++++.+++-.+.+++.-.        +.+....   .|..+.+..    .
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~---~D~~~~l~~----~  186 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI---EDASKFLEN----V  186 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE---SCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE---ccHHHHHhh----c
Confidence            4568999999776 6777888887655589999999999888876421        1111111   233332221    2


Q ss_pred             CCCCcEEEEcCC----------ChHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...||+|+-...          +...+..+.+.|+++|.++...
T Consensus       187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            467999984331          1356788889999999998753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=95.77  E-value=0.087  Score=45.27  Aligned_cols=81  Identities=17%  Similarity=0.305  Sum_probs=49.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHHHH----HHcCCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+ ++++++.+.+    ++.+... .  .|. ++..+..+.+.++.+..
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADL-TNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHHHHHh
Confidence            467899998 68999998888888899 55555 6665543322    2334321 1  122 22233444444443322


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +++|+++.+.|.
T Consensus        85 -g~id~lv~nAg~   96 (259)
T 3edm_A           85 -GEIHGLVHVAGG   96 (259)
T ss_dssp             -CSEEEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=95.77  E-value=0.059  Score=46.39  Aligned_cols=81  Identities=19%  Similarity=0.237  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-ee--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ET--AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++... ..  .|. ++..++.+.+.++.+.. +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~-g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDV-TQPAQWKAAVDTAVTAF-GGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecC-CCHHHHHHHHHHHHHHc-CCC
Confidence            467899998 69999998888888899 688888887765543 334321 11  122 22233334444333322 479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        83 D~lv~~Ag~   91 (260)
T 1nff_A           83 HVLVNNAGI   91 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.77  E-value=0.035  Score=48.34  Aligned_cols=81  Identities=27%  Similarity=0.352  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CC---c-ee--eecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GA---D-ET--AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~---~-~~--~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +.   . ..  .|. ++..++.+.+.++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV-TTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecC-CCHHHHHHHHHHHHH
Confidence            367899998 68999998888888899 688888887765433 222   32   1 11  122 222333333443333


Q ss_pred             hhCCCCcEEEEcCCC
Q 017793          252 AMGSGIDVSFDCVGF  266 (366)
Q Consensus       252 ~~~~~~d~vld~~g~  266 (366)
                      .. +++|+++++.|.
T Consensus        83 ~~-g~iD~lv~nAg~   96 (280)
T 1xkq_A           83 QF-GKIDVLVNNAGA   96 (280)
T ss_dssp             HH-SCCCEEEECCCC
T ss_pred             hc-CCCCEEEECCCC
Confidence            22 479999999873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=95.77  E-value=0.075  Score=46.02  Aligned_cols=82  Identities=23%  Similarity=0.206  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++.....+..+ ++.+++.+.+.++.+. -+++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR-FGRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            467899998 69999998888888899 688888887766544 334322222111 2223333334333332 247999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++++.|.
T Consensus        86 lv~nAg~   92 (270)
T 1yde_A           86 VVNNAGH   92 (270)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=95.77  E-value=0.049  Score=46.76  Aligned_cols=81  Identities=23%  Similarity=0.293  Sum_probs=52.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---CCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL---GADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+. ++   +... .  .|. ++..+..+.+.++.+. -
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~   81 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-RNTDDIQKMIEQIDEK-F   81 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-TCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHH-c
Confidence            467899998 68999998888888899 6888888887765443 33   2221 1  122 2223344444444332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        82 g~id~lv~nAg~   93 (257)
T 3imf_A           82 GRIDILINNAAG   93 (257)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999883

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=95.76  E-value=0.055  Score=47.12  Aligned_cols=81  Identities=22%  Similarity=0.287  Sum_probs=50.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+....   .|. ++..+..+.+.++.+.. 
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~-   99 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-TSTDEVHAAVAAAVERF-   99 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-TCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHHHc-
Confidence            568899998 68999998888888899 688888887765433 22   343321   122 22233334444443322 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999874

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.76  E-value=0.049  Score=48.78  Aligned_cols=132  Identities=15%  Similarity=0.053  Sum_probs=80.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      -+|.|+|+|.+|...+..++.. +++.+.+.++++++.+ +++++|....  +    .++.+    +.+  ...+|+|+.
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~--~----~~~~~----ll~--~~~~D~V~i   73 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVA--Y----GSYEE----LCK--DETIDIIYI   73 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCC--B----SSHHH----HHH--CTTCSEEEE
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCce--e----CCHHH----Hhc--CCCCCEEEE
Confidence            3789999999998777666664 5643445677777654 5566776432  1    23322    322  357999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      |+....+...+..+|..|-.+ ++.-+.........    ..-..++.+.-..  .+...++.+.+++++|.+
T Consensus        74 ~tp~~~h~~~~~~al~~gk~v-l~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           74 PTYNQGHYSAAKLALSQGKPV-LLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGL  145 (330)
T ss_dssp             CCCGGGHHHHHHHHHHTTCCE-EECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTT
T ss_pred             cCCCHHHHHHHHHHHHCCCeE-EEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCC
Confidence            999888888888888877554 44332111111111    1122333333222  235678889999999887

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=95.76  E-value=0.06  Score=45.74  Aligned_cols=82  Identities=12%  Similarity=0.200  Sum_probs=51.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc--eeeecCC---CCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD--ETAKVST---DIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~--~~~~~~~---~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+    ++.+..  .++..+-   +..++.+.+.++.+.
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            467899998 69999998888888899 688888888765543    233322  2222221   222333333333332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                      . +++|+++.+.|.
T Consensus        92 ~-g~id~lv~nAg~  104 (247)
T 3i1j_A           92 F-GRLDGLLHNASI  104 (247)
T ss_dssp             H-SCCSEEEECCCC
T ss_pred             C-CCCCEEEECCcc
Confidence            2 479999999874

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=95.75  E-value=0.049  Score=50.75  Aligned_cols=101  Identities=17%  Similarity=0.176  Sum_probs=67.2

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ....+++++||-.|||+ |..+.++++..+-..|++++.++++.+.+++    +|....+ ...+..++..   .+   .
T Consensus       241 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~-~~~D~~~~~~---~~---~  312 (429)
T 1sqg_A          241 WLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV-KQGDGRYPSQ---WC---G  312 (429)
T ss_dssp             HHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEE-EECCTTCTHH---HH---T
T ss_pred             HcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEE-EeCchhhchh---hc---c
Confidence            34578999999999877 7788888887753489999999998877654    4543211 1122222221   11   1


Q ss_pred             CCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      +..||.|+-   |.|..                         ..+..+++.|++||+++..
T Consensus       313 ~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvys  373 (429)
T 1sqg_A          313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  373 (429)
T ss_dssp             TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            357999985   44421                         3467788889999998865

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.75  E-value=0.056  Score=49.40  Aligned_cols=132  Identities=14%  Similarity=0.084  Sum_probs=78.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--------CCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          185 TNVMIMGSGPIGLVTLLAARA--------FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~--------~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      =+|.|+|+|.+|..-+...+.        -+++.+.+++.++++.+ +++++|......      ++.+    +.+  ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~------d~~e----ll~--~~   93 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA------DWRA----LIA--DP   93 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES------CHHH----HHH--CT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC------CHHH----Hhc--CC
Confidence            579999999999753332221        24544556677776654 667788765432      3333    332  45


Q ss_pred             CCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       256 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      .+|+|+-|+....+.+.+..+|..| +=+++.-+.........    ..-..++.+.-.+  .+...++.+.+++++|.+
T Consensus        94 ~iDaV~IatP~~~H~~~a~~al~aG-khVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~i  172 (393)
T 4fb5_A           94 EVDVVSVTTPNQFHAEMAIAALEAG-KHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVI  172 (393)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCcEEEECCChHHHHHHHHHHHhcC-CeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCC
Confidence            7999999999888888898888765 44556433221111111    1222333333222  235678889999999887

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=95.74  E-value=0.056  Score=47.59  Aligned_cols=81  Identities=17%  Similarity=0.212  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc---CCcee----eecCCCC-cchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADET----AKVSTDI-EDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~~----~~~~~~~-~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. ++++   +...+    .|. ++. .........+.+.
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDV-TDPIATMSSLADFIKTH   88 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCT-TSCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccC-CCcHHHHHHHHHHHHHh
Confidence            467899998 68999998888888899 78888888776432 2332   32222    122 111 2223333333322


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       .+++|+++.+.|.
T Consensus        89 -~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 -FGKLDILVNNAGV  101 (311)
T ss_dssp             -HSSCCEEEECCCC
T ss_pred             -CCCCCEEEECCcc
Confidence             2479999999985

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.74  E-value=0.07  Score=47.16  Aligned_cols=100  Identities=18%  Similarity=0.129  Sum_probs=66.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--------CceeeecCCCCcchHHHHHHHHHh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--------ADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+++.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.-        ...+....   .+..+.+..   .
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~~~~---~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV---GDGLAFVRQ---T  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHS---S
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHHh---c
Confidence            46778999999876 777888888655568999999998888877632        11111111   233222211   0


Q ss_pred             hCCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....||+|+.....          .+.+..+.+.|+++|.++...
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            24679999864321          346778889999999998764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=95.74  E-value=0.04  Score=49.12  Aligned_cols=81  Identities=12%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC--ce-e--eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGA--DE-T--AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~--~~-~--~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+.    ..+.  .. .  .|+ ++...+.+.+.++.+.
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-ASREGFKMAADEVEAR   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-CCHHHHHHHHHHHHHh
Confidence            467899998 68999988888888899 6888888887654332    2232  11 1  122 2233444444444332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+++|+++.+.|.
T Consensus        85 -~g~id~lv~nAg~   97 (319)
T 3ioy_A           85 -FGPVSILCNNAGV   97 (319)
T ss_dssp             -TCCEEEEEECCCC
T ss_pred             -CCCCCEEEECCCc
Confidence             3579999999983

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.74  E-value=0.052  Score=48.90  Aligned_cols=131  Identities=16%  Similarity=0.124  Sum_probs=79.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      -+|.|+|+|.+|...+..++.. +++.+.++++++++.+ +++++|.. .  +    .++.    ++.+  ...+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~--~----~~~~----~~l~--~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-A--V----ASPD----EVFA--RDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-E--E----SSHH----HHTT--CSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-e--e----CCHH----HHhc--CCCCCEEEE
Confidence            3789999999998777766655 6644556777877755 45667732 2  2    1222    2221  347999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEe--eccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGI--FRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  329 (366)
                      |+....+...+..++..|-.+ ++..+.........    ..-..++.+.-.  ..+...++.+.+++++|.+
T Consensus        72 ~tp~~~h~~~~~~al~~gk~v-~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           72 GSPTSTHVDLITRAVERGIPA-LCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             CSCGGGHHHHHHHHHHTTCCE-EECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchhhHHHHHHHHHcCCcE-EEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCC
Confidence            999888888888888877554 44322111111111    111222322222  2235678889999999887

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.72  E-value=0.026  Score=47.96  Aligned_cols=82  Identities=22%  Similarity=0.299  Sum_probs=51.5

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCC--CCeEEEEcCChhHHHHHHHc-CCce-eeecC-CCCcchHHHHHHHHHhhC-CC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARNL-GADE-TAKVS-TDIEDVDTDVGKIQNAMG-SG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~l-g~~~-~~~~~-~~~~~~~~~~~~~~~~~~-~~  256 (366)
                      +.++||.| +|.+|...++.+...|  . .|++++++.++.+.++++ +... .+..+ ++...+.+.+.++.+..+ .+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            56899998 6999999888888888  6 788888888776666655 2221 11111 122233333333332222 27


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|++|.+.|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999998863

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=95.72  E-value=0.056  Score=44.92  Aligned_cols=95  Identities=20%  Similarity=0.212  Sum_probs=63.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+++.+||-+|||. |..+..+++. +. .+++++.+++..+.+++.-.+.+.....+..++.         ....+|+|
T Consensus        43 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~---------~~~~fD~v  110 (220)
T 3hnr_A           43 NKSFGNVLEFGVGT-GNLTNKLLLA-GR-TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE---------VPTSIDTI  110 (220)
T ss_dssp             HTCCSEEEEECCTT-SHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC---------CCSCCSEE
T ss_pred             ccCCCeEEEeCCCC-CHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC---------CCCCeEEE
Confidence            35788999999876 7778888876 76 8999999999888887653211111111111110         12579999


Q ss_pred             EEcCCC-----h---HHHHHHHHhhcCCceEEEEc
Q 017793          261 FDCVGF-----D---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       261 ld~~g~-----~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +....-     .   ..+..+.+.|+++|.++...
T Consensus       111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            875321     1   16778889999999988763

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.72  E-value=0.053  Score=46.72  Aligned_cols=82  Identities=21%  Similarity=0.290  Sum_probs=51.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-H---HcCCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADETAKVS---TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+ +   +.+...+..+.   ++..+..+.+.++.+. -
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE-F   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence            467899998 69999998888888899 788888888765433 2   23322222111   2223333334443332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        87 g~id~lvnnAg~   98 (262)
T 3pk0_A           87 GGIDVVCANAGV   98 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=95.72  E-value=0.076  Score=46.10  Aligned_cols=81  Identities=15%  Similarity=0.224  Sum_probs=48.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++++..+.++++   +... .+..+ ++..+..+....+.+  .++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA--TRR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH--HSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh--cCC
Confidence            478899998 68999998888888899 677777665544444443   3221 11111 122222222222222  257


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus       107 iD~lv~nAg~  116 (273)
T 3uf0_A          107 VDVLVNNAGI  116 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999874

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.71  E-value=0.081  Score=45.36  Aligned_cols=82  Identities=18%  Similarity=0.283  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC---------c--eeeecC-CCCcchHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA---------D--ETAKVS-TDIEDVDTDVGK  248 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~---------~--~~~~~~-~~~~~~~~~~~~  248 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+ +++..         .  ..+..+ ++...+.+.+++
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            367899998 69999998888888898 688888887765543 22311         1  111111 222233333444


Q ss_pred             HHHhhCCCC-cEEEEcCCC
Q 017793          249 IQNAMGSGI-DVSFDCVGF  266 (366)
Q Consensus       249 ~~~~~~~~~-d~vld~~g~  266 (366)
                      +.+.. +++ |+++.+.|.
T Consensus        85 ~~~~~-g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           85 VQACF-SRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHH-SSCCSEEEECCCC
T ss_pred             HHHHh-CCCCeEEEECCCc
Confidence            33322 356 999999873

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.71  E-value=0.054  Score=47.04  Aligned_cols=91  Identities=14%  Similarity=0.246  Sum_probs=58.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCC--ceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.+++|+|+|++|.+++..+...|+..|.++.++.++.+ ++++++.  -....+    .+       +.   ...+|+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~----~~-------l~---~~~~Di  184 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRY----EA-------LE---GQSFDI  184 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECS----GG-------GT---TCCCSE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeH----HH-------hc---ccCCCE
Confidence            5789999999999999988888899878888888888765 4455553  111111    11       11   157999


Q ss_pred             EEEcCCChHHH---HHHHHhhcCCceEEEEc
Q 017793          260 SFDCVGFDKTM---STALNATRPGGKVCLIG  287 (366)
Q Consensus       260 vld~~g~~~~~---~~~~~~l~~~G~~v~~g  287 (366)
                      |++|++..-.-   ....+.++++..++.+-
T Consensus       185 vInaTp~gm~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          185 VVNATSASLTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             EEECSSGGGGTCCCCCCGGGGTTCSEEEESS
T ss_pred             EEECCCCCCCCCCCCCCHHHhCcCCEEEEee
Confidence            99998753110   01123456666555553

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=95.70  E-value=0.076  Score=46.37  Aligned_cols=82  Identities=18%  Similarity=0.224  Sum_probs=52.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +... .+..+ ++..+..+.+.++.+. -+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK-FG  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            467899998 68999998888888899 788888887765533 333   2221 11111 2223344444444332 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=95.68  E-value=0.064  Score=46.59  Aligned_cols=82  Identities=20%  Similarity=0.301  Sum_probs=50.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCC-ceeeecC---CCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGA-DETAKVS---TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~-~~~~~~~---~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+++++++++.+.+    ++.+. ..+..+.   ++..++.+.+.++.+. 
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ-  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            367899998 69999998888888898 688888887665433    22332 1221111   2222333333333322 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|++|.+.|.
T Consensus       109 ~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          109 HSGVDICINNAGL  121 (279)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999873

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=95.68  E-value=0.047  Score=46.88  Aligned_cols=82  Identities=18%  Similarity=0.240  Sum_probs=53.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee-eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++++.... +..+ ++..+..+.+.++.+.. +++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKF-GKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            367899998 68999998888888899 688888888776544 44554321 1111 22233444444443322 4799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        86 ~li~~Ag~   93 (261)
T 3n74_A           86 ILVNNAGI   93 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46

Probab=95.68  E-value=0.036  Score=44.45  Aligned_cols=98  Identities=12%  Similarity=0.110  Sum_probs=62.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHHhhCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ..++.+||-+|+|. |..++.+++. +...+++++.+++..+.+++    .+.. .+....   .++.+.+..    ...
T Consensus        29 ~~~~~~vLDlGcG~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~----~~~   99 (177)
T 2esr_A           29 YFNGGRVLDLFAGS-GGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAERAIDC----LTG   99 (177)
T ss_dssp             CCCSCEEEEETCTT-CHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHHHHHHH----BCS
T ss_pred             hcCCCeEEEeCCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE---CcHHHhHHh----hcC
Confidence            56789999999875 7777777776 65589999999988777765    3332 121111   233332221    245


Q ss_pred             CCcEEEEcCCC-----hHHHHHHH--HhhcCCceEEEEc
Q 017793          256 GIDVSFDCVGF-----DKTMSTAL--NATRPGGKVCLIG  287 (366)
Q Consensus       256 ~~d~vld~~g~-----~~~~~~~~--~~l~~~G~~v~~g  287 (366)
                      .+|+|+-...-     ...+....  +.|+++|.++..-
T Consensus       100 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~  138 (177)
T 2esr_A          100 RFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCET  138 (177)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred             CCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence            69999875332     12333444  6789999988754

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=95.68  E-value=0.073  Score=45.41  Aligned_cols=82  Identities=18%  Similarity=0.286  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-H---cCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+. +   .+... .+..+ ++..+..+.+.++.+.. +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-G   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            467899998 69999998888888899 6888888887655432 2   23321 11111 22233333344333322 4


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.68  E-value=0.04  Score=48.56  Aligned_cols=81  Identities=25%  Similarity=0.316  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCC---ce-e--eecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGA---DE-T--AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~---~~-~--~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.   .. .  .|. ++..++.+.+.++.+
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV-TEASGQDDIINTTLA  102 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCC-CCHHHHHHHHHHHHH
Confidence            467899998 69999998888888899 688888887765433 22   232   11 1  122 222333334443333


Q ss_pred             hhCCCCcEEEEcCCC
Q 017793          252 AMGSGIDVSFDCVGF  266 (366)
Q Consensus       252 ~~~~~~d~vld~~g~  266 (366)
                      .. +++|+++++.|.
T Consensus       103 ~~-g~iD~lvnnAG~  116 (297)
T 1xhl_A          103 KF-GKIDILVNNAGA  116 (297)
T ss_dssp             HH-SCCCEEEECCCC
T ss_pred             hc-CCCCEEEECCCc
Confidence            22 479999999873

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.67  E-value=0.066  Score=46.36  Aligned_cols=82  Identities=26%  Similarity=0.384  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCc-e--eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD-E--TAKVS-TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~--~~~~~-~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.+++++++.+ ..++++.. .  .+..+ ++..++.+.+.++.+. -++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK-HGK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            467899998 69999998888888898 6777878776544 33444321 1  11111 2222333333333322 247


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++.+.|.
T Consensus        93 id~li~~Ag~  102 (278)
T 2bgk_A           93 LDIMFGNVGV  102 (278)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=95.65  E-value=0.095  Score=45.53  Aligned_cols=82  Identities=17%  Similarity=0.228  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCc-eeeecC---CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGAD-ETAKVS---TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. ++++... .+..+.   ++.+++.+.+.++.+ .-++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGE-LSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHH-HCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHH-hcCC
Confidence            367899998 68999998888888898 68888888776543 3333210 221111   122233333333332 2357


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++++.|.
T Consensus       106 iD~lvnnAg~  115 (276)
T 2b4q_A          106 LDILVNNAGT  115 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=95.64  E-value=0.095  Score=44.62  Aligned_cols=82  Identities=28%  Similarity=0.351  Sum_probs=51.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .+..+ ++..++.+.+.++.+. -+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA-LG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            367899998 69999998888888899 688888887765433 22   24322 11111 2223333334333322 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++++.|.
T Consensus        84 ~id~lv~nAg~   94 (247)
T 2jah_A           84 GLDILVNNAGI   94 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.64  E-value=0.071  Score=45.89  Aligned_cols=81  Identities=27%  Similarity=0.424  Sum_probs=50.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +... .  .|. ++..++...+.++.+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~-   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDV-TSEEAVIGTVDSVVRDF-   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCT-TCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHHHh-
Confidence            467899998 68999998888888899 677887887665433 222   4322 1  122 22233333333333322 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        83 g~id~lv~nAg~   94 (262)
T 1zem_A           83 GKIDFLFNNAGY   94 (262)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.64  E-value=0.066  Score=45.78  Aligned_cols=98  Identities=19%  Similarity=0.222  Sum_probs=61.7

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +.++||.| +|++|.+.++.+...|+ .|+++++++++.+.     ....++ .++..+..+.+.++.+ ..+++|+++.
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d-~~d~~~v~~~~~~~~~-~~g~iD~li~   93 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIK-DSGEEEIKSVIEKINS-KSIKVDTFVC   93 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECS-CSSHHHHHHHHHHHHT-TTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEE-eCCHHHHHHHHHHHHH-HcCCCCEEEE
Confidence            57899998 68999998888888899 68888777654321     111122 2333344444444433 2357999999


Q ss_pred             cCCCh-----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          263 CVGFD-----------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       263 ~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      +.|..           +               ..+.+...+.++|+++.++..
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS  146 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence            98831           0               223344556677899988743

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=95.64  E-value=0.051  Score=46.65  Aligned_cols=81  Identities=20%  Similarity=0.207  Sum_probs=46.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+ ..++++... .  .|. ++..+..+.+.++.+. -+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~i   82 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADV-TNEADATAALAFAKQE-FGHV   82 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCT-TCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccC-CCHHHHHHHHHHHHHH-cCCC
Confidence            467899998 68999998888888899 6777777766544 334444321 1  122 2223344444444332 2479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        83 d~lv~nAg~   91 (257)
T 3tpc_A           83 HGLVNCAGT   91 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=95.62  E-value=0.087  Score=44.59  Aligned_cols=79  Identities=22%  Similarity=0.231  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ++.++||.| +|.+|.+.++.+...|+ .|+.+++++++.+.+ +++.....+..  +-.+. +.++++.+ .-+++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~--D~~~~-~~~~~~~~-~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCV--DLGDW-EATERALG-SVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEEC--CTTCH-HHHHHHHT-TCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEE--eCCCH-HHHHHHHH-HcCCCCEE
Confidence            467899998 69999999988888899 688888887766543 33432222221  11222 22333332 12469999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      |++.|.
T Consensus        81 i~~Ag~   86 (244)
T 3d3w_A           81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.62  E-value=0.064  Score=49.62  Aligned_cols=132  Identities=19%  Similarity=0.137  Sum_probs=81.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC---------CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF---------GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~---------g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      =+|.|+|+|.+|..-+...+..         +++.+.+++.++++.+ +++++|...+..      ++.+    +.+  .
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~------d~~~----ll~--~   94 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG------DWRE----LVN--D   94 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES------SHHH----HHH--C
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC------CHHH----Hhc--C
Confidence            4689999999997655544432         3444556677777655 667788765432      3333    332  4


Q ss_pred             CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEE-Ee-eccCCChHHHHHHHHCCC
Q 017793          255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVI-GI-FRYRSTWPLCIEFLRSGK  328 (366)
Q Consensus       255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~g~  328 (366)
                      ..+|+|+-|.....+...+..+|..|=. +++.-+.........    ..-..++.+. +. ..+...++.+.+++++|.
T Consensus        95 ~~vD~V~I~tp~~~H~~~~~~al~aGkh-Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~  173 (412)
T 4gqa_A           95 PQVDVVDITSPNHLHYTMAMAAIAAGKH-VYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIARGD  173 (412)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHHTTCE-EEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHHcCCC-eEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHHhcCC
Confidence            5799999999988889999888887654 445432211111111    1112233332 22 233667888999999988


Q ss_pred             C
Q 017793          329 I  329 (366)
Q Consensus       329 ~  329 (366)
                      +
T Consensus       174 i  174 (412)
T 4gqa_A          174 I  174 (412)
T ss_dssp             T
T ss_pred             c
Confidence            7

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=95.62  E-value=0.12  Score=44.86  Aligned_cols=81  Identities=16%  Similarity=0.268  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+++++++++.+.+ ++   .+... .  .|. ++.+++.+.+.++.+. -
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDV-RSVPEIEALVAAVVER-Y   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-CCHHHHHHHHHHHHHH-h
Confidence            367899998 69999998888888899 688888887765432 22   24332 1  122 2223333334443332 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        98 g~iD~lv~~Ag~  109 (277)
T 2rhc_B           98 GPVDVLVNNAGR  109 (277)
T ss_dssp             CSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=95.61  E-value=0.054  Score=46.82  Aligned_cols=81  Identities=23%  Similarity=0.271  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-H---HcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+ +   +.+....   .|. ++..+..+.+.++.+. -
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDV-TDRHSVAAFAQAAVDT-W   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHH-c
Confidence            357899998 68999998888888899 688888887765433 2   2343221   222 2223344444444332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        80 g~iD~lVnnAG~   91 (264)
T 3tfo_A           80 GRIDVLVNNAGV   91 (264)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.61  E-value=0.084  Score=48.74  Aligned_cols=96  Identities=11%  Similarity=0.110  Sum_probs=59.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCC--CeEEEEcCChhHHHHH-HHcCC-----ceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGA--PRIIITDVDVQRLSIA-RNLGA-----DETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~--~~vv~v~~~~~~~~~~-~~lg~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +|+|+|+|.+|...++.+...|.  ..|++++++.++.+.+ ++++.     -..+..+-  .+ .+.+.++.+  ..++
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~--~d-~~~l~~~l~--~~~~   77 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDA--DS-IEELVALIN--EVKP   77 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCT--TC-HHHHHHHHH--HHCC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecC--CC-HHHHHHHHH--hhCC
Confidence            79999999999998888877773  3788888888876543 33431     11111111  11 122333322  1158


Q ss_pred             cEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          258 DVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+|++|.+..........++..+-.++.+
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             CEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            99999998655555555667777677654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=95.61  E-value=0.051  Score=47.39  Aligned_cols=81  Identities=21%  Similarity=0.279  Sum_probs=53.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|. ++..+..+.+.++.+.. +++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~i   80 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDV-RSLQDQKRAAERCLAAF-GKI   80 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCC-CCHHHHHHHHHHHHHhc-CCC
Confidence            367899998 68999998888888899 788888888776544 34443321   122 22233344444443322 479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        81 D~lvnnAg~   89 (281)
T 3zv4_A           81 DTLIPNAGI   89 (281)
T ss_dssp             CEEECCCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.61  E-value=0.066  Score=46.91  Aligned_cols=36  Identities=28%  Similarity=0.382  Sum_probs=31.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ...+|||+|+|++|..+++.+.+.|+.++..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            457899999999999999988889998899988655

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.61  E-value=0.11  Score=44.82  Aligned_cols=81  Identities=21%  Similarity=0.246  Sum_probs=52.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TA--KVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+.    +.+... .+  |. ++..+..+.+.++.+. -
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~   86 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDI-TDDAQVAHLVDETMKA-Y   86 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-T
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHH-c
Confidence            578899998 68999998888888899 6888888877654332    234322 11  22 2223344444444332 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            579999999865

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=95.60  E-value=0.09  Score=44.65  Aligned_cols=82  Identities=21%  Similarity=0.266  Sum_probs=51.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|++|...++.+...|+ +|+.+++++++.+.+    ++.+... .+..+ ++..+..+.+.++.+ ..+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA-ENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-HcC
Confidence            367899998 69999998888888899 688888887765433    2334332 11111 222333444444433 245


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.60  E-value=0.047  Score=47.70  Aligned_cols=79  Identities=20%  Similarity=0.265  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS---TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+    ++.+...+..+.   ++.....+.+.++.+. .
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL-M  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH-c
Confidence            367899998 69999998888888898 688888887765543    233443322111   1222333333333322 2


Q ss_pred             CCCcEEEEc
Q 017793          255 SGIDVSFDC  263 (366)
Q Consensus       255 ~~~d~vld~  263 (366)
                      +++|+++.+
T Consensus       105 g~iD~li~n  113 (286)
T 1xu9_A          105 GGLDMLILN  113 (286)
T ss_dssp             TSCSEEEEC
T ss_pred             CCCCEEEEC
Confidence            479999998

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.60  E-value=0.15  Score=45.84  Aligned_cols=131  Identities=17%  Similarity=0.258  Sum_probs=79.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +|.|+|+|.+|...+..++.. +++.+.+++.++++.+ ++++++......      ++.+    +.+  ...+|+|+.|
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~------~~~~----ll~--~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK------DPHE----LIE--DPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES------SHHH----HHH--CTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC------CHHH----Hhc--CCCCCEEEEc
Confidence            688999999998766555544 5644446678877755 556677654321      3322    222  3579999999


Q ss_pred             CCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEe--eccCCChHHHHHHHHCCCC
Q 017793          264 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGI--FRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       264 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  329 (366)
                      ++...+...+..++..|-.+ ++.-+.........    ..-..++.+.-.  ..+...++.+.+++++|.+
T Consensus        72 tp~~~h~~~~~~al~~gk~v-~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAKKHV-FCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI  142 (344)
T ss_dssp             SCGGGHHHHHHHHHHTTCEE-EEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCCcchHHHHHHHHhcCCeE-EEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence            99888888888888776554 44322111111111    111223333222  2336678889999999887

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=95.59  E-value=0.097  Score=45.13  Aligned_cols=80  Identities=28%  Similarity=0.353  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc-----CCce-e--eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GADE-T--AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~~-~--~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++     +... .  .|. ++.+++.+.+.++.+.
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-SDEAQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-CCHHHHHHHHHHHHHH
Confidence            467899998 69999998888888899 688888887765433 222     3322 1  122 2223344444443332


Q ss_pred             hCCCCcEEEEcCC
Q 017793          253 MGSGIDVSFDCVG  265 (366)
Q Consensus       253 ~~~~~d~vld~~g  265 (366)
                       -+++|+++++.|
T Consensus        90 -~g~id~lv~nAg  101 (267)
T 1iy8_A           90 -FGRIDGFFNNAG  101 (267)
T ss_dssp             -HSCCSEEEECCC
T ss_pred             -cCCCCEEEECCC
Confidence             247999999987

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=95.58  E-value=0.065  Score=46.49  Aligned_cols=81  Identities=20%  Similarity=0.269  Sum_probs=52.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCce-ee--ecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TA--KVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. +++++... .+  |. ++..+..+.+.++.+. -+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g~i  103 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDV-TDPDSVRALFTATVEK-FGRV  103 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCT-TSHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecC-CCHHHHHHHHHHHHHH-cCCC
Confidence            467889998 68999998888888899 68888888776553 44554321 11  22 2223344444444332 2479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus       104 D~lVnnAg~  112 (272)
T 4dyv_A          104 DVLFNNAGT  112 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=95.58  E-value=0.022  Score=48.20  Aligned_cols=96  Identities=15%  Similarity=0.259  Sum_probs=65.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ++++.+||-+|+|. |..+..+++. |. .+++++.+++..+.+++.... .+.....+..++.        .....+|+
T Consensus        51 ~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~--------~~~~~fD~  119 (242)
T 3l8d_A           51 VKKEAEVLDVGCGD-GYGTYKLSRT-GY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP--------FENEQFEA  119 (242)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS--------SCTTCEEE
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC--------CCCCCccE
Confidence            56889999999876 7788888886 77 899999999999888875321 1111111111110        01457999


Q ss_pred             EEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793          260 SFDCVGF------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       260 vld~~g~------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      |+....-      ...+..+.+.|+++|.++...
T Consensus       120 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  153 (242)
T 3l8d_A          120 IMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI  153 (242)
T ss_dssp             EEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence            9864321      246788889999999988764

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=95.58  E-value=0.028  Score=46.20  Aligned_cols=95  Identities=20%  Similarity=0.345  Sum_probs=62.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++++ +||-+|||. |..+..+++. |. .+++++.+++..+.+++.    +....+ ...+..++.     .   ....
T Consensus        28 ~~~~-~vLdiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~~d~~~~~-----~---~~~~   94 (202)
T 2kw5_A           28 IPQG-KILCLAEGE-GRNACFLASL-GY-EVTAVDQSSVGLAKAKQLAQEKGVKITT-VQSNLADFD-----I---VADA   94 (202)
T ss_dssp             SCSS-EEEECCCSC-THHHHHHHTT-TC-EEEEECSSHHHHHHHHHHHHHHTCCEEE-ECCBTTTBS-----C---CTTT
T ss_pred             CCCC-CEEEECCCC-CHhHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCceEE-EEcChhhcC-----C---CcCC
Confidence            4567 999999876 7778888775 77 899999999887777653    322111 111111110     0   1357


Q ss_pred             CcEEEEcCCC------hHHHHHHHHhhcCCceEEEEcc
Q 017793          257 IDVSFDCVGF------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       257 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +|+|+.+...      ...+..+.+.|+++|.++....
T Consensus        95 fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  132 (202)
T 2kw5_A           95 WEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGF  132 (202)
T ss_dssp             CSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred             ccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9999875421      2356677788999999887653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=95.57  E-value=0.037  Score=47.27  Aligned_cols=81  Identities=21%  Similarity=0.302  Sum_probs=52.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce---eeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE---TAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|. ++..+..+.+.++.+.. +++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~-g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNV-TNPESIEAVLKAITDEF-GGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHHH-CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeC-CCHHHHHHHHHHHHHHc-CCC
Confidence            467899998 68999998888888899 688888888766544 3343221   1222 22334444444443322 479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        85 D~lv~nAg~   93 (248)
T 3op4_A           85 DILVNNAGI   93 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=95.56  E-value=0.06  Score=46.24  Aligned_cols=82  Identities=24%  Similarity=0.324  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+++++++++.+ ..++++... .+..+ ++..++.+.+.++.+. -+++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGK-FGRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH-CCCCC
Confidence            467899998 69999998888888899 6777777765544 445555332 11111 2223333444433332 24799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      ++|.+.|.
T Consensus        89 ~li~~Ag~   96 (265)
T 2o23_A           89 VAVNCAGI   96 (265)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=95.56  E-value=0.11  Score=44.75  Aligned_cols=81  Identities=30%  Similarity=0.375  Sum_probs=51.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc----CCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++    +... .  .|. ++.+++.+.+.++.+. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-   82 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-ATPEGVDAVVESVRSS-   82 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHHHHH-
Confidence            367899998 69999998888888899 688888887765432 222    4322 1  122 2223333334433332 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|+++++.|.
T Consensus        83 ~g~id~lv~~Ag~   95 (263)
T 3ai3_A           83 FGGADILVNNAGT   95 (263)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999873

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=95.56  E-value=0.032  Score=48.36  Aligned_cols=101  Identities=22%  Similarity=0.340  Sum_probs=67.4

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ...++++.+||-+|+|. |..+..+++......+++++.+++..+.+++.    +.+.+.....+..++.        ..
T Consensus        32 ~~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--------~~  102 (276)
T 3mgg_A           32 DTVYPPGAKVLEAGCGI-GAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP--------FE  102 (276)
T ss_dssp             TCCCCTTCEEEETTCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC--------SC
T ss_pred             cccCCCCCeEEEecCCC-CHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC--------CC
Confidence            35578899999999875 78888888886333899999999877766553    4332211111111110        11


Q ss_pred             CCCCcEEEEcC------CChHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...+|+|+...      .....+..+.+.|+++|.++...
T Consensus       103 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  142 (276)
T 3mgg_A          103 DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE  142 (276)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            45799998643      11356788889999999998764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.55  E-value=0.078  Score=45.29  Aligned_cols=83  Identities=18%  Similarity=0.185  Sum_probs=49.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHHHHc-CCcee--eecC-CCC-cchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QRLSIARNL-GADET--AKVS-TDI-EDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~--~~~~~~~~l-g~~~~--~~~~-~~~-~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|++.|+.+++++  +..+.+.+. ....+  +..+ ++. .+..+.+.++.+.. 
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc-
Confidence            367899998 699999988888888995466666665  333333333 11122  1111 122 23333344433322 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        83 g~id~lv~~Ag~   94 (254)
T 1sby_A           83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999874

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.55  E-value=0.096  Score=46.96  Aligned_cols=87  Identities=18%  Similarity=0.262  Sum_probs=62.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.+|.|+|.|.+|...++.++..|. .|++.+++.++ +.++++|..    +    .++.+.+        ...|+|+.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~----~----~~l~~~l--------~~aDvVil  210 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAE----F----KPLEDLL--------RESDFVVL  210 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCE----E----CCHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCcc----c----CCHHHHH--------hhCCEEEE
Confidence            46789999999999999999999998 78899888777 566666652    1    1222222        24799999


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEc
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g  287 (366)
                      +++...    .+ ...+..|+++..++.++
T Consensus       211 ~vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          211 AVPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            887543    12 24567788888777665

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=95.53  E-value=0.054  Score=47.64  Aligned_cols=82  Identities=21%  Similarity=0.263  Sum_probs=51.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc---CCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADETAKVS---TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~~~~~~---~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .+++   +...+..+.   ++..+..+.+.++.+. -
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA-F  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH-c
Confidence            467899998 68999998888888899 67778787766443 3333   212221111   2223333334444332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.53  E-value=0.025  Score=48.13  Aligned_cols=76  Identities=21%  Similarity=0.298  Sum_probs=46.9

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC---CcchHHHHHHHHHhhC-CC
Q 017793          182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD---IEDVDTDVGKIQNAMG-SG  256 (366)
Q Consensus       182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~  256 (366)
                      ..+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+     +  ....+..+   ..++.+.+.++.+..+ ++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~--~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----S--ASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----S--EEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----C--CcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            3567899998 68999998888888898 6777777765421     1  11111111   1223333333333222 57


Q ss_pred             CcEEEEcCC
Q 017793          257 IDVSFDCVG  265 (366)
Q Consensus       257 ~d~vld~~g  265 (366)
                      +|+++++.|
T Consensus        77 iD~lv~~Ag   85 (241)
T 1dhr_A           77 VDAILCVAG   85 (241)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEEccc
Confidence            999999987

>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A

Probab=95.53  E-value=0.016  Score=50.22  Aligned_cols=91  Identities=10%  Similarity=-0.010  Sum_probs=61.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ..+.+||++|+|. |..+..+++. + .++.+++.+++-.+.+++.-.        +.+.....+..++   +       
T Consensus        71 ~~~~~VL~iG~G~-G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~---~-------  137 (262)
T 2cmg_A           71 KELKEVLIVDGFD-LELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD---I-------  137 (262)
T ss_dssp             SCCCEEEEESSCC-HHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC---C-------
T ss_pred             CCCCEEEEEeCCc-CHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH---H-------
Confidence            4568999999876 7788888888 7 699999999987777665311        1111111111111   0       


Q ss_pred             CCCCcEEEEcCCChH-HHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCVGFDK-TMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~  286 (366)
                       ..+|+|+-....+. .+..+.+.|+++|.++..
T Consensus       138 -~~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv~~  170 (262)
T 2cmg_A          138 -KKYDLIFCLQEPDIHRIDGLKRMLKEDGVFISV  170 (262)
T ss_dssp             -CCEEEEEESSCCCHHHHHHHHTTEEEEEEEEEE
T ss_pred             -hhCCEEEECCCChHHHHHHHHHhcCCCcEEEEE
Confidence             46999986554433 477888999999999875

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.52  E-value=0.019  Score=49.55  Aligned_cols=98  Identities=15%  Similarity=0.239  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhhC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .++++.+||-+|||. |..+..+++. +...+++++.+++..+.+++    .|... +.....+..++.     .   ..
T Consensus        43 ~~~~~~~vLDiGcG~-G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~---~~  112 (267)
T 3kkz_A           43 NLTEKSLIADIGCGT-GGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-----F---RN  112 (267)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----C---CT
T ss_pred             cCCCCCEEEEeCCCC-CHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-----C---CC
Confidence            478899999999886 8888999988 43389999999987776654    34321 111111111111     0   13


Q ss_pred             CCCcEEEEcC-----CChHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCV-----GFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~-----g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +.||+|+...     +-...+..+.+.|+|+|.++...
T Consensus       113 ~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          113 EELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             TCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence            5799998632     32456778888999999998764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.51  E-value=0.058  Score=47.07  Aligned_cols=81  Identities=21%  Similarity=0.275  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADETAKVS---TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~~~~~~---~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +.. +..+.   ++..+....+.++.+. -
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~-~   83 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGE-AAALAGDVGDEALHEALVELAVRR-F   83 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCC-EEECCCCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCc-EEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            467899998 68999998888888899 688888888765543 333   222 21121   1222333333333332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        84 g~iD~lvnnAg~   95 (280)
T 3tox_A           84 GGLDTAFNNAGA   95 (280)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999883

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.51  E-value=0.084  Score=45.15  Aligned_cols=81  Identities=28%  Similarity=0.458  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+++++++++.+.+    ++.+... .+..+ ++..++.+.++++.+. .+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ-EG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cC
Confidence            467899998 69999998888888898 688888877654322    2234322 11111 2222333333333322 24


Q ss_pred             CCcEEEEcCC
Q 017793          256 GIDVSFDCVG  265 (366)
Q Consensus       256 ~~d~vld~~g  265 (366)
                      ++|+++.+.|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.50  E-value=0.049  Score=46.42  Aligned_cols=79  Identities=23%  Similarity=0.355  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+.++.--..+.  .+-.+. +.++++.+. -+++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~--~D~~~~-~~~~~~~~~-~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRV--LDVTKK-KQIDQFANE-VERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEE--CCTTCH-HHHHHHHHH-CSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEE--eeCCCH-HHHHHHHHH-hCCCCEEE
Confidence            367899998 69999998888888898 7888888877655433332111111  111121 122233221 35799999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      ++.|.
T Consensus        80 ~~Ag~   84 (246)
T 2ag5_A           80 NVAGF   84 (246)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=95.50  E-value=0.075  Score=45.92  Aligned_cols=82  Identities=22%  Similarity=0.314  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee-eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+ .+++++.... +..+ ++..+..+.+.++.+. -+++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE-MEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH-HTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH-cCCCC
Confidence            467899998 68999998888888899 6777888877655 3455664422 1111 2223333333333322 24799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++++.|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E

Probab=95.50  E-value=0.036  Score=47.32  Aligned_cols=102  Identities=17%  Similarity=0.200  Sum_probs=64.5

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----c--------CCceeeecCCCCcchHHHH
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----L--------GADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----l--------g~~~~~~~~~~~~~~~~~~  246 (366)
                      ..++++.+||=+|||. |..++.+++......+++++.+++..+.+++    +        +.+.+.....+..++   +
T Consensus        45 ~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~---l  120 (246)
T 2vdv_E           45 GQMTKKVTIADIGCGF-GGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF---L  120 (246)
T ss_dssp             -CBSCCEEEEEETCTT-SHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC---G
T ss_pred             ccCCCCCEEEEEcCCC-CHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH---H
Confidence            3456788888899876 7788888887643379999999987776643    2        443322222222221   1


Q ss_pred             HHHHHhhCCCCcEEEEcCCCh--------------HHHHHHHHhhcCCceEEEE
Q 017793          247 GKIQNAMGSGIDVSFDCVGFD--------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....  ....+|.|+-....+              ..+..+.+.|++||.+++.
T Consensus       121 ~~~~--~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~  172 (246)
T 2vdv_E          121 PNFF--EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI  172 (246)
T ss_dssp             GGTS--CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHhc--cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence            1110  134577776544433              5778889999999998874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=95.50  E-value=0.071  Score=45.73  Aligned_cols=82  Identities=17%  Similarity=0.251  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee-eecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+    ++.+.... +..+ ++..+..+.+.++.+.. +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-G   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            467899998 68999988887777899 688888887765433    23343321 1111 22233334444443322 4


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=95.50  E-value=0.12  Score=44.09  Aligned_cols=81  Identities=22%  Similarity=0.230  Sum_probs=51.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHH-HHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++ ++.+ .+++.+....   .|. ++.+++.+.+.++.+. -++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~   82 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-SQPGDVEAFGKQVIST-FGR   82 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-HSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeec-CCHHHHHHHHHHHHHH-cCC
Confidence            467899998 69999998888888899 677777776 5543 3455554321   122 2223333333333322 247


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++++.|.
T Consensus        83 id~lv~nAg~   92 (249)
T 2ew8_A           83 CDILVNNAGI   92 (249)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.49  E-value=0.066  Score=45.96  Aligned_cols=81  Identities=17%  Similarity=0.233  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-H---HcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +   +.+....   .|. ++..+....+.+..+. -
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~   89 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHV-GKAEDRERLVAMAVNL-H   89 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHH-c
Confidence            467899998 69999998888888899 688888887665432 2   2343221   122 2222333333333322 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        90 g~iD~lv~~Ag~  101 (260)
T 2zat_A           90 GGVDILVSNAAV  101 (260)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.49  E-value=0.022  Score=50.68  Aligned_cols=97  Identities=15%  Similarity=0.186  Sum_probs=64.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC---------CceeeecCCCCcchHHHHHHHHHh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG---------ADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg---------~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ..+.+||++|+|. |..+..+++..+..++++++.+++-.+.+++.-         .+.+....   .+..+.+..    
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~---~D~~~~l~~----  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---DDARAYLER----  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---SCHHHHHHH----
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEE---chHHHHHHh----
Confidence            4568999999775 677788888765568999999999888776531         11121111   233332222    


Q ss_pred             hCCCCcEEEEcCC-------------ChHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCVG-------------FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~g-------------~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....+|+|+....             ....+..+.+.|+++|.++..
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  194 (314)
T 1uir_A          148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (314)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence            2567999975332             235678889999999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=95.49  E-value=0.11  Score=44.88  Aligned_cols=82  Identities=20%  Similarity=0.163  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH----cCCceeeecC---CCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN----LGADETAKVS---TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~~~~~~---~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+ ++    .+...+..+.   ++..+..+.+.++.+. 
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT-   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence            467899998 68999998888888899 688888887765433 22    3332222111   2223333334443332 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|+++++.|.
T Consensus        85 ~g~id~lvnnAg~   97 (265)
T 3lf2_A           85 LGCASILVNNAGQ   97 (265)
T ss_dssp             HCSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.48  E-value=0.057  Score=46.40  Aligned_cols=81  Identities=17%  Similarity=0.208  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TA--KVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~--~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +... .+  |. ++..++...+.++.+...
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS-SQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCT-TSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCC-CCHHHHHHHHHHHHHhcC
Confidence            367889998 69999998888888899 688888887765433 222   4321 11  22 222233333333332114


Q ss_pred             CCCcEEEEcCC
Q 017793          255 SGIDVSFDCVG  265 (366)
Q Consensus       255 ~~~d~vld~~g  265 (366)
                      +.+|+++++.|
T Consensus        82 g~id~lvnnAg   92 (260)
T 2qq5_A           82 GRLDVLVNNAY   92 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence            57999999994

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=95.48  E-value=0.09  Score=47.07  Aligned_cols=131  Identities=11%  Similarity=0.145  Sum_probs=79.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCC---CCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          186 NVMIMGSGPIGLVTLLAARAFG---APRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g---~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ++.|+|+|.+|...+..++...   ++.+.+.++++++.+ +++++|.....      .++.+    +.+  ...+|+|+
T Consensus         4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~------~~~~~----ll~--~~~vD~V~   71 (334)
T 3ohs_X            4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAY------GSYEE----LAK--DPNVEVAY   71 (334)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEE------SSHHH----HHH--CTTCCEEE
T ss_pred             EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCccc------CCHHH----Hhc--CCCCCEEE
Confidence            6889999999987666665543   334555677776654 56678865432      13322    332  45799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEE-Eee-ccCCChHHHHHHHHCCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVI-GIF-RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~-~~~-~~~~~~~~~~~~l~~g~~  329 (366)
                      .|+....+...+..+|..|-. +++.-+.........    ..-.+++.+. +.. .+...++.+.+++++|.+
T Consensus        72 i~tp~~~H~~~~~~al~~Gkh-Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i  144 (334)
T 3ohs_X           72 VGTQHPQHKAAVMLCLAAGKA-VLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTL  144 (334)
T ss_dssp             ECCCGGGHHHHHHHHHHTTCE-EEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHHTTT
T ss_pred             ECCCcHHHHHHHHHHHhcCCE-EEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhcCCC
Confidence            999988888888888887644 455432211111111    1122333333 222 236678889999999887

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=95.47  E-value=0.069  Score=46.58  Aligned_cols=82  Identities=16%  Similarity=0.205  Sum_probs=50.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCc--eeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GAD--ETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~--~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +..  ..+..+ ++..+..+.+.++.+.. 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            467899998 68999998888888899 688888888765433 222   221  222111 22334444444443322 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=95.46  E-value=0.062  Score=49.37  Aligned_cols=97  Identities=21%  Similarity=0.147  Sum_probs=64.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +++|++||=.|||. |..++.+|+. |+. |++++.+++..+.+++    .|.+.-+.    ..+..+.+...    .+.
T Consensus       212 ~~~g~~VLDlg~Gt-G~~sl~~a~~-ga~-V~avDis~~al~~a~~n~~~ng~~~~~~----~~D~~~~l~~~----~~~  280 (393)
T 4dmg_A          212 VRPGERVLDVYSYV-GGFALRAARK-GAY-ALAVDKDLEALGVLDQAALRLGLRVDIR----HGEALPTLRGL----EGP  280 (393)
T ss_dssp             CCTTCEEEEESCTT-THHHHHHHHT-TCE-EEEEESCHHHHHHHHHHHHHHTCCCEEE----ESCHHHHHHTC----CCC
T ss_pred             hcCCCeEEEcccch-hHHHHHHHHc-CCe-EEEEECCHHHHHHHHHHHHHhCCCCcEE----EccHHHHHHHh----cCC
Confidence            56799999988764 6667777764 885 9999999998887765    34432111    13333333222    234


Q ss_pred             CcEEEEcCCC---------------hHHHHHHHHhhcCCceEEEEcc
Q 017793          257 IDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       257 ~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ||+|+-..+.               ...+..+.+.|+++|.++.+..
T Consensus       281 fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~  327 (393)
T 4dmg_A          281 FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC  327 (393)
T ss_dssp             EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence            9999865443               2466778889999999986643

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.45  E-value=0.063  Score=45.77  Aligned_cols=81  Identities=25%  Similarity=0.332  Sum_probs=51.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCce--eeecC-CCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE--TAKVS-TDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.+++++++.+. .++++...  .+..+ ++...+.+.+.++.+  -+++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA--VAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH--HSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh--hCCC
Confidence            467899998 69999998888888898 68888888776543 34444322  11111 222233333333332  2479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++.+.|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999999874

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=95.45  E-value=0.1  Score=43.62  Aligned_cols=98  Identities=10%  Similarity=0.038  Sum_probs=64.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.+||=+|||. |..++.+|+...-..|++++.+++..+.+++    .+.+.+....   .+....+....  ....+|
T Consensus        34 ~~~~vLDiGcG~-G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~---~Da~~~l~~~~--~~~~~d  107 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMC---HDAVEVLHKMI--PDNSLR  107 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEEC---SCHHHHHHHHS--CTTCEE
T ss_pred             CCCeEEEEeeeC-hHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEE---CCHHHHHHHHc--CCCChh
Confidence            567888889877 8888899987644489999999987766543    4544332222   23333222211  245688


Q ss_pred             EEEEcCCCh--------------HHHHHHHHhhcCCceEEEE
Q 017793          259 VSFDCVGFD--------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       259 ~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      .|+-....+              ..+..+.+.|++||.++..
T Consensus       108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~  149 (218)
T 3dxy_A          108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA  149 (218)
T ss_dssp             EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence            887653222              3788888999999998765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=95.45  E-value=0.14  Score=44.27  Aligned_cols=82  Identities=21%  Similarity=0.335  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|.+|...+..+...|+ .|+++++++++.+.+    ++.+... .+..+ ++..++.+.+.++.+. -+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH-CC
Confidence            467899998 69999998888888898 688888887665432    2234322 11111 2222333334333322 34


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999874

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.44  E-value=0.066  Score=47.99  Aligned_cols=90  Identities=16%  Similarity=0.170  Sum_probs=65.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.++|+..    .    ++    .++    -...|+|+.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~l----~el----l~~aDvV~l  225 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----L----PL----EEI----WPLCDFITV  225 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----C----CH----HHH----GGGCSEEEE
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----C----CH----HHH----HhcCCEEEE
Confidence            47799999999999999999999998 78888887665 3566777642    1    12    222    136899999


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEcccC
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +++...    .+ ...+..|++++.++.++...
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~  258 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGG  258 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTT
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCCcEEEECCCcc
Confidence            887542    12 35678899999888887543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=95.43  E-value=0.048  Score=46.71  Aligned_cols=76  Identities=11%  Similarity=0.078  Sum_probs=50.3

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH---HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR---NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+.   +.+.+... +  +..+..+.+.++.+.. +++|+++
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~-~--d~~~v~~~~~~~~~~~-g~iD~lv   77 (254)
T 1zmt_A            3 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-M--SEQEPAELIEAVTSAY-GQVDVLV   77 (254)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-C--CCCSHHHHHHHHHHHH-SCCCEEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEE-E--CHHHHHHHHHHHHHHh-CCCCEEE
Confidence            688998 68999998888888899 6888877776554433   23433221 1  3345555555444322 4799999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      ++.|.
T Consensus        78 ~nAg~   82 (254)
T 1zmt_A           78 SNDIF   82 (254)
T ss_dssp             EECCC
T ss_pred             ECCCc
Confidence            99874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.42  E-value=0.027  Score=47.70  Aligned_cols=95  Identities=11%  Similarity=0.153  Sum_probs=57.5

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+|||.| +|.+|...++.+...| . .|+++++++++.+.+...++. .+.  .+-.+. +.+.++.    .++|+||.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~--~Dl~d~-~~~~~~~----~~~D~vv~   94 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIM--GDVLNH-AALKQAM----QGQDIVYA   94 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEE--CCTTCH-HHHHHHH----TTCSEEEE
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEE--ecCCCH-HHHHHHh----cCCCEEEE
Confidence            5799998 6999999999888888 6 688887877654322111211 111  111222 2333332    36899999


Q ss_pred             cCCChHH---HHHHHHhhcC--CceEEEEcc
Q 017793          263 CVGFDKT---MSTALNATRP--GGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~~~---~~~~~~~l~~--~G~~v~~g~  288 (366)
                      +.+....   .+.+++.+..  .++++.++.
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence            9887532   2334455533  368888765

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.39  E-value=0.23  Score=41.33  Aligned_cols=75  Identities=16%  Similarity=0.034  Sum_probs=52.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+. .++...+ .-+.  .+ ...+++   ..-..+|+++-+.
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i-~gd~--~~-~~~l~~---a~i~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATII-HGDG--SH-KEILRD---AEVSKNDVVVILT   73 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEE-ESCT--TS-HHHHHH---HTCCTTCEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEE-EcCC--CC-HHHHHh---cCcccCCEEEEec
Confidence            58999999999999999988898 6888999999887654 4565432 2111  11 122222   2346899999999


Q ss_pred             CChH
Q 017793          265 GFDK  268 (366)
Q Consensus       265 g~~~  268 (366)
                      +...
T Consensus        74 ~~d~   77 (218)
T 3l4b_C           74 PRDE   77 (218)
T ss_dssp             SCHH
T ss_pred             CCcH
Confidence            9764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.39  E-value=0.083  Score=45.50  Aligned_cols=84  Identities=15%  Similarity=0.188  Sum_probs=51.9

Q ss_pred             CCCCCEEEEEC-C--CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecC-CCCcchHHHHHHHHHh
Q 017793          181 VGPETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVS-TDIEDVDTDVGKIQNA  252 (366)
Q Consensus       181 ~~~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~-~~~~~~~~~~~~~~~~  252 (366)
                      ..++.++||.| +  +++|.+.++.+...|+ +|+.++++++..+.++    +.+....+..+ ++..+..+.+.++.+.
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            34678999998 6  7999998888888899 6777767654433333    33422222211 2223344444444332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+++|+++.+.|.
T Consensus        90 -~g~id~lv~nAg~  102 (271)
T 3ek2_A           90 -WDSLDGLVHSIGF  102 (271)
T ss_dssp             -CSCEEEEEECCCC
T ss_pred             -cCCCCEEEECCcc
Confidence             3579999999873

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.38  E-value=0.079  Score=46.22  Aligned_cols=79  Identities=13%  Similarity=0.157  Sum_probs=53.4

Q ss_pred             HHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCc---eeeecCCCCcchHHHHHH
Q 017793          174 HACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD---ETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       174 ~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~---~~~~~~~~~~~~~~~~~~  248 (366)
                      .+++...+. .+.+++|+|+|++|.+++..+...|+..|.++.++.++.+ ++++++..   ....+.    +       
T Consensus       115 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~----~-------  183 (281)
T 3o8q_A          115 QDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE----Q-------  183 (281)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----G-------
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH----H-------
Confidence            344443333 5789999999999999888888899867888888887755 44555421   122211    0       


Q ss_pred             HHHhhCCCCcEEEEcCCCh
Q 017793          249 IQNAMGSGIDVSFDCVGFD  267 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~  267 (366)
                      +    ...+|+|++|++..
T Consensus       184 l----~~~aDiIInaTp~g  198 (281)
T 3o8q_A          184 L----KQSYDVIINSTSAS  198 (281)
T ss_dssp             C----CSCEEEEEECSCCC
T ss_pred             h----cCCCCEEEEcCcCC
Confidence            1    25799999998754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.38  E-value=0.061  Score=45.54  Aligned_cols=78  Identities=19%  Similarity=0.159  Sum_probs=49.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ++.++||.| +|.+|...++.+...|+ .|+++++++++.+.+. ++.....+..  +-.+. +.++++.+ .-+++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~--D~~~~-~~~~~~~~-~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCV--DLGDW-DATEKALG-GIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEEC--CTTCH-HHHHHHHT-TCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEe--cCCCH-HHHHHHHH-HcCCCCEE
Confidence            467899998 69999998888888898 6888888877655433 3321122221  11222 22333332 12468999


Q ss_pred             EEcCC
Q 017793          261 FDCVG  265 (366)
Q Consensus       261 ld~~g  265 (366)
                      +++.|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=95.38  E-value=0.031  Score=46.23  Aligned_cols=93  Identities=15%  Similarity=0.174  Sum_probs=64.5

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ..++++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++. +.... .     .++..    +.  ....|
T Consensus        39 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~-~-----~d~~~----~~--~~~~f  103 (211)
T 3e23_A           39 GELPAGAKILELGCGA-GYQAEAMLAA-GF-DVDATDGSPELAAEASRRLGRPVR-T-----MLFHQ----LD--AIDAY  103 (211)
T ss_dssp             TTSCTTCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHTSCCE-E-----CCGGG----CC--CCSCE
T ss_pred             HhcCCCCcEEEECCCC-CHHHHHHHHc-CC-eEEEECCCHHHHHHHHHhcCCceE-E-----eeecc----CC--CCCcE
Confidence            4467889999999875 7778888876 77 899999999988887764 43221 1     11111    10  15679


Q ss_pred             cEEEEcCCC--------hHHHHHHHHhhcCCceEEEE
Q 017793          258 DVSFDCVGF--------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+|+....-        ...+..+.+.|+++|.++..
T Consensus       104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~  140 (211)
T 3e23_A          104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYAS  140 (211)
T ss_dssp             EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            999875321        24667888899999998875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=95.37  E-value=0.15  Score=43.57  Aligned_cols=80  Identities=20%  Similarity=0.268  Sum_probs=50.3

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .  .|. ++..++.+.+.++.+. -+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~-~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDV-SDRDQVFAAVEQARKT-LG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHH-TT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHHH-hC
Confidence            46789998 68999998888888899 688888887665432 22   24321 1  122 2223333444443332 34


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++++.|.
T Consensus        79 ~id~lv~nAg~   89 (256)
T 1geg_A           79 GFDVIVNNAGV   89 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=95.37  E-value=0.1  Score=44.98  Aligned_cols=81  Identities=27%  Similarity=0.370  Sum_probs=52.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH----cCCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN----LGADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+ ++    .+... .  .|. ++..+..+.+.++.+. 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDL-AEPDAPAELARRAAEA-   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TSTTHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHHH-
Confidence            467899998 68999998888888899 688888887765433 22    34322 1  222 2334444444444432 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|+++++.|.
T Consensus        96 ~g~id~lv~nAg~  108 (266)
T 4egf_A           96 FGGLDVLVNNAGI  108 (266)
T ss_dssp             HTSCSEEEEECCC
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.36  E-value=0.12  Score=43.98  Aligned_cols=74  Identities=18%  Similarity=0.168  Sum_probs=47.4

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      -.+.++||.| +|++|.+.++.+...|+ .|+.++++++.   +++++....+ .+- ..+....+.++     .++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~-~D~-~~~~~~~~~~~-----~~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV-CDL-RKDLDLLFEKV-----KEVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE-CCT-TTCHHHHHHHS-----CCCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE-eeH-HHHHHHHHHHh-----cCCCEE
Confidence            3578899998 69999998888888899 68888777643   3445421211 111 12333222222     279999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +++.|.
T Consensus        86 v~~Ag~   91 (249)
T 1o5i_A           86 VLNAGG   91 (249)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.35  E-value=0.098  Score=43.93  Aligned_cols=78  Identities=18%  Similarity=0.181  Sum_probs=48.6

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      ++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+. +++... ..+..+-.+ .+.++++.+.....+|+++.+
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~D~~~-~~~v~~~~~~~~~~~d~lv~~   79 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNV-GYRARDLAS-HQEVEQLFEQLDSIPSTVVHS   79 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCC-CEEECCTTC-HHHHHHHHHSCSSCCSEEEEC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcc-CeEeecCCC-HHHHHHHHHHHhhcCCEEEEe
Confidence            589998 68999998888888899 5788888887766544 343221 111112122 223333333334456999999


Q ss_pred             CCC
Q 017793          264 VGF  266 (366)
Q Consensus       264 ~g~  266 (366)
                      .|.
T Consensus        80 Ag~   82 (230)
T 3guy_A           80 AGS   82 (230)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            873

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.35  E-value=0.027  Score=48.27  Aligned_cols=97  Identities=21%  Similarity=0.275  Sum_probs=65.6

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC---CceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ..++++.+||-+|||. |..+..+++. +. .+++++.+++..+.+++.-   ...+.....+..++.     +   ..+
T Consensus        35 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~---~~~  103 (263)
T 2yqz_A           35 HPKGEEPVFLELGVGT-GRIALPLIAR-GY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-----L---PDE  103 (263)
T ss_dssp             CCSSSCCEEEEETCTT-STTHHHHHTT-TC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-----S---CTT
T ss_pred             cCCCCCCEEEEeCCcC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-----C---CCC
Confidence            3578899999999876 7778888876 66 8999999999888887641   111111111111111     0   135


Q ss_pred             CCcEEEEcCC------ChHHHHHHHHhhcCCceEEEE
Q 017793          256 GIDVSFDCVG------FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       256 ~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .+|+|+....      ....+..+.+.|+++|.++..
T Consensus       104 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          104 SVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            6999987543      134677888999999998876

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.35  E-value=0.04  Score=50.10  Aligned_cols=91  Identities=14%  Similarity=0.223  Sum_probs=65.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|+++|++.+++.++.+.+.++|+...       .++    .++.    ...|+|+.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-------~~l----~ell----~~aDvV~l  227 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-------ENI----EELV----AQADIVTV  227 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-------SSH----HHHH----HTCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-------CCH----HHHH----hcCCEEEE
Confidence            57899999999999999999999999438888887766666677775321       122    2222    25899999


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEcc
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  288 (366)
                      +++...    .+ ...+..|++++.++.++.
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            887531    22 345678888888887764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.33  E-value=0.09  Score=45.56  Aligned_cols=81  Identities=22%  Similarity=0.385  Sum_probs=52.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-H---HcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .|.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+ +   +.+....   .|. ++..+..+.+.++.+ ..
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~-~~  101 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-TSESEIIEAFARLDE-QG  101 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-TCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHHHH-HC
Confidence            467899998 68999998888888899 788888887765433 2   2343321   121 222333344444433 24


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus       102 g~iD~lv~nAg~  113 (271)
T 4ibo_A          102 IDVDILVNNAGI  113 (271)
T ss_dssp             CCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999884

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.32  E-value=0.099  Score=45.95  Aligned_cols=80  Identities=19%  Similarity=0.301  Sum_probs=49.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc--------CCce-e--eecCCCCcchHHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL--------GADE-T--AKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l--------g~~~-~--~~~~~~~~~~~~~~~~~  249 (366)
                      .+.++||.| +|.+|.+.++.+...|+ .|+.++++.++.+.+ +++        +... .  .|. ++..++...+.++
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~   94 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-RNEEEVNNLVKST   94 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-TCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-CCHHHHHHHHHHH
Confidence            367899998 69999998888888898 688887887665432 222        2221 1  121 2222333333333


Q ss_pred             HHhhCCCCcEEEEcCC
Q 017793          250 QNAMGSGIDVSFDCVG  265 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g  265 (366)
                      .+.. +++|++|.+.|
T Consensus        95 ~~~~-g~id~li~~Ag  109 (303)
T 1yxm_A           95 LDTF-GKINFLVNNGG  109 (303)
T ss_dssp             HHHH-SCCCEEEECCC
T ss_pred             HHHc-CCCCEEEECCC
Confidence            3222 47999999988

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.31  E-value=0.11  Score=45.25  Aligned_cols=81  Identities=21%  Similarity=0.190  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-------------ChhHHHHH----HHcCCcee---eecCCCCcc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-------------DVQRLSIA----RNLGADET---AKVSTDIED  241 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-------------~~~~~~~~----~~lg~~~~---~~~~~~~~~  241 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++             ++++.+.+    ++.+....   .|. ++..+
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~   91 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV-RDDAA   91 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT-TCHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHH
Confidence            478899998 68999998888888899 6777765             44444332    22343221   122 22233


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      ..+.+.++.+. -+++|+++++.|.
T Consensus        92 v~~~~~~~~~~-~g~id~lvnnAg~  115 (280)
T 3pgx_A           92 LRELVADGMEQ-FGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHH-HCCCCEEEECCCC
T ss_pred             HHHHHHHHHHH-cCCCCEEEECCCC
Confidence            44444444332 2479999999874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.30  E-value=0.073  Score=46.25  Aligned_cols=82  Identities=21%  Similarity=0.172  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+.++||.| +|.+|.+.++.+...|+ .|++++++.++.+.+ .+++... .+..+ ++..++.+.+.++.+. .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR-YGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh-CCCCC
Confidence            357899998 69999998888888899 678887877765543 4444322 11111 2223333334333332 24799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++.+.|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=95.30  E-value=0.092  Score=44.88  Aligned_cols=81  Identities=17%  Similarity=0.280  Sum_probs=51.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCcee-e--ecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET-A--KVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .++++.... +  |. ++..++.+.+.++.+.. +.+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~-g~i   81 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDV-SSEADWTLVMAAVQRRL-GTL   81 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCT-TCHHHHHHHHHHHHHHH-CSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccC-CCHHHHHHHHHHHHHHc-CCC
Confidence            367899998 69999998888888899 68888888776553 344543221 1  21 22233333344333322 469


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        82 d~lv~~Ag~   90 (253)
T 1hxh_A           82 NVLVNNAGI   90 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.29  E-value=0.0074  Score=51.24  Aligned_cols=99  Identities=11%  Similarity=0.044  Sum_probs=63.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC---ceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA---DETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+++.+||-+|||. |..+..+++. +...+++++.+++-.+.+++...   ..+....   .++...+.   ....+.|
T Consensus        58 ~~~~~~vLDiGcGt-G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~---~d~~~~~~---~~~~~~f  129 (236)
T 1zx0_A           58 SSKGGRVLEVGFGM-AIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAP---TLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGG---GSCTTCE
T ss_pred             CCCCCeEEEEeccC-CHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEe---cCHHHhhc---ccCCCce
Confidence            46789999999875 7777777654 44489999999998888876431   2221111   22222110   1123579


Q ss_pred             cEEEE-cCC----Ch------HHHHHHHHhhcCCceEEEEc
Q 017793          258 DVSFD-CVG----FD------KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       258 d~vld-~~g----~~------~~~~~~~~~l~~~G~~v~~g  287 (366)
                      |+|+. +.+    ..      ..+..+.+.|+++|+++.+.
T Consensus       130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  170 (236)
T 1zx0_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence            99987 222    11      23677889999999998764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.28  E-value=0.059  Score=50.69  Aligned_cols=95  Identities=15%  Similarity=0.171  Sum_probs=58.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.+|+|+|+|.+|.+++..+... |. .|++++++.++.+.+.+ .+... +..+-  .+.. .+.+..    .++|+|
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~-~~~D~--~d~~-~l~~~l----~~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKA-ISLDV--TDDS-ALDKVL----ADNDVV   92 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEE-EECCT--TCHH-HHHHHH----HTSSEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcE-EEEec--CCHH-HHHHHH----cCCCEE
Confidence            356899999999999988888777 56 68888888887665443 23321 11111  1222 233332    269999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ++|++..........++..+-.++..
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEe
Confidence            99998653333344556666666654

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.28  E-value=0.049  Score=45.34  Aligned_cols=98  Identities=19%  Similarity=0.235  Sum_probs=66.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ..++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.+......     .++.. +.......+..||+|
T Consensus        50 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~-~~~~~~~~~~~fD~v  120 (227)
T 3e8s_A           50 GRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHL-----ASYAQ-LAEAKVPVGKDYDLI  120 (227)
T ss_dssp             HTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEE-----CCHHH-HHTTCSCCCCCEEEE
T ss_pred             cCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccch-----hhHHh-hcccccccCCCccEE
Confidence            35678999999876 7777788776 77 8999999999999888874333222     11111 100001123459999


Q ss_pred             EEcCC-----ChHHHHHHHHhhcCCceEEEEc
Q 017793          261 FDCVG-----FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       261 ld~~g-----~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +....     -...+..+.+.|+++|.++...
T Consensus       121 ~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  152 (227)
T 3e8s_A          121 CANFALLHQDIIELLSAMRTLLVPGGALVIQT  152 (227)
T ss_dssp             EEESCCCSSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EECchhhhhhHHHHHHHHHHHhCCCeEEEEEe
Confidence            87532     2357888899999999998764

>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*

Probab=95.28  E-value=0.075  Score=43.25  Aligned_cols=99  Identities=16%  Similarity=0.230  Sum_probs=64.4

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      +.....++.+||-+|+|. |..+..+++. |. .+++++.+++..+.+++    .+...+.....   ++..    +.  
T Consensus        26 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~~----~~--   93 (199)
T 2xvm_A           26 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVV---DLNN----LT--   93 (199)
T ss_dssp             HHTTTSCSCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC---CGGG----CC--
T ss_pred             HHhhccCCCeEEEEcCCC-CHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEc---chhh----CC--
Confidence            334556788999999875 7788888886 77 89999999988777654    23322111111   1111    00  


Q ss_pred             hCCCCcEEEEcCC--------ChHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVG--------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g--------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....+|+|+....        ....+..+.+.|+++|.++.+.
T Consensus        94 ~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  136 (199)
T 2xvm_A           94 FDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  136 (199)
T ss_dssp             CCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence            1457999986532        1235677888999999987664

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.27  E-value=0.24  Score=44.38  Aligned_cols=136  Identities=15%  Similarity=0.117  Sum_probs=80.0

Q ss_pred             CCCCC--EEEEECCC-HHHHHHHHHHHHC--CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          181 VGPET--NVMIMGSG-PIGLVTLLAARAF--GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       181 ~~~~~--~vlI~G~g-~vG~~ai~la~~~--g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .|+.+  +|.|+|+| .+|..-+..++..  +++.+.+++.++++.+ +++++|.....      .++.+    +.+  .
T Consensus        13 ~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~------~~~~~----ll~--~   80 (340)
T 1zh8_A           13 MKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEE----LLE--S   80 (340)
T ss_dssp             ---CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHH----HHH--S
T ss_pred             cCCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCccc------CCHHH----Hhc--C
Confidence            44444  67889999 7887666666654  4644566677777665 55667764332      13332    322  3


Q ss_pred             CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech---H-hhhcCcEEEEe--eccCCChHHHHHHHHCCC
Q 017793          255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---P-AAAREVDVIGI--FRYRSTWPLCIEFLRSGK  328 (366)
Q Consensus       255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~  328 (366)
                      ..+|+|+.|++...+.+.+..+|..|= -+++.-+.........   . .-..++.+.-.  ..+...++.+.+++++|.
T Consensus        81 ~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~  159 (340)
T 1zh8_A           81 GLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGA  159 (340)
T ss_dssp             SCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCC
Confidence            579999999998888888888887764 4455422211111111   1 12233333322  223667888899999988


Q ss_pred             C
Q 017793          329 I  329 (366)
Q Consensus       329 ~  329 (366)
                      +
T Consensus       160 i  160 (340)
T 1zh8_A          160 I  160 (340)
T ss_dssp             T
T ss_pred             C
Confidence            7

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.27  E-value=0.039  Score=48.93  Aligned_cols=95  Identities=14%  Similarity=0.140  Sum_probs=63.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHc-CC---ceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNL-GA---DETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l-g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+||++|+|. |..+..+++.. +. ++.+++.+++-.+.+++. +.   +.+..+.   .+..+.+...   ....||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~---~Da~~~l~~~---~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV---DDARMVAESF---TPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE---SCHHHHHHTC---CTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE---CcHHHHHhhc---cCCCCCE
Confidence            4899999876 77888888865 56 899999999999988874 22   1111111   2333332221   2467999


Q ss_pred             EEEcCC----------ChHHHHHHHHhhcCCceEEEEc
Q 017793          260 SFDCVG----------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       260 vld~~g----------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ||-...          ..+.+..+.+.|+++|.++...
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence            976321          1356788899999999988654

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.26  E-value=0.047  Score=50.93  Aligned_cols=103  Identities=12%  Similarity=0.124  Sum_probs=67.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH-CCC--CeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARA-FGA--PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~-~g~--~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ++...+|||+|+|+||..++.++.. .+.  ..|+.++..+.+.+..+.+|... ....-+..+..+.+..+.   .++ 
T Consensus        10 ~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~-~~~~Vdadnv~~~l~aLl---~~~-   84 (480)
T 2ph5_A           10 ILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSF-KLQQITPQNYLEVIGSTL---EEN-   84 (480)
T ss_dssp             BCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEE-EECCCCTTTHHHHTGGGC---CTT-
T ss_pred             ecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCce-eEEeccchhHHHHHHHHh---cCC-
Confidence            4456789999999999998877765 444  25777777766666666677532 222222344434343332   333 


Q ss_pred             cEEEEcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793          258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       258 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      |+|++++-....+..+-.|+..|-.++....
T Consensus        85 DvVIN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           85 DFLIDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             CEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             CEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence            9999987655566667677788888887753

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.26  E-value=0.062  Score=45.37  Aligned_cols=101  Identities=20%  Similarity=0.280  Sum_probs=66.8

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ......++.+||-+|+|. |..+..+++. |...+++++.+++..+.+++.....-+.+..  .+.....  .   ....
T Consensus        37 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~d~~~~~--~---~~~~  107 (243)
T 3bkw_A           37 AMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYER--ADLDKLH--L---PQDS  107 (243)
T ss_dssp             HHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEE--CCGGGCC--C---CTTC
T ss_pred             HhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEE--cChhhcc--C---CCCC
Confidence            345566889999999876 7777788776 6558999999999998888764321111111  1111100  0   1357


Q ss_pred             CcEEEEcCCC------hHHHHHHHHhhcCCceEEEE
Q 017793          257 IDVSFDCVGF------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       257 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +|+|+....-      ...+..+.+.|+++|+++..
T Consensus       108 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  143 (243)
T 3bkw_A          108 FDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFS  143 (243)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEE
Confidence            9999875421      34677888999999998875

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=95.26  E-value=0.14  Score=42.98  Aligned_cols=101  Identities=16%  Similarity=0.250  Sum_probs=64.1

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhH----HHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQR----LSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~----~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +...++++++||-+|||. |..+..+++..| ...|++++.+++.    .+.+++.  ..+.....+..+.. .+    .
T Consensus        71 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~-~~----~  142 (233)
T 2ipx_A           71 DQIHIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPH-KY----R  142 (233)
T ss_dssp             SCCCCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGG-GG----G
T ss_pred             heecCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChh-hh----c
Confidence            345688999999999887 888999999864 2489999999653    3444443  11111112211110 00    0


Q ss_pred             hhCCCCcEEEEcCCChH----HHHHHHHhhcCCceEEE
Q 017793          252 AMGSGIDVSFDCVGFDK----TMSTALNATRPGGKVCL  285 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~  285 (366)
                      .....+|+|+.......    .+..+.+.|+++|+++.
T Consensus       143 ~~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i  180 (233)
T 2ipx_A          143 MLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVI  180 (233)
T ss_dssp             GGCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEE
Confidence            11457999987665432    25567889999999886

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.26  E-value=0.033  Score=48.65  Aligned_cols=96  Identities=16%  Similarity=0.133  Sum_probs=56.9

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +|||.| +|.+|...++.+... |. .|+++.+++++...+...+...+ .  .+-.+. +.+.+.    -.++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~-~--~D~~d~-~~l~~~----~~~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVR-Q--LDYFNQ-ESMVEA----FKGMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEE-E--CCTTCH-HHHHHH----TTTCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEE-E--cCCCCH-HHHHHH----HhCCCEEEEe
Confidence            589998 699999988888777 77 57777777766443333333222 1  111121 223333    2479999999


Q ss_pred             CCCh-------HHHHHHHHhhcCC--ceEEEEcccC
Q 017793          264 VGFD-------KTMSTALNATRPG--GKVCLIGLAK  290 (366)
Q Consensus       264 ~g~~-------~~~~~~~~~l~~~--G~~v~~g~~~  290 (366)
                      .+..       .....+++.+...  ++++.++...
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            8752       1223344444433  4788876543

>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*

Probab=95.26  E-value=0.037  Score=48.19  Aligned_cols=96  Identities=17%  Similarity=0.150  Sum_probs=63.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +++|++||-.+||. |.+++.+|+. |+..|++++.+++..+++++    .+... +..+..+..++.         ...
T Consensus       123 ~~~g~~VlD~~aG~-G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~---------~~~  191 (278)
T 3k6r_A          123 AKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP---------GEN  191 (278)
T ss_dssp             CCTTCEEEETTCTT-TTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC---------CCS
T ss_pred             cCCCCEEEEecCcC-cHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc---------ccc
Confidence            78999999887654 5566777775 55589999999998888765    34432 322333332321         135


Q ss_pred             CCcEEEEcCC--ChHHHHHHHHhhcCCceEEEEc
Q 017793          256 GIDVSFDCVG--FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       256 ~~d~vld~~g--~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+|.|+-...  ....+..++++|++||.+....
T Consensus       192 ~~D~Vi~~~p~~~~~~l~~a~~~lk~gG~ih~~~  225 (278)
T 3k6r_A          192 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  225 (278)
T ss_dssp             CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCEEEECCCCcHHHHHHHHHHHcCCCCEEEEEe
Confidence            6887654322  2356788999999999876654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=95.25  E-value=0.14  Score=43.43  Aligned_cols=82  Identities=20%  Similarity=0.299  Sum_probs=50.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----LGADE-TAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+.+     .+... .+..+ .+..++.+.+.++.+. -
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL-V   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh-c
Confidence            367899998 69999998888888898 68888888766543322     24322 11111 2223333334333322 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|++|.+.|.
T Consensus        84 ~~~d~vi~~Ag~   95 (248)
T 2pnf_A           84 DGIDILVNNAGI   95 (248)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=95.25  E-value=0.075  Score=49.15  Aligned_cols=102  Identities=12%  Similarity=0.171  Sum_probs=70.3

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++...++++.+||-+|+|. |..+..+++ .|. .+++++.+++..+.+++.+.......-.  .+.   ...+. ...+
T Consensus       100 ~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~--~~~---~~~l~-~~~~  170 (416)
T 4e2x_A          100 LATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFFE--KAT---ADDVR-RTEG  170 (416)
T ss_dssp             HHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCCS--HHH---HHHHH-HHHC
T ss_pred             HHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeeec--hhh---Hhhcc-cCCC
Confidence            3556678899999999876 767777776 477 8999999999999998886654322110  111   11111 1246


Q ss_pred             CCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEE
Q 017793          256 GIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       256 ~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .||+|+..-.     . ...+..+.+.|+++|.++..
T Consensus       171 ~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~  207 (416)
T 4e2x_A          171 PANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFE  207 (416)
T ss_dssp             CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence            7999986432     1 34678888999999998874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.24  E-value=0.15  Score=44.00  Aligned_cols=81  Identities=16%  Similarity=0.343  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc----CCcee---eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADET---AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~---~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++    +....   .|. ++..++.+.+.++.+..
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-SNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            467899998 69999998888888899 688887887665432 222    43321   122 22233334444333322


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +++|+++++.|.
T Consensus        98 -g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 -GKLDTVVNAAGI  109 (267)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.22  E-value=0.18  Score=44.12  Aligned_cols=80  Identities=15%  Similarity=0.245  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc----CCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|.+|.+.+..+...|+ .|+.+++++++.+.+ +++    +... .  .|. ++..++.+.+.++.+. 
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-RDPDMVQNTVSELIKV-  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-TCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-CCHHHHHHHHHHHHHH-
Confidence            467899998 69999998888888898 688888887665432 222    4322 1  122 2223333333333322 


Q ss_pred             CCCCcEEEEcCC
Q 017793          254 GSGIDVSFDCVG  265 (366)
Q Consensus       254 ~~~~d~vld~~g  265 (366)
                      -+.+|+++.+.|
T Consensus       102 ~g~id~li~~Ag  113 (302)
T 1w6u_A          102 AGHPNIVINNAA  113 (302)
T ss_dssp             TCSCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            357999999987

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=95.21  E-value=0.032  Score=46.46  Aligned_cols=104  Identities=14%  Similarity=0.257  Sum_probs=68.2

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +....++++.+||-+|+|. |..+..+++..+ ...+++++.+++..+.+++.    +...+.....+..++.     . 
T Consensus        30 ~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-----~-  102 (219)
T 3dh0_A           30 LKEFGLKEGMTVLDVGTGA-GFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP-----L-  102 (219)
T ss_dssp             HHHHTCCTTCEEEESSCTT-CTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-----S-
T ss_pred             HHHhCCCCCCEEEEEecCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-----C-
Confidence            3455678899999999876 778888888763 23899999999877766543    3322211111111110     0 


Q ss_pred             HhhCCCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEcc
Q 017793          251 NAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                        ....+|+|+....-      ...+..+.+.|+++|.++....
T Consensus       103 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~  144 (219)
T 3dh0_A          103 --PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW  144 (219)
T ss_dssp             --CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence              13569999864321      3467888899999999988753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.21  E-value=0.19  Score=43.72  Aligned_cols=82  Identities=15%  Similarity=0.254  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH-HHc---CCceeeecC---CCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSIA-RNL---GADETAKVS---TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~-~~l---g~~~~~~~~---~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++ ++++.+.+ +++   ....+..+.   ++..++.+.+.++.+. 
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR-  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence            367899998 68999998888888899 6777766 44443322 222   112221111   2223334444444332 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|+++++.|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            3579999999885

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.21  E-value=0.16  Score=46.04  Aligned_cols=89  Identities=20%  Similarity=0.282  Sum_probs=63.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      |.+|.|+|.|.+|...++.++..|. +|++.+++. +.+.+.+.|+..        .++    .++.    ...|+|+-+
T Consensus       176 gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~--------~~l----~ell----~~aDvV~l~  237 (365)
T 4hy3_A          176 GSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP--------ASL----EDVL----TKSDFIFVV  237 (365)
T ss_dssp             SSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE--------CCH----HHHH----HSCSEEEEC
T ss_pred             CCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee--------CCH----HHHH----hcCCEEEEc
Confidence            7799999999999999999999999 788888775 344555667531        122    2232    358999887


Q ss_pred             CCChH----HH-HHHHHhhcCCceEEEEcccC
Q 017793          264 VGFDK----TM-STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       264 ~g~~~----~~-~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +....    .+ ...+..|++++.++.++...
T Consensus       238 ~Plt~~T~~li~~~~l~~mk~gailIN~aRG~  269 (365)
T 4hy3_A          238 AAVTSENKRFLGAEAFSSMRRGAAFILLSRAD  269 (365)
T ss_dssp             SCSSCC---CCCHHHHHTSCTTCEEEECSCGG
T ss_pred             CcCCHHHHhhcCHHHHhcCCCCcEEEECcCCc
Confidence            76421    11 35678899999888876443

>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}

Probab=95.21  E-value=0.089  Score=44.56  Aligned_cols=104  Identities=19%  Similarity=0.131  Sum_probs=66.7

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-DETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ..++++.+||-+|||. |..+..+++.. . .|++++.+++..+.+++.-. ..+.....+..++... .....  +..+
T Consensus        52 ~~~~~~~~vLD~GcG~-G~~~~~la~~~-~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~-~~~~~--~~~~  125 (245)
T 3ggd_A           52 LLFNPELPLIDFACGN-GTQTKFLSQFF-P-RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQA-AQIHS--EIGD  125 (245)
T ss_dssp             TTSCTTSCEEEETCTT-SHHHHHHHHHS-S-CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHH-HHHHH--HHCS
T ss_pred             hccCCCCeEEEEcCCC-CHHHHHHHHhC-C-CEEEEECCHHHHHHHHHhCcccCceEEECcccccccc-ccccc--ccCc
Confidence            3478899999999884 88888888864 4 79999999998888876432 1121111222222111 11111  2358


Q ss_pred             cEEEEcC-----C---ChHHHHHHHHhhcCCceEEEEcc
Q 017793          258 DVSFDCV-----G---FDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       258 d~vld~~-----g---~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      |+|+...     .   -...+..+.+.|+++|+++.+..
T Consensus       126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  164 (245)
T 3ggd_A          126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL  164 (245)
T ss_dssp             CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            8997643     2   12467788899999999877654

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.20  E-value=0.07  Score=46.31  Aligned_cols=97  Identities=20%  Similarity=0.254  Sum_probs=65.8

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCC
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .....+++.+||-+|||. |..+..+++ .+. .+++++.+++..+.+++.... ....  .+..++.         ...
T Consensus        51 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~--~d~~~~~---------~~~  116 (279)
T 3ccf_A           51 QLLNPQPGEFILDLGCGT-GQLTEKIAQ-SGA-EVLGTDNAATMIEKARQNYPHLHFDV--ADARNFR---------VDK  116 (279)
T ss_dssp             HHHCCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHCTTSCEEE--CCTTTCC---------CSS
T ss_pred             HHhCCCCCCEEEEecCCC-CHHHHHHHh-CCC-eEEEEECCHHHHHHHHhhCCCCEEEE--CChhhCC---------cCC
Confidence            334567889999999876 778888888 666 899999999988887764211 1111  1111111         135


Q ss_pred             CCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793          256 GIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       256 ~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .||+|+....-      ...+..+.+.|+++|+++...
T Consensus       117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~  154 (279)
T 3ccf_A          117 PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF  154 (279)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence            79999875321      246778889999999988753

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.18  E-value=0.045  Score=46.23  Aligned_cols=98  Identities=10%  Similarity=0.057  Sum_probs=64.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHH-HHHHhhC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVG-KIQNAMG  254 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~-~~~~~~~  254 (366)
                      ..++.+||-+|+|. |..++.+++......|++++.+++..+.+++    .+.. .+.....   +..+.+. .+    .
T Consensus        69 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~----~  140 (232)
T 3ntv_A           69 MNNVKNILEIGTAI-GYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG---NALEQFENVN----D  140 (232)
T ss_dssp             HHTCCEEEEECCSS-SHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES---CGGGCHHHHT----T
T ss_pred             hcCCCEEEEEeCch-hHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHHHHHHhhc----c
Confidence            45678999999876 7788888885433489999999988777654    4432 2211112   2222222 22    4


Q ss_pred             CCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..||+|+-....   ...+..+.+.|+++|.++.-
T Consensus       141 ~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          141 KVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             SCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            679999754432   23567778899999998774

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=95.18  E-value=0.072  Score=45.89  Aligned_cols=105  Identities=13%  Similarity=0.128  Sum_probs=65.9

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-------Cc-eeeecCCCCcchHHHHHHHH
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-------AD-ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-------~~-~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ...+++++||-+|+|. |..++.+++......|++++.+++..+.+++.-       .. .+..+..+..++   .....
T Consensus        32 ~~~~~~~~VLDlG~G~-G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~---~~~~~  107 (260)
T 2ozv_A           32 VADDRACRIADLGAGA-GAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR---AKARV  107 (260)
T ss_dssp             CCCCSCEEEEECCSSS-SHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC---HHHHH
T ss_pred             hcccCCCEEEEeCChH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH---hhhhh
Confidence            4567888999888765 667777787764338999999999888887632       21 122222222222   11110


Q ss_pred             -H-hhCCCCcEEEEcCC------------------------ChHHHHHHHHhhcCCceEEEEc
Q 017793          251 -N-AMGSGIDVSFDCVG------------------------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 -~-~~~~~~d~vld~~g------------------------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                       . .....||+|+...+                        -...+..+.+.|+++|+++.+-
T Consensus       108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  170 (260)
T 2ozv_A          108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS  170 (260)
T ss_dssp             HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence             0 11357999987511                        1235677788999999998763

>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51

Probab=95.18  E-value=0.2  Score=44.76  Aligned_cols=99  Identities=16%  Similarity=0.176  Sum_probs=62.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce--eeecCCCCcchHHHHHHHHHhhC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE--TAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~--~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ..++.+||-+|||. |..++.+++ .|+ .|++++.+++..+.+++    .+.+.  +..+.   .+..+.+..... .+
T Consensus       151 ~~~~~~VLDlgcGt-G~~sl~la~-~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~---~D~~~~l~~~~~-~~  223 (332)
T 2igt_A          151 ADRPLKVLNLFGYT-GVASLVAAA-AGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC---EDAMKFIQREER-RG  223 (332)
T ss_dssp             SSSCCEEEEETCTT-CHHHHHHHH-TTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC---SCHHHHHHHHHH-HT
T ss_pred             cCCCCcEEEccccc-CHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEE---CcHHHHHHHHHh-cC
Confidence            35678999998764 666667776 477 89999999998877765    34331  22222   233333332211 14


Q ss_pred             CCCcEEEEcCCC----------------hHHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVGF----------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g~----------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..||+|+-....                ...+..+.+.|+++|.++..
T Consensus       224 ~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~  271 (332)
T 2igt_A          224 STYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVL  271 (332)
T ss_dssp             CCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred             CCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence            579999773220                24566778899999996554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.18  E-value=0.079  Score=45.83  Aligned_cols=82  Identities=18%  Similarity=0.244  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++ +++..+.+    ++.+... .+..+ ++..+..+.+.++.+. .
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS-D  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            467899998 68999988888888899 5666666 44443332    3344332 12111 2223334444444332 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999885

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.18  E-value=0.094  Score=46.71  Aligned_cols=89  Identities=17%  Similarity=0.100  Sum_probs=62.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV-DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .|.+|.|+|.|.+|...++.++..|. +|++.++ +.++ +.+.++|+..    .   .++.+    +.    ...|+|+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~----~---~~l~e----ll----~~aDvVi  207 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF----H---DSLDS----LL----SVSQFFS  207 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE----C---SSHHH----HH----HHCSEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE----c---CCHHH----HH----hhCCEEE
Confidence            46789999999999999999999998 7889888 7666 3556677632    1   12222    22    2479999


Q ss_pred             EcCCChH----HH-HHHHHhhcCCceEEEEcc
Q 017793          262 DCVGFDK----TM-STALNATRPGGKVCLIGL  288 (366)
Q Consensus       262 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~  288 (366)
                      -++....    .+ ...+..|++++.++.++.
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             EeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            8887431    12 345678888888887764

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.18  E-value=0.1  Score=47.07  Aligned_cols=89  Identities=21%  Similarity=0.224  Sum_probs=62.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|+ +|++.+++. +.+.+.+.|...+       .++.+    +.    ...|+|+-
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~e----ll----~~aDiV~l  221 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDA----LF----EQSDVLSV  221 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHH----HH----HHCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHH----HH----hhCCEEEE
Confidence            36799999999999999999999999 788887765 3455566776321       12222    22    24789988


Q ss_pred             cCCChH-H----HHHHHHhhcCCceEEEEcc
Q 017793          263 CVGFDK-T----MSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~~-~----~~~~~~~l~~~G~~v~~g~  288 (366)
                      ++.... +    -...+..|+++..++.++.
T Consensus       222 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          222 HLRLNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             eccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            876321 1    1356678899998888763

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.17  E-value=0.097  Score=49.09  Aligned_cols=82  Identities=21%  Similarity=0.286  Sum_probs=52.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH---HHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR---LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~---~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ++.++||.| +|++|...++.+...|+ +|+.+++++..   .+..++++...+ .|. ++.......+.++.+..++.+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dv-td~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDV-TADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCT-TSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHHHcCCCc
Confidence            467899998 69999988777777899 67777665432   233445554432 222 333455555555544334459


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999875

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=95.15  E-value=0.065  Score=45.68  Aligned_cols=98  Identities=17%  Similarity=0.221  Sum_probs=65.9

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-DETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ....++.+||-+|||. |..+..+++. |...+++++.+++..+.+++... ..+.....+..++.        ...+.+
T Consensus        40 ~~~~~~~~vLD~GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~--------~~~~~f  109 (253)
T 3g5l_A           40 LPDFNQKTVLDLGCGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA--------IEPDAY  109 (253)
T ss_dssp             CCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC--------CCTTCE
T ss_pred             hhccCCCEEEEECCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC--------CCCCCe
Confidence            4455889999999876 7788888876 55589999999998888877532 11111111111110        113679


Q ss_pred             cEEEEcCCC------hHHHHHHHHhhcCCceEEEE
Q 017793          258 DVSFDCVGF------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~vld~~g~------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+|+.+..-      ...+..+.+.|+++|.++..
T Consensus       110 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~  144 (253)
T 3g5l_A          110 NVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS  144 (253)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence            999875421      34677888999999998875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.14  E-value=0.15  Score=44.42  Aligned_cols=81  Identities=25%  Similarity=0.304  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEc-CChhHHHHH----HHcCCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD-VDVQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++ +++++.+.+    ++.+... .  .|. ++..+..+.+.++.+..
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADL-ADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCT-TSGGGHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHHHc
Confidence            467899998 68999998888888899 566665 455544322    2334332 1  122 23344455555544332


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +++|+++++.|.
T Consensus       106 -g~iD~lvnnAg~  117 (280)
T 4da9_A          106 -GRIDCLVNNAGI  117 (280)
T ss_dssp             -SCCCEEEEECC-
T ss_pred             -CCCCEEEECCCc
Confidence             479999999985

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.14  E-value=0.055  Score=49.56  Aligned_cols=90  Identities=17%  Similarity=0.146  Sum_probs=63.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.++.|+|.|.+|...++.++..|. +|++.+++.++.+.++++|+...       .++    .++.    ...|+|+.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l----~ell----~~aDvV~l  253 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATR----EDMY----PVCDVVTL  253 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSH----HHHG----GGCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCH----HHHH----hcCCEEEE
Confidence            57899999999999999999999998 78888887666666677776421       112    2221    35889988


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEcc
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  288 (366)
                      ++....    .+ ...+..|+++..++.++.
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ecCCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            876321    12 345677888887777764

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.12  E-value=0.2  Score=43.42  Aligned_cols=85  Identities=18%  Similarity=0.168  Sum_probs=57.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|.|+|+|.+|.+.+..+...|. .|+++++++++.+.+.+.|..... . .   +..       + . ..+|+|+-|+.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~-~-~---~~~-------~-~-~~~D~vi~av~   66 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEA-G-Q---DLS-------L-L-QTAKIIFLCTP   66 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEE-E-S---CGG-------G-G-TTCSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccc-c-C---CHH-------H-h-CCCCEEEEECC
Confidence            68899999999998888888888 788889999988888777753111 1 1   111       1 1 36899999998


Q ss_pred             ChHHHHHHHH----hhcCCceEEEE
Q 017793          266 FDKTMSTALN----ATRPGGKVCLI  286 (366)
Q Consensus       266 ~~~~~~~~~~----~l~~~G~~v~~  286 (366)
                      .. .....++    .++++..++.+
T Consensus        67 ~~-~~~~~~~~l~~~~~~~~~vv~~   90 (279)
T 2f1k_A           67 IQ-LILPTLEKLIPHLSPTAIVTDV   90 (279)
T ss_dssp             HH-HHHHHHHHHGGGSCTTCEEEEC
T ss_pred             HH-HHHHHHHHHHhhCCCCCEEEEC
Confidence            54 3333333    34555555554

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=95.12  E-value=0.014  Score=53.01  Aligned_cols=104  Identities=14%  Similarity=0.158  Sum_probs=67.9

Q ss_pred             HHHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh----h--------HHHHHHHcCCceeeecCCCC
Q 017793          173 VHACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV----Q--------RLSIARNLGADETAKVSTDI  239 (366)
Q Consensus       173 ~~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~----~--------~~~~~~~lg~~~~~~~~~~~  239 (366)
                      +.+++..+.+ +..+|+|.|+|..|..+.+++..+|+++|+.+|++-    +        +..+++...      .....
T Consensus       176 l~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~------~~~~~  249 (398)
T 2a9f_A          176 FNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN------REFKS  249 (398)
T ss_dssp             HHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHS------CTTCC
T ss_pred             HHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccC------cccch
Confidence            3445544333 467999999999999999999999998899998752    1        122222211      00112


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      .++.+.+        .++|++|-+++....-+..++.|+++-.++.+..+.
T Consensus       250 ~~L~eav--------~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt  292 (398)
T 2a9f_A          250 GTLEDAL--------EGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI  292 (398)
T ss_dssp             CSCSHHH--------HTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred             hhHHHHh--------ccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC
Confidence            2333333        247999998875445667889999988887776554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.11  E-value=0.1  Score=44.32  Aligned_cols=81  Identities=21%  Similarity=0.270  Sum_probs=49.6

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc----CCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      +.++||.| +|.+|...+..+...|+ .|+.+++++++.+.+ +++    +... .+..+ ++..++.+.+.++.+. -+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ-FG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            46799998 69999998888888898 688888887765433 333    2211 11111 2222333333333322 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        80 ~id~li~~Ag~   90 (250)
T 2cfc_A           80 AIDVLVNNAGI   90 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999863

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=95.10  E-value=0.11  Score=43.84  Aligned_cols=80  Identities=23%  Similarity=0.243  Sum_probs=49.5

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-----HcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-----NLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-----~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+.     +.+....   .|. ++..+..+.+.++.+.. 
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~-   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-SKAESVEEFSKKVLERF-   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHCC-HHHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-CCHHHHHHHHHHHHHhc-
Confidence            56899998 68999998888888899 6888888877654332     2343321   122 22222222222232222 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++.+.|.
T Consensus        79 g~id~li~~Ag~   90 (235)
T 3l77_A           79 GDVDVVVANAGL   90 (235)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999874

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=95.09  E-value=0.098  Score=42.21  Aligned_cols=93  Identities=14%  Similarity=0.186  Sum_probs=63.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      ++++.+||-+|+|. |..+..+++. +. .+++++.+++..+.+++.... ..+.  .+..++.     +   ....+|+
T Consensus        44 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~--~d~~~~~-----~---~~~~~D~  110 (195)
T 3cgg_A           44 APRGAKILDAGCGQ-GRIGGYLSKQ-GH-DVLGTDLDPILIDYAKQDFPEARWVV--GDLSVDQ-----I---SETDFDL  110 (195)
T ss_dssp             SCTTCEEEEETCTT-THHHHHHHHT-TC-EEEEEESCHHHHHHHHHHCTTSEEEE--CCTTTSC-----C---CCCCEEE
T ss_pred             ccCCCeEEEECCCC-CHHHHHHHHC-CC-cEEEEcCCHHHHHHHHHhCCCCcEEE--cccccCC-----C---CCCceeE
Confidence            57889999999875 7778888876 76 899999999988888775322 2221  1111110     0   1357999


Q ss_pred             EEEcCCC---------hHHHHHHHHhhcCCceEEEE
Q 017793          260 SFDCVGF---------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       260 vld~~g~---------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |+.....         ...+..+.+.|+++|.++..
T Consensus       111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~  146 (195)
T 3cgg_A          111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIG  146 (195)
T ss_dssp             EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEE
Confidence            9875211         24567778899999998864

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.09  E-value=0.1  Score=44.82  Aligned_cols=82  Identities=27%  Similarity=0.352  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-C-HHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCceeeecC---CCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMGS-G-PIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADETAKVS---TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G~-g-~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~~~~~~---~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.|+ | ++|.+.++.+...|+ .|+.+++++++.+.+ +++   +...+..+.   ++..++.+.+.++.+..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4678999985 6 799998888888899 688888887765433 222   222222111   22233444444443322


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +.+|+++.+.|.
T Consensus       100 -g~id~li~~Ag~  111 (266)
T 3o38_A          100 -GRLDVLVNNAGL  111 (266)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCcEEEECCCc
Confidence             479999999884

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.08  E-value=0.072  Score=46.21  Aligned_cols=81  Identities=25%  Similarity=0.307  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---C---Cc-ee--eecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---G---AD-ET--AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g---~~-~~--~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   .   .. ..  .|. ++..++.+.+.++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-TTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc-CCHHHHHHHHHHHHH
Confidence            357899998 69999998888888899 688888887765533 333   2   11 11  122 222333333443333


Q ss_pred             hhCCCCcEEEEcCCC
Q 017793          252 AMGSGIDVSFDCVGF  266 (366)
Q Consensus       252 ~~~~~~d~vld~~g~  266 (366)
                      . -+++|+++++.|.
T Consensus        83 ~-~g~id~lv~~Ag~   96 (278)
T 1spx_A           83 K-FGKLDILVNNAGA   96 (278)
T ss_dssp             H-HSCCCEEEECCC-
T ss_pred             H-cCCCCEEEECCCC
Confidence            2 2479999999874

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.08  E-value=0.058  Score=48.66  Aligned_cols=92  Identities=17%  Similarity=0.228  Sum_probs=66.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|+ +|++.+++....+.++++|+..+       .+    +.++.    ...|+|+-
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~----l~ell----~~aDvV~l  226 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------ED----LNEML----PKCDVIVI  226 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SC----HHHHG----GGCSEEEE
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CC----HHHHH----hcCCEEEE
Confidence            47899999999999999999999999 68899887766677777776431       12    22222    35899998


Q ss_pred             cCCCh-H---H-HHHHHHhhcCCceEEEEcccC
Q 017793          263 CVGFD-K---T-MSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       263 ~~g~~-~---~-~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +++.. +   . -...+..|+++..++-++...
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~  259 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKGVLIVNNARGA  259 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCCCEEEECcCch
Confidence            87632 1   1 145668899999888776433

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.07  E-value=0.095  Score=44.22  Aligned_cols=74  Identities=18%  Similarity=0.285  Sum_probs=45.7

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC---CcchHHHHHHHHHhhC-CCCc
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD---IEDVDTDVGKIQNAMG-SGID  258 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~d  258 (366)
                      +.++||.| +|++|.+.++.+...|+ .|+.+++++++.+     +  ....+..+   .++..+.+.++.+..+ +++|
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id   74 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----D--SNILVDGNKNWTEQEQSILEQTASSLQGSQVD   74 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----S--EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----c--ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            56789998 69999998888888898 6777777765421     1  11111111   1222233333332222 5799


Q ss_pred             EEEEcCC
Q 017793          259 VSFDCVG  265 (366)
Q Consensus       259 ~vld~~g  265 (366)
                      +++++.|
T Consensus        75 ~lv~~Ag   81 (236)
T 1ooe_A           75 GVFCVAG   81 (236)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999988

>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}

Probab=95.06  E-value=0.2  Score=40.45  Aligned_cols=98  Identities=18%  Similarity=0.163  Sum_probs=60.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .++.+||=.|||. |..++.+++ .+...|++++.+++..+.+++    .+.+.+....   .+..+.....   ....+
T Consensus        43 ~~~~~vLDlgcG~-G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~~~---~~~~f  114 (189)
T 3p9n_A           43 LTGLAVLDLYAGS-GALGLEALS-RGAASVLFVESDQRSAAVIARNIEALGLSGATLRR---GAVAAVVAAG---TTSPV  114 (189)
T ss_dssp             CTTCEEEEETCTT-CHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEE---SCHHHHHHHC---CSSCC
T ss_pred             CCCCEEEEeCCCc-CHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEE---ccHHHHHhhc---cCCCc
Confidence            5788999898764 555555555 466689999999988777654    3443222211   2333322211   14679


Q ss_pred             cEEEEcCC--C-----hHHHHHHHH--hhcCCceEEEEc
Q 017793          258 DVSFDCVG--F-----DKTMSTALN--ATRPGGKVCLIG  287 (366)
Q Consensus       258 d~vld~~g--~-----~~~~~~~~~--~l~~~G~~v~~g  287 (366)
                      |+|+-...  .     ...+....+  .|+++|.++...
T Consensus       115 D~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~  153 (189)
T 3p9n_A          115 DLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVER  153 (189)
T ss_dssp             SEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred             cEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence            99987422  1     134555666  899999988754

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.05  E-value=0.16  Score=44.28  Aligned_cols=86  Identities=10%  Similarity=0.076  Sum_probs=56.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|.|+|+|.+|....+.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||-|+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~advvi~~v~   66 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-------SSPAEVC--------AACDITIAMLA   66 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-------SCHHHHH--------HHCSEEEECCS
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------HcCCEEEEEcC
Confidence            68899999999887777777787 68888999998887777765321       1222221        13688888888


Q ss_pred             ChHHHHHHH-------HhhcCCceEEEEc
Q 017793          266 FDKTMSTAL-------NATRPGGKVCLIG  287 (366)
Q Consensus       266 ~~~~~~~~~-------~~l~~~G~~v~~g  287 (366)
                      .+......+       ..+.++..++..+
T Consensus        67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~s   95 (287)
T 3pdu_A           67 DPAAAREVCFGANGVLEGIGGGRGYIDMS   95 (287)
T ss_dssp             SHHHHHHHHHSTTCGGGTCCTTCEEEECS
T ss_pred             CHHHHHHHHcCchhhhhcccCCCEEEECC
Confidence            764444443       3345555555544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=95.05  E-value=0.039  Score=46.22  Aligned_cols=87  Identities=14%  Similarity=0.139  Sum_probs=54.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++++             .|. ++.++..+.++++     +++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~-~~~~~v~~~~~~~-----g~id~lv   64 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDI-SDEKSVYHYFETI-----GAFDHLI   64 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCT-TCHHHHHHHHHHH-----CSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCC-CCHHHHHHHHHHh-----CCCCEEE
Confidence            356789998 68999998888877898 6777766544             122 1222222222221     4688888


Q ss_pred             EcCCCh-----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793          262 DCVGFD-----------K---------------TMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       262 d~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      .+.|..           +               ..+.+...+.++|+++.++..
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~  118 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM  118 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence            887732           0               222344455668899888743

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.05  E-value=0.25  Score=43.72  Aligned_cols=87  Identities=18%  Similarity=0.238  Sum_probs=58.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      .+|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .+..+.+        ..+|+|+.|+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~DvVi~av   94 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---G----RTPAEVV--------STCDITFACV   94 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---C----SCHHHHH--------HHCSEEEECC
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---c----CCHHHHH--------hcCCEEEEeC
Confidence            579999999999988887777888 5888888888877777766531   1    1222211        2478999998


Q ss_pred             CChHHHHHHHH-------hhcCCceEEEEc
Q 017793          265 GFDKTMSTALN-------ATRPGGKVCLIG  287 (366)
Q Consensus       265 g~~~~~~~~~~-------~l~~~G~~v~~g  287 (366)
                      ..+......+.       .+.++..++.++
T Consensus        95 ~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s  124 (316)
T 2uyy_A           95 SDPKAAKDLVLGPSGVLQGIRPGKCYVDMS  124 (316)
T ss_dssp             SSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             CCHHHHHHHHcCchhHhhcCCCCCEEEECC
Confidence            86545554442       345666565554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.04  E-value=0.11  Score=44.75  Aligned_cols=82  Identities=18%  Similarity=0.314  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHH-HHH---cCCc-eeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARA-FGAPRIIITDVDVQRLSI-ARN---LGAD-ETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~-~~~---lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      ++.++||.| +|.+|...++.+.. .|+ .|+.++++.++.+. +++   .+.. ..+..+ ++..++...+.++.+.. 
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            467899998 69999888877777 898 67777777665432 222   2322 112111 22233333343333322 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|++|.+.|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.04  E-value=0.14  Score=45.32  Aligned_cols=49  Identities=12%  Similarity=0.188  Sum_probs=37.3

Q ss_pred             HHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC---hhHHH
Q 017793          174 HACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---VQRLS  222 (366)
Q Consensus       174 ~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~---~~~~~  222 (366)
                      .+++...+. .+.++||+|+|++|.+++..+...|++.|.++.++   .++.+
T Consensus       137 ~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~  189 (312)
T 3t4e_A          137 RAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAV  189 (312)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHH
T ss_pred             HHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHH
Confidence            344443333 57899999999999999988888999778888888   55544

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.03  E-value=0.11  Score=44.71  Aligned_cols=82  Identities=18%  Similarity=0.239  Sum_probs=48.5

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHH-HHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDV---QRLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +  |++|.+.++.+...|+ .|+.+++++   +..+.+ .+.+....+..+ ++..++.+.+.++.+ .-
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-VW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-TC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence            367899998 5  7999998888888899 677777765   222222 223322222211 222233333333332 23


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        86 g~iD~lv~~Ag~   97 (265)
T 1qsg_A           86 PKFDGFVHSIGF   97 (265)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=95.01  E-value=0.062  Score=44.43  Aligned_cols=100  Identities=19%  Similarity=0.254  Sum_probs=65.8

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +....+++ +||-+|+|. |..+..+++..+. .+++++.+++..+.+++.    +.. .+.....+..++.     +  
T Consensus        38 ~~~~~~~~-~vLdiG~G~-G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~--  107 (219)
T 3dlc_A           38 NRFGITAG-TCIDIGSGP-GALSIALAKQSDF-SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-----I--  107 (219)
T ss_dssp             HHHCCCEE-EEEEETCTT-SHHHHHHHHHSEE-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-----S--
T ss_pred             HhcCCCCC-EEEEECCCC-CHHHHHHHHcCCC-eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-----C--
Confidence            44555666 899999876 7888888888565 899999999887776653    332 1111111111110     0  


Q ss_pred             hhCCCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                       ....+|+|+....-      ...+..+.+.|+++|.++...
T Consensus       108 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  148 (219)
T 3dlc_A          108 -EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG  148 (219)
T ss_dssp             -CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence             13579999875421      346788889999999988764

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.00  E-value=0.3  Score=43.11  Aligned_cols=89  Identities=16%  Similarity=0.144  Sum_probs=60.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      ..+|.|+|.|.+|....+.+...|. .|++.++++++.+.+.+.|+...       .+..+.+        ...|+||-|
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~e~~--------~~aDvVi~~   72 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC-------ESVKAAL--------SASPATIFV   72 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC-------SSHHHHH--------HHSSEEEEC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec-------CCHHHHH--------hcCCEEEEE
Confidence            4579999999999988888888898 68888999998888777775321       1222222        137899999


Q ss_pred             CCChHHHHHHH-----HhhcCCceEEEEcc
Q 017793          264 VGFDKTMSTAL-----NATRPGGKVCLIGL  288 (366)
Q Consensus       264 ~g~~~~~~~~~-----~~l~~~G~~v~~g~  288 (366)
                      +..+......+     ..+.++..++..+.
T Consensus        73 vp~~~~~~~v~~~~~l~~~~~g~ivid~st  102 (306)
T 3l6d_A           73 LLDNHATHEVLGMPGVARALAHRTIVDYTT  102 (306)
T ss_dssp             CSSHHHHHHHHTSTTHHHHTTTCEEEECCC
T ss_pred             eCCHHHHHHHhcccchhhccCCCEEEECCC
Confidence            98765444433     23455666665543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=94.99  E-value=0.15  Score=44.11  Aligned_cols=81  Identities=12%  Similarity=0.062  Sum_probs=49.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH-HHc----CCce-e--eecCCCC----cchHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSIA-RNL----GADE-T--AKVSTDI----EDVDTDVGK  248 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~-~~l----g~~~-~--~~~~~~~----~~~~~~~~~  248 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++ ++++.+.+ +++    +... .  .|. ++.    ..+.+.+.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDL-SLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC-SSSTTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccC-CCccccHHHHHHHHHH
Confidence            357899998 68999998888888899 6777777 76654432 222    4322 1  122 222    233333333


Q ss_pred             HHHhhCCCCcEEEEcCCC
Q 017793          249 IQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~  266 (366)
                      +.+. -+++|+++++.|.
T Consensus        88 ~~~~-~g~id~lv~nAg~  104 (276)
T 1mxh_A           88 SFRA-FGRCDVLVNNASA  104 (276)
T ss_dssp             HHHH-HSCCCEEEECCCC
T ss_pred             HHHh-cCCCCEEEECCCC
Confidence            3322 2479999999873

>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=94.99  E-value=0.061  Score=44.09  Aligned_cols=92  Identities=15%  Similarity=0.102  Sum_probs=62.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +.+||-+|+|. |..+..+++. |. .+++++.+++..+.+++......+ ...   ++..    +. ...+.+|+|+..
T Consensus        42 ~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~~~~~~~-~~~---d~~~----~~-~~~~~fD~v~~~  109 (203)
T 3h2b_A           42 DGVILDVGSGT-GRWTGHLASL-GH-QIEGLEPATRLVELARQTHPSVTF-HHG---TITD----LS-DSPKRWAGLLAW  109 (203)
T ss_dssp             CSCEEEETCTT-CHHHHHHHHT-TC-CEEEECCCHHHHHHHHHHCTTSEE-ECC---CGGG----GG-GSCCCEEEEEEE
T ss_pred             CCeEEEecCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHHhCCCCeE-EeC---cccc----cc-cCCCCeEEEEeh
Confidence            78899999876 7777778776 77 799999999988888775322111 111   2211    10 124679999874


Q ss_pred             C--------CChHHHHHHHHhhcCCceEEEEc
Q 017793          264 V--------GFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       264 ~--------g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .        .-...+..+.+.|+++|.++...
T Consensus       110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~  141 (203)
T 3h2b_A          110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSF  141 (203)
T ss_dssp             SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            3        11346778889999999988754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=94.99  E-value=0.15  Score=44.37  Aligned_cols=82  Identities=16%  Similarity=0.225  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHCCCCeEEEEcCChh---HHHHH-HHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +  |++|.+.++.+...|+ .|+.++++++   ..+.+ .+.+....+..+ ++..++.+.+.++.+. -
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN-W   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            467899998 5  7999998888888899 6777777664   22222 223321222111 2223333334333332 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        98 g~iD~lv~~Ag~  109 (285)
T 2p91_A           98 GSLDIIVHSIAY  109 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=94.99  E-value=0.075  Score=45.35  Aligned_cols=81  Identities=23%  Similarity=0.225  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC-hhHHHH-HHH---cCCce-ee--ecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD-VQRLSI-ARN---LGADE-TA--KVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~-~~~---lg~~~-~~--~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+.++++ +++.+. .++   .+... .+  |. ++.+++.+.+.++.+. 
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-   82 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADL-ATSEACQQLVDEFVAK-   82 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCT-TSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCC-CCHHHHHHHHHHHHHH-
Confidence            357899998 69999998888888899 67777776 554432 222   24321 11  22 2222333334333332 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|++|.+.|.
T Consensus        83 ~g~id~vi~~Ag~   95 (258)
T 3afn_B           83 FGGIDVLINNAGG   95 (258)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999884

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=94.98  E-value=0.055  Score=46.01  Aligned_cols=76  Identities=12%  Similarity=0.023  Sum_probs=50.1

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-c--CChhHHHHH-HHc-CCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-D--VDVQRLSIA-RNL-GADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~--~~~~~~~~~-~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +.++||.| +|++|.+.++.+...|+ +|+.+ +  +++++.+.+ +++ +.+ +.    +..+....+.++.+. -+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~----~~~~v~~~~~~~~~~-~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGTI-AL----AEQKPERLVDATLQH-GEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-EC----CCCCGGGHHHHHGGG-SSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-cc----CHHHHHHHHHHHHHH-cCCC
Confidence            35789998 68999998888888899 68887 5  777766543 444 322 21    234444455444332 3479


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        74 D~lv~~Ag~   82 (244)
T 1zmo_A           74 DTIVSNDYI   82 (244)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999873

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=94.98  E-value=0.13  Score=43.81  Aligned_cols=82  Identities=15%  Similarity=0.255  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+++++++++.+.+    ++.+... .+..+ ++..++.+.+.++.+. .+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK-LG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            467899998 69999998888888898 688888887665432    2234322 11111 1222333333333222 24


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++.+.|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=94.97  E-value=0.081  Score=44.17  Aligned_cols=95  Identities=16%  Similarity=0.276  Sum_probs=56.5

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      .+|||.| +|.+|...++.+...|. .|+++++++++.+.+   . ..+..+..+-.+. +.+.+..    .++|+||.+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---~-~~~~~~~~Dl~d~-~~~~~~~----~~~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIE---N-EHLKVKKADVSSL-DEVCEVC----KGADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCC---C-TTEEEECCCTTCH-HHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhc---c-CceEEEEecCCCH-HHHHHHh----cCCCEEEEe
Confidence            5799998 69999999999988897 788888887654321   1 1111111222222 2233332    369999999


Q ss_pred             CCChH-----------HHHHHHHhhcCC--ceEEEEccc
Q 017793          264 VGFDK-----------TMSTALNATRPG--GKVCLIGLA  289 (366)
Q Consensus       264 ~g~~~-----------~~~~~~~~l~~~--G~~v~~g~~  289 (366)
                      .|...           ....+++.+...  .+++.++..
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            87641           122334444333  478887643

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=94.97  E-value=0.16  Score=43.97  Aligned_cols=82  Identities=15%  Similarity=0.193  Sum_probs=49.0

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHCCCCeEEEEcCChh---HHHHH-HHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +  |++|.+.++.+...|+ .|+.++++++   ..+.+ ++.+....+..+ ++..+..+.+.++.+. -
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD-L   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            367899998 5  7999998888888898 6777777664   33322 223421222111 2223333333333322 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        83 g~id~lv~nAg~   94 (275)
T 2pd4_A           83 GSLDFIVHSVAF   94 (275)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=94.97  E-value=0.17  Score=43.99  Aligned_cols=81  Identities=14%  Similarity=0.200  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|.+|...++.+...|+ .|+++++++++.+.+ ++   .+... .  .|. ++.+.+.+.+.++.+ ..
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-~d~~~v~~~~~~~~~-~~  119 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-SKKEEISEVINKILT-EH  119 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-TCHHHHHHHHHHHHH-HC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC-CCHHHHHHHHHHHHH-hc
Confidence            367899998 69999998888887898 677777776654432 22   24332 1  122 222333333333332 23


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|++|.+.|.
T Consensus       120 ~~id~li~~Ag~  131 (285)
T 2c07_A          120 KNVDILVNNAGI  131 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.96  E-value=0.19  Score=43.00  Aligned_cols=34  Identities=26%  Similarity=0.508  Sum_probs=29.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      +.+|+|.|+|++|..++..+...|+..+..++.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999998889999888888654

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=94.96  E-value=0.022  Score=45.33  Aligned_cols=95  Identities=15%  Similarity=0.189  Sum_probs=66.0

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ..++++.+||-+|+|. |..+..+++.. . .+++++.+++..+.+++... .+.....   +.        ......+|
T Consensus        13 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~-~v~~~~~---d~--------~~~~~~~D   77 (170)
T 3i9f_A           13 IFEGKKGVIVDYGCGN-GFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFD-SVITLSD---PK--------EIPDNSVD   77 (170)
T ss_dssp             HHSSCCEEEEEETCTT-CTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCT-TSEEESS---GG--------GSCTTCEE
T ss_pred             cCcCCCCeEEEECCCC-CHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCC-CcEEEeC---CC--------CCCCCceE
Confidence            3467889999999876 77888888865 3 89999999998888877622 1111111   10        11245799


Q ss_pred             EEEEcCCC------hHHHHHHHHhhcCCceEEEEcc
Q 017793          259 VSFDCVGF------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       259 ~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +|+....-      ...+..+.+.|+++|+++....
T Consensus        78 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~  113 (170)
T 3i9f_A           78 FILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDW  113 (170)
T ss_dssp             EEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence            99864322      2467888899999999988753

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=94.95  E-value=0.092  Score=44.96  Aligned_cols=82  Identities=18%  Similarity=0.193  Sum_probs=48.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +|.+|.+.++.+...|+ .|+.+++ ++++.+.+    ++.+... .+..+ ++..++.+.+.++.+. -
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE-F   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            367899998 69999998888888898 6777777 66554322    2234321 11111 1222333333333322 2


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|++|.+.|.
T Consensus        84 g~id~li~~Ag~   95 (261)
T 1gee_A           84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=94.95  E-value=0.21  Score=43.32  Aligned_cols=81  Identities=22%  Similarity=0.359  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC------------hhHHH----HHHHcCCcee---eecCCCCcch
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRLS----IARNLGADET---AKVSTDIEDV  242 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~~---~~~~~~~~~~  242 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.++++            .++.+    .+++.+....   .|. ++..+.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v   86 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV-KDRAAL   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCC-CCHHHH
Confidence            468899998 68999998888888899 67777775            33222    2334443321   122 222334


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      .+.++++.+.. +++|+++++.|.
T Consensus        87 ~~~~~~~~~~~-g~id~lv~nAg~  109 (281)
T 3s55_A           87 ESFVAEAEDTL-GGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHHH-TCCCEEEECCCC
T ss_pred             HHHHHHHHHhc-CCCCEEEECCCC
Confidence            44444443322 479999999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=94.95  E-value=0.16  Score=44.05  Aligned_cols=80  Identities=20%  Similarity=0.290  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHH----cCCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN----LGADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~----lg~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.++++.++.+. +++    .+... .  .|. ++..+..+.+.++.+..
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-RAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            468899998 68999998888888899 78888888765432 222    24322 1  122 22233444444443322


Q ss_pred             CCCCcEEEEcCC
Q 017793          254 GSGIDVSFDCVG  265 (366)
Q Consensus       254 ~~~~d~vld~~g  265 (366)
                       +++|+++++.|
T Consensus       104 -g~id~lv~nAg  114 (277)
T 4fc7_A          104 -GRIDILINCAA  114 (277)
T ss_dssp             -SCCCEEEECCC
T ss_pred             -CCCCEEEECCc
Confidence             47999999998

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=94.95  E-value=0.091  Score=44.70  Aligned_cols=103  Identities=15%  Similarity=0.127  Sum_probs=64.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHH----HHHHHcCCc-eeeecCCCCcchHHHHHHHHHhh-
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRL----SIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAM-  253 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~----~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~-  253 (366)
                      ..++.+||-+|+|. |..++.+|+..+ ..+|++++.+++..    +.+++.|.. .+-...   .+..+.+..+...+ 
T Consensus        58 ~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~~~~~~~  133 (242)
T 3r3h_A           58 LTRAKKVLELGTFT-GYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRL---GPALDTLHSLLNEGG  133 (242)
T ss_dssp             HHTCSEEEEEESCC-SHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHHHC
T ss_pred             hcCcCEEEEeeCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHhhccC
Confidence            34568999999876 778888998763 33899999988643    344455653 221111   23333333332111 


Q ss_pred             CCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...||+|+-.....   ..+..+.+.|++||.++.-.
T Consensus       134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          134 EHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             SSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence            36799997544322   34677889999999988743

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=94.94  E-value=0.16  Score=45.76  Aligned_cols=91  Identities=19%  Similarity=0.300  Sum_probs=62.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|+ +|++.+++.++ ...+++|+..+       .++.    ++.    ...|+|+-
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~-------~~l~----ell----~~aDvV~l  229 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRV-------STLQ----DLL----FHSDCVTL  229 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEEC-------SSHH----HHH----HHCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhHhhcCCeec-------CCHH----HHH----hcCCEEEE
Confidence            46789999999999999999999999 78888776544 23455675321       1222    222    24799988


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEcccC
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~~  290 (366)
                      ++....    .+ ...+..|+++..++.++...
T Consensus       230 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~  262 (347)
T 1mx3_A          230 HCGLNEHNHHLINDFTVKQMRQGAFLVNTARGG  262 (347)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTT
T ss_pred             cCCCCHHHHHHhHHHHHhcCCCCCEEEECCCCh
Confidence            876421    12 45667888988888776544

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=94.93  E-value=0.12  Score=44.13  Aligned_cols=79  Identities=15%  Similarity=0.285  Sum_probs=48.4

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH---HcCCcee-e--ecCCCCcchHHHHHHHHHhhCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR---NLGADET-A--KVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~---~lg~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +.++||.| +|++|.+.++.+...|+ .|+.++++++ .+.++   +.+.... +  |. ++..++.+.+.++.+. -++
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~-~g~   79 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHGVKAVHHPADL-SDVAQIEALFALAERE-FGG   79 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTSCCEEEECCCT-TSHHHHHHHHHHHHHH-HSS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcCCceEEEeCCC-CCHHHHHHHHHHHHHH-cCC
Confidence            57899998 69999998888888899 6777777655 22223   3343221 1  21 2223333334333322 247


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++++.|.
T Consensus        80 id~lv~~Ag~   89 (255)
T 2q2v_A           80 VDILVNNAGI   89 (255)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=94.93  E-value=0.073  Score=44.28  Aligned_cols=94  Identities=15%  Similarity=0.213  Sum_probs=56.4

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|||.| +|.+|...++.+...|. .|+++++++++.+.+  .+. ..+.  .+-.+..+.+.+.    -.++|+||.+.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~--~D~~d~~~~~~~~----~~~~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVH--FDVDWTPEEMAKQ----LHGMDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEE--CCTTSCHHHHHTT----TTTCSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEE--ecccCCHHHHHHH----HcCCCEEEECC
Confidence            689998 69999999998888898 788888887654322  111 1222  1212212233332    24799999999


Q ss_pred             CChH---------HHHHHHHhhcC--CceEEEEccc
Q 017793          265 GFDK---------TMSTALNATRP--GGKVCLIGLA  289 (366)
Q Consensus       265 g~~~---------~~~~~~~~l~~--~G~~v~~g~~  289 (366)
                      |...         .....++.+..  .++++.++..
T Consensus        72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  107 (219)
T 3dqp_A           72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI  107 (219)
T ss_dssp             CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence            8532         12233344332  2588887754

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=94.93  E-value=0.13  Score=46.31  Aligned_cols=90  Identities=18%  Similarity=0.242  Sum_probs=61.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .|.+|.|+|.|.+|...++.++ ..|. +|++.+++.++.+.+.++|....       .++.+.+        ...|+|+
T Consensus       162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~aDvVi  225 (348)
T 2w2k_A          162 RGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV-------DSLEELA--------RRSDCVS  225 (348)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHH--------HHCSEEE
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe-------CCHHHHh--------ccCCEEE
Confidence            4789999999999999999999 8998 78899888766666666665321       1222221        2478998


Q ss_pred             EcCCChH----HH-HHHHHhhcCCceEEEEcc
Q 017793          262 DCVGFDK----TM-STALNATRPGGKVCLIGL  288 (366)
Q Consensus       262 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~  288 (366)
                      .++....    .+ ...+..|+++..++.++.
T Consensus       226 l~vp~~~~t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          226 VSVPYMKLTHHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             ECCCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             EeCCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence            8876532    11 245567888777766543

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=94.91  E-value=0.036  Score=47.10  Aligned_cols=99  Identities=13%  Similarity=0.189  Sum_probs=63.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH--hh
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN--AM  253 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~--~~  253 (366)
                      .++++.+||=+|||. |..++.+++......|++++.+++..+.+++    ++...+.....   +..    ++..  ..
T Consensus        67 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~----~~~~~~~~  138 (240)
T 1xdz_A           67 DFNQVNTICDVGAGA-GFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHD---RAE----TFGQRKDV  138 (240)
T ss_dssp             CGGGCCEEEEECSSS-CTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEES---CHH----HHTTCTTT
T ss_pred             ccCCCCEEEEecCCC-CHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEec---cHH----Hhcccccc
Confidence            346788999999874 7777777775433489999999988777754    45433222212   221    1110  01


Q ss_pred             CCCCcEEEEcC-CC-hHHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCV-GF-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~-g~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...||+|+... .. ...+..+.+.|+++|.++..
T Consensus       139 ~~~fD~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~  173 (240)
T 1xdz_A          139 RESYDIVTARAVARLSVLSELCLPLVKKNGLFVAL  173 (240)
T ss_dssp             TTCEEEEEEECCSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCCccEEEEeccCCHHHHHHHHHHhcCCCCEEEEE
Confidence            35799998543 22 23566677889999999876

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=94.91  E-value=0.14  Score=43.86  Aligned_cols=81  Identities=21%  Similarity=0.233  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-HHH-HHHc----CCce-ee--ecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSI-ARNL----GADE-TA--KVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~-~~~l----g~~~-~~--~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++ .+. .+++    +... .+  |. ++..++.+.+.++.+.
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-SKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-CCHHHHHHHHHHHHHh
Confidence            367899998 68999998888888899 67777777665 432 2222    4322 11  22 2222333334433332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+++|+++++.|.
T Consensus        81 -~g~iD~lv~~Ag~   93 (260)
T 1x1t_A           81 -MGRIDILVNNAGI   93 (260)
T ss_dssp             -HSCCSEEEECCCC
T ss_pred             -cCCCCEEEECCCC
Confidence             2479999999873

>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A

Probab=94.91  E-value=0.14  Score=42.38  Aligned_cols=98  Identities=14%  Similarity=0.092  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-----eeeecCCCCcchHHHHHHHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-----ETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-----~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ...++.+||-+|||. |..+..+++..+...+++++.+++..+.+++.    +..     .+.....+.....       
T Consensus        26 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------   97 (217)
T 3jwh_A           26 KQSNARRVIDLGCGQ-GNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD-------   97 (217)
T ss_dssp             HHTTCCEEEEETCTT-CHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC-------
T ss_pred             HhcCCCEEEEeCCCC-CHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc-------
Confidence            345778999999876 77888888865545899999999988877653    111     1111111111100       


Q ss_pred             HhhCCCCcEEEEcC-----CC---hHHHHHHHHhhcCCceEEEE
Q 017793          251 NAMGSGIDVSFDCV-----GF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       251 ~~~~~~~d~vld~~-----g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                       .....+|+|+...     ..   ...+..+.+.|+++|.++..
T Consensus        98 -~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~  140 (217)
T 3jwh_A           98 -KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT  140 (217)
T ss_dssp             -GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred             -ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence             0135799998533     21   24567788889999977654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=94.91  E-value=0.1  Score=45.00  Aligned_cols=82  Identities=23%  Similarity=0.413  Sum_probs=50.5

Q ss_pred             CCCEEEEEC---CCHHHHHHHHHHHHCCCCeEEEEcCChhH--HHHHHHcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG---SGPIGLVTLLAARAFGAPRIIITDVDVQR--LSIARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G---~g~vG~~ai~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.|   +|++|.+.++.+...|+ .|+.+++++++  .+..++++... .  .|. ++.+++.+.+.++.+..+
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDV-QNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCT-TCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccC-CCHHHHHHHHHHHHHHhC
Confidence            467899998   47999998888888899 67777777654  23334444321 1  222 222334444444433223


Q ss_pred             --CCCcEEEEcCCC
Q 017793          255 --SGIDVSFDCVGF  266 (366)
Q Consensus       255 --~~~d~vld~~g~  266 (366)
                        .++|+++++.|.
T Consensus        84 ~~~~iD~lv~nAg~   97 (269)
T 2h7i_A           84 AGNKLDGVVHSIGF   97 (269)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             CCCCceEEEECCcc
Confidence              279999999873

>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*

Probab=94.90  E-value=0.057  Score=47.05  Aligned_cols=96  Identities=17%  Similarity=0.166  Sum_probs=63.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++++++||=.|||. |..++.+++. |...|++++.+++..+.+++    .+.+. +.....+..++..         ..
T Consensus       123 ~~~~~~VLDlgcG~-G~~~~~la~~-~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~---------~~  191 (278)
T 2frn_A          123 AKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---------EN  191 (278)
T ss_dssp             CCTTCEEEETTCTT-TTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---------CS
T ss_pred             CCCCCEEEEecccC-CHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc---------cC
Confidence            57899999888765 6677777776 44379999999988877765    34432 2111222122111         35


Q ss_pred             CCcEEEEcCCC--hHHHHHHHHhhcCCceEEEEc
Q 017793          256 GIDVSFDCVGF--DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       256 ~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+|+|+-....  ...+..+.+.|+++|.++...
T Consensus       192 ~fD~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~  225 (278)
T 2frn_A          192 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  225 (278)
T ss_dssp             CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CccEEEECCchhHHHHHHHHHHHCCCCeEEEEEE
Confidence            79988764432  247788899999999998764

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=94.88  E-value=0.15  Score=45.52  Aligned_cols=132  Identities=11%  Similarity=0.096  Sum_probs=75.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      -+|.|+|+|.+|...+..++.. +++.+.+.++++++.+ +++++|.....      .++.    ++.+  ...+|+|+.
T Consensus         6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~------~~~~----~ll~--~~~~D~V~i   73 (329)
T 3evn_A            6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAY------DKLE----DMLA--DESIDVIYV   73 (329)
T ss_dssp             EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEE------SCHH----HHHT--CTTCCEEEE
T ss_pred             eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCccc------CCHH----HHhc--CCCCCEEEE
Confidence            3689999999987666555544 5544445577776654 45556654322      1222    2322  347999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      |+....+...+..+|..|-. +++.-+.........    ..-.+++.+.-..  .+...++.+.+++++|.+
T Consensus        74 ~tp~~~h~~~~~~al~aGk~-Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~g~i  145 (329)
T 3evn_A           74 ATINQDHYKVAKAALLAGKH-VLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEI  145 (329)
T ss_dssp             CSCGGGHHHHHHHHHHTTCE-EEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHHTTTT
T ss_pred             CCCcHHHHHHHHHHHHCCCe-EEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHhCCCC
Confidence            99988888888888877655 444332211111111    1122333333222  225567888889998887

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=94.88  E-value=0.23  Score=42.78  Aligned_cols=81  Identities=14%  Similarity=0.219  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---C-CceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---G-ADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.+++++++.+.+ +++   + ...+..+..+-.+. +.+.++.+. -++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~-~g~   85 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE-QGCQDVIEK-YPK   85 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH-HHHHHHHHH-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH-HHHHHHHHh-cCC
Confidence            467899998 68999998888888899 688888887654432 222   2 12221111221221 223333322 357


Q ss_pred             CcEEEEcCCC
Q 017793          257 IDVSFDCVGF  266 (366)
Q Consensus       257 ~d~vld~~g~  266 (366)
                      +|+++++.|.
T Consensus        86 id~lv~nAg~   95 (267)
T 3t4x_A           86 VDILINNLGI   95 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=94.88  E-value=0.14  Score=43.92  Aligned_cols=101  Identities=16%  Similarity=0.274  Sum_probs=66.0

Q ss_pred             CCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHHh
Q 017793          179 ANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       179 ~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ..++ ++++||=.|||. |..++.+++.... .|++++.+++..+.+++    .+.. .+..+..+..++..   .+   
T Consensus        44 ~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~---~~---  115 (259)
T 3lpm_A           44 SYLPIRKGKIIDLCSGN-GIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD---LI---  115 (259)
T ss_dssp             CCCCSSCCEEEETTCTT-THHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG---TS---
T ss_pred             hcCCCCCCEEEEcCCch-hHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh---hh---
Confidence            5677 899999998775 7777777776544 89999999988877755    3433 12222222222211   01   


Q ss_pred             hCCCCcEEEEcCCC--------------------------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGF--------------------------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~--------------------------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....||+|+...+-                          ...+..+.+.|+++|+++.+-
T Consensus       116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  176 (259)
T 3lpm_A          116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH  176 (259)
T ss_dssp             CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence            14679999974220                          135677888999999998863

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=94.87  E-value=0.079  Score=46.05  Aligned_cols=78  Identities=18%  Similarity=0.257  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCcee-eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .++++.... +..+ ++..++.+.++++ . ..+++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~-~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-N-QLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-T-TSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-H-HhCCCC
Confidence            467899998 68999998888888899 68888888877654 345554321 1111 2223333333333 2 234789


Q ss_pred             EEEEc
Q 017793          259 VSFDC  263 (366)
Q Consensus       259 ~vld~  263 (366)
                      +++.+
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99988

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=94.87  E-value=0.43  Score=42.77  Aligned_cols=90  Identities=17%  Similarity=0.165  Sum_probs=60.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      .+|.|+|.|.+|......++..|. .|++.++++++.+.+.++|+...       .+..+.+.+.    ....|+||-|+
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~-------~~~~e~~~~a----~~~aDlVilav   76 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS-------ADLEATLQRA----AAEDALIVLAV   76 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE-------SCHHHHHHHH----HHTTCEEEECS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee-------CCHHHHHHhc----ccCCCEEEEeC
Confidence            579999999999998888888897 68999999999998888887421       1222223221    12478888888


Q ss_pred             CChHHHHHHHH---hhcCCceEEEEc
Q 017793          265 GFDKTMSTALN---ATRPGGKVCLIG  287 (366)
Q Consensus       265 g~~~~~~~~~~---~l~~~G~~v~~g  287 (366)
                      ... .....++   .++++..++.++
T Consensus        77 P~~-~~~~vl~~l~~~~~~~iv~Dv~  101 (341)
T 3ktd_A           77 PMT-AIDSLLDAVHTHAPNNGFTDVV  101 (341)
T ss_dssp             CHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred             CHH-HHHHHHHHHHccCCCCEEEEcC
Confidence            843 3333222   235555555554

>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42

Probab=94.86  E-value=0.038  Score=46.86  Aligned_cols=96  Identities=13%  Similarity=0.092  Sum_probs=62.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc----eeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD----ETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +++.+||-+|||. |..+..+++..+. .+++++.+++..+.+++....    .+.....   ++..    +. ...+.|
T Consensus        78 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~~----~~-~~~~~f  147 (241)
T 2ex4_A           78 TGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC---GLQD----FT-PEPDSY  147 (241)
T ss_dssp             CCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC---CGGG----CC-CCSSCE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHhhhcCCceEEEEEc---Chhh----cC-CCCCCE
Confidence            4688999999876 7788888876544 899999999988888764322    1111111   1111    00 013469


Q ss_pred             cEEEEcCC-----C---hHHHHHHHHhhcCCceEEEEc
Q 017793          258 DVSFDCVG-----F---DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       258 d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      |+|+....     .   ...+..+.+.|+++|+++...
T Consensus       148 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  185 (241)
T 2ex4_A          148 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  185 (241)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence            99986532     1   145777888999999998754

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=94.85  E-value=0.15  Score=46.46  Aligned_cols=131  Identities=18%  Similarity=0.229  Sum_probs=79.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHC--------CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAF--------GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~--------g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +|.|+|+|.+|..-+...+..        +++.+.+++.++++.+ +++++|...+..      ++.    ++.+  ...
T Consensus         8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~------d~~----~ll~--~~~   75 (390)
T 4h3v_A            8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTET------DWR----TLLE--RDD   75 (390)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEES------CHH----HHTT--CTT
T ss_pred             cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccC------CHH----HHhc--CCC
Confidence            688999999887644443322        2334556677777655 567788765432      332    2322  457


Q ss_pred             CcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHh-------hhcCcEEE-Ee-eccCCChHHHHHHHHCC
Q 017793          257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA-------AAREVDVI-GI-FRYRSTWPLCIEFLRSG  327 (366)
Q Consensus       257 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-------~~~~~~~~-~~-~~~~~~~~~~~~~l~~g  327 (366)
                      +|+|+-|+....+.+.+..+|..|=. +++.-+.....-....+       -..++.+. +. ..+...++.+.+++++|
T Consensus        76 iDaV~I~tP~~~H~~~~~~al~aGkh-Vl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i~~g  154 (390)
T 4h3v_A           76 VQLVDVCTPGDSHAEIAIAALEAGKH-VLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLVADG  154 (390)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHTT
T ss_pred             CCEEEEeCChHHHHHHHHHHHHcCCC-ceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHHHcC
Confidence            99999999988899999888887754 45543322111111111       11233333 32 23366788999999999


Q ss_pred             CC
Q 017793          328 KI  329 (366)
Q Consensus       328 ~~  329 (366)
                      .+
T Consensus       155 ~i  156 (390)
T 4h3v_A          155 KI  156 (390)
T ss_dssp             SS
T ss_pred             CC
Confidence            88

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=94.85  E-value=0.066  Score=45.71  Aligned_cols=38  Identities=18%  Similarity=0.121  Sum_probs=28.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEE-EcCChhHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIII-TDVDVQRL  221 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~-v~~~~~~~  221 (366)
                      .+.++||.| ++++|.+.++.+...|+ .|+. ..+++++.
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~   45 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA   45 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHH
Confidence            467899998 68999998888888899 4554 45555543

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=94.84  E-value=0.22  Score=45.08  Aligned_cols=132  Identities=11%  Similarity=0.050  Sum_probs=77.6

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGL-VTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~-~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      -+|.|+|+|.++. .....++.-+++.+.+++.++++.+ ++++++.....      .++.    ++.+  ...+|+|+.
T Consensus        27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~------~~~~----~ll~--~~~vD~V~I   94 (361)
T 3u3x_A           27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRI------ATAE----EILE--DENIGLIVS   94 (361)
T ss_dssp             CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEE------SCHH----HHHT--CTTCCEEEE
T ss_pred             cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCccc------CCHH----HHhc--CCCCCEEEE
Confidence            5799999887774 3344445678865667778887754 56677743322      1332    2332  356999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEee--cc-CCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIF--RY-RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~-~~~~~~~~~~l~~g~~  329 (366)
                      |.+...+...+..+|..|= -+++.-+.....-...    ..-..++.+.-..  .+ ...++.+.+++++|.+
T Consensus        95 ~tp~~~H~~~~~~al~aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~k~~i~~g~i  167 (361)
T 3u3x_A           95 AAVSSERAELAIRAMQHGK-DVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELVAAGAI  167 (361)
T ss_dssp             CCCHHHHHHHHHHHHHTTC-EEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHCCC-eEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCHHHHHHHHHHHcCCC
Confidence            9998888888888887664 4555432211111111    1112233333222  23 2567888888888887

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=94.83  E-value=0.1  Score=45.06  Aligned_cols=78  Identities=18%  Similarity=0.167  Sum_probs=47.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.++++++.. ..+.+  ....|. ++.++....+.+..+. -+++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~--~~~~Dv-~~~~~v~~~~~~~~~~-~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEEL--FVEADL-TTKEGCAIVAEATRQR-LGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTT--EEECCT-TSHHHHHHHHHHHHHH-TSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEE--EEEcCC-CCHHHHHHHHHHHHHH-cCCCCEEE
Confidence            578899998 68999998888888999 677776654321 00111  011222 2223344444443332 35799999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      ++.|.
T Consensus        84 nnAG~   88 (261)
T 4h15_A           84 HMLGG   88 (261)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98763

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=94.83  E-value=0.1  Score=44.93  Aligned_cols=76  Identities=20%  Similarity=0.247  Sum_probs=47.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++     .-.... ..|. ++..++.+.+.++.+.. +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~-g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDV-TNPDQVKASIDHIFKEY-GSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCT-TCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecC-CCHHHHHHHHHHHHHHc-CCCCEE
Confidence            367899998 69999998888888899 67777776554     111111 1122 22233333444433322 479999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +++.|.
T Consensus        79 v~~Ag~   84 (264)
T 2dtx_A           79 VNNAGI   84 (264)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=94.83  E-value=0.16  Score=43.19  Aligned_cols=81  Identities=21%  Similarity=0.366  Sum_probs=49.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCce-ee--ecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSIA----RNLGADE-TA--KVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++ ++++.+.+    ++.+... .+  |. ++..++.+.+.++.+..
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADV-ANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            367899998 69999998888888899 6776666 66654332    2234332 11  22 22233334444333322


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +++|+++++.|.
T Consensus        81 -g~id~lv~nAg~   92 (246)
T 2uvd_A           81 -GQVDILVNNAGV   92 (246)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999874

>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}

Probab=94.80  E-value=0.26  Score=40.51  Aligned_cols=101  Identities=16%  Similarity=0.001  Sum_probs=59.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cC---CceeeecCCCCcc------------
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LG---ADETAKVSTDIED------------  241 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg---~~~~~~~~~~~~~------------  241 (366)
                      +++..+||-+|+|   ..++.+|+..+. +|++++.+++..+.+++    .|   .+.+.....+...            
T Consensus        28 l~~a~~VLEiGtG---ySTl~lA~~~~g-~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~  103 (202)
T 3cvo_A           28 YEEAEVILEYGSG---GSTVVAAELPGK-HVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAK  103 (202)
T ss_dssp             HHHCSEEEEESCS---HHHHHHHTSTTC-EEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTT
T ss_pred             hhCCCEEEEECch---HHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchh
Confidence            3456899999985   577777774444 89999999988776654    45   3333222122111            


Q ss_pred             ---hHHHHHHHHHh-hCCCCcEEE-EcCCChHHHHHHHHhhcCCceEEE
Q 017793          242 ---VDTDVGKIQNA-MGSGIDVSF-DCVGFDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       242 ---~~~~~~~~~~~-~~~~~d~vl-d~~g~~~~~~~~~~~l~~~G~~v~  285 (366)
                         +......+... ..+.||+|| |.--....+..++..|++||.++.
T Consensus       104 ~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~  152 (202)
T 3cvo_A          104 WRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLF  152 (202)
T ss_dssp             GGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred             hhhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence               11111111111 125799997 443223456678899999998854

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=94.80  E-value=0.21  Score=43.49  Aligned_cols=81  Identities=16%  Similarity=0.208  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC----------------hhHHHHH----HHcCCcee---eecCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD----------------VQRLSIA----RNLGADET---AKVSTD  238 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~----------------~~~~~~~----~~lg~~~~---~~~~~~  238 (366)
                      .+.++||.| ++++|.+.++.+...|+ .|+.++++                +++.+.+    ++.+....   .|. ++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~   87 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV-RD   87 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT-TC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC-CC
Confidence            478899998 68999998888888899 67777665                4443322    22333221   122 22


Q ss_pred             CcchHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          239 IEDVDTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      ..+..+.+.++.+.. +++|+++++.|.
T Consensus        88 ~~~v~~~~~~~~~~~-g~id~lv~nAg~  114 (286)
T 3uve_A           88 YDALKAAVDSGVEQL-GRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHHh-CCCCEEEECCcc
Confidence            233444444443322 479999999874

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=94.78  E-value=0.07  Score=47.73  Aligned_cols=90  Identities=17%  Similarity=0.253  Sum_probs=63.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|+ +|++.+++.++.+.+.++|+..    .    ++.+    +.    ...|+|+-
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~----~----~l~e----ll----~~aDvV~l  206 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ----V----ACSE----LF----ASSDFILL  206 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE----C----CHHH----HH----HHCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee----C----CHHH----HH----hhCCEEEE
Confidence            47799999999999999999999999 7899988875556666667521    1    2222    22    24789988


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEccc
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIGLA  289 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  289 (366)
                      ++....    .+ ...+..|+++..++.++..
T Consensus       207 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          207 ALPLNADTLHLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             cCCCCHHHHHHhCHHHHhhCCCCcEEEECCCC
Confidence            876321    11 3566788888888877643

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=94.77  E-value=0.046  Score=45.28  Aligned_cols=96  Identities=18%  Similarity=0.186  Sum_probs=62.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .++.+||-+|+|. |..++.+++... ..++++++.+++..+.+++    .+... +....   .+....+    .....
T Consensus        55 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~----~~~~~  126 (210)
T 3c3p_A           55 KQPQLVVVPGDGL-GCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQV---GDPLGIA----AGQRD  126 (210)
T ss_dssp             HCCSEEEEESCGG-GHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEE---SCHHHHH----TTCCS
T ss_pred             hCCCEEEEEcCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEE---ecHHHHh----ccCCC
Confidence            3567999999875 888889998763 3489999999988877764    33321 11111   1222211    11134


Q ss_pred             CCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          256 GIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       256 ~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                       ||+|+-....   ...+..+.+.|+++|.++.-
T Consensus       127 -fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  159 (210)
T 3c3p_A          127 -IDILFMDCDVFNGADVLERMNRCLAKNALLIAV  159 (210)
T ss_dssp             -EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             -CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence             9999754321   34677788899999998864

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=94.76  E-value=0.25  Score=43.39  Aligned_cols=81  Identities=20%  Similarity=0.249  Sum_probs=49.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC------------hhHHH----HHHHcCCcee---eecCCCCcch
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRLS----IARNLGADET---AKVSTDIEDV  242 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~~---~~~~~~~~~~  242 (366)
                      .+.++||.| ++++|.+.++.+...|+ .|++++++            .++.+    .+++.+....   .|. ++..+.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v  104 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV-RDFDAM  104 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC-CCHHHH
Confidence            467899998 68999998888888899 67777665            33332    2234454321   222 222333


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      .+.+.++.+.. +++|+++++.|.
T Consensus       105 ~~~~~~~~~~~-g~iD~lv~nAg~  127 (299)
T 3t7c_A          105 QAAVDDGVTQL-GRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHh-CCCCEEEECCCC
Confidence            44444443322 479999999873

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=94.76  E-value=0.098  Score=45.25  Aligned_cols=79  Identities=25%  Similarity=0.357  Sum_probs=49.0

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          181 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       181 ~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      -..+.++||.| +|++|.+.++.+...|+ .|+.+++++++..   . .... ..|. ++..+..+.+.++.+.. +++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~iD   83 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDV-TNEEEVKEAVEKTTKKY-GRID   83 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCT-TCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecC-CCHHHHHHHHHHHHHHc-CCCC
Confidence            34688999998 68999998888888899 6777777665431   1 1111 1222 22333444444443322 4799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++++.|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=94.75  E-value=0.17  Score=43.36  Aligned_cols=82  Identities=17%  Similarity=0.332  Sum_probs=48.7

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHCCCCeEEEEcCChh---HHHHH-HHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      .+.++||.| +  |++|.+.++.+...|+ +|+.++++++   ..+.+ .+.+....+..+ ++..++.+.+.++.+.. 
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            367899998 5  7999988877777798 6777777764   22222 223422222211 22233333344333322 


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=94.75  E-value=0.13  Score=43.79  Aligned_cols=81  Identities=16%  Similarity=0.300  Sum_probs=48.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHHH----HHHcCCcee-eecC-CCCcchHHHHHHHHHhhCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI----ARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      +.++||.| +|++|.+.++.+...|+ +|+.+++ ++++.+.    +++.+.... +..+ ++..+..+.+.++.+.. +
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   81 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-G   81 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            57889998 69999998888888899 5555544 5454432    233443321 1111 22233444444443322 4


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      ++|+++++.|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 3osu_A           82 SLDVLVNNAGI   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=94.75  E-value=0.23  Score=43.02  Aligned_cols=81  Identities=21%  Similarity=0.285  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC------------hhHHHH----HHHcCCcee---eecCCCCcch
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRLSI----ARNLGADET---AKVSTDIEDV  242 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~------------~~~~~~----~~~lg~~~~---~~~~~~~~~~  242 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++            .++.+.    +++.+....   .|. ++..++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v   89 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADV-RDRESL   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCT-TCHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCC-CCHHHH
Confidence            468899998 68999998888888899 67777665            333322    233443321   122 222334


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      .+.+.++.+.. +++|+++++.|.
T Consensus        90 ~~~~~~~~~~~-g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDEL-GRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCC
Confidence            44444443322 479999999885

>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}

Probab=94.72  E-value=0.094  Score=45.63  Aligned_cols=95  Identities=22%  Similarity=0.353  Sum_probs=63.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CC-ceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GA-DETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.    |. +.+.....+..++.       ......|
T Consensus        68 ~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~~f  137 (285)
T 4htf_A           68 QKLRVLDAGGGE-GQTAIKMAER-GH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA-------SHLETPV  137 (285)
T ss_dssp             SCCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG-------GGCSSCE
T ss_pred             CCCEEEEeCCcc-hHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh-------hhcCCCc
Confidence            467999999876 7788888887 77 899999999888777653    33 12111112111111       0124679


Q ss_pred             cEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEc
Q 017793          258 DVSFDCVG-----F-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       258 d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      |+|+....     . ...+..+.+.|+|+|.++...
T Consensus       138 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (285)
T 4htf_A          138 DLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMF  173 (285)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             eEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence            99986432     1 246788889999999988753

>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46

Probab=94.69  E-value=0.11  Score=41.00  Aligned_cols=99  Identities=18%  Similarity=0.217  Sum_probs=61.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ++++.+||-.|||. |..+..+++. |. .+++++.+++..+.+++    .+. .+..+.   .++.+.+..... .+..
T Consensus        39 ~~~~~~vLD~GcG~-G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~---~d~~~~~~~~~~-~~~~  110 (171)
T 1ws6_A           39 YPRRGRFLDPFAGS-GAVGLEAASE-GW-EAVLVEKDPEAVRLLKENVRRTGL-GARVVA---LPVEVFLPEAKA-QGER  110 (171)
T ss_dssp             CTTCCEEEEETCSS-CHHHHHHHHT-TC-EEEEECCCHHHHHHHHHHHHHHTC-CCEEEC---SCHHHHHHHHHH-TTCC
T ss_pred             ccCCCeEEEeCCCc-CHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHHHcCC-ceEEEe---ccHHHHHHhhhc-cCCc
Confidence            34788999998775 6677777775 66 49999999987777654    332 111111   233333322221 1346


Q ss_pred             CcEEEEcC----CChHHHHHHH--HhhcCCceEEEEc
Q 017793          257 IDVSFDCV----GFDKTMSTAL--NATRPGGKVCLIG  287 (366)
Q Consensus       257 ~d~vld~~----g~~~~~~~~~--~~l~~~G~~v~~g  287 (366)
                      +|+|+...    .....+....  +.|+++|.++...
T Consensus       111 ~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~  147 (171)
T 1ws6_A          111 FTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQH  147 (171)
T ss_dssp             EEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred             eEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEe
Confidence            99998763    1234566666  7899999987654

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.66  E-value=0.24  Score=44.42  Aligned_cols=89  Identities=18%  Similarity=0.191  Sum_probs=61.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      |.+|.|+|.|.+|...++.++..|. +|++.+++..+.+...  +...+       .++    .++.    ...|+|+-+
T Consensus       173 gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~-------~~l----~ell----~~sDvV~l~  234 (345)
T 4g2n_A          173 GRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH-------DTL----DSLL----GASDIFLIA  234 (345)
T ss_dssp             TCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC-------SSH----HHHH----HTCSEEEEC
T ss_pred             CCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe-------CCH----HHHH----hhCCEEEEe
Confidence            6799999999999999999999999 7889988764443322  43211       122    2232    258999988


Q ss_pred             CCC-hH---HH-HHHHHhhcCCceEEEEcccC
Q 017793          264 VGF-DK---TM-STALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       264 ~g~-~~---~~-~~~~~~l~~~G~~v~~g~~~  290 (366)
                      ++. ++   .+ ...+..|+++..++-++...
T Consensus       235 ~Plt~~T~~li~~~~l~~mk~gailIN~aRG~  266 (345)
T 4g2n_A          235 APGRPELKGFLDHDRIAKIPEGAVVINISRGD  266 (345)
T ss_dssp             SCCCGGGTTCBCHHHHHHSCTTEEEEECSCGG
T ss_pred             cCCCHHHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence            873 22   12 45678899999888776433

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.66  E-value=0.44  Score=43.06  Aligned_cols=45  Identities=18%  Similarity=0.310  Sum_probs=37.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  229 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  229 (366)
                      .-+|.|+|.|.+|....+.+...|. .|++.++++++.+.+.+.|+
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~   66 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGI   66 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCC
Confidence            3689999999999988888888898 78889999998887776654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=94.64  E-value=0.16  Score=43.86  Aligned_cols=81  Identities=17%  Similarity=0.261  Sum_probs=49.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCcee-e--ecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSIA----RNLGADET-A--KVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~~~----~~lg~~~~-~--~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++ ++++.+.+    ++.+.... +  |. ++..+..+.+.++.+..
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-SQESEVEALFAAVIERW  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHHHc
Confidence            467899998 68999998888888899 5655555 55544332    33343321 1  22 22233444444443322


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +++|+++++.|.
T Consensus       105 -g~id~lv~nAg~  116 (269)
T 4dmm_A          105 -GRLDVLVNNAGI  116 (269)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999875

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=94.63  E-value=0.44  Score=41.42  Aligned_cols=41  Identities=24%  Similarity=0.446  Sum_probs=35.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  226 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  226 (366)
                      .+|.|+|+|.+|....+.+...|. .|+..+.++++.+.+.+
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            589999999999998888888899 78889999988766554

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=94.63  E-value=0.4  Score=41.98  Aligned_cols=87  Identities=15%  Similarity=0.221  Sum_probs=57.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      -+|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .+..+.+        ..+|+|+.|+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~D~vi~~v   68 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---C----ENNQKVA--------AASDIIFTSL   68 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---C----SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---c----CCHHHHH--------hCCCEEEEEC
Confidence            479999999999888777777788 6888888888877766655421   1    1222211        1378999988


Q ss_pred             CChHHHHHHH-------HhhcCCceEEEEc
Q 017793          265 GFDKTMSTAL-------NATRPGGKVCLIG  287 (366)
Q Consensus       265 g~~~~~~~~~-------~~l~~~G~~v~~g  287 (366)
                      +.+......+       ..+.++..++.+.
T Consensus        69 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~   98 (301)
T 3cky_A           69 PNAGIVETVMNGPGGVLSACKAGTVIVDMS   98 (301)
T ss_dssp             SSHHHHHHHHHSTTCHHHHSCTTCEEEECC
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEECC
Confidence            7654444444       3455666555543

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=94.62  E-value=0.4  Score=43.41  Aligned_cols=130  Identities=14%  Similarity=0.152  Sum_probs=76.7

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLV-TLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~-ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      -+|.|+|+|.+|.. .+..++.. +++.+.+++.++++..  ++++....  |    .++.    ++.+  ...+|+|+.
T Consensus         8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~--~----~~~~----~ll~--~~~~D~V~i   73 (364)
T 3e82_A            8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK--RDLPDVTV--I----ASPE----AAVQ--HPDVDLVVI   73 (364)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--HHCTTSEE--E----SCHH----HHHT--CTTCSEEEE
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--hhCCCCcE--E----CCHH----HHhc--CCCCCEEEE
Confidence            47899999999974 66666654 6744556677776643  44443332  2    1232    2332  357999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      |.+...+...+..+|..|-. +++.-+.........    ..-..++.+.-..  .+...++.+.+++++|.+
T Consensus        74 ~tp~~~H~~~~~~al~aGk~-Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  145 (364)
T 3e82_A           74 ASPNATHAPLARLALNAGKH-VVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTL  145 (364)
T ss_dssp             CSCGGGHHHHHHHHHHTTCE-EEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHTTT
T ss_pred             eCChHHHHHHHHHHHHCCCc-EEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcCCC
Confidence            99988888888888887644 555432211111111    1122333333222  225568888899999887

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=94.61  E-value=0.42  Score=43.12  Aligned_cols=132  Identities=16%  Similarity=0.184  Sum_probs=79.4

Q ss_pred             CEEEEECCCHHHHHHHHHHH-H-CCCCeEEEEcCChhHHH-HHHHcCC-ceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          185 TNVMIMGSGPIGLVTLLAAR-A-FGAPRIIITDVDVQRLS-IARNLGA-DETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~-~-~g~~~vv~v~~~~~~~~-~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      -+|.|+|+|.+|...+..++ . -+++.+.+++.++++.+ +++++|. ...  +    .++.+    +.+  ...+|+|
T Consensus        24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~--~----~~~~~----ll~--~~~~D~V   91 (357)
T 3ec7_A           24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKD--Y----NDYHD----LIN--DKDVEVV   91 (357)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEE--E----SSHHH----HHH--CTTCCEE
T ss_pred             eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCee--e----CCHHH----Hhc--CCCCCEE
Confidence            37999999999987666665 3 36644556777777755 5566773 222  2    13322    322  3579999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEE--EEe-eccCCChHHHHHHHHCCCC
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDV--IGI-FRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~--~~~-~~~~~~~~~~~~~l~~g~~  329 (366)
                      +.|++...+...+..+|..|-. +++.-+.........    ..-..+..+  .+. ..+...++.+.+++++|.+
T Consensus        92 ~i~tp~~~h~~~~~~al~aGk~-Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~g~i  166 (357)
T 3ec7_A           92 IITASNEAHADVAVAALNANKY-VFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEI  166 (357)
T ss_dssp             EECSCGGGHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHHTTT
T ss_pred             EEcCCcHHHHHHHHHHHHCCCC-EEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhcCCC
Confidence            9999988888888888887754 444332211111111    111223322  233 2336678888888888877

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=94.61  E-value=0.27  Score=43.71  Aligned_cols=81  Identities=22%  Similarity=0.295  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC---------ChhHHHH----HHHcCCceeeecCCCCcchHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV---------DVQRLSI----ARNLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~---------~~~~~~~----~~~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      .+.++||.| +|++|...++.+...|+ .|++++.         +.++.+.    +++.+.....++. +..+..+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~-~~~~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYD-SVEAGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECC-CGGGHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCC-CHHHHHHHHHH
Confidence            467889998 68999998888888899 6776533         3444322    2333444444442 33344444444


Q ss_pred             HHHhhCCCCcEEEEcCCC
Q 017793          249 IQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~  266 (366)
                      +.+. -+++|++|++.|.
T Consensus        86 ~~~~-~g~iD~lVnnAG~  102 (319)
T 1gz6_A           86 ALDT-FGRIDVVVNNAGI  102 (319)
T ss_dssp             HHHH-TSCCCEEEECCCC
T ss_pred             HHHH-cCCCCEEEECCCC
Confidence            4332 3579999999873

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=94.60  E-value=0.14  Score=44.67  Aligned_cols=74  Identities=14%  Similarity=0.297  Sum_probs=48.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc----CCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE-TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~-~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++.++||.| +|++|.+++..+...|+ .|+.++++.++.+.+ +++    +... ..+..    +. +.+.+.    -.
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~----~~-~~~~~~----~~  187 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----DD-ASRAEA----VK  187 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----SH-HHHHHH----TT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCC----CH-HHHHHH----HH
Confidence            578999999 89999999998888999 588888887765533 333    2221 12221    11 123222    23


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|+++++.|.
T Consensus       188 ~~DvlVn~ag~  198 (287)
T 1lu9_A          188 GAHFVFTAGAI  198 (287)
T ss_dssp             TCSEEEECCCT
T ss_pred             hCCEEEECCCc
Confidence            58999999973

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=94.60  E-value=0.072  Score=45.67  Aligned_cols=78  Identities=21%  Similarity=0.387  Sum_probs=47.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++  .+++++....   .|. ++.++....+....+  -+++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~--~g~id   81 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADV-TDEAAVASALDLAET--MGTLR   81 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCT-TCHHHHHHHHHHHHH--HSCEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCC-CCHHHHHHHHHHHHH--hCCCC
Confidence            367899998 68999988887777899 67777664433  3445554321   122 222333333333322  35799


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +++++.|.
T Consensus        82 ~lv~nAg~   89 (257)
T 3tl3_A           82 IVVNCAGT   89 (257)
T ss_dssp             EEEECGGG
T ss_pred             EEEECCCC
Confidence            99999984

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=94.60  E-value=0.17  Score=45.62  Aligned_cols=130  Identities=16%  Similarity=0.120  Sum_probs=76.3

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLV-TLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~-ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      -+|.|+|+|.+|.. .+..++.. +++.+.+++.++++.+  ++++....  |    .++.    ++.+  ...+|+|+.
T Consensus         8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~--~----~~~~----~ll~--~~~vD~V~i   73 (352)
T 3kux_A            8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH--ADWPAIPV--V----SDPQ----MLFN--DPSIDLIVI   73 (352)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--TTCSSCCE--E----SCHH----HHHH--CSSCCEEEE
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH--hhCCCCce--E----CCHH----HHhc--CCCCCEEEE
Confidence            47899999999974 66665554 6744556677776654  23322111  1    2332    3332  457999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEee--ccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~  329 (366)
                      |.....+...+..+|..|-. +++.-+.........    ..-..++.+.-..  .+...++.+.+++++|.+
T Consensus        74 ~tp~~~H~~~~~~al~aGkh-V~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  145 (352)
T 3kux_A           74 PTPNDTHFPLAQSALAAGKH-VVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSL  145 (352)
T ss_dssp             CSCTTTHHHHHHHHHHTTCE-EEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTT
T ss_pred             eCChHHHHHHHHHHHHCCCc-EEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhcCCC
Confidence            99988888888888887754 445433111111111    1122333333222  235668888899998887

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=94.59  E-value=0.11  Score=43.39  Aligned_cols=101  Identities=13%  Similarity=0.155  Sum_probs=60.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHh-h
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNA-M  253 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~-~  253 (366)
                      ..++.+||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+... +....   .+..+.+..+... .
T Consensus        56 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~l~~~~~~~~  131 (221)
T 3u81_A           56 EYSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILN---GASQDLIPQLKKKYD  131 (221)
T ss_dssp             HHCCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHGGGTTTTSC
T ss_pred             hcCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEE---CCHHHHHHHHHHhcC
Confidence            35678999999876 778888888653 2389999999988777765    45432 21111   2322222211100 0


Q ss_pred             CCCCcEEEEcCCChHH------HHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCVGFDKT------MSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~g~~~~------~~~~~~~l~~~G~~v~~  286 (366)
                      ...||+|+-.......      +... +.|++||.++.-
T Consensus       132 ~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~  169 (221)
T 3u81_A          132 VDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD  169 (221)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred             CCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence            1579999765432211      1122 689999998764

>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42

Probab=94.58  E-value=0.13  Score=43.61  Aligned_cols=101  Identities=14%  Similarity=0.036  Sum_probs=65.9

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhhC
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .....+++.+||-+|||. |..+..+++.. ...+++++.+++..+.+++.-.  ..+.....   ++..    + ....
T Consensus        87 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---d~~~----~-~~~~  156 (254)
T 1xtp_A           87 ASLPGHGTSRALDCGAGI-GRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILA---SMET----A-TLPP  156 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEES---CGGG----C-CCCS
T ss_pred             HhhcccCCCEEEEECCCc-CHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEc---cHHH----C-CCCC
Confidence            445567889999999876 77777777764 4479999999998888876532  12211111   1111    0 0013


Q ss_pred             CCCcEEEEcCC--------ChHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVG--------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g--------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..+|+|+....        -...+..+.+.|+++|.++...
T Consensus       157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  197 (254)
T 1xtp_A          157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence            57999986432        1235677888999999988764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=94.57  E-value=0.2  Score=45.03  Aligned_cols=79  Identities=16%  Similarity=0.267  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.+|||.| +|.+|...++.+... |...|+++++++++.+.+. ++....+..+..+-.+. +.+.++    -.++|+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~----~~~~D~   94 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL-ERLNYA----LEGVDI   94 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH-HHHHHH----TTTCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH-HHHHHH----HhcCCE
Confidence            468999998 699999988877777 8757888888877665443 33322221111221222 223333    247999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ||.+.+.
T Consensus        95 Vih~Aa~  101 (344)
T 2gn4_A           95 CIHAAAL  101 (344)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=94.57  E-value=0.23  Score=46.31  Aligned_cols=138  Identities=12%  Similarity=0.148  Sum_probs=79.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      -+|.|+|+|.+|...+..++.. +++.+.+++.++++.+.+.    ++|......+.....++    +++.+  ...+|+
T Consensus        21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~----~~ll~--~~~vD~   94 (444)
T 2ixa_A           21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDY----KNMLK--DKNIDA   94 (444)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTH----HHHTT--CTTCCE
T ss_pred             ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCH----HHHhc--CCCCCE
Confidence            4789999999997766655544 6645566678887766443    34542211222111133    22321  346999


Q ss_pred             EEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEe--eccCCChHHHHHHHHCCCC
Q 017793          260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGI--FRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  329 (366)
                      |+.|+....+...+..+|..|-. +++.-+.....-...    ..-..++.+.-.  ..+...++.+.+++++|.+
T Consensus        95 V~i~tp~~~h~~~~~~al~aGkh-V~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~G~i  169 (444)
T 2ixa_A           95 VFVSSPWEWHHEHGVAAMKAGKI-VGMEVSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMVRKGMF  169 (444)
T ss_dssp             EEECCCGGGHHHHHHHHHHTTCE-EEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             EEEcCCcHHHHHHHHHHHHCCCe-EEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHHcCCC
Confidence            99999988888888888887644 445422111100011    111233333322  2235567888999999887

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.56  E-value=0.13  Score=46.09  Aligned_cols=89  Identities=15%  Similarity=0.125  Sum_probs=60.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|. .|++.+++.++.+.+.++|....        ++.+.+        ...|+|+.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l--------~~aDvVi~  216 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV--------STPELA--------AQSDFIVV  216 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC--------CHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC--------CHHHHH--------hhCCEEEE
Confidence            36789999999999999999999998 68888877665555555554211        222221        24799999


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEcc
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  288 (366)
                      +++...    .+ ...+..|+++..++.++.
T Consensus       217 ~vp~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          217 ACSLTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCCCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             eCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            887531    12 345677888887766543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=94.55  E-value=0.22  Score=42.53  Aligned_cols=80  Identities=21%  Similarity=0.284  Sum_probs=48.8

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH--HH-HHHHc---CCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR--LS-IARNL---GADE-T--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~--~~-~~~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +.++||.| +|++|.+.++.+...|+ .|+.+++++++  .+ .++++   +... .  .|. ++..++.+.+.++.+..
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV-TDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHHh
Confidence            56899998 68999988887777799 67777777665  33 22332   3321 1  122 22233334444433322


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +++|+++++.|.
T Consensus        80 -g~iD~lv~nAg~   91 (258)
T 3a28_C           80 -GGFDVLVNNAGI   91 (258)
T ss_dssp             -TCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=94.52  E-value=0.24  Score=42.91  Aligned_cols=82  Identities=15%  Similarity=0.191  Sum_probs=49.8

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHHHH-cCCceeeecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDV--QRLSIARN-LGADETAKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~--~~~~~~~~-lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.++||.| +  +++|.+.++.+...|+ +|+.++++.  +..+.+.+ .+....+..+ ++..+..+.+.++.+. -+
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g  102 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV-WD  102 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH-cC
Confidence            468899998 5  4599988888878899 677777766  44444433 3322222211 2223344444444332 35


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|+++.+.|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}

Probab=94.51  E-value=0.079  Score=43.63  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=28.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  226 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  226 (366)
                      +++.+||-.|+|. |..+..+++......+++++.+++..+.+++
T Consensus        29 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~   72 (215)
T 4dzr_A           29 PSGTRVIDVGTGS-GCIAVSIALACPGVSVTAVDLSMDALAVARR   72 (215)
T ss_dssp             CTTEEEEEEESSB-CHHHHHHHHHCTTEEEEEEECC---------
T ss_pred             CCCCEEEEecCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHH
Confidence            7888999998875 7788888887533389999999988877765

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=94.50  E-value=0.098  Score=48.21  Aligned_cols=88  Identities=18%  Similarity=0.187  Sum_probs=52.8

Q ss_pred             hCCC-CCCCEEEEEC-CCHHHHHHHHHHHH-CCCCeEEEEcCChhH----------------HHHHHHcCCcee-eecC-
Q 017793          178 RANV-GPETNVMIMG-SGPIGLVTLLAARA-FGAPRIIITDVDVQR----------------LSIARNLGADET-AKVS-  236 (366)
Q Consensus       178 ~~~~-~~~~~vlI~G-~g~vG~~ai~la~~-~g~~~vv~v~~~~~~----------------~~~~~~lg~~~~-~~~~-  236 (366)
                      ...+ +.+.++||.| ++++|.+....+.. .|+ .|+.++++.+.                .+.+++.|.... +..+ 
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3556 3567789998 68999887666666 899 67776554321                144556665432 2111 


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      ++.+...+.+..+.+..++++|+++++.|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            223344444444444332679999999875

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=94.49  E-value=0.18  Score=44.85  Aligned_cols=81  Identities=22%  Similarity=0.345  Sum_probs=49.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC----------hhHHH----HHHHcCCceeeecCC---CCcchHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD----------VQRLS----IARNLGADETAKVST---DIEDVDT  244 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~----------~~~~~----~~~~lg~~~~~~~~~---~~~~~~~  244 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++          .++.+    .+++.+.... .+..   +..+..+
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAV-ADGSNVADWDQAAG  103 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEE-EECCCTTSHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHH
Confidence            477899998 68999998888888899 67777665          33322    2233443222 1222   2223333


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCC
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      .+.++.+.. +++|+++.+.|.
T Consensus       104 ~~~~~~~~~-g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETF-GGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHH-SCCCEEECCCCC
T ss_pred             HHHHHHHHc-CCCCEEEECCCC
Confidence            344433322 479999999884

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=94.48  E-value=0.13  Score=44.90  Aligned_cols=83  Identities=12%  Similarity=0.063  Sum_probs=51.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|.|+|+|.+|...+..+.. |. .|++.++++++.+.+.+.|....   .     ..+    .    -..+|+|+.|+.
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~---~-----~~~----~----~~~~D~vi~~v~   64 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA---V-----PLE----R----VAEARVIFTCLP   64 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE---C-----CGG----G----GGGCSEEEECCS
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc---C-----HHH----H----HhCCCEEEEeCC
Confidence            58899999999887777666 98 57888888888777666554321   0     001    1    124788888887


Q ss_pred             ChHHHHHHHH----hhcCCceEEEE
Q 017793          266 FDKTMSTALN----ATRPGGKVCLI  286 (366)
Q Consensus       266 ~~~~~~~~~~----~l~~~G~~v~~  286 (366)
                      .+......++    .++++..++.+
T Consensus        65 ~~~~~~~v~~~l~~~l~~~~~vv~~   89 (289)
T 2cvz_A           65 TTREVYEVAEALYPYLREGTYWVDA   89 (289)
T ss_dssp             SHHHHHHHHHHHTTTCCTTEEEEEC
T ss_pred             ChHHHHHHHHHHHhhCCCCCEEEEC
Confidence            6643443332    33444444444

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=94.45  E-value=0.29  Score=42.35  Aligned_cols=81  Identities=20%  Similarity=0.213  Sum_probs=49.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-------------ChhHHHH----HHHcCCcee---eecCCCCcc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-------------DVQRLSI----ARNLGADET---AKVSTDIED  241 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-------------~~~~~~~----~~~lg~~~~---~~~~~~~~~  241 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+++             +.++.+.    +++.+....   .|. ++..+
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~   87 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT-RDFDR   87 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-CCHHH
Confidence            468899998 68999998888888899 6777765             3443332    223343221   121 22233


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                      ..+.+.++.+.. +++|+++++.|.
T Consensus        88 v~~~~~~~~~~~-g~id~lvnnAg~  111 (277)
T 3tsc_A           88 LRKVVDDGVAAL-GRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCC
Confidence            334444433322 479999999874

>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0

Probab=94.45  E-value=0.13  Score=42.04  Aligned_cols=99  Identities=22%  Similarity=0.218  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH-hhCCCCc
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMGSGID  258 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d  258 (366)
                      -++++++||=+|+|+ |..+..+++. +. +|++++.++...    .-+.. .+.-+-........+.+... .+...+|
T Consensus        22 ~~~~g~~VLDlG~G~-G~~s~~la~~-~~-~V~gvD~~~~~~----~~~v~-~~~~D~~~~~~~~~~~~~~~~~~~~~~D   93 (191)
T 3dou_A           22 VVRKGDAVIEIGSSP-GGWTQVLNSL-AR-KIISIDLQEMEE----IAGVR-FIRCDIFKETIFDDIDRALREEGIEKVD   93 (191)
T ss_dssp             CSCTTCEEEEESCTT-CHHHHHHTTT-CS-EEEEEESSCCCC----CTTCE-EEECCTTSSSHHHHHHHHHHHHTCSSEE
T ss_pred             CCCCCCEEEEEeecC-CHHHHHHHHc-CC-cEEEEecccccc----CCCeE-EEEccccCHHHHHHHHHHhhcccCCcce
Confidence            368899999999765 6666666666 55 899999887531    01221 11111112233333333221 1114899


Q ss_pred             EEEEc-----CCCh------------HHHHHHHHhhcCCceEEEE
Q 017793          259 VSFDC-----VGFD------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       259 ~vld~-----~g~~------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      +|+..     .|..            ..+..+.+.|+|||+++..
T Consensus        94 ~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k  138 (191)
T 3dou_A           94 DVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK  138 (191)
T ss_dssp             EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence            99863     2221            2455677899999999864

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.44  E-value=0.12  Score=48.37  Aligned_cols=95  Identities=14%  Similarity=0.176  Sum_probs=55.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +.+|+|+|+|.+|.+.++.+...|. .|++++++.++.+.+. +++....+..  +..+. ..+.++.    .++|+|++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~--Dv~d~-~~l~~~l----~~~DvVIn   74 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISL--DVNDD-AALDAEV----AKHDLVIS   74 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEEC--CTTCH-HHHHHHH----TTSSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEe--ecCCH-HHHHHHH----cCCcEEEE
Confidence            4689999999999998888888887 6888888877665432 2332112111  11122 2233332    37999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEE
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      |.+...+......++..+-.++..
T Consensus        75 ~a~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           75 LIPYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             CCC--CHHHHHHHHHHHTCEEEES
T ss_pred             CCccccchHHHHHHHhCCCeEEEe
Confidence            998543333334455555555443

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=94.43  E-value=0.16  Score=45.48  Aligned_cols=86  Identities=17%  Similarity=0.233  Sum_probs=56.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.++|...    .    ++.+.+        ...|+|+.
T Consensus       145 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~l~e~l--------~~aDiVil  206 (333)
T 2d0i_A          145 YGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELKARY----M----DIDELL--------EKSDIVIL  206 (333)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHTEEE----C----CHHHHH--------HHCSEEEE
T ss_pred             CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----c----CHHHHH--------hhCCEEEE
Confidence            46789999999999999999999998 78888888776 5555555321    1    222211        13688887


Q ss_pred             cCCChH----HH-HHHHHhhcCCceEEEEc
Q 017793          263 CVGFDK----TM-STALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~~~----~~-~~~~~~l~~~G~~v~~g  287 (366)
                      +++...    .+ ...+..|+++ .++.++
T Consensus       207 ~vp~~~~t~~~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          207 ALPLTRDTYHIINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             CCCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred             cCCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence            776541    12 1345667777 655554

>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}

Probab=94.43  E-value=0.095  Score=45.84  Aligned_cols=98  Identities=20%  Similarity=0.288  Sum_probs=65.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC------C---ceeeecCCCCcchHHHHHHHHHh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------A---DETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~---~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....+|||+|.|. |..+-.+++..+.++|.+++-+++-.+.++++-      +   ..+-.+..+...+   ++    .
T Consensus        82 p~pk~VLIiGgGd-G~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~---l~----~  153 (294)
T 3o4f_A           82 GHAKHVLIIGGGD-GAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF---VN----Q  153 (294)
T ss_dssp             SCCCEEEEESCTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT---TS----C
T ss_pred             CCCCeEEEECCCc-hHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH---Hh----h
Confidence            4568999998766 666778888888889999999999888877642      1   1121112222222   22    1


Q ss_pred             hCCCCcEEEE-cCC---------ChHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFD-CVG---------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld-~~g---------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....+|+||- +..         +.+.++.+.+.|+++|.++...
T Consensus       154 ~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~  198 (294)
T 3o4f_A          154 TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN  198 (294)
T ss_dssp             SSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence            3567999963 221         1257888999999999998764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=94.43  E-value=0.17  Score=43.10  Aligned_cols=77  Identities=21%  Similarity=0.256  Sum_probs=48.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+.++||.| +|++|.+.++.+...|+ +|+.++++++.    ++.+...+ .|. ++.+++.+.+.++.+. -+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDV-ADAAQVAQVCQRLLAE-TERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCT-TCHHHHHHHHHHHHHH-CSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence            367899998 69999998888888899 67777776542    22332111 122 2223344444443332 3579999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +++.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999874

>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20

Probab=94.42  E-value=0.073  Score=43.75  Aligned_cols=94  Identities=15%  Similarity=0.186  Sum_probs=60.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.+||=+|+|. |..+..+++..+...+++++.+++..+.+++    .+...+.....+..++.         ....+|
T Consensus        65 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---------~~~~~D  134 (207)
T 1jsx_A           65 QGERFIDVGTGP-GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---------SEPPFD  134 (207)
T ss_dssp             CSSEEEEETCTT-TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---------CCSCEE
T ss_pred             CCCeEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---------ccCCcC
Confidence            578898898766 7777788887644489999999988777654    45432221212211110         135699


Q ss_pred             EEEEcCCC--hHHHHHHHHhhcCCceEEEE
Q 017793          259 VSFDCVGF--DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       259 ~vld~~g~--~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +|+...-.  ...+..+.+.|+++|.++..
T Consensus       135 ~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~  164 (207)
T 1jsx_A          135 GVISRAFASLNDMVSWCHHLPGEQGRFYAL  164 (207)
T ss_dssp             EEECSCSSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred             EEEEeccCCHHHHHHHHHHhcCCCcEEEEE
Confidence            99853211  23566677788999998876

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=94.42  E-value=0.26  Score=41.56  Aligned_cols=82  Identities=20%  Similarity=0.212  Sum_probs=49.1

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCC------eEEEEcCChhHHHHHH-Hc---CCce-eeecC-CCCcchHHHHHHHH
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAP------RIIITDVDVQRLSIAR-NL---GADE-TAKVS-TDIEDVDTDVGKIQ  250 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~------~vv~v~~~~~~~~~~~-~l---g~~~-~~~~~-~~~~~~~~~~~~~~  250 (366)
                      +.++||.| +|.+|...++.+...|+.      .|+.+++++++.+.+. ++   +... .+..+ ++...+.+.+.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            45789998 699998888777777874      5777778877655432 22   3221 11111 12223333333333


Q ss_pred             HhhCCCCcEEEEcCCC
Q 017793          251 NAMGSGIDVSFDCVGF  266 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~  266 (366)
                      +. -+++|+++.+.|.
T Consensus        82 ~~-~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ER-YGHIDCLVNNAGV   96 (244)
T ss_dssp             HH-TSCCSEEEECCCC
T ss_pred             Hh-CCCCCEEEEcCCc
Confidence            32 3579999999873

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=94.41  E-value=0.3  Score=42.64  Aligned_cols=81  Identities=11%  Similarity=0.070  Sum_probs=50.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEc-CChhHHHHH-H----HcCCce-e--eecCCCCc------------
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD-VDVQRLSIA-R----NLGADE-T--AKVSTDIE------------  240 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~-~----~lg~~~-~--~~~~~~~~------------  240 (366)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++ +++++.+.+ +    +.+... .  .|+ ++..            
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADL-SNVATAPVSGADGSAP   85 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC-SSSCBCCCC----CCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeec-CCcccccccccccccc
Confidence            367889998 68999998888888899 677777 777655432 2    234221 1  222 2223            


Q ss_pred             -----chHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793          241 -----DVDTDVGKIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       241 -----~~~~~~~~~~~~~~~~~d~vld~~g~  266 (366)
                           ++.+.+.++.+.. +++|+++++.|.
T Consensus        86 ~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~  115 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHW-GRCDVLVNNASS  115 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             cchHHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence                 3444444443322 479999999874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=94.40  E-value=0.22  Score=43.40  Aligned_cols=81  Identities=21%  Similarity=0.282  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-----------HHHHHHcCCcee-e--ecCCCCcchHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-----------LSIARNLGADET-A--KVSTDIEDVDTDVG  247 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~~-~--~~~~~~~~~~~~~~  247 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.+++++++           .+.+++.+.... +  |. ++.++..+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~   85 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDI-RDGDAVAAAVA   85 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHH
Confidence            467899998 68999998888888899 67777776542           223344444321 1  22 22233444444


Q ss_pred             HHHHhhCCCCcEEEEcCCC
Q 017793          248 KIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~  266 (366)
                      ++.+.. +++|+++++.|.
T Consensus        86 ~~~~~~-g~id~lvnnAg~  103 (285)
T 3sc4_A           86 KTVEQF-GGIDICVNNASA  103 (285)
T ss_dssp             HHHHHH-SCCSEEEECCCC
T ss_pred             HHHHHc-CCCCEEEECCCC
Confidence            443322 479999999874

>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*

Probab=94.40  E-value=0.11  Score=47.39  Aligned_cols=96  Identities=14%  Similarity=0.086  Sum_probs=63.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----c---------------CCceeeecCCCCcchH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----L---------------GADETAKVSTDIEDVD  243 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----l---------------g~~~~~~~~~~~~~~~  243 (366)
                      ++.+||=.|+|. |..++.+++..+...|++++.+++..+.+++    .               |.+.+..+.   .|..
T Consensus        47 ~~~~VLDl~aGt-G~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~---~Da~  122 (378)
T 2dul_A           47 NPKIVLDALSAT-GIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH---DDAN  122 (378)
T ss_dssp             CCSEEEESSCTT-SHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE---SCHH
T ss_pred             CCCEEEECCCch-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEc---CcHH
Confidence            577777666554 7788888888776579999999998887764    3               444322221   2333


Q ss_pred             HHHHHHHHhhCCCCcEEEE-cCCC-hHHHHHHHHhhcCCceEEEE
Q 017793          244 TDVGKIQNAMGSGIDVSFD-CVGF-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld-~~g~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+...    ...||+|+. ..+. ...+..+++.++++|.++..
T Consensus       123 ~~~~~~----~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt  163 (378)
T 2dul_A          123 RLMAER----HRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVT  163 (378)
T ss_dssp             HHHHHS----TTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHHHhc----cCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEE
Confidence            332221    346998864 3333 35778899999999977654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=94.40  E-value=0.17  Score=43.72  Aligned_cols=83  Identities=14%  Similarity=0.170  Sum_probs=50.0

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee-e--ecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET-A--KVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~-~--~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ..+.++||.| +|++|.+.++.+...|++.++...+++++.+.+    ++.+.... +  |. ++..++.+.+.++.+..
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDV-GNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHhC
Confidence            3567899998 699999988888888994334446676655433    23343221 1  22 22233444444443322


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                       +++|+++.+.|.
T Consensus       103 -g~id~li~nAg~  114 (272)
T 4e3z_A          103 -GRLDGLVNNAGI  114 (272)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999873

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=94.39  E-value=0.22  Score=43.06  Aligned_cols=81  Identities=21%  Similarity=0.310  Sum_probs=49.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-----------HHHHHHcCCcee---eecCCCCcchHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-----------LSIARNLGADET---AKVSTDIEDVDTDVG  247 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~~---~~~~~~~~~~~~~~~  247 (366)
                      .+.++||.| ++++|.+.++.+...|+ +|+.++++.++           .+.+++.+....   .|. ++..+..+.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~   82 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDI-REEDQVRAAVA   82 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCT-TCHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCC-CCHHHHHHHHH
Confidence            467899998 68999998888888899 67777776542           122233343221   122 22233344444


Q ss_pred             HHHHhhCCCCcEEEEcCCC
Q 017793          248 KIQNAMGSGIDVSFDCVGF  266 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~  266 (366)
                      ++.+.. +++|+++++.|.
T Consensus        83 ~~~~~~-g~iD~lvnnAG~  100 (274)
T 3e03_A           83 ATVDTF-GGIDILVNNASA  100 (274)
T ss_dssp             HHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHc-CCCCEEEECCCc
Confidence            443322 479999999984

>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41

Probab=94.38  E-value=0.19  Score=43.01  Aligned_cols=92  Identities=20%  Similarity=0.311  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++......+.  .+..++.     .   ..+.+|+|+
T Consensus        53 ~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~~--~d~~~~~-----~---~~~~fD~v~  119 (260)
T 2avn_A           53 KNPCRVLDLGGGT-GKWSLFLQER-GF-EVVLVDPSKEMLEVAREKGVKNVVE--AKAEDLP-----F---PSGAFEAVL  119 (260)
T ss_dssp             CSCCEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHHTCSCEEE--CCTTSCC-----S---CTTCEEEEE
T ss_pred             CCCCeEEEeCCCc-CHHHHHHHHc-CC-eEEEEeCCHHHHHHHHhhcCCCEEE--CcHHHCC-----C---CCCCEEEEE
Confidence            4788999999875 7777777775 66 7999999999988887765432222  1111111     0   135699998


Q ss_pred             EcCC-------ChHHHHHHHHhhcCCceEEEE
Q 017793          262 DCVG-------FDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       262 d~~g-------~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....       -...+..+.+.|+++|+++..
T Consensus       120 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  151 (260)
T 2avn_A          120 ALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  151 (260)
T ss_dssp             ECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EcchhhhccccHHHHHHHHHHHcCCCeEEEEE
Confidence            6431       123557778899999998865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	366
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	4e-35
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	6e-35
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	3e-31
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-26
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-24
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	2e-24
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	7e-24
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	4e-23
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-21
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-21
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-21
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	2e-20
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	6e-20
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	9e-20
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-19
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	4e-18
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	1e-17
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	3e-16
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	3e-16
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	6e-15
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	7e-15
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-11
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	9e-11
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-10
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-10
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	4e-09
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	9e-09
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-08
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	4e-08
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	1e-07
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-07
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	8e-07
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	5e-06
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	5e-05
d2b25a1	324	c.66.1.13 (A:6-329) Hypothetical protein FLJ20628	2e-04
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	6e-04
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	0.001
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	0.002
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	0.003

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 4e-35
 Identities = 73/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)

Query: 158 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217
           V+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG+VTLL A+A GA ++++TD+ 
Sbjct: 1   VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 218 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 277
             RLS A+ +GAD   ++S +         K++  +G   +V+ +C G + ++   + AT
Sbjct: 61  ATRLSKAKEIGADLVLQISKESPQEIAR--KVEGQLGCKPEVTIECTGAEASIQAGIYAT 118

Query: 278 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKID 330
           R GG + L+GL     TV L  AA REVD+ G+FRY +TWP+ I  L S  ++
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVN 171

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 6e-35
 Identities = 75/185 (40%), Positives = 104/185 (56%), Gaps = 7/185 (3%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++       R  NF
Sbjct: 5   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWE-----YGRIGNF 59

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F 
Sbjct: 60  IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 119

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
            +PP +G+L     H A  CYKLPDNV         PL   + A      G    +M+  
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKIML-K 177

Query: 192 SGPIG 196
             P  
Sbjct: 178 CDPSD 182

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  114 bits (285), Expect = 3e-31
 Identities = 76/171 (44%), Positives = 115/171 (67%), Gaps = 1/171 (0%)

Query: 158 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217
           VSLEEGA+ EPLSVGVHACRRA V   T V+++G+GPIGLV++LAA+A+GA  +      
Sbjct: 1   VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSP 60

Query: 218 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 277
            +RL +A+N GAD T  V    E+  + + +I++A+G   +V+ DC G +K ++  +N T
Sbjct: 61  -RRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINIT 119

Query: 278 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGK 328
           R GG + L+G+    +TV L  A ARE+D+  +FRY + +P+ +E + SG+
Sbjct: 120 RTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  102 bits (254), Expect = 1e-26
 Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 6/179 (3%)

Query: 15  NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK 74
           N++A L     L+++   +P     +V +++  +GICGSDVH+++       R A+FIVK
Sbjct: 2   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYE-----HGRIADFIVK 56

Query: 75  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
            PMVIGHE +G + +VG  VK L+ GDRVA+EPG+ C  C  CK G YNLCP++ F  +P
Sbjct: 57  DPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP 116

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGS 192
           P +G+LA   VH A  C+KLPDN ++++       L   V A   A    +  + +M S
Sbjct: 117 PDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 97.3 bits (241), Expect = 1e-24
 Identities = 47/213 (22%), Positives = 81/213 (38%), Gaps = 32/213 (15%)

Query: 15  NMAAWLLGIKTLKIQPYHLPTL-------GPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
           N     LG   +++Q    P +           V +++ +  ICGSD H  +        
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR-------- 53

Query: 68  CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
                 +  +V+GHE  G + E G +V++L++GD V++   ++CG C  CK     +C  
Sbjct: 54  -GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLT 112

Query: 128 MR---------FFGSPPTNGSLAHKVVHPAK--LCYKLPDNVS-LEEGAMCEPLSVGVHA 175
           +          +       G  A  V+ P       KLPD    +E+  + E + V V +
Sbjct: 113 VNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVIS 172

Query: 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA 208
              A  G         +G      +   + F A
Sbjct: 173 LDDAPRGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 97.3 bits (241), Expect = 2e-24
 Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 21/186 (11%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K L ++   +      +V+++I A GICGSD           +       K P+++GHE 
Sbjct: 19  KPLSLETITVAPPKAHEVRIKILASGICGSDSS---------VLKEIIPSKFPVILGHEA 69

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
            G++E +G+ V  ++ GD+V       CG C  CK+ + N C +            +  +
Sbjct: 70  VGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSR 129

Query: 144 VVHPAKLCYKLPDNVSLEEGAMCEPLSVGV------------HACRRANVGPETNVMIMG 191
                K  Y L    +  E  +   ++V                     +     ++  G
Sbjct: 130 FTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQINKAFELLSSG 189

Query: 192 SGPIGL 197
            G   +
Sbjct: 190 QGVRSI 195

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.3 bits (236), Expect = 7e-24
 Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 21/189 (11%)

Query: 14  QNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA 69
           +      +      K  K   Y        D+ ++I+A G+CGSD+H             
Sbjct: 5   EKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH--------CAAGH 56

Query: 70  NFIVKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVAL-EPGISCGHCSLCKAGSYNLCPE 127
              +K P+V+GHE  G + ++G +  S L+VG RV +     SC  C  CK  +   C +
Sbjct: 57  WGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTK 116

Query: 128 MRFFGSPP------TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP-LSVGVHACRRAN 180
                S P      + G  A+ V         +P+N+ +E   + E  +        + +
Sbjct: 117 FVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGD 176

Query: 181 VGPETNVMI 189
           V     ++ 
Sbjct: 177 VRYRFTLVG 185

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 92.7 bits (229), Expect = 4e-23
 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K L +Q   +P      V ++++A G+C SDVH  + +  +     +  VK P+ +GHE 
Sbjct: 11  KPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI 70

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
           AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A  
Sbjct: 71  AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEY 129

Query: 144 VVHPA-KLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGPET 185
           V+ P  K  YKL     +    M  E  +  +            
Sbjct: 130 VIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQ 173

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 89.1 bits (220), Expect = 1e-21
 Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 27/180 (15%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           + L  + + +  +    + V I + G+CGSDVH          R  +  V  P+++GHE 
Sbjct: 15  QPLVYKEFEISDIPRGSILVEILSAGVCGSDVH--------MFRGEDPRVPLPIILGHEG 66

Query: 84  AGIIEEVGSEVKSLEVGD-----RVALEPGISCGHCSLCKAG-SYNLCPEMRFFG----- 132
           AG + EV  E + L          +    GI+CG C  CK      LCP  + +G     
Sbjct: 67  AGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGC 126

Query: 133 --SPPTNGSLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMI 189
              P   G  + H V+ P     K+ + ++        PL     A           V++
Sbjct: 127 SEYPHLRGCYSSHIVLDPETDVLKVSEKITHR-----LPLKEANKALELMESREALKVIL 181

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 88.8 bits (219), Expect = 2e-21
 Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 30/189 (15%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K L I+   +      +++++I A G+C +D++H        +         P+V+GHE 
Sbjct: 19  KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYH--------LFEGKHKDGFPVVLGHEG 70

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------- 134
           AGI+E VG  V   + G++V       CG C  C++   N C +     SP         
Sbjct: 71  AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETR 130

Query: 135 -----------PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHAC-RRANV 181
                          + +   V       K+  +V L+E      PL     A     + 
Sbjct: 131 FTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHG 190

Query: 182 GPETNVMIM 190
                V+ +
Sbjct: 191 KCIRTVLSL 199

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 87.7 bits (216), Expect = 3e-21
 Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 11/169 (6%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
             L+I+   +P  GP  V V+I+A G+C +D+H  +                P + GHE 
Sbjct: 16  APLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE-------GDWPVKPPLPFIPGHEG 68

Query: 84  AGIIEEVGSEVKSLEVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
            G +  VGS V  ++ GDRV +     +CG C  C  G   LC   +       NG  A 
Sbjct: 69  VGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-GYSVNGGYAE 127

Query: 143 KVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHACRRANVGPETNVMIM 190
            V+        LP NV         + ++  +   R   +     V+ M
Sbjct: 128 YVLADPNYVGILPKNVKATIHPGKLDDINQILDQMRAGQIEGRI-VLEM 175

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 85.4 bits (210), Expect = 2e-20
 Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 11/169 (6%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           + LKI+    PT+   +V VRIKA G+C +D+H                 K P++ GHE 
Sbjct: 11  EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAA-------HGDWPVKPKLPLIPGHEG 63

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISC-GHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
            GI+EEVG  V  L+VGDRV +    S  GHC  C +G   LC   +       +G  A 
Sbjct: 64  VGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-GYSVDGGYAE 122

Query: 143 KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
                A    K+PDN  +E     E ++       +  +     V+ + 
Sbjct: 123 YCRAAADYVVKIPDNTIIEV-QPLEKINEVFDRMLKGQINGRV-VLTLE 169

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 84.5 bits (208), Expect = 6e-20
 Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 31/176 (17%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K L I+   +      +V+++I A  +C +D +        T+  A+     P+++GH  
Sbjct: 17  KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLSGADPEGCFPVILGHLG 68

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
           AGI+E VG  V  L+ GD V       CG C  C     NLC ++R              
Sbjct: 69  AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSR 128

Query: 137 -------------NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 179
                          + +   V       K+   + ++E       ++      +A
Sbjct: 129 FTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFV---THNLSFDEINKA 181

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 83.5 bits (205), Expect = 9e-20
 Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 18/167 (10%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           + L+         GP DVK+ I   G+C SD+H         +R        P V GHE 
Sbjct: 11  QPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQ--------VRSEWAGTVYPCVPGHEI 62

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
            G +  VG +V+    GD V +   + SC HC  C+ G  N C  M    + PT     H
Sbjct: 63  VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGH 122

Query: 143 -------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVG 182
                  ++V   +   ++       E    + ++       R +V 
Sbjct: 123 TLGGYSQQIVVHERYVLRIRVA--DIEMIRADQINEAYERMLRGDVK 167

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 83.8 bits (206), Expect = 1e-19
 Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 36/180 (20%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
             L I+   +      +V++++ A  +C +D++                   P+V+GHEC
Sbjct: 19  SPLCIEEIEVSPPKACEVRIQVIATCVCPTDIN---------ATDPKKKALFPVVLGHEC 69

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
           AGI+E VG  V + + GD+V       C  C LC +   NLC ++R F  P         
Sbjct: 70  AGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMED 129

Query: 137 -----------------NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 179
                              S +   V       ++ D   L+        ++   +   A
Sbjct: 130 RTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV---THALPFESINDA 186

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 79.0 bits (193), Expect = 4e-18
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 8/164 (4%)

Query: 24  KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHE 82
           K L+I+    P L G  DV VRI   G+C +D+H  +      M       K P  +GHE
Sbjct: 10  KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQ-----GMWHELLQPKLPYTLGHE 64

Query: 83  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
             G IEEV   V+ LE GD V L P ++ G C  C+AG    C  + F G    +G  A 
Sbjct: 65  NVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAE 123

Query: 143 KVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHACRRANVGPET 185
            +    +   KLP +V +E      + ++  +    +  V    
Sbjct: 124 FMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVLGRA 167

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 77.7 bits (190), Expect = 1e-17
 Identities = 44/191 (23%), Positives = 64/191 (33%), Gaps = 21/191 (10%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
              +LGI  L       P  G  D  VR  A+  C SD+H         +       +K 
Sbjct: 3   GFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHT--------VFEGALGDRKN 54

Query: 77  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP----EMRFFG 132
           M++GHE  G + EVGSEVK  + GDRV +            +AG            +F  
Sbjct: 55  MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114

Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS 192
                      V         LP +V L +      +  G      A       +++M  
Sbjct: 115 FKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTH--VYHGFDHIEEA-------LLLMKD 165

Query: 193 GPIGLVTLLAA 203
            P  L+  +  
Sbjct: 166 KPKDLIKAVVI 176

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 74.5 bits (182), Expect = 3e-16
 Identities = 38/179 (21%), Positives = 61/179 (34%), Gaps = 35/179 (19%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
           K   I+   +      +V++++ A GIC SD H               +   P++ GHE 
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHV---------VSGTLVTPLPVIAGHEA 69

Query: 84  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------- 134
           AGI+E +G  V ++  GD+V       CG C +CK    N C +                
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129

Query: 135 -----------PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVG 182
                          + +   V       K+    +L      +PL   V    + N G
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFAL------DPLITHVLPFEKINEG 182

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 73.8 bits (180), Expect = 3e-16
 Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 16/200 (8%)

Query: 16  MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK 74
           +AA         ++Q   +      +V V++ A G+C +D+          +R   + V 
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLI---------VRDQKYPVP 55

Query: 75  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 134
            P V+GHE +GIIE +G  V  L+VGD V L  G     C+ C  G+   C E       
Sbjct: 56  LPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCG-KCTQCNTGNPAYCSEFFGR--- 111

Query: 135 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR--ANVGPETNVMIMGS 192
             +G+ +            + ++    + +         +   +   +   +  V     
Sbjct: 112 NFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAF 171

Query: 193 GPIGLVTLLAARAFGAPRII 212
             I    + + +      II
Sbjct: 172 DEINQAAIDSRKGITLKPII 191

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 69.9 bits (170), Expect = 6e-15
 Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 5/145 (3%)

Query: 158 VSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 216
           + LE   M  + ++ G H    A++   ++V+++G G +GL+ +  A+  GA RII    
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 217 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 276
               +  A+  GA +      + ++   +   ++   G G+D      G  +T+S A+  
Sbjct: 61  RPICVEAAKFYGATDI----LNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKM 116

Query: 277 TRPGGKVCLIGLAKTEMTVALTPAA 301
            +PGG +  I    +   + +    
Sbjct: 117 VKPGGIISNINYHGSGDALLIPRVE 141

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 70.3 bits (171), Expect = 7e-15
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 19/153 (12%)

Query: 164 AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 223
            + + L  G H    A VGP + V + G+GP+GL    +AR  GA  +I+ D++  RL+ 
Sbjct: 6   CLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH 65

Query: 224 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------K 268
           A+  G +      +    +   +  +       +D + D VGF+                
Sbjct: 66  AKAQGFEIA--DLSLDTPLHEQIAALLG--EPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121

Query: 269 TMSTALNATRPGGKVCLIGLAKTEMTVALTPAA 301
            +++ +  TR  GK+ + GL  TE   A+  AA
Sbjct: 122 VLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA 154

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 59.6 bits (143), Expect = 3e-11
 Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 13/178 (7%)

Query: 158 VSLEEGAMCEPLSVGV----HACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRI 211
           +S E+     PL+        A ++A   + P   V I+G G +G + +   +      +
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60

Query: 212 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 271
           I  DV  ++L +A  LGAD       D          ++   G G++V+ D VG   T+ 
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARRDPVKQV-----MELTRGRGVNVAMDFVGSQATVD 115

Query: 272 TALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK 328
                    G++ ++G    E+        + EV   G            +     GK
Sbjct: 116 YTPYLLGRMGRLIIVG-YGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 58.4 bits (140), Expect = 9e-11
 Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 5/183 (2%)

Query: 156 DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 215
           D++ +   AMC   +                V+I G+GP+GL  ++ AR+ GA  +I+  
Sbjct: 1   DDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIA 60

Query: 216 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 275
               RL +A  +GAD T        +            G G D   +  G  + +     
Sbjct: 61  GSPNRLKLAEEIGADLTLNRRETSVEERRKAIM-DITHGRGADFILEATGDSRALLEGSE 119

Query: 276 ATRPGGKVCLIGLAKTEMTVALTPAAA---REVDVIGIFRY-RSTWPLCIEFLRSGKIDV 331
             R GG   + G+A  +  V          +     GI+    S +   +         +
Sbjct: 120 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL 179

Query: 332 KPL 334
             L
Sbjct: 180 SKL 182

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 57.3 bits (137), Expect = 2e-10
 Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 8/162 (4%)

Query: 172 GVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230
           G  A    A V P +   + G G +GL  ++  +  GA RII  D++ ++   A+ LGA 
Sbjct: 16  GYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 75

Query: 231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 290
           +        + V      I      G+D S DC G  +T+  A++ T  G   C +  AK
Sbjct: 76  DCLNPRELDKPVQDV---ITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK 132

Query: 291 TEMTVALTPAAAREVDVIGIF----RYRSTWPLCIEFLRSGK 328
            +     T        + G F    +   + P  +   ++ K
Sbjct: 133 VDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 56.9 bits (136), Expect = 3e-10
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 11/159 (6%)

Query: 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 236
           + A V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E     
Sbjct: 22  KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV--- 78

Query: 237 TDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 295
            + +D    + ++   M + G+D SF+ +G   TM TAL+  +    V +I     +   
Sbjct: 79  -NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQN 137

Query: 296 ALTPAA--AREVDVIGI----FRYRSTWPLCIEFLRSGK 328
                          G     F+ + + P  +    + K
Sbjct: 138 LSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 53.1 bits (126), Expect = 4e-09
 Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 17/180 (9%)

Query: 160 LEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 214
           L++      L  G+      A   A + P +   + G G +GL  ++  +  GA RII  
Sbjct: 3   LDKVC---LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGV 59

Query: 215 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 274
           D++  + + A+  GA E        + +      +      G+D SF+C+G  K M  AL
Sbjct: 60  DINKDKFARAKEFGATECINPQDFSKPIQE---VLIEMTDGGVDYSFECIGNVKVMRAAL 116

Query: 275 NATRPG-GKVCLIGLAKTEMTVALTPAA-AREVDVIGIF----RYRSTWPLCIEFLRSGK 328
            A   G G   ++G+A +   +A  P          G      +   + P  +    S K
Sbjct: 117 EACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 52.3 bits (124), Expect = 9e-09
 Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 160 LEEGAM--CEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 216
           L+   +  C  +S G  A    A V P +   + G G +GL  ++   + GA RII  D+
Sbjct: 3   LDTVCLLGC-GVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 217 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 276
           +  +   A+  GA +   V+ +           +   G G+D S +CVG    M  AL +
Sbjct: 62  NPDKFEKAKVFGATDF--VNPNDHSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALES 118

Query: 277 TRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGI----FRYRSTWPLCIEFLRSGK 328
              G  V ++        VA  P          G     F+ +   P  ++     K
Sbjct: 119 CLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 37/163 (22%), Positives = 57/163 (34%), Gaps = 9/163 (5%)

Query: 172 GVHA-CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230
           G  A    A V P +   + G G +G   ++  +A GA RII       +   A  LGA 
Sbjct: 15  GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 74

Query: 231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP-GGKVCLIGLA 289
           E        + +      I      G+D + +C G  +TM  AL +T    G   ++GLA
Sbjct: 75  ECLNPKDYDKPIYE---VICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLA 131

Query: 290 KTEMTVALTPAA-AREVDVIGIF---RYRSTWPLCIEFLRSGK 328
                + L P        + G              ++     K
Sbjct: 132 SPNERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKK 174

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 50.3 bits (119), Expect = 4e-08
 Identities = 22/174 (12%), Positives = 43/174 (24%), Gaps = 32/174 (18%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECA 84
           ++ ++      L    V +++   GI   D    K      +     ++      G    
Sbjct: 17  SVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGG--NIVREYPLILGIDAAGTVV- 73

Query: 85  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 144
                                       +      G   +        S      L+   
Sbjct: 74  --------------------------SSNDPRFAEGDEVIATSYELGVSRDG--GLSEYA 105

Query: 145 VHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 198
             P      LP N+SL+E  + + L++           P     I+ +   G V
Sbjct: 106 SVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRV 158

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 48.9 bits (115), Expect = 1e-07
 Identities = 38/173 (21%), Positives = 62/173 (35%), Gaps = 11/173 (6%)

Query: 158 VSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 215
           V   E A  +C  ++V     ++ N  P   V I G G +G V +  ARA G   +   D
Sbjct: 1   VEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAID 58

Query: 216 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 275
           +D  +L +AR LGA  T     +                 G          +     A+ 
Sbjct: 59  IDDAKLELARKLGASLTVNARQEDPVEA------IQRDIGGAHGVLVTAVSNSAFGQAIG 112

Query: 276 ATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 327
             R GG + L+GL   +    +     + + + G     R+     ++F   G
Sbjct: 113 MARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 3e-07
 Identities = 31/162 (19%), Positives = 61/162 (37%), Gaps = 10/162 (6%)

Query: 169 LSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 227
            S G  A  +   V P +  ++ G G +GL  ++  ++ GA RII  D++  +   A  +
Sbjct: 14  FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 73

Query: 228 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC-LI 286
           GA E        + +      +    G+ +  +F+ +G  +TM  AL +         ++
Sbjct: 74  GATECISPKDSTKPI---SEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVV 130

Query: 287 GLAKTEMTVALTP-AAAREVDVIGIF----RYRSTWPLCIEF 323
           G+  +   +   P          G      + R   P  +  
Sbjct: 131 GVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTE 172

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 46.0 bits (108), Expect = 8e-07
 Identities = 22/182 (12%), Positives = 41/182 (22%), Gaps = 37/182 (20%)

Query: 15  NMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCAN 70
              A+++       T  +Q   +  L   DV VR+    +   D               +
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGL---------ASIPD 53

Query: 71  FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF 130
             + K              V S+      GD V                          +
Sbjct: 54  GKIVKTYPFVPGIDLAGVVVSSQHPRFREGDEVIA----------------------TGY 91

Query: 131 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMI 189
                  G  +       +    LP  +      +    L   +    R  +   T V+ 
Sbjct: 92  EIGVTHFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRT-VVR 150

Query: 190 MG 191
           + 
Sbjct: 151 LA 152

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 44.2 bits (103), Expect = 5e-06
 Identities = 28/175 (16%), Positives = 51/175 (29%), Gaps = 16/175 (9%)

Query: 161 EEGAMCEPLSVGV----HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 216
           E+ A   PL           R    GP   V ++G G +G + +          ++    
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGI-KLAHAMGAHVVAFTT 62

Query: 217 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 276
              +   A+ LGADE          V++       A     D   + V     +      
Sbjct: 63  SEAKREAAKALGADEV---------VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 277 TRPGGKVCLIGL-AKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI 329
            +  G + L+G  A    +  +     +   + G            ++F     I
Sbjct: 114 LKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI 168

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 40.6 bits (94), Expect = 5e-05
 Identities = 25/168 (14%), Positives = 39/168 (23%), Gaps = 35/168 (20%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
           + A LL    G     +Q      L   DV V +    +   D                 
Sbjct: 1   LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAI-------TGKGKI 53

Query: 72  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
           I   PM+ G + AG +                               AG   L       
Sbjct: 54  IRNFPMIPGIDFAGTVRTS----------------------EDPRFHAGQEVLLTGWGVG 91

Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 179
                 G LA +          +P   + +E ++ E  +         
Sbjct: 92  --ENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIINNQ 137

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} Length = 324

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 12/120 (10%)

Query: 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARN-----LGA 229
               ++ P   V+  GSG  G ++L  ++A G+  R+I  +V      +A+        +
Sbjct: 91  LSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDS 149

Query: 230 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-----KTMSTALNATRPGGKVC 284
            + + V    ++VD     I  A      ++FD V  D      T+       + GG   
Sbjct: 150 WKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCA 209

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 38.1 bits (87), Expect = 6e-04
 Identities = 24/190 (12%), Positives = 57/190 (30%), Gaps = 20/190 (10%)

Query: 158 VSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG--SGPIGLVTLLAARAFGAPRIII 213
           +++ +GA     PL+  +       + P  +  I    +  +G       +      I +
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 214 TDVDVQRLSIARNLGADETAKV----STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269
                    +  +L      +V      +  +    + +     G    ++ +CVG  K+
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG-GKS 119

Query: 270 MSTALNATRPGGKVCLI-GLAKTEMTVALTPAAAREVDVIGIF----------RYRSTWP 318
            +         G +    G++   +T+  +    +     G +             ST  
Sbjct: 120 STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLN 179

Query: 319 LCIEFLRSGK 328
             I +   GK
Sbjct: 180 QIIAWYEEGK 189

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 11/174 (6%)

Query: 159 SLEEGA-MCEPLSVGVHA-CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 216
             ++GA +  P      A    A V    +V++ G+     +           +I+ T  
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 217 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 276
             +   I    GA E              + KI+  +G         +  +  +S  L+ 
Sbjct: 62  TEEGQKIVLQNGAHEV-----FNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 116

Query: 277 TRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST---WPLCIEFLRSG 327
              GG+V ++G   T + +      A+E  +IG+  + ST   +      L++G
Sbjct: 117 LSHGGRVIVVGSRGT-IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG 169

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 36.6 bits (83), Expect = 0.002
 Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 6/157 (3%)

Query: 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET 232
            A R+A++ P   ++++G+G       +      +   II     +     A+  GAD  
Sbjct: 18  RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV 77

Query: 233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 292
              S      D      +     G+D   D    +KT+S    A    GK  ++GL   +
Sbjct: 78  INASMQ----DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD 133

Query: 293 MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK 328
           +          E+  +G     +S +   +    +GK
Sbjct: 134 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 35.4 bits (80), Expect = 0.003
 Identities = 21/171 (12%), Positives = 46/171 (26%), Gaps = 38/171 (22%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
           G + L+   +        +++V  KA+GI   D +         +R   +          
Sbjct: 11  GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTY---------IRSGLYPPPSLPSGLG 61

Query: 82  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
                                       + G  S   +G  ++    R   +    G+ +
Sbjct: 62  TE--------------------------AAGIVSKVGSGVKHIKAGDRVVYAQSALGAYS 95

Query: 142 HKVVHPAKLCYKLPDNVSLEEG-AMCEPLSVGV--HACRRANVGPETNVMI 189
                 A     LP  + ++       PL      H    +     ++++I
Sbjct: 96  SVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	366
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.97
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.97
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.97
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.97
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.97
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.96
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.96
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.93
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.92
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.92
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.91
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.91
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.91
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.91
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.9
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.9
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.9
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.89
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.89
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.89
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.88
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.86
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.81
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.8
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.63
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.62
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.43
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.16
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.1
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	98.02
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.99
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.88
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.79
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.76
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.76
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.67
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.66
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.64
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.53
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.47
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.37
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.36
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.34
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.2
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.09
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.09
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.07
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.04
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.02
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.01
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.99
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.99
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.98
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.97
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.95
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.93
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.86
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.83
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.83
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.79
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.76
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.72
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.71
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.69
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.67
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.66
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.64
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.64
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.62
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.61
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.61
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	96.6
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	96.6
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.57
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.57
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.55
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.53
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.52
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.52
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.51
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.46
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.46
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.41
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.41
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.4
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.36
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.36
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.35
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.32
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.32
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.31
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.3
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.29
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.28
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.26
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.23
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.22
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.21
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.2
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.17
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.16
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.13
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.11
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.09
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.07
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.03
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.03
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.01
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	95.95
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.95
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.91
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.88
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.77
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	95.74
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.73
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	95.66
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	95.66
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.65
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.64
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	95.61
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.58
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.58
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	95.56
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.51
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	95.48
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.45
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.4
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	95.29
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.26
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.23
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.15
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.13
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.09
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.08
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.08
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.07
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.03
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.02
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.97
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.95
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	94.93
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.89
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	94.8
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	94.8
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.74
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.73
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.71
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.58
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	94.54
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.52
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	94.5
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	94.49
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.38
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.3
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.27
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.21
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.16
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	94.15
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	94.13
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.12
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.11
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.11
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.08
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.07
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.07
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.02
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.98
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	93.94
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.87
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	93.79
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.58
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	93.51
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	93.45
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.44
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.43
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	93.42
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	93.35
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.34
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.24
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	93.22
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	93.04
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.96
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.88
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	92.85
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	92.83
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.68
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.64
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.64
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	92.28
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.27
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.26
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	92.22
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	92.15
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.07
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.06
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	92.01
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.92
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.76
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	91.68
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	91.53
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	91.51
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.5
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.49
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.48
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.48
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.46
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.2
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	91.17
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.16
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.07
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	90.99
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	90.96
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.95
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	90.94
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.92
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	90.87
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	90.87
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	90.87
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	90.86
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	90.85
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	90.82
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.78
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	90.77
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	90.71
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	90.57
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.48
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.41
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	90.17
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.16
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.16
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.11
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	89.88
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	89.88
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.8
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.74
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.68
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.65
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	89.61
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	89.54
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.51
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.48
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	89.42
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	89.33
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.3
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	89.28
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.27
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.24
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	89.19
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	89.09
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	89.02
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.89
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.85
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	88.77
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	88.74
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	88.56
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	88.45
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	88.19
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	88.19
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	88.11
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.07
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	87.89
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	87.89
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	87.88
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	87.72
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.66
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	87.54
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.52
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	87.48
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.34
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.33
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	87.19
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	87.01
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	86.86
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.83
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.8
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	86.78
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.77
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	86.59
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.52
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.5
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	86.48
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	86.43
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.3
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	86.29
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	86.26
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	86.02
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.92
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	85.8
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.76
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	85.61
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	85.6
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	85.56
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.49
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.39
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.38
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.24
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	85.07
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	85.07
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	84.92
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	84.88
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	84.83
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	84.77
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	84.71
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.66
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.59
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	84.43
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	84.39
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	84.33
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	84.27
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.16
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.1
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	83.98
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	83.98
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	83.78
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	83.72
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	83.66
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	83.53
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	83.49
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	83.23
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	83.14
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	83.1
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.06
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	83.03
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.94
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	82.9
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	82.71
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.12
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	82.02
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	82.0
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.91
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.84
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	81.6
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	81.54
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	81.53
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	81.45
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	81.32
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	81.17
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.96
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.95
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	80.88
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	80.77
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	80.76
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	80.74
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	80.38
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	80.18
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	80.1

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=2.9e-37  Score=254.88  Aligned_cols=173  Identities=40%  Similarity=0.780  Sum_probs=159.2

Q ss_pred             cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      .+++|++.+++.++++++|.|+|+++|||||++++|||++|++++++...     .......|+++|||++|+|+++|++
T Consensus         1 ~~maAVl~g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~-----~~~~~~~p~i~GhE~~G~Vv~vG~~   75 (178)
T d1e3ja1           1 DNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRI-----ADFIVKDPMVIGHEASGTVVKVGKN   75 (178)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBS-----SSCBCCSCEECCCEEEEEEEEECTT
T ss_pred             CceEEEEEcCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCcc-----ccccccCCeeeccccceEEEecCcc
Confidence            36889999999999999999999999999999999999999999885322     2234567899999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  172 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a  172 (366)
                      +++|++||||++.+..+|+.|..|..++.++|++..+.+....+|+|+||++++++.++++|+++++++|+.+. .+.||
T Consensus        76 v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta  155 (178)
T d1e3ja1          76 VKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQT  155 (178)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGH
T ss_pred             cCCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHH
Confidence            99999999999999999999999999999999999999888889999999999999999999999999998884 88999


Q ss_pred             HHHHHhCCCCCCCEEEEEC
Q 017793          173 VHACRRANVGPETNVMIMG  191 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G  191 (366)
                      |++++++++++|++|||+|
T Consensus       156 ~~a~~~~~~~~g~~VlVig  174 (178)
T d1e3ja1         156 VDAFEAARKKADNTIKVMI  174 (178)
T ss_dssp             HHHHHHHHHCCTTCSEEEE
T ss_pred             HHHHHHhCCCCCCEEEEEc
Confidence            9999999999999999987

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-36  Score=246.89  Aligned_cols=176  Identities=42%  Similarity=0.757  Sum_probs=158.1

Q ss_pred             cccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      .+.++++++++|+.++++++|.|+|+++||||||.++|||++|++++++..     .+.....+|+++|||++|+|+++|
T Consensus         5 ~p~~~a~V~~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~-----~~~~~~~~p~i~GhE~~G~V~~vG   79 (185)
T d1pl8a1           5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGR-----IGNFIVKKPMVLGHEASGTVEKVG   79 (185)
T ss_dssp             CCCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSE-----ETTEECSSCEECCCEEEEEEEEEC
T ss_pred             CCCCEEEEEeCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhcccc-----ccccCCCCCeeeeeeeeeeEEEec
Confidence            346789999999999999999999999999999999999999999988432     123346789999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV  171 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~  171 (366)
                      +++++|++||||++.+..+|+.|.+|+.|+++.|+...+++....+|+|+||++++.++++++|+++++++|++. ++++
T Consensus        80 ~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~-pl~~  158 (185)
T d1pl8a1          80 SSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF-PLEK  158 (185)
T ss_dssp             TTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE-EGGG
T ss_pred             cceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH-HHHH
Confidence            999999999999999999999999999999999999999988888999999999999999999999999988764 5667


Q ss_pred             HHHHHHhCCCCCCCEEEEECCCH
Q 017793          172 GVHACRRANVGPETNVMIMGSGP  194 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~g~  194 (366)
                      |+++++..++++|++||| |+|+
T Consensus       159 a~~a~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         159 ALEAFETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             HHHHHHHHHTTCCSEEEE-ECCT
T ss_pred             HHHHHHHhCCCCCCEEEE-EeCC
Confidence            888888888899999998 5554

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.8e-34  Score=240.19  Aligned_cols=169  Identities=24%  Similarity=0.374  Sum_probs=145.7

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        13 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      ++|+||++..+ ++|+++++|.|+|++||||||+.++|||++|+++++         +.+..++|+++|||++|+|+++|
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~---------G~~~~~~P~i~GHE~~G~V~~vG   72 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRD---------QKYPVPLPAVLGHEGSGIIEAIG   72 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHT---------TSSCCCSSBCCCCEEEEEEEEEC
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhh---------hcccccCCcccccceEEEeeecC
Confidence            46899999977 589999999999999999999999999999999998         44556789999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC----------------------CCCCcceEEEEecCC
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----------------------PTNGSLAHKVVHPAK  149 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g~~~e~~~~~~~  149 (366)
                      +++++|++||||+..+ .+|++|.+|+.+++++|++.......                      ...|+|+||++++..
T Consensus        73 ~~v~~~~vGDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~  151 (194)
T d1f8fa1          73 PNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSREN  151 (194)
T ss_dssp             TTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGG
T ss_pred             ccceeEccCceeeeec-ccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehH
Confidence            9999999999996654 58999999999999999985322110                      023799999999999


Q ss_pred             ceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 017793          150 LCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT  214 (366)
Q Consensus       150 ~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v  214 (366)
                      .++++|++++++++                       ++|.|+|++|++|+|+++.+|+.+|+++
T Consensus       152 ~~~~ip~~i~~~~~-----------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         152 NTVKVTKDFPFDQL-----------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             GEEEECTTCCGGGG-----------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             HEEECCCCCCcccE-----------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            99999999886544                       4556899999999999999999777775

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.4e-33  Score=232.01  Aligned_cols=172  Identities=27%  Similarity=0.381  Sum_probs=150.8

Q ss_pred             CCcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793           10 GDKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE   88 (366)
Q Consensus        10 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   88 (366)
                      .+|.+|||+++.++ ++++++++|.|.|++|||||||.++|||++|++.++|.+       .....+|+++|||++|+|+
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~-------~~~~~~P~i~GhE~~G~V~   73 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDW-------PVKPPLPFIPGHEGVGYVA   73 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCS-------SSCCCSSBCCCSCEEEEEE
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCc-------cccccCCcCCCCcceEEEE
Confidence            47899999999987 469999999999999999999999999999999999532       1225679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch
Q 017793           89 EVGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE  167 (366)
Q Consensus        89 ~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~  167 (366)
                      ++|+++++|++||||.+.+. ..|+.|.+|..++.+.|+.....+. ..+|+|+||++++++.++++|++++++.++.+.
T Consensus        74 ~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~-~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~  152 (175)
T d1llua1          74 AVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLADPNYVGILPKNVKATIHPGKL  152 (175)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTCCCCEEEECG
T ss_pred             EeCCCccccccCCEEEeccccccCCccccccCCccccccccccccc-ccccccceEEEechHHEEECCCCCChhHHHHHH
Confidence            99999999999999998765 4799999999999999999888875 578999999999999999999999988777554


Q ss_pred             -hhHHHHHHHHhCCCCCCCEEEEE
Q 017793          168 -PLSVGVHACRRANVGPETNVMIM  190 (366)
Q Consensus       168 -~~~~a~~~l~~~~~~~~~~vlI~  190 (366)
                       .+.++++.++.+.+ +|++|||+
T Consensus       153 ~~~~t~~~~~~~g~~-~G~~VLVl  175 (175)
T d1llua1         153 DDINQILDQMRAGQI-EGRIVLEM  175 (175)
T ss_dssp             GGHHHHHHHHHTTCC-SSEEEEEC
T ss_pred             hHHHHHHHHHHhCCC-CCCEEEeC
Confidence             77788887776654 69999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=2.1e-33  Score=229.51  Aligned_cols=167  Identities=32%  Similarity=0.496  Sum_probs=149.0

Q ss_pred             eEEEEeeC-CceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           16 MAAWLLGI-KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        16 ~~~~~~~~-~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      ||+++.++ ++++++++|.|++ +++||||||.|+|||++|++++.|.....     ....+|+++|||++|+|+++|++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~-----~~~~~P~v~GhE~~G~V~~vG~~   75 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHEL-----LQPKLPYTLGHENVGYIEEVAEG   75 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHH-----HCCCSSEECCCCEEEEEEEECTT
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccc-----cCCccccccceeeeeeeecccCC
Confidence            68888877 4699999999986 78999999999999999999988543221     22467999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc-hhhHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVG  172 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~-~~~~~a  172 (366)
                      +++|++||||++.+..+|+.|..|+.+++++|++..+.+. ..+|+|+||+.++.+.++++|++++++.++++ .+++||
T Consensus        76 v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta  154 (171)
T d1h2ba1          76 VEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDV  154 (171)
T ss_dssp             CCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHH
T ss_pred             CCcCCCCCEEEEcCccCCCCccccccccccccccccccee-ecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHH
Confidence            9999999999999999999999999999999999888775 56899999999999999999999999877755 588999


Q ss_pred             HHHHHhCCCCCCCEEEE
Q 017793          173 VHACRRANVGPETNVMI  189 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI  189 (366)
                      +++++.+++ .|++|||
T Consensus       155 ~~al~~~~~-~G~~VlI  170 (171)
T d1h2ba1         155 LERLEKGEV-LGRAVLI  170 (171)
T ss_dssp             HHHHHTTCC-SSEEEEE
T ss_pred             HHHHHhcCC-CCCEEEe
Confidence            999998888 8999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=3.5e-33  Score=233.95  Aligned_cols=171  Identities=25%  Similarity=0.328  Sum_probs=150.1

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        12 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      ++++|||++..+ .+++++++|.|+|++|||+|||.|+|||++|++.+.|.        .....+|.++|||++|+|+++
T Consensus         6 ~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~--------~~~~~~p~i~GhE~~G~v~~v   77 (199)
T d1cdoa1           6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEG--------KHKDGFPVVLGHEGAGIVESV   77 (199)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTT--------CCTTSCSEECCCCEEEEEEEE
T ss_pred             ceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhc--------ccccccccccccccceEEEEE
Confidence            466789999887 57999999999999999999999999999999998842        234567999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCC--------------------CCCcceEEEEecCCc
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP--------------------TNGSLAHKVVHPAKL  150 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~e~~~~~~~~  150 (366)
                      |+++++|++||||++.+..+|+.|.+|+.+.+++|++........                    .+|+|+||++++.+.
T Consensus        78 G~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~  157 (199)
T d1cdoa1          78 GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIA  157 (199)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGG
T ss_pred             cCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHH
Confidence            999999999999999999999999999999999998754442211                    149999999999999


Q ss_pred             eEECCCCCCccccccch-hhHHHHHHHHh-CCCCCCCEEEEE
Q 017793          151 CYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIM  190 (366)
Q Consensus       151 ~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~  190 (366)
                      ++++|+++++++++++. ++.+++.+++. ...+.|++|||+
T Consensus       158 ~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         158 VAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             EEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999987764 78899999965 678899999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=2e-33  Score=236.38  Aligned_cols=171  Identities=24%  Similarity=0.363  Sum_probs=148.5

Q ss_pred             cCCcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793            9 EGDKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus         9 ~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      +.-+++|||+++.++ ++++++++|.|+|+++||||||.++|||++|+++++         |.++..+|+++|||++|+|
T Consensus         3 ~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~---------G~~~~~~P~v~GHE~~G~V   73 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATD---------PKKKALFPVVLGHECAGIV   73 (202)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTC---------TTSCCCSSBCCCCEEEEEE
T ss_pred             CCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceee---------eecccccccccccccceEE
Confidence            345678999999988 579999999999999999999999999999999988         4555678999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC------------------------CCCCcceEE
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------------------------PTNGSLAHK  143 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~g~~~e~  143 (366)
                      +++|+++++|++||||++.+...|+.|.+|..+++++|+....++..                        ...|+|+||
T Consensus        74 ~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey  153 (202)
T d1e3ia1          74 ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY  153 (202)
T ss_dssp             EEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSE
T ss_pred             eeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEE
Confidence            99999999999999999999999999999999999999986655431                        124899999


Q ss_pred             EEecCCceEECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEE
Q 017793          144 VVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIM  190 (366)
Q Consensus       144 ~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~  190 (366)
                      +++++..++++|++++++.+++.. ++.+++.+++.  +|+|++|.|+
T Consensus       154 ~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi  199 (202)
T d1e3ia1         154 TVVSEANLARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTI  199 (202)
T ss_dssp             EEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEE
T ss_pred             EEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEE
Confidence            999999999999999998777654 56666666654  4689998875

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.8e-33  Score=231.32  Aligned_cols=167  Identities=26%  Similarity=0.474  Sum_probs=145.7

Q ss_pred             CcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      |++++||++++++ ++++++++|.|+|+++||||||.++|||++|+++++|..        ...++|+++|||++|+|++
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~--------~~~~~P~vlGHE~~G~V~~   72 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGED--------PRVPLPIILGHEGAGRVVE   72 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCC--------TTCCSSBCCCCEEEEEEEE
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccC--------CccccccccceeeeeeeeE
Confidence            6788999999988 469999999999999999999999999999999999431        1246899999999999999


Q ss_pred             eCCCCCC-----CCCCCEEEEcCCcCCCCCccccCCC-CCCCCCccccCCC-------CCCCcceEEEEec-CCceEECC
Q 017793           90 VGSEVKS-----LEVGDRVALEPGISCGHCSLCKAGS-YNLCPEMRFFGSP-------PTNGSLAHKVVHP-AKLCYKLP  155 (366)
Q Consensus        90 vG~~v~~-----~~~Gd~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~g~~~e~~~~~-~~~~~~~P  155 (366)
                      +|++|++     +++||+|.+.+..+|++|.+|+.++ ++.|++..+++..       ..+|+|+||++++ ++.++++|
T Consensus        73 vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip  152 (184)
T d1vj0a1          73 VNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVS  152 (184)
T ss_dssp             ESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEEC
T ss_pred             EeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECC
Confidence            9999864     6899999999999999999999996 6779998877642       3589999999996 57999999


Q ss_pred             CCCCccccccchhhHHHHHHHHhCCCCCCCEEEEE
Q 017793          156 DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIM  190 (366)
Q Consensus       156 ~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~  190 (366)
                      +++++++     ++++|+++++++++++|++|||+
T Consensus       153 ~~l~~~~-----pl~~A~~a~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         153 EKITHRL-----PLKEANKALELMESREALKVILY  182 (184)
T ss_dssp             TTCCEEE-----EGGGHHHHHHHHHHTSCSCEEEE
T ss_pred             CCCCHHH-----HHHHHHHHHHHhCCCcCCEEEEe
Confidence            9999764     34567888888899999999997

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=1.7e-32  Score=225.92  Aligned_cols=173  Identities=31%  Similarity=0.455  Sum_probs=147.6

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |||+++..+ ++++++++|.|+|++|||+||++++|||++|+++++|.+...........++|+|+|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            799999988 4699999999999999999999999999999999997654433333444678999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC-ceEECCCCCCccccccc-hhhHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMC-EPLSV  171 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~-~~~~~P~~~~~~~aa~~-~~~~~  171 (366)
                      +++|++||||.+.+..+|+.|.+|+.++.+.|++..+++. ..+|+|+||++++.. .++++|+..+.+.|+.. .++++
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~-~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~  159 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE  159 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHH
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcceeee-ccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988875 578999999999755 46666665554444443 47889


Q ss_pred             HHHHHHhCCCCCCCEEEE
Q 017793          172 GVHACRRANVGPETNVMI  189 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI  189 (366)
                      +++++..+++ .|++|||
T Consensus       160 a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         160 AIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHhhcc-cCCceEC
Confidence            9999988876 5899997

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.97  E-value=2.7e-32  Score=227.62  Aligned_cols=171  Identities=22%  Similarity=0.274  Sum_probs=146.8

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV   90 (366)
Q Consensus        12 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   90 (366)
                      .++||||++.++ ++|+++++|.|+|+++||||||.++|||++|+++++|.        .....+|+++|||++|+|+++
T Consensus         4 ~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~--------~~~~~~p~v~GhE~~G~V~~v   75 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--------DPEGCFPVILGHLGAGIVESV   75 (197)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTC--------CTTCCSSBCCCCEEEEEEEEE
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCC--------cccccccccCCcceeeEEEee
Confidence            356999999988 67999999999999999999999999999999999953        234568999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCcceEEEEecCCc
Q 017793           91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKL  150 (366)
Q Consensus        91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~e~~~~~~~~  150 (366)
                      |++|+++++||||++.+..+|+.|.+|..++..+|+.......                    ...+|+|+||+++++..
T Consensus        76 G~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~  155 (197)
T d2fzwa1          76 GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS  155 (197)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             cCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHH
Confidence            9999999999999999999999999999999999987433210                    01148999999999999


Q ss_pred             eEECCCCCCccccccch-hhHHHHHHHHh-CCCCCCCEEEEE
Q 017793          151 CYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIM  190 (366)
Q Consensus       151 ~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~  190 (366)
                      ++++|+++++++||.+. ++.+++.++++ ..-+.+++|||+
T Consensus       156 ~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         156 VAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             EEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             EEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999998775 78888888854 233578888874

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.97  E-value=4.9e-35  Score=244.62  Aligned_cols=181  Identities=26%  Similarity=0.383  Sum_probs=148.8

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-------CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTL-------GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~-------~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      +||+++.+++.++++++|.|++       +++||+|||.++|||++|+++++         +..+..+|+++|||++|+|
T Consensus         2 ~kA~v~~~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~---------G~~~~~~P~v~GHE~~G~V   72 (201)
T d1kola1           2 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR---------GRTTAQVGLVLGHEITGEV   72 (201)
T ss_dssp             EEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHT---------TCSCCCTTCBCCCCEEEEE
T ss_pred             cEEEEEeCCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhc---------CCcccccceeccceeeeee
Confidence            6899999999999999998864       56999999999999999999998         5556678999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---------CCCCCCCcceEEEEecC--CceEECCC
Q 017793           88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---------GSPPTNGSLAHKVVHPA--KLCYKLPD  156 (366)
Q Consensus        88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g~~~e~~~~~~--~~~~~~P~  156 (366)
                      +++|++|++|++||||.+.+..+|++|.+|+.++++.|......         .....+|+|+||++++.  ..++++|+
T Consensus        73 v~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd  152 (201)
T d1kola1          73 IEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPD  152 (201)
T ss_dssp             EEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSC
T ss_pred             eccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCC
Confidence            99999999999999999999999999999999998888764321         12346799999999985  36999999


Q ss_pred             CCCccccccc-hhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC
Q 017793          157 NVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA  208 (366)
Q Consensus       157 ~~~~~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~  208 (366)
                      +.+..+++.+ .+++++++++.....+.+    ++|+|++|++++|+||++|+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         153 RDKAMEKINIAEVVGVQVISLDDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHHHHHTCCHHHHHTEEEECGGGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            8555555444 466666666644433333    25899999999999999886

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=1.1e-31  Score=219.98  Aligned_cols=167  Identities=32%  Similarity=0.503  Sum_probs=145.9

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |||+++.++ ++++++++|.|+|++|||||||+++|||++|++++++..       .....+|+++|||++|+|+++|++
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~-------~~~~~~p~v~GhE~~G~Vv~vG~~   73 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDW-------PVKPKLPLIPGHEGVGIVEEVGPG   73 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCS-------SSCCCSSBCCCSCEEEEEEEECTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeeccc-------ccccccccccCCEEEEEEEEeccc
Confidence            789999986 569999999999999999999999999999999887431       233567999999999999999999


Q ss_pred             CCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHH
Q 017793           94 VKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG  172 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a  172 (366)
                      ++++++||||++.+. ..|+.|..|..+..++|....+.+. ..+|+|+||+++++++++++|++++++.|++ .++.++
T Consensus        74 v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~A~l-~~~~~~  151 (171)
T d1rjwa1          74 VTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNTIIEVQPL-EKINEV  151 (171)
T ss_dssp             CCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTCCEEEEEG-GGHHHH
T ss_pred             ccCceeeeEEeeccccccccccccccCCCccccccccccce-eccCccccceEecHHHEEECCCCCCHHHHHH-HHHHHH
Confidence            999999999998664 4689999999999999999887775 5689999999999999999999999876654 577788


Q ss_pred             HHHHHhCCCCCCCEEEEEC
Q 017793          173 VHACRRANVGPETNVMIMG  191 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G  191 (366)
                      ++.+.++.+ +|++|||+|
T Consensus       152 ~~~~~~~~~-~G~tVlViG  169 (171)
T d1rjwa1         152 FDRMLKGQI-NGRVVLTLE  169 (171)
T ss_dssp             HHHHHTTCC-SSEEEEECC
T ss_pred             HHHHHhcCC-CCCEEEEeC
Confidence            888877766 499999987

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.4e-31  Score=221.77  Aligned_cols=172  Identities=23%  Similarity=0.359  Sum_probs=148.4

Q ss_pred             CcccceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEE
Q 017793           11 DKNQNMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII   87 (366)
Q Consensus        11 ~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   87 (366)
                      .|++||+.++.++   ..+++++.+.++++++|||||+.|+|||++|++++.|..        ....+|+++|||++|+|
T Consensus         3 ~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~--------~~~~~P~i~GHE~~G~V   74 (192)
T d1piwa1           3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW--------GNMKMPLVVGHEIVGKV   74 (192)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTT--------SCCCSSEECCCCEEEEE
T ss_pred             CCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCC--------CCCCCCcCcccccccch
Confidence            4688999999877   357888877667899999999999999999999888431        23567999999999999


Q ss_pred             EEeCCCC-CCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCC
Q 017793           88 EEVGSEV-KSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVS  159 (366)
Q Consensus        88 ~~vG~~v-~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~  159 (366)
                      +++|+++ +.+++||||.+.+.. +|+.|.+|..+.+++|++..+..      +...+|+|+||++++++.++++|++++
T Consensus        75 v~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~  154 (192)
T d1piwa1          75 VKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIW  154 (192)
T ss_dssp             EEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCC
T ss_pred             hhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCC
Confidence            9999988 569999999887754 79999999999999999876653      234579999999999999999999999


Q ss_pred             ccccccchh-hHHHHHHHHhCCCCCCCEEEEE
Q 017793          160 LEEGAMCEP-LSVGVHACRRANVGPETNVMIM  190 (366)
Q Consensus       160 ~~~aa~~~~-~~~a~~~l~~~~~~~~~~vlI~  190 (366)
                      +++|+.+.+ +.+||+++++++++++++|||.
T Consensus       155 ~e~Aal~~~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         155 VETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            998887764 6789999999999999999985

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=4e-33  Score=232.90  Aligned_cols=170  Identities=22%  Similarity=0.361  Sum_probs=142.9

Q ss_pred             CcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           11 DKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        11 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      ..-+||||++..+ ++++++++|.|+|+++||||||.|+|||++|+++++         +..+..+|.++|||++|+|++
T Consensus         5 ~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~---------G~~~~~~P~i~GHE~~G~Vv~   75 (198)
T d1p0fa1           5 KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK---------EIIPSKFPVILGHEAVGVVES   75 (198)
T ss_dssp             SCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHT---------TSSCCCSSBCCCCCEEEEEEE
T ss_pred             CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeee---------eccccccccccceeeeeeeee
Confidence            4568999999988 589999999999999999999999999999999998         444567899999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC--------------------CCCCcceEEEEecCC
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------------------PTNGSLAHKVVHPAK  149 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~e~~~~~~~  149 (366)
                      +|+++++|++||||++.+..+|+.|.+|+.+++++|++..+.+..                    ...|+|+||+++++.
T Consensus        76 ~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~  155 (198)
T d1p0fa1          76 IGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADI  155 (198)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETT
T ss_pred             cCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHH
Confidence            999999999999999999999999999999999999976654321                    124899999999999


Q ss_pred             ceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHH
Q 017793          150 LCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL  197 (366)
Q Consensus       150 ~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~  197 (366)
                      .++++|++++.+.++....        ....++++++|||.|+|++|+
T Consensus       156 ~~~kip~~~~~~~~~~~~~--------~~~~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         156 AVAKIDPKINVNFLVSTKL--------TLDQINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             SEEEECTTSCGGGGEEEEE--------CGGGHHHHHHHTTTSSCSEEE
T ss_pred             HEEECCCCCCHHHHHHhhc--------chhhcCCCCEEEEECCCcceE
Confidence            9999999998776553321        112233445677888888775

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.97  E-value=2.8e-30  Score=216.20  Aligned_cols=170  Identities=22%  Similarity=0.353  Sum_probs=141.7

Q ss_pred             CCcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793           10 GDKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE   88 (366)
Q Consensus        10 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   88 (366)
                      ....+||||++..+ ++++++++|.|+|+++||||||.++|||++|+++++         |..+..+|+++|||++|+|+
T Consensus         4 ~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~---------G~~~~~~P~i~GHE~~G~Vv   74 (198)
T d2jhfa1           4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS---------GTLVTPLPVIAGHEAAGIVE   74 (198)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHH---------TSSCCCSSBCCCCSEEEEEE
T ss_pred             CCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeec---------CCcccccceecccceeEEEE
Confidence            34577999999866 579999999999999999999999999999999999         45566789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC--------------------CCCCcceEEEEecC
Q 017793           89 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------------------PTNGSLAHKVVHPA  148 (366)
Q Consensus        89 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~e~~~~~~  148 (366)
                      ++|++++++++||||++.+..+|+.|..|+.+...+|+........                    ...|+|+||+++++
T Consensus        75 ~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~  154 (198)
T d2jhfa1          75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDE  154 (198)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEG
T ss_pred             ecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCH
Confidence            9999999999999999999999999999999999999986543210                    12489999999999


Q ss_pred             CceEECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEE
Q 017793          149 KLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIM  190 (366)
Q Consensus       149 ~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~  190 (366)
                      ..++++|++++++.++... ++.....+.  ..+++|++|+|+
T Consensus       155 ~~~~~~p~~~~~e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi  195 (198)
T d2jhfa1         155 ISVAKIDAAFALDPLITHVLPFEKINEGF--DLLRSGESIRTI  195 (198)
T ss_dssp             GGEEECCTTSCCGGGEEEEEEGGGHHHHH--HHHHTTCCSEEE
T ss_pred             HHeEECCCCCCHHHHHHHHHHHHhhhhCC--ceeeCCCEEEEE
Confidence            9999999999887665442 333322222  225678988875

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.96  E-value=4e-30  Score=210.21  Aligned_cols=167  Identities=27%  Similarity=0.269  Sum_probs=137.2

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV   94 (366)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   94 (366)
                      ||++++.+++.++++++|.|+|+++||+||++++|||++|++++.+        +.....+|+++|||++|+|+++|+++
T Consensus         1 MKa~v~~~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~--------~~~~~~~P~i~GhE~~G~V~~vG~~v   72 (177)
T d1jqba1           1 MKGFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFE--------GALGDRKNMILGHEAVGEVVEVGSEV   72 (177)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHH--------CTTCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CeEEEEEeCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCccccccc--------CCCCCCCCccCcceeeEEeeeccccc
Confidence            7999999999999999999999999999999999999999987763        33345679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCcceEEEEecC--CceEECCCCCCccccccchhhH
Q 017793           95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPA--KLCYKLPDNVSLEEGAMCEPLS  170 (366)
Q Consensus        95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~~~~--~~~~~~P~~~~~~~aa~~~~~~  170 (366)
                      ++|++||||.+.+..+|++|.+|+.++++.|+.....  -+...+|+|+||++++.  ..++++|+++++++++....  
T Consensus        73 ~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~--  150 (177)
T d1jqba1          73 KDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY--  150 (177)
T ss_dssp             CSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEE--
T ss_pred             ceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHH--
Confidence            9999999999999999999999999999999886432  22346899999999986  36899999999887764421  


Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLV  198 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~  198 (366)
                      +++..+       ++.+||+|+|++|+.
T Consensus       151 ~~~~~~-------~~~vlv~g~gp~gl~  171 (177)
T d1jqba1         151 HGFDHI-------EEALLLMKDKPKDLI  171 (177)
T ss_dssp             ESGGGH-------HHHHHHHHHCCTTCS
T ss_pred             HHHHHh-------cCceEEECCCHHHhh
Confidence            111111       233566666666654

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=6.8e-30  Score=209.36  Aligned_cols=158  Identities=25%  Similarity=0.334  Sum_probs=133.0

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |||+....+ ++|+++++|.|+|++|||||||.++|||++|++++.|.        .....+|+++|||++|+|+++|++
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~--------~~~~~~P~i~GhE~~G~V~~vG~~   72 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSE--------WAGTVYPCVPGHEIVGRVVAVGDQ   72 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCT--------TSCCCSSBCCCCCEEEEEEEECTT
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeee--------eccccccccccccccccchhhccc
Confidence            678887766 68999999999999999999999999999999999843        123567999999999999999999


Q ss_pred             CCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCC-------CCCCCcceEEEEecCCceEECCCCCCcccccc
Q 017793           94 VKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGS-------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM  165 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~  165 (366)
                      |+++++||||.+.+. .+|++|.+|+.+++++|+.+.+...       ...+|+|+||+++++++++++|+...  .++.
T Consensus        73 V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~--~~~~  150 (179)
T d1uufa1          73 VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADI--EMIR  150 (179)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCE--EEEC
T ss_pred             cccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCc--ChhH
Confidence            999999999988764 5899999999999999998654321       13469999999999999999996543  3344


Q ss_pred             chhhHHHHHHHHhCCCC
Q 017793          166 CEPLSVGVHACRRANVG  182 (366)
Q Consensus       166 ~~~~~~a~~~l~~~~~~  182 (366)
                      ..++.++++++.++.++
T Consensus       151 a~~l~~a~~a~~~a~v~  167 (179)
T d1uufa1         151 ADQINEAYERMLRGDVK  167 (179)
T ss_dssp             GGGHHHHHHHHHTTCSS
T ss_pred             hchhHHHHHHHHHhCcc
Confidence            45778899999887765

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=4.3e-28  Score=198.39  Aligned_cols=170  Identities=45%  Similarity=0.781  Sum_probs=155.1

Q ss_pred             CCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          158 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       158 ~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      +|+++||++.++++||+++++.++++|++|||+|+|++|++++|+||..|+ +|++++++++|+++++++|++..++++.
T Consensus         1 VS~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~~~   79 (170)
T d1e3ja2           1 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDP   79 (170)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEeccc
Confidence            578999999899999999999999999999999999999999999999999 8999999999999999999999887766


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCCh
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW  317 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (366)
                      ...+.....+.+....+.++|+||||+|++..++.++++++++|+++.+|.+.....++...++.+++++.|++.+.+++
T Consensus        80 ~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~~~  159 (170)
T d1e3ja2          80 AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDY  159 (170)
T ss_dssp             TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCH
T ss_pred             cccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHHHH
Confidence            66676666677776678899999999999989999999999999999999887767788888999999999999888899


Q ss_pred             HHHHHHHHCCC
Q 017793          318 PLCIEFLRSGK  328 (366)
Q Consensus       318 ~~~~~~l~~g~  328 (366)
                      +++++++++|+
T Consensus       160 ~~ai~li~~Gk  170 (170)
T d1e3ja2         160 PIALEMVASGR  170 (170)
T ss_dssp             HHHHHHHHTTS
T ss_pred             HHHHHHHHcCC
Confidence            99999999985

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.8e-28  Score=198.16  Aligned_cols=170  Identities=44%  Similarity=0.789  Sum_probs=155.1

Q ss_pred             CCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          158 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       158 ~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      +|+++||...++++||++++++++++|++|+|+|+|++|++++|+|+..|+++|++++.+++|+++++++|++.++++..
T Consensus         1 vS~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   80 (171)
T d1pl8a2           1 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK   80 (171)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccc
Confidence            57899998889999999999999999999999999999999999999999988999999999999999999999887544


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCCh
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW  317 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (366)
                        .+.....+.+....+.++|++|||+|++..++.++++++++|+++.+|.+.....++...++.+++++.|++.+.+++
T Consensus        81 --~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~~  158 (171)
T d1pl8a2          81 --ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW  158 (171)
T ss_dssp             --CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCH
T ss_pred             --cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhHH
Confidence              455556666666668899999999999999999999999999999999888777888888999999999999888899


Q ss_pred             HHHHHHHHCCCC
Q 017793          318 PLCIEFLRSGKI  329 (366)
Q Consensus       318 ~~~~~~l~~g~~  329 (366)
                      +++++++++|++
T Consensus       159 ~~al~li~~gki  170 (171)
T d1pl8a2         159 PVAISMLASKSV  170 (171)
T ss_dssp             HHHHHHHHTTSC
T ss_pred             HHHHHHHHcCCC
Confidence            999999999998

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.4e-28  Score=194.71  Aligned_cols=143  Identities=20%  Similarity=0.286  Sum_probs=122.8

Q ss_pred             cceEEEEe---eCCceEEE-EecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           14 QNMAAWLL---GIKTLKIQ-PYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        14 ~~~~~~~~---~~~~~~~~-~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      .|||++++   +|+.++++ ++|.|+|++|||+|||.++|||++|++.++|.+       .....+|.++|||++|+|++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~-------~~~~~~p~i~G~e~~G~V~~   74 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY-------SRKPLLPYTPGSDVAGVIEA   74 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCS-------SCCCCSSBCCCSCEEEEEEE
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCc-------CccccccccCccceeeeeEe
Confidence            47888888   45678885 689999999999999999999999999988532       12245789999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~  168 (366)
                      +|+++++|++||||+..+                           ..+|+|+||++++++.++++|+++++++||+++ .
T Consensus        75 vG~~v~~~~vGdrV~~~~---------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~  127 (150)
T d1yb5a1          75 VGDNASAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLE  127 (150)
T ss_dssp             ECTTCTTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGG
T ss_pred             ecceeeccccCccccccc---------------------------cccccccccccccccccccccCCCCHHHHHHhhhh
Confidence            999999999999998642                           357999999999999999999999999999876 6


Q ss_pred             hHHHHHHH-HhCCCCCCCEEEEE
Q 017793          169 LSVGVHAC-RRANVGPETNVMIM  190 (366)
Q Consensus       169 ~~~a~~~l-~~~~~~~~~~vlI~  190 (366)
                      ..++++++ ..++.+.|+++||+
T Consensus       128 ~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         128 KVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             GHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             hhhehhhheEEcCcccCCEEEEC
Confidence            77888876 56788999999984

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=5.1e-27  Score=186.61  Aligned_cols=132  Identities=21%  Similarity=0.232  Sum_probs=113.3

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017793           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR  102 (366)
Q Consensus        23 ~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~  102 (366)
                      |+.|++++.|.|+|++|||+|||+|++||++|+++++|.+        ....+|.++|+|++|+|+++|+++++|++|||
T Consensus        12 pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~--------~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdr   83 (147)
T d1qora1          12 PEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLY--------PPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDR   83 (147)
T ss_dssp             GGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSS--------CCSSSSBCCCSCEEEEEEEECTTCCSCCTTCE
T ss_pred             CceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCC--------CCCcceeeeccccccceeeeeeecccccccce
Confidence            3579999999999999999999999999999999998532        13467899999999999999999999999999


Q ss_pred             EEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcccccc--ch-hhHHHHHHHHhC
Q 017793          103 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CE-PLSVGVHACRRA  179 (366)
Q Consensus       103 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~--~~-~~~~a~~~l~~~  179 (366)
                      |+..                           ....|+|+||++++.+.++++|+++++++|++  ++ ..+++++++.+.
T Consensus        84 V~~~---------------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~  136 (147)
T d1qora1          84 VVYA---------------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILES  136 (147)
T ss_dssp             EEES---------------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHT
T ss_pred             eeee---------------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHh
Confidence            9742                           23479999999999999999999998876543  33 567778887777


Q ss_pred             CCCCCCEEEE
Q 017793          180 NVGPETNVMI  189 (366)
Q Consensus       180 ~~~~~~~vlI  189 (366)
                      ++++|++|||
T Consensus       137 ~~~~G~~VLI  146 (147)
T d1qora1         137 RATQGSSLLI  146 (147)
T ss_dssp             TCCCBCCEEE
T ss_pred             CCCCCCEEEe
Confidence            8999999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=3.5e-26  Score=182.68  Aligned_cols=146  Identities=16%  Similarity=0.083  Sum_probs=116.8

Q ss_pred             ccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           13 NQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        13 ~~~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      .+|||+++++++   .++++++|.|+|++|||||||+|+|||++|++...|.+       ......|+++|+|++|+|++
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~-------~~~~~~p~v~g~e~~G~v~~   74 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDG-------KIVKTYPFVPGIDLAGVVVS   74 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGG-------SSCCSSSBCCCSEEEEEEEE
T ss_pred             CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcc-------cccccccceeeeeeeeeeec
Confidence            468999998763   46688999999999999999999999999998888542       22356799999999999998


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~  168 (366)
                        .+++.|++||+|+.....                      .....+|+|+||+.++++.++++|++++. +||+++ .
T Consensus        75 --~~~~~~~~g~~v~~~~~~----------------------~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a  129 (152)
T d1xa0a1          75 --SQHPRFREGDEVIATGYE----------------------IGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLA  129 (152)
T ss_dssp             --CCSSSCCTTCEEEEESTT----------------------BTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGG
T ss_pred             --cCCCccccCCEEEEecCc----------------------cccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHH
Confidence              567789999999864211                      01235799999999999999999999985 555554 5


Q ss_pred             hHHHHHHH-HhCCCCCCCEEEEEC
Q 017793          169 LSVGVHAC-RRANVGPETNVMIMG  191 (366)
Q Consensus       169 ~~~a~~~l-~~~~~~~~~~vlI~G  191 (366)
                      ..||+.++ .+.+++ |++|||+|
T Consensus       130 ~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         130 ELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             GHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHHHHHHhcCCC-CCEEEEcC
Confidence            56676665 567776 99999975

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=9.8e-26  Score=184.15  Aligned_cols=167  Identities=21%  Similarity=0.315  Sum_probs=140.0

Q ss_pred             CCccccccc-hhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          158 VSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       158 ~~~~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      +|+++|+.+ .+++|||++++++++++|++|||+|+|++|++++|+||.+|+.+|++++++++|+++++++|++.++++.
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~   80 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYK   80 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccccc
Confidence            578999987 5899999999999999999999999999999999999999998899999999999999999999998865


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechH----hhhcCcEEEEeec
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDVIGIFR  312 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~~~  312 (366)
                      .  +++.+.+.++.  .+.|+|++|||+|++..++.++++++++|+++.+|.+.....+++..    ...++.++.++..
T Consensus        81 ~--~~~~~~v~~~t--~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          81 N--GHIEDQVMKLT--NGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             G--SCHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             c--hhHHHHHHHHh--hccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            3  56777776654  47789999999999889999999999999999999776554444322    3446678887754


Q ss_pred             c--CCChHHHHHHHHCCC
Q 017793          313 Y--RSTWPLCIEFLRSGK  328 (366)
Q Consensus       313 ~--~~~~~~~~~~l~~g~  328 (366)
                      .  +...+.+.++++.|+
T Consensus       157 ~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCCcccHHHHHHHHHcCC
Confidence            3  345677888888875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=1.8e-25  Score=182.60  Aligned_cols=167  Identities=23%  Similarity=0.338  Sum_probs=148.2

Q ss_pred             CCccccccch-hhHHHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec
Q 017793          158 VSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  235 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  235 (366)
                      +|+.+||++. ...|||+++++.+++++++|||+| +|++|++++|+++..|...|++++.+++|.++++++|++.++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            4778898886 678899999999999999999999 59999999999999998789999999999999999999998885


Q ss_pred             CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-C
Q 017793          236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-R  314 (366)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  314 (366)
                      +  .+++.+.+++..  .+.++|++|||+|++..++.++++++++|+++.+|....+.+++...++.+++++.|++.+ +
T Consensus        81 ~--~~~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~  156 (170)
T d1jvba2          81 S--MQDPLAEIRRIT--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ  156 (170)
T ss_dssp             T--TSCHHHHHHHHT--TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCH
T ss_pred             C--CcCHHHHHHHHh--hcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCH
Confidence            4  356766665543  4678999999999988899999999999999999988877888888899999999999886 6


Q ss_pred             CChHHHHHHHHCCC
Q 017793          315 STWPLCIEFLRSGK  328 (366)
Q Consensus       315 ~~~~~~~~~l~~g~  328 (366)
                      ++++++++|+++|+
T Consensus       157 ~d~~~~l~lv~~GK  170 (170)
T d1jvba2         157 SDFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            77999999999986

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.93  E-value=1.2e-24  Score=177.34  Aligned_cols=166  Identities=25%  Similarity=0.398  Sum_probs=137.6

Q ss_pred             Cccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          159 SLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       159 ~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      ++++||++. .+.|+|+++ +.+++++|++|||+|+|++|++++|+++.+|+.+|++++.+++|+++++++|++.++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            456788776 688999997 569999999999999999999999999999998999999999999999999999998875


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeechHhhhcCcEEEEeecc--
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--  313 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--  313 (366)
                      ..+.......+.   +.++|+|++|||+|.+..++.++++++++ |+++.+|.......++...+++ +.++.|++.+  
T Consensus        82 ~~~~~~~~~~~~---~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 ELDKPVQDVITE---LTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGW  157 (174)
T ss_dssp             GCSSCHHHHHHH---HHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGC
T ss_pred             cchhhhhhhHhh---hhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCC
Confidence            544333333333   24789999999999999999999999996 9999999887776777666544 5688888654  


Q ss_pred             --CCChHHHHHHHHCCC
Q 017793          314 --RSTWPLCIEFLRSGK  328 (366)
Q Consensus       314 --~~~~~~~~~~l~~g~  328 (366)
                        .+++.++++++++||
T Consensus       158 ~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         158 KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHCcC
Confidence              456778888888875

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.92  E-value=8e-25  Score=179.12  Aligned_cols=166  Identities=23%  Similarity=0.412  Sum_probs=142.4

Q ss_pred             CCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec
Q 017793          158 VSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  235 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  235 (366)
                      ++++.|+.+. ...|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.++++++.+++|+++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            3567788776 588899997 56899999999999999999999999999999888999999999999999999999886


Q ss_pred             CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhhhcCcEEEEeecc
Q 017793          236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY  313 (366)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~  313 (366)
                      ..  +++.+.++++.   ++++|+||||+|.+..++.++++++++|+++.+|....  ...++...++.+++++.|++.+
T Consensus        81 ~~--~~~~~~i~~~t---~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          81 KT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             TT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CC--cCHHHHHHHHc---CCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            43  67777777664   56999999999999899999999999999999986543  3456777889999999998754


Q ss_pred             ----CCChHHHHHHHHCCC
Q 017793          314 ----RSTWPLCIEFLRSGK  328 (366)
Q Consensus       314 ----~~~~~~~~~~l~~g~  328 (366)
                          +++++++++|+++|+
T Consensus       156 ~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         156 SGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GSCHHHHHHHHHHHHHTTS
T ss_pred             CCChHHHHHHHHHHHHcCC
Confidence                456889999999885

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=3.1e-24  Score=175.22  Aligned_cols=166  Identities=22%  Similarity=0.299  Sum_probs=137.2

Q ss_pred             ccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          160 LEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       160 ~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      +.+||++. .+.|+|+++ +++++++|++|||+|+|++|++++|+||.+|+.+|++++++++|+++++++|++.++++..
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            45677775 788999997 5689999999999999999999999999999989999999999999999999999998765


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcC-CceEEEEcccCCCceeechH-hhhcCcEEEEeecc--
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP-GGKVCLIGLAKTEMTVALTP-AAAREVDVIGIFRY--  313 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~--  313 (366)
                      .+....+..+.   ++++++|++||++|.......++..+.+ +|+++.+|.......++... .+.++.++.|++.+  
T Consensus        82 ~d~~~~~~~~~---~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (174)
T d1p0fa2          82 YDKPIYEVICE---KTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGF  158 (174)
T ss_dssp             CSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             chhHHHHHHHH---hcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCC
Confidence            43333333322   3478999999999999888889888876 59999999877666666543 45677899998743  


Q ss_pred             -CCChHHHHHHHHCCC
Q 017793          314 -RSTWPLCIEFLRSGK  328 (366)
Q Consensus       314 -~~~~~~~~~~l~~g~  328 (366)
                       .++++++++|+++|+
T Consensus       159 ~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         159 KGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CGGGHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHcCC
Confidence             458999999999886

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=2e-25  Score=172.65  Aligned_cols=128  Identities=20%  Similarity=0.183  Sum_probs=109.8

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE   93 (366)
Q Consensus        15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   93 (366)
                      |||+++.++ ++++++++|.|+|+++||+||++|+|||++|+++++|.+       .....+|+++|+|++|+|      
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~-------~~~~~~P~v~G~E~~G~V------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAY-------LTRLHPPFIPGMEVVGVV------   67 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCS-------SSCCCSSBCCCCEEEEEE------
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccc-------cccccceeEeeeeeEEee------
Confidence            788888877 569999999999999999999999999999999988532       122467999999999998      


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793           94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  172 (366)
Q Consensus        94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a  172 (366)
                           +||||+..                            ..+|+|+||+.++++.++++|+++++++||.+. .+.||
T Consensus        68 -----vGd~V~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta  114 (131)
T d1iz0a1          68 -----EGRRYAAL----------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAA  114 (131)
T ss_dssp             -----TTEEEEEE----------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHH
T ss_pred             -----ccceEEEE----------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHH
Confidence                 39999863                            247999999999999999999999999999886 78899


Q ss_pred             HHHHHh-CCCCCCCEEEEE
Q 017793          173 VHACRR-ANVGPETNVMIM  190 (366)
Q Consensus       173 ~~~l~~-~~~~~~~~vlI~  190 (366)
                      |+++.. +  +.|++||++
T Consensus       115 ~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         115 FRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             HHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHhcc--cCCCEEEEC
Confidence            999853 4  558998863

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=9e-25  Score=177.65  Aligned_cols=164  Identities=23%  Similarity=0.316  Sum_probs=143.3

Q ss_pred             CCccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          158 VSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      +|+++||.++ ...|||++++++++++|++|||+|+|++|++++|+||..|+ +|++++++++|+++++++|++.++++.
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~~   79 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNAR   79 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCcccccccc
Confidence            4788999886 67899999999999999999999999999999999999997 899999999999999999999998864


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CC
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RS  315 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  315 (366)
                      .  +++.+.+.+.    ..+++.++++.+++..++.++++|+++|+++.+|.......++...++.+++++.|++.+ ++
T Consensus        80 ~--~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~  153 (166)
T d1llua2          80 Q--EDPVEAIQRD----IGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRA  153 (166)
T ss_dssp             T--SCHHHHHHHH----HSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--hhHHHHHHHh----hcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHH
Confidence            3  5666665543    246777788888888999999999999999999988777788888899999999999876 56


Q ss_pred             ChHHHHHHHHCCC
Q 017793          316 TWPLCIEFLRSGK  328 (366)
Q Consensus       316 ~~~~~~~~l~~g~  328 (366)
                      +++++++++++|.
T Consensus       154 d~~e~l~l~~~Gl  166 (166)
T d1llua2         154 DLQEALDFAGEGL  166 (166)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHCcC
Confidence            8999999999874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.8e-25  Score=180.13  Aligned_cols=163  Identities=23%  Similarity=0.345  Sum_probs=137.5

Q ss_pred             CCccccccch-hhHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeee
Q 017793          158 VSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  234 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  234 (366)
                      +|+++||+++ ++.|||+++. .+++++|++|||+| +|++|++++|+|+.+|+ +++++++++++.++++++|++.+++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5889999886 8899999985 57899999999999 59999999999999999 6888888999999999999999998


Q ss_pred             cCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-
Q 017793          235 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-  313 (366)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-  313 (366)
                      +.+  +++.+.+++..  .+.++|++|||+|+ ..++.++++|+++|+++.+|... ..+++...++.+++++.+++.+ 
T Consensus        80 ~~~--~~~~~~i~~~t--~~~g~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          80 HRE--VNYIDKIKKYV--GEKGIDIIIEMLAN-VNLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             TTS--TTHHHHHHHHH--CTTCEEEEEESCHH-HHHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGG
T ss_pred             ccc--ccHHHHhhhhh--ccCCceEEeecccH-HHHHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecC
Confidence            644  67877776665  47889999999995 58999999999999999998644 4567777888999999998755 


Q ss_pred             --CCChHHHHHHHHCC
Q 017793          314 --RSTWPLCIEFLRSG  327 (366)
Q Consensus       314 --~~~~~~~~~~l~~g  327 (366)
                        .+++++++++++++
T Consensus       154 ~~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         154 STKEEFQQYAAALQAG  169 (174)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence              34577777776654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=5.5e-24  Score=173.39  Aligned_cols=165  Identities=25%  Similarity=0.367  Sum_probs=145.6

Q ss_pred             CCccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          158 VSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      +|+++||+++ ...|||+++++.++++|++|||+|+|++|++++|+++..|+ +|++++++++|.++++++|++.++++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~~   79 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL   79 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceecccc
Confidence            5889999886 67889999999999999999999999999999999999999 799999999999999999999998864


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CC
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RS  315 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  315 (366)
                      .  .++...+++..    .+.+.++++.+++..++.++++++++|+++.+|.......++...++.+++++.|++.+ ++
T Consensus        80 ~--~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~  153 (168)
T d1rjwa2          80 K--EDAAKFMKEKV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK  153 (168)
T ss_dssp             T--SCHHHHHHHHH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--chhhhhccccc----CCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHH
Confidence            4  56777766654    35566667777788999999999999999999988888888888899999999999866 67


Q ss_pred             ChHHHHHHHHCCCC
Q 017793          316 TWPLCIEFLRSGKI  329 (366)
Q Consensus       316 ~~~~~~~~l~~g~~  329 (366)
                      +++++++++++|++
T Consensus       154 ~~~~~l~l~~~Gki  167 (168)
T d1rjwa2         154 DLQEALQFAAEGKV  167 (168)
T ss_dssp             HHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHhCCC
Confidence            89999999999987

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.91  E-value=3.3e-24  Score=175.22  Aligned_cols=163  Identities=23%  Similarity=0.311  Sum_probs=138.2

Q ss_pred             ccccccch-hhHHHHHHHHh-C-CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          160 LEEGAMCE-PLSVGVHACRR-A-NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       160 ~~~aa~~~-~~~~a~~~l~~-~-~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      +.++|+++ +++|||+++++ . .+++|++|||+|+|++|++++|+++..|+.+|++++++++|+++++++|++.++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            45666665 78999999965 3 589999999999999999999999999998899999999999999999999998864


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CC
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RS  315 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  315 (366)
                      +   +..+...+.  +.+.++|++|||+|+...++.++++++++|+++.+|... ..+++...++.+++++.|++.+ .+
T Consensus        86 ~---~~~~~~~~~--~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-~~~~~~~~l~~k~~~i~Gs~~~~~~  159 (172)
T d1h2ba2          86 R---DPVKQVMEL--TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-ELRFPTIRVISSEVSFEGSLVGNYV  159 (172)
T ss_dssp             S---CHHHHHHHH--TTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-CCCCCHHHHHHTTCEEEECCSCCHH
T ss_pred             c---cHHHHHHHh--hCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-cccCCHHHHHhCCcEEEEEEecCHH
Confidence            3   333333332  347789999999999888999999999999999999643 4567778889999999999877 56


Q ss_pred             ChHHHHHHHHCCC
Q 017793          316 TWPLCIEFLRSGK  328 (366)
Q Consensus       316 ~~~~~~~~l~~g~  328 (366)
                      +++++++|+++|+
T Consensus       160 d~~~~l~l~~~GK  172 (172)
T d1h2ba2         160 ELHELVTLALQGK  172 (172)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            7999999999986

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.91  E-value=1.1e-23  Score=172.96  Aligned_cols=167  Identities=23%  Similarity=0.291  Sum_probs=135.8

Q ss_pred             Cccccccch-hhHHHHHHHH-hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          159 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       159 ~~~~aa~~~-~~~~a~~~l~-~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      ++++||.+. .+.|+|+++. ++++++|++|||+|+|++|++++|+++.+|+.+|++++++++|+++++++|++.++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            567888886 6889999985 68999999999999999999999999999998999999999999999999999999886


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC--CCceeechHhhhcCcEEEEeecc-
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAAAREVDVIGIFRY-  313 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~-  313 (366)
                      ....+..+.++.   ..++++|++||++|....+..+...++++|.++.++...  .....+....+.++.++.|++.+ 
T Consensus        82 ~~~~~~~~~~~~---~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          82 DFSKPIQEVLIE---MTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             GCSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhhHHHHHHHH---HcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence            655555444443   347899999999999888899999999998888775433  23334444455678899998765 


Q ss_pred             ---CCChHHHHHHHHCCC
Q 017793          314 ---RSTWPLCIEFLRSGK  328 (366)
Q Consensus       314 ---~~~~~~~~~~l~~g~  328 (366)
                         .+++.++++++++||
T Consensus       159 ~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence               346777888888876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=5.8e-24  Score=175.42  Aligned_cols=165  Identities=23%  Similarity=0.335  Sum_probs=134.6

Q ss_pred             cccccc-hhhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793          161 EEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD  238 (366)
Q Consensus       161 ~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  238 (366)
                      +.+|.+ ....|||+++.+ .++++|++|||+|+|++|++++|+|++.|+.+|++++++++|.++++++|++.++++.. 
T Consensus         4 ~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-   82 (182)
T d1vj0a2           4 DVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE-   82 (182)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT-
T ss_pred             HHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc-
Confidence            344444 367899999954 78999999999999999999999999999988999999999999999999999988654 


Q ss_pred             CcchHHHHHHHHH-hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech---HhhhcCcEEEEeecc-
Q 017793          239 IEDVDTDVGKIQN-AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---PAAAREVDVIGIFRY-  313 (366)
Q Consensus       239 ~~~~~~~~~~~~~-~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~-  313 (366)
                       .++.+..+++.+ +.+.++|+||||+|++..++.++++++++|+++.+|...+..+.+..   .++.+++++.|++.+ 
T Consensus        83 -~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 -TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             -SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             -cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence             344444444333 24678999999999988899999999999999999976554444332   366789999999887 


Q ss_pred             CCChHHHHHHHHCC
Q 017793          314 RSTWPLCIEFLRSG  327 (366)
Q Consensus       314 ~~~~~~~~~~l~~g  327 (366)
                      ..++++++++++++
T Consensus       162 ~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 TSHFVKTVSITSRN  175 (182)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHC
Confidence            56788899988875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.3e-24  Score=176.80  Aligned_cols=162  Identities=19%  Similarity=0.193  Sum_probs=137.9

Q ss_pred             Cccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          159 SLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       159 ~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      +.+.||.+. ...|+|+++++.++++|++|||+|+|++|++++|+||.+|+ +|++++.+++|.++++++|++.++++..
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~~   80 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLE   80 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeeccc
Confidence            345676665 57789999999999999999999999999999999999999 7888999999999999999999988654


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChH--HHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-C
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK--TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-R  314 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  314 (366)
                      + .++.   ++    ...++|.++||++...  .++.++++++++|+++.+|.......++...+..+++++.|+..+ +
T Consensus        81 ~-~~~~---~~----~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  152 (168)
T d1piwa2          81 E-GDWG---EK----YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSI  152 (168)
T ss_dssp             T-SCHH---HH----SCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCH
T ss_pred             h-HHHH---Hh----hhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCH
Confidence            3 2322   12    2568999999988643  367888999999999999988777788888899999999998776 6


Q ss_pred             CChHHHHHHHHCCCC
Q 017793          315 STWPLCIEFLRSGKI  329 (366)
Q Consensus       315 ~~~~~~~~~l~~g~~  329 (366)
                      ++++++++++++|++
T Consensus       153 ~~~~e~l~li~~gkI  167 (168)
T d1piwa2         153 KELNQLLKLVSEKDI  167 (168)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCC
Confidence            789999999999987

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=8.2e-24  Score=166.98  Aligned_cols=127  Identities=19%  Similarity=0.149  Sum_probs=104.8

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG   91 (366)
Q Consensus        15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   91 (366)
                      |||++++++   ..+++++++.|+|++|||+|||+|+|||++|+....|.+       ......|+++|+|++|+|+++|
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~-------~~~~~~p~v~G~e~~G~V~~~~   73 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKG-------KIIRNFPMIPGIDFAGTVRTSE   73 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCS-------SCCCSSSBCCCSEEEEEEEEEC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeec-------ccccccceeccccccccceeec
Confidence            789998865   348889999999999999999999999999999888532       1224678999999999999987


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchh-hH
Q 017793           92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP-LS  170 (366)
Q Consensus        92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~-~~  170 (366)
                      .+  .+++||+|.+.....                      +...+|+|+||+++++++++++|+++|+++||++++ ..
T Consensus        74 ~~--~~~~g~~v~~~~~~~----------------------g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~  129 (146)
T d1o89a1          74 DP--RFHAGQEVLLTGWGV----------------------GENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNF  129 (146)
T ss_dssp             ST--TCCTTCEEEEECTTB----------------------TTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHH
T ss_pred             cC--CccceeeEEeecccc----------------------eecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHH
Confidence            64  789999998642210                      124579999999999999999999999999998873 34


Q ss_pred             HH
Q 017793          171 VG  172 (366)
Q Consensus       171 ~a  172 (366)
                      ||
T Consensus       130 tA  131 (146)
T d1o89a1         130 AE  131 (146)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=4.3e-24  Score=176.50  Aligned_cols=167  Identities=19%  Similarity=0.298  Sum_probs=134.5

Q ss_pred             cccccch-hhHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          161 EEGAMCE-PLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       161 ~~aa~~~-~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      +|||+++ ++.|||+++. .+++++|++|||+| +|++|++++|+|+..|+ +++++.+++++.++++++|++.+++++.
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            4677776 8899999984 57899999999998 69999999999999999 6777778889999999999999988643


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce-eechHhhhcCcEEEEeecc---
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY---  313 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~---  313 (366)
                        +++.+.+++..  .+.++|++|||+|++ .++.++++|+++|+++.+|....... ......+.++.++.+....   
T Consensus        80 --~~~~~~v~~~t--~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          80 --VDFADEILELT--DGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             --STHHHHHHHHT--TTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             --cCHHHHHHHHh--CCCCEEEEEecccch-HHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEcccee
Confidence              67888877664  378999999999974 88999999999999999986543322 2222344677787776532   


Q ss_pred             -------CCChHHHHHHHHCCCCCCCC
Q 017793          314 -------RSTWPLCIEFLRSGKIDVKP  333 (366)
Q Consensus       314 -------~~~~~~~~~~l~~g~~~~~~  333 (366)
                             ++.++++++++++|++++.|
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                   35688899999999996544

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=9.1e-27  Score=191.38  Aligned_cols=162  Identities=17%  Similarity=0.078  Sum_probs=128.8

Q ss_pred             ccceEEEEeeCC----c--eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhccccccc--ccCccCCCCccccccee
Q 017793           13 NQNMAAWLLGIK----T--LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR--CANFIVKKPMVIGHECA   84 (366)
Q Consensus        13 ~~~~~~~~~~~~----~--~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~--~~~~~~~~p~i~G~e~~   84 (366)
                      .++||+++.+++    .  ++..++|.|+|+++||||||++++||++|++.++|.+.....  .+......|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            367888888652    2  445678888999999999999999999999999876533211  22333467899999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccc
Q 017793           85 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA  164 (366)
Q Consensus        85 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa  164 (366)
                      |+|+++|.++++++.||+|....                           ...|+|+||++++++.++++|++++.+.++
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~---------------------------~~~g~~aey~~v~~~~~~~iP~~~~~~~a~  134 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPNPAQSKANG  134 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECCHHHHHHTT
T ss_pred             cccccccccccccccccceeccc---------------------------cccccccceeeehhhhccCCCccchhhhhc
Confidence            99999999999999999998642                           246899999999999999999988766655


Q ss_pred             cchhhHHHHHHHH--hCCCCCCCEEEEEC-C-CHHHHHHHHH
Q 017793          165 MCEPLSVGVHACR--RANVGPETNVMIMG-S-GPIGLVTLLA  202 (366)
Q Consensus       165 ~~~~~~~a~~~l~--~~~~~~~~~vlI~G-~-g~vG~~ai~l  202 (366)
                      .+ ...|||+++.  ..++++|++|||.| + |++|+++||+
T Consensus       135 ~~-~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         135 KP-NGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             CS-CCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             cc-hHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            44 4556777764  36799999999997 4 7799988773

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=1.2e-23  Score=170.98  Aligned_cols=163  Identities=20%  Similarity=0.230  Sum_probs=129.2

Q ss_pred             CCccccccch-hhHHHHHHHH----hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          158 VSLEEGAMCE-PLSVGVHACR----RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l~----~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      +|+++||+++ +..|||++++    .++.++|++|||+| +|++|.+++|+||..|+ +|+++.+++++.++++++|++.
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5889999997 6789997753    47788999999998 79999999999999999 6888889999999999999999


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc-CCCceeechHhhhcCcEEEEe
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-KTEMTVALTPAAAREVDVIGI  310 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~  310 (366)
                      +++++.   .+.+.+   ..+.++++|+|||++|+. .+..++++|+++|+++.+|.. .....++...++.+++++.|.
T Consensus        80 vi~~~~---~~~~~~---~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED---VMAERI---RPLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC---------------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch---hHHHHH---HHhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            998753   222222   233578999999999976 899999999999999999975 445678888999999999997


Q ss_pred             eccC---CChHHHHHHHHCCCC
Q 017793          311 FRYR---STWPLCIEFLRSGKI  329 (366)
Q Consensus       311 ~~~~---~~~~~~~~~l~~g~~  329 (366)
                      ....   +...++++.+ .+.+
T Consensus       153 ~~~~~~~~~~~~~~~~l-ag~l  173 (176)
T d1xa0a2         153 DSVYCPMDLRLRIWERL-AGDL  173 (176)
T ss_dssp             CSSSCCHHHHHHHHHHH-HTTT
T ss_pred             eCCcCCHHHHHHHHHHH-hccc
Confidence            5543   3344445444 3666

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.90  E-value=5.1e-26  Score=183.74  Aligned_cols=148  Identities=18%  Similarity=0.189  Sum_probs=118.0

Q ss_pred             ccceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793           13 NQNMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE   89 (366)
Q Consensus        13 ~~~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   89 (366)
                      +++||++++++   ..+++++++.|++++|||||||+|+|||++|++...|.+       ......|.++|+|++|+|++
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~-------~~~~~~~~~~g~e~~G~v~~   74 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGG-------NIVREYPLILGIDAAGTVVS   74 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTC-------TTCSSCSEECCSEEEEEEEE
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecc-------cccccceeeeeeeccccccc
Confidence            46789999955   469999999999999999999999999999999888532       12245688999999999998


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793           90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  168 (366)
Q Consensus        90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~  168 (366)
                        +.++++++||+|+......                      +...+|+|+||+.++++.++++|+++|+++||.++ .
T Consensus        75 --~~~~~~~~g~~v~~~~~~~----------------------g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~  130 (162)
T d1tt7a1          75 --SNDPRFAEGDEVIATSYEL----------------------GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLL  130 (162)
T ss_dssp             --CSSTTCCTTCEEEEESTTB----------------------TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCST
T ss_pred             --ccccccccceeeEeeeccc----------------------eeccccccceEEEecHHHEEECCCCCCHHHHHHHHHH
Confidence              5667899999998643211                      12457999999999999999999999999999886 4


Q ss_pred             hHHHHHHHHhCCCCCCCEEEEEC
Q 017793          169 LSVGVHACRRANVGPETNVMIMG  191 (366)
Q Consensus       169 ~~~a~~~l~~~~~~~~~~vlI~G  191 (366)
                      ..|||.++...+.+.+++|||+|
T Consensus       131 ~~ta~~~~~~~~~~~~~~Vli~g  153 (162)
T d1tt7a1         131 TIVDREVSLEETPGALKDILQNR  153 (162)
T ss_dssp             TSEEEEECSTTHHHHHHHTTTTC
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEC
Confidence            55676555443344456777776

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.90  E-value=3.3e-23  Score=170.75  Aligned_cols=159  Identities=17%  Similarity=0.234  Sum_probs=127.9

Q ss_pred             cccchhhHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCc
Q 017793          163 GAMCEPLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE  240 (366)
Q Consensus       163 aa~~~~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~  240 (366)
                      +++.++..|||+++. .+++++||+|||+| +|++|++++|+||..|+ +||++++++++.++++++|++.++++..  +
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--~   84 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--V   84 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc--c
Confidence            344457889999995 58999999999998 58999999999999999 7999989999999999999999988643  4


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-------CceeechHhhhcCcEEEEeecc
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-------EMTVALTPAAAREVDVIGIFRY  313 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~  313 (366)
                      ++.+.+.+..  .+.++|+|||++|+ +.++.++++|+++|+++.+|....       ...+....++++++++.|++..
T Consensus        85 ~~~~~~~~~~--~~~Gvd~v~D~vG~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          85 NSLEEALKKA--SPDGYDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             SCHHHHHHHH--CTTCEEEEEESSCH-HHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             cHHHHHHHHh--hcCCCceeEEecCc-hhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            5555554443  47889999999995 589999999999999999985321       2234445688999999998654


Q ss_pred             -------CCChHHHHHHHHCC
Q 017793          314 -------RSTWPLCIEFLRSG  327 (366)
Q Consensus       314 -------~~~~~~~~~~l~~g  327 (366)
                             .+.++++++|+++|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence                   23467778888775

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.90  E-value=2.3e-22  Score=164.70  Aligned_cols=167  Identities=22%  Similarity=0.314  Sum_probs=136.7

Q ss_pred             Cccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          159 SLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       159 ~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      ++++||.+. .+.|+|+++ +.+++++|++|+|+|+|++|.+++++++..|+.+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            567888886 788999998 568999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEE-EEcccCCCceeechHhhhcCcEEEEeecc--
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC-LIGLAKTEMTVALTPAAAREVDVIGIFRY--  313 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--  313 (366)
                      ... +..+...+.  +.++++|++||++|+...+..+..++.++|.++ ..+........+....+.++.++.|++.+  
T Consensus        82 ~~~-~~~~~~~~~--~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 DHS-EPISQVLSK--MTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             GCS-SCHHHHHHH--HHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             Ccc-hhHHHHHHh--hccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            543 333333333  247899999999999888899988887775554 45555556666777777888999998754  


Q ss_pred             --CCChHHHHHHHHCCC
Q 017793          314 --RSTWPLCIEFLRSGK  328 (366)
Q Consensus       314 --~~~~~~~~~~l~~g~  328 (366)
                        +++++++++|+++|+
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence              467889999999885

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=2.5e-23  Score=172.50  Aligned_cols=169  Identities=14%  Similarity=0.210  Sum_probs=134.4

Q ss_pred             CCccccccch-hhHHHHHHHHh-CCCCCCCEEEEE-C-CCHHHHHHHHHHHHCCCCeEEEEcCC----hhHHHHHHHcCC
Q 017793          158 VSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIM-G-SGPIGLVTLLAARAFGAPRIIITDVD----VQRLSIARNLGA  229 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~-G-~g~vG~~ai~la~~~g~~~vv~v~~~----~~~~~~~~~lg~  229 (366)
                      +|+++||+++ .+.|||+++.. .++++|++++|+ | +|++|++++|+||.+|+ ++|++.++    +++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            5789999887 89999999964 789999999997 5 69999999999999999 55554333    345677899999


Q ss_pred             ceeeecCC-CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCceeechHhhhcCcEE
Q 017793          230 DETAKVST-DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDV  307 (366)
Q Consensus       230 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~  307 (366)
                      +.+++++. +..++.+.++++....++++|++||++|++ .+..++++|+++|+++.+|... ....++...++++++++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEE
Confidence            99998753 234566667776666688999999999965 7889999999999999998544 44567778888999999


Q ss_pred             EEeecc----------CCChHHHHHHHHCCC
Q 017793          308 IGIFRY----------RSTWPLCIEFLRSGK  328 (366)
Q Consensus       308 ~~~~~~----------~~~~~~~~~~l~~g~  328 (366)
                      .|++..          .+.++++++|+++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            998643          234667777777764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.3e-23  Score=170.83  Aligned_cols=161  Identities=19%  Similarity=0.214  Sum_probs=130.2

Q ss_pred             Cccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793          159 SLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  237 (366)
Q Consensus       159 ~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  237 (366)
                      +++.+|.+. ...|+|+++++.++++|++|||+|+|++|++++|+||.+|+ ++++++.+++++++++++|++.++++..
T Consensus         5 ~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~~~   83 (168)
T d1uufa2           5 QLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN   83 (168)
T ss_dssp             GHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC
T ss_pred             cHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEECch
Confidence            455566554 46689999999999999999999999999999999999999 5667888999999999999999988643


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-CC
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RS  315 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~  315 (366)
                      .  +.   .    ....+++|++||++|++..++.++++++++|+++.+|..... ..++...++.+++++.|++.+ .+
T Consensus        84 ~--~~---~----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~  154 (168)
T d1uufa2          84 A--DE---M----AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP  154 (168)
T ss_dssp             H--HH---H----HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHH
T ss_pred             h--hH---H----HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHH
Confidence            2  11   1    112578999999999887899999999999999999975543 345666788899999999876 67


Q ss_pred             ChHHHHHHHHCCCC
Q 017793          316 TWPLCIEFLRSGKI  329 (366)
Q Consensus       316 ~~~~~~~~l~~g~~  329 (366)
                      +++++++++.+++|
T Consensus       155 d~~e~l~l~a~~~I  168 (168)
T d1uufa2         155 ETQEMLDFCAEHGI  168 (168)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCC
Confidence            89999999988764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=2.1e-23  Score=169.94  Aligned_cols=144  Identities=24%  Similarity=0.422  Sum_probs=119.0

Q ss_pred             CCccccccch-hhHHHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec
Q 017793          158 VSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  235 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  235 (366)
                      +++++||+++ ++.|||++++++++++|++|||+| +|++|++++|+||..|+ +|+++++++++.++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeeeh
Confidence            5789999886 789999999989999999999998 59999999999999999 78888889999999999999999886


Q ss_pred             CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc
Q 017793          236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY  313 (366)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  313 (366)
                      .    +.   ..+..  .+.++|+|||++| + .++.++++++++|+++.+|...+ ..+++...++.+++++.|++..
T Consensus        80 ~----~~---~~~~~--~~~g~D~v~d~~G-~-~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          80 A----EV---PERAK--AWGGLDLVLEVRG-K-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             G----GH---HHHHH--HTTSEEEEEECSC-T-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             h----hh---hhhhh--ccccccccccccc-h-hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence            3    22   22232  3678999999988 3 57899999999999999997653 4467777889999999998754

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.89  E-value=4e-22  Score=163.38  Aligned_cols=167  Identities=22%  Similarity=0.279  Sum_probs=133.1

Q ss_pred             Cccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          159 SLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       159 ~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      ++++||++. .+.|+|+++ +.+++++||+|||+|+|++|.+++|+++..|+.+|++++++++|+++++++|++.++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            567888886 689999998 568999999999999999999999999999988999999999999999999999988865


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc-ccCCCc-eeechHhhhcCcEEEEeecc-
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEM-TVALTPAAAREVDVIGIFRY-  313 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~-~~~~~~~~~~~~~~~~~~~~-  313 (366)
                      +.+....+.. +.  +.++++|++||++|.+..+..++..++++|..+.++ ...... .......+.+++++.|++.+ 
T Consensus        82 ~~~~~~~~~~-~~--~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          82 DYKKPIQEVL-TE--MSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             GCSSCHHHHH-HH--HTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             CchhHHHHHH-HH--HhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence            4433333332 22  347799999999999988999999998875555554 444333 33344567789999998754 


Q ss_pred             ---CCChHHHHHHHHCCC
Q 017793          314 ---RSTWPLCIEFLRSGK  328 (366)
Q Consensus       314 ---~~~~~~~~~~l~~g~  328 (366)
                         +++++++++++.+||
T Consensus       159 ~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 FKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCHHHHHHHHHHHHHCcC
Confidence               456788888888875

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3.3e-23  Score=170.50  Aligned_cols=128  Identities=24%  Similarity=0.300  Sum_probs=112.8

Q ss_pred             CCccccccch-hhHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeee
Q 017793          158 VSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  234 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  234 (366)
                      +|+++||+++ .+.|||+++. .+++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.+++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5889999887 7889999996 47899999999997 68899999999999999 7999999999999999999999998


Q ss_pred             cCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          235 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                      +..  +++.+.+++++  .+.++|+++|++|++ .+..++++++++|+++.++....
T Consensus        80 ~~~--~d~~~~v~~~t--~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  131 (179)
T d1qora2          80 YRE--EDLVERLKEIT--GGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSG  131 (179)
T ss_dssp             TTT--SCHHHHHHHHT--TTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             CCC--CCHHHHHHHHh--CCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccccC
Confidence            644  68888887765  478999999999865 78999999999999999886544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=4.9e-22  Score=162.27  Aligned_cols=163  Identities=20%  Similarity=0.301  Sum_probs=130.3

Q ss_pred             Cccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793          159 SLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  236 (366)
Q Consensus       159 ~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  236 (366)
                      ++++||.+. ...|+|+++ +.+++++|++|+|+|+|++|++++|+++..|+.+|++++.+++|+++++++|++.++++.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            578898886 788999998 568999999999999999999999999999988999999999999999999999999875


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeech-HhhhcCcEEEEeecc-
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY-  313 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-  313 (366)
                      +. ....+.+.+.  +.+.|+|++||++|.......++..+.++ |+++.+|.+......... ..++++.++.|++.+ 
T Consensus        83 ~~-~~~~~~~~~~--~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 DS-TKPISEVLSE--MTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG  159 (176)
T ss_dssp             GC-SSCHHHHHHH--HHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             cc-chHHHHHHHH--hccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeC
Confidence            43 2333333333  34789999999999998888888887665 999999977665544443 355678899998765 


Q ss_pred             ---CCChHHHHHHH
Q 017793          314 ---RSTWPLCIEFL  324 (366)
Q Consensus       314 ---~~~~~~~~~~l  324 (366)
                         ++++.++++++
T Consensus       160 ~~~~~dip~li~~~  173 (176)
T d1d1ta2         160 LKSRDDVPKLVTEF  173 (176)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHH
Confidence               34455555554

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=8.4e-22  Score=163.39  Aligned_cols=162  Identities=23%  Similarity=0.342  Sum_probs=130.2

Q ss_pred             cccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcch
Q 017793          163 GAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV  242 (366)
Q Consensus       163 aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~  242 (366)
                      +++..+++|||++++++++++|++|||+|+|++|++++|+|+..|+.+|++++.+++|+++++++|++.++++.  .+++
T Consensus         5 ~~l~d~~~ta~~a~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~--~~~~   82 (195)
T d1kola2           5 TCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSL--DTPL   82 (195)
T ss_dssp             GGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTS--SSCH
T ss_pred             HhcccHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCC--CcCH
Confidence            34445899999999999999999999999999999999999999998999999999999999999999987753  3688


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCC---------------hHHHHHHHHhhcCCceEEEEcccCCCc-------------e
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIGLAKTEM-------------T  294 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~~~~-------------~  294 (366)
                      .+.+.+++  .+.++|++||++|.               ...++.++++++++|+++.+|.+....             .
T Consensus        83 ~~~i~~~t--~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~  160 (195)
T d1kola2          83 HEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLS  160 (195)
T ss_dssp             HHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCC
T ss_pred             HHHHHHHh--CCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCcee
Confidence            88887765  47899999999984               358999999999999999999754322             2


Q ss_pred             eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCC
Q 017793          295 VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK  328 (366)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~  328 (366)
                      ++...++.+++++.+.... ++.++++++++.+++
T Consensus       161 ~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         161 IRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             eeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            2233445667776543322 444677888887764

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=7.1e-22  Score=163.24  Aligned_cols=166  Identities=17%  Similarity=0.242  Sum_probs=123.6

Q ss_pred             CCCccccccchhhHHHHHHHH-hCCCCCC--CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHHcCCce
Q 017793          157 NVSLEEGAMCEPLSVGVHACR-RANVGPE--TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADE  231 (366)
Q Consensus       157 ~~~~~~aa~~~~~~~a~~~l~-~~~~~~~--~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~  231 (366)
                      ++|+.+.|+-++..|||+++. ..++++|  ++|||+| +|++|++++|+||..|+++|+++++++++ .++++++|++.
T Consensus         1 ~~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           1 HLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             CGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             CccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            357777666668999999984 5788887  8899998 69999999999999999888877666655 55667899999


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC---ce--ee-----chHhh
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE---MT--VA-----LTPAA  301 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~--~~-----~~~~~  301 (366)
                      ++++.+  +++.+.++++.   +.|+|+|||++|+ +.++.++++++++|+++.+|..+..   .+  .+     ...+.
T Consensus        81 vi~~~~--~~~~~~~~~~~---~~GvDvv~D~vGg-~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~  154 (187)
T d1vj1a2          81 AVNYKT--GNVAEQLREAC---PGGVDVYFDNVGG-DISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRK  154 (187)
T ss_dssp             EEETTS--SCHHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHH
T ss_pred             Eeeccc--hhHHHHHHHHh---ccCceEEEecCCc-hhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHH
Confidence            999754  57777776663   6789999999996 4889999999999999999853321   11  11     12245


Q ss_pred             hcCcEEEEeecc------CCChHHHHHHHHCCC
Q 017793          302 AREVDVIGIFRY------RSTWPLCIEFLRSGK  328 (366)
Q Consensus       302 ~~~~~~~~~~~~------~~~~~~~~~~l~~g~  328 (366)
                      .+++++.++...      .+.++++.+|+++|+
T Consensus       155 ~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         155 ERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             hcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            678888876432      234667777888775

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=7.8e-20  Score=148.58  Aligned_cols=146  Identities=15%  Similarity=0.193  Sum_probs=117.2

Q ss_pred             CCccccccch-hhHHHHHHH---Hh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          158 VSLEEGAMCE-PLSVGVHAC---RR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l---~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      +|+.+|+.++ +..|||+++   +. ...+++++|||+| +|++|++++|+||.+|+ +||++.+++++.++++++|+|.
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            4778898886 677888665   33 4444567999997 79999999999999999 6888889999999999999999


Q ss_pred             eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEe
Q 017793          232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGI  310 (366)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~  310 (366)
                      ++++..  .++.+.+      .....|.++|++|++ .+..++++|+++|+++.+|.... ..+.+...++.+++++.|+
T Consensus        80 vi~~~~--~~~~~~l------~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE--FAESRPL------EKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG--SSSCCSS------CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc--HHHHHHH------HhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            999754  2332222      245679999999965 89999999999999999996543 5567778889999999997


Q ss_pred             ecc
Q 017793          311 FRY  313 (366)
Q Consensus       311 ~~~  313 (366)
                      +..
T Consensus       151 ~~~  153 (177)
T d1o89a2         151 DSV  153 (177)
T ss_dssp             CSS
T ss_pred             ecc
Confidence            554

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.80  E-value=1.1e-19  Score=146.29  Aligned_cols=134  Identities=20%  Similarity=0.290  Sum_probs=108.9

Q ss_pred             HHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          172 GVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       172 a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +++++. .+..+++++|||+| +|++|++++|+||.+|+ +|+++.++++|.++++++|++.++++....   .+.   +
T Consensus        11 a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~---~~~---~   83 (167)
T d1tt7a2          11 SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---DGT---L   83 (167)
T ss_dssp             HHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---SSC---C
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchh---chh---h
Confidence            335554 45667788999998 69999999999999999 688888999999999999999998864211   111   1


Q ss_pred             HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc
Q 017793          250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY  313 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  313 (366)
                      ....++++|+|||++|++ .++.++++|+++|+++.+|...+ ..++++..++.+++++.|....
T Consensus        84 ~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~  147 (167)
T d1tt7a2          84 KALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSV  147 (167)
T ss_dssp             CSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSS
T ss_pred             hcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecC
Confidence            223467899999999976 88999999999999999996654 5678888899999999997655

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.63  E-value=4.5e-15  Score=115.76  Aligned_cols=120  Identities=14%  Similarity=0.040  Sum_probs=89.6

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV  103 (366)
Q Consensus        24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V  103 (366)
                      +.|++++.++|+|++||||||++|.+++|.......            +.....++..+++|+|++  |+.++|++||+|
T Consensus        20 ~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~------------~~~~g~~~~g~~vg~Vv~--S~~~~f~~GD~V   85 (147)
T d1v3va1          20 SDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK------------RLKEGAVMMGQQVARVVE--SKNSAFPAGSIV   85 (147)
T ss_dssp             GGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG------------GSCTTSBCCCCEEEEEEE--ESCTTSCTTCEE
T ss_pred             cceEEEEEECCCCCCCEEEEEEEEEeEccccccccc------------ccccCCccccceEEEEEE--eCCCcccCCCEE
Confidence            459999999999999999999999999986543222            233444566789999987  677899999999


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcc-----ccccc-hhhHH-HHHHH
Q 017793          104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE-----EGAMC-EPLSV-GVHAC  176 (366)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~-----~aa~~-~~~~~-a~~~l  176 (366)
                      ..                               .++|+||.+++.+.+.++|++++..     ..+.+ ....| ||..+
T Consensus        86 ~g-------------------------------~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl  134 (147)
T d1v3va1          86 LA-------------------------------QSGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM  134 (147)
T ss_dssp             EE-------------------------------CCCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH
T ss_pred             EE-------------------------------ccCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh
Confidence            84                               4679999999999999999775432     22222 24444 45455


Q ss_pred             HhCCCCCCCEEEE
Q 017793          177 RRANVGPETNVMI  189 (366)
Q Consensus       177 ~~~~~~~~~~vlI  189 (366)
                       ...-+.|++||+
T Consensus       135 -~~~~k~Getvv~  146 (147)
T d1v3va1         135 -LNGANLGKAVVT  146 (147)
T ss_dssp             -HTTCCSSEEEEE
T ss_pred             -hCCCCCCCEEEe
Confidence             333578999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=9.6e-14  Score=94.68  Aligned_cols=71  Identities=11%  Similarity=0.199  Sum_probs=61.4

Q ss_pred             CCccccccch-hhHHHHHHH----HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793          158 VSLEEGAMCE-PLSVGVHAC----RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  229 (366)
Q Consensus       158 ~~~~~aa~~~-~~~~a~~~l----~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  229 (366)
                      +|+++|+.+. ...|||.++    +....+++++|||+| +|++|.+++|++|.+|+ +|+++.+++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            5788998886 677887765    336778999999997 69999999999999999 68888899999999999985

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.16  E-value=2.5e-06  Score=65.99  Aligned_cols=97  Identities=20%  Similarity=0.313  Sum_probs=72.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      ++.+|+|+|+|.+|+.|++.|+.+|+ .|.+.|.+.++.+.++......+......    .+.+.+..    ..+|+||.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~----~~~l~~~~----~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSN----SAEIETAV----AEADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECC----HHHHHHHH----HTCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhh----hhhHHHhh----ccCcEEEE
Confidence            56899999999999999999999999 89999999999998887653322111121    12233322    35899999


Q ss_pred             cCCChH------HHHHHHHhhcCCceEEEEcc
Q 017793          263 CVGFDK------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~~~------~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ++-.+.      .-...++.|++|+.++.+..
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             eeecCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence            875432      34567899999999999864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.10  E-value=9.6e-06  Score=63.55  Aligned_cols=101  Identities=19%  Similarity=0.271  Sum_probs=73.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC------------------CcchHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD------------------IEDVDT  244 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~------------------~~~~~~  244 (366)
                      ++.+|+|+|+|-+|+.|+..|+.+|+ .|.+.|.+.++.+.+++++...+-.....                  .....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            46789999999999999999999999 89999999999999999987543110000                  001112


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCChH------HHHHHHHhhcCCceEEEEcc
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGFDK------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~~~------~~~~~~~~l~~~G~~v~~g~  288 (366)
                      .+.+.    -...|+||.++-.+.      .-+..++.|++|+.++.+..
T Consensus       107 ~l~~~----l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         107 AVLKE----LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHHH----HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHH----HHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence            22221    246999999874431      34578899999999999864

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.02  E-value=4.2e-06  Score=68.44  Aligned_cols=106  Identities=16%  Similarity=0.193  Sum_probs=76.3

Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCceeeecCCCCcchHHHH
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~~~~~~~~~~~~~~~  246 (366)
                      +...+++..++++|++||.+|+|. |..++.+++..|. .|++++.+++-.+.    ++++|.+.+.....+.   ....
T Consensus        66 ~~a~ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~---~~g~  140 (215)
T d1jg1a_          66 MVAIMLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDG---SKGF  140 (215)
T ss_dssp             HHHHHHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCC
T ss_pred             hHHHHHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECcc---ccCC
Confidence            334566778899999999999877 8888889988885 68999998765444    4557776654433321   1110


Q ss_pred             HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                           .....||.++.+.+........++.|++||+++..
T Consensus       141 -----~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         141 -----PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             -----GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -----cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence                 12467999988777665567788999999999874

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.99  E-value=8.3e-06  Score=66.78  Aligned_cols=105  Identities=23%  Similarity=0.280  Sum_probs=74.3

Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHH
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~  247 (366)
                      ...++..++++|++||-+|||. |..++.+|+..|. ..|++++.+++..+.+++    .+.+.+.....+   ....+ 
T Consensus        65 a~~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d---~~~~~-  139 (213)
T d1dl5a1          65 ALFMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD---GYYGV-  139 (213)
T ss_dssp             HHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC---GGGCC-
T ss_pred             HHHHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCc---hHHcc-
Confidence            3456778899999999999887 8888899998763 379999999987776654    344433222121   11100 


Q ss_pred             HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                          .....||.|+.+.+-....+..++.|++||+++..
T Consensus       140 ----~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         140 ----PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             ----GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             ----ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence                11356999998776554556788999999999874

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.88  E-value=4e-05  Score=64.40  Aligned_cols=105  Identities=18%  Similarity=0.211  Sum_probs=73.6

Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cC---CceeeecCCCCcchHH
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LG---ADETAKVSTDIEDVDT  244 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg---~~~~~~~~~~~~~~~~  244 (366)
                      ...+...+++||++||=.|+|. |.+++.+|+..|- .++++++.+++..+.+++    ++   .+.+.....   +..+
T Consensus        86 s~Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~  161 (264)
T d1i9ga_          86 AQIVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLAD  161 (264)
T ss_dssp             HHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGG
T ss_pred             HHHHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---cccc
Confidence            3445778999999999999887 8899999999874 489999999998888765    21   222221111   1111


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCC-hHHHHHHHHhhcCCceEEEE
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGF-DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .     ......||.||-.+.. ...+..+.+.|++||+++.+
T Consensus       162 ~-----~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~  199 (264)
T d1i9ga_         162 S-----ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVY  199 (264)
T ss_dssp             C-----CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred             c-----cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEE
Confidence            0     0114569977655554 35788899999999999876

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.79  E-value=3.1e-05  Score=64.64  Aligned_cols=103  Identities=13%  Similarity=0.170  Sum_probs=70.5

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cC-CceeeecCCCCcchHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LG-ADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg-~~~~~~~~~~~~~~~~~~~~  248 (366)
                      .+.+.+++||++||-.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    ++ ...+.....   ++.+.+  
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~---Di~~~~--  150 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---DIADFI--  150 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---CTTTCC--
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe---eeeccc--
Confidence            34678899999999999877 7888889988753 389999999998888765    22 222222222   222111  


Q ss_pred             HHHhhCCCCcEEEEcCCC-hHHHHHHHHhhcCCceEEEEc
Q 017793          249 IQNAMGSGIDVSFDCVGF-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                          ....||.|+-.... ...+..+.+.|+|||+++.+.
T Consensus       151 ----~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         151 ----SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             ----CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ----ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence                14569988754444 356888999999999998763

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.76  E-value=3.3e-05  Score=63.33  Aligned_cols=102  Identities=14%  Similarity=0.165  Sum_probs=71.3

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHH
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ..++..++++|++||-+|+|. |..+..+++.. . +|++++.+++..+.+++.-.  ..+.....   +.....     
T Consensus        61 ~ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~---d~~~g~-----  129 (224)
T d1vbfa_          61 FMLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG---DGTLGY-----  129 (224)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES---CGGGCC-----
T ss_pred             HHHHHhhhcccceEEEecCCC-CHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccC---chhhcc-----
Confidence            456778899999999999885 78888888864 3 79999999998888876422  11111111   111110     


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...+.||.++-+.+.+...+..++.|++||+++..
T Consensus       130 ~~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         130 EEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            01356999987766665667788999999999875

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.76  E-value=4.1e-05  Score=64.62  Aligned_cols=107  Identities=17%  Similarity=0.232  Sum_probs=75.2

Q ss_pred             HHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHH
Q 017793          172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDV  246 (366)
Q Consensus       172 a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~  246 (366)
                      +.+.+...+++||++||=.|+|. |..++.+|+..|. .+|++++.+++..+.+++    ++....+....  .+.... 
T Consensus        92 ~~~Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~--~d~~~~-  167 (266)
T d1o54a_          92 SSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV--RDISEG-  167 (266)
T ss_dssp             HHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC--CCGGGC-
T ss_pred             HHHHHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEe--cccccc-
Confidence            34456788999999999999887 8888899998763 389999999998877754    45432222111  121111 


Q ss_pred             HHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          247 GKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       247 ~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                           .....+|.|+--.+.+ ..+..+.+.|+|||+++.+.
T Consensus       168 -----~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         168 -----FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             -----CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             -----ccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence                 1245688877666654 57889999999999998763

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=4.3e-05  Score=62.84  Aligned_cols=106  Identities=19%  Similarity=0.166  Sum_probs=71.6

Q ss_pred             HHHHHHhC--CCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc-----eeeecCCCC
Q 017793          172 GVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGAD-----ETAKVSTDI  239 (366)
Q Consensus       172 a~~~l~~~--~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~-----~~~~~~~~~  239 (366)
                      ...+++..  ++++|++||-+|+|. |..+..+|+..|. ..|++++.+++-.+.+++    .+..     .+.....  
T Consensus        63 ~a~~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g--  139 (224)
T d1i1na_          63 HAYALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG--  139 (224)
T ss_dssp             HHHHHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES--
T ss_pred             HHHHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe--
Confidence            34455544  789999999999887 8888899998763 489999999987666543    2221     1111111  


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                       +.....     .....||.|+.+.......+..++.|++||+++..
T Consensus       140 -D~~~~~-----~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         140 -DGRMGY-----AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             -CGGGCC-----GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -eccccc-----chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence             111000     01357999998776665667888999999999874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.66  E-value=0.00014  Score=56.78  Aligned_cols=75  Identities=13%  Similarity=0.175  Sum_probs=57.1

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ..++..++.++.+|||+|+|+.+.+++.-++..|++.+.++.++.++.+.+. .++...+...                 
T Consensus         7 ~~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~-----------------   69 (167)
T d1npya1           7 KLIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSL-----------------   69 (167)
T ss_dssp             HHHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCC-----------------
T ss_pred             HHHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcc-----------------
Confidence            4567777778899999999999999999999999988888889998877554 4554332111                 


Q ss_pred             hCCCCcEEEEcCC
Q 017793          253 MGSGIDVSFDCVG  265 (366)
Q Consensus       253 ~~~~~d~vld~~g  265 (366)
                      ....+|++++|.+
T Consensus        70 ~~~~~DliINaTp   82 (167)
T d1npya1          70 ENQQADILVNVTS   82 (167)
T ss_dssp             TTCCCSEEEECSS
T ss_pred             cccchhhheeccc
Confidence            0246899999876

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.64  E-value=0.00043  Score=57.57  Aligned_cols=104  Identities=18%  Similarity=0.221  Sum_probs=72.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+++++...+ .|. ++..+..+.+.+..+.. +++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-G~iDiL   80 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDL-EDERERVRFVEEAAYAL-GRVDVL   80 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCT-TCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeC-CCHHHHHHHHHHHHHhc-CCCCeE
Confidence            588999998 68999999888888999 78889899998888888876543 222 33344444444444332 579999


Q ss_pred             EEcCCCh-------------------------HHHHHHHHhhc--CCceEEEEccc
Q 017793          261 FDCVGFD-------------------------KTMSTALNATR--PGGKVCLIGLA  289 (366)
Q Consensus       261 ld~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~  289 (366)
                      +++.|..                         ...+.++..|.  .+|+++.++..
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~  136 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASV  136 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccc
Confidence            9998753                         13334555664  46888888643

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.53  E-value=4.3e-05  Score=62.71  Aligned_cols=104  Identities=17%  Similarity=0.222  Sum_probs=66.1

Q ss_pred             HHHHhC--CCCCCCEEEEECCCHHHHHHHHHHHHC---CC---CeEEEEcCChhHHHHHHH---------cCCceeeecC
Q 017793          174 HACRRA--NVGPETNVMIMGSGPIGLVTLLAARAF---GA---PRIIITDVDVQRLSIARN---------LGADETAKVS  236 (366)
Q Consensus       174 ~~l~~~--~~~~~~~vlI~G~g~vG~~ai~la~~~---g~---~~vv~v~~~~~~~~~~~~---------lg~~~~~~~~  236 (366)
                      ..++..  +++++++||.+|+|. |..+..+++..   |.   .+|++++.+++-.+.+++         ++...+....
T Consensus        69 ~~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          69 FALEYLRDHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHHTTTTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            455543  799999999999765 65555555544   43   379999998876665543         1222222211


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .+   .....     .....||.|+-+.+-+...+..++.|++||+++..
T Consensus       148 ~d---~~~~~-----~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         148 GD---GRKGY-----PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             SC---GGGCC-----GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cc---ccccc-----ccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            11   11110     11457999988777665667788999999999874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.47  E-value=0.001  Score=51.09  Aligned_cols=73  Identities=16%  Similarity=0.370  Sum_probs=54.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH-HHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      -.+.++||+|+|.+|...++.+...|+..+.++.++.+|. +++++++.. ...+    .++.+.   +     ..+|+|
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~----~~~~~~---l-----~~~Div   88 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF----DELVDH---L-----ARSDVV   88 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG----GGHHHH---H-----HTCSEE
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc----hhHHHH---h-----ccCCEE
Confidence            4678999999999999999998889997788888887765 477778753 2222    122222   2     369999


Q ss_pred             EEcCCCh
Q 017793          261 FDCVGFD  267 (366)
Q Consensus       261 ld~~g~~  267 (366)
                      |.|++.+
T Consensus        89 i~atss~   95 (159)
T d1gpja2          89 VSATAAP   95 (159)
T ss_dssp             EECCSSS
T ss_pred             EEecCCC
Confidence            9999865

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.37  E-value=0.00043  Score=58.74  Aligned_cols=100  Identities=12%  Similarity=0.166  Sum_probs=69.4

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +++.++++|++||=+|||- |..++.+|+..|+ .|++++.+++..+++++    .|...-+.+..  .++.    .   
T Consensus        55 ~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~--~d~~----~---  123 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL--AGWE----Q---  123 (285)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE--SCGG----G---
T ss_pred             HHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH--hhhh----c---
Confidence            3678899999999999876 7889999999998 89999999987777655    33221111111  1221    1   


Q ss_pred             hhCCCCcEEEE-----cCCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFD-----CVGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld-----~~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                       ....+|.++.     .++..   ..+..+.+.|+|+|++++..
T Consensus       124 -~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         124 -FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             -CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence             1456887643     44432   46778889999999988643

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.36  E-value=0.00049  Score=58.56  Aligned_cols=100  Identities=14%  Similarity=0.190  Sum_probs=69.5

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ++++++++|++||=+|||- |-.++.+|+..|+ .|++++.+++..+.+    ++.|....+....  .++.        
T Consensus        54 ~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~~--------  121 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGWE--------  121 (291)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCGG--------
T ss_pred             HHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hccc--------
Confidence            4778999999999999875 5578899998998 899999999875554    4456443222111  1111        


Q ss_pred             hhCCCCcEEEE-----cCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFD-----CVGF----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld-----~~g~----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...+.||.|+.     .++.          +..+..+.+.|+|||++++-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            12467998753     4442          246778899999999998654

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.34  E-value=0.00048  Score=58.37  Aligned_cols=100  Identities=12%  Similarity=0.244  Sum_probs=68.6

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +++.++++|++||=+|||- |..+..+++..|+ .|++++.+++..+.+++    .|....+....  .+..    .   
T Consensus        45 ~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~~----~---  113 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----D---  113 (280)
T ss_dssp             HTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----G---
T ss_pred             HHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhhh----h---
Confidence            3668899999999999875 4567888988898 89999999998777655    34322111111  1111    1   


Q ss_pred             hhCCCCcEEEE-----cCCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFD-----CVGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld-----~~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                       ..+.+|.|+-     .++..   ..+..+.+.|+|+|++++-.
T Consensus       114 -~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         114 -FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             -CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence             1457888843     44432   45778889999999998743

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00055  Score=59.10  Aligned_cols=107  Identities=21%  Similarity=0.274  Sum_probs=69.9

Q ss_pred             HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cC-----------CceeeecCC
Q 017793          174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LG-----------ADETAKVST  237 (366)
Q Consensus       174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg-----------~~~~~~~~~  237 (366)
                      +.+...+++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    ++           .+.+-....
T Consensus        89 ~Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~  167 (324)
T d2b25a1          89 MILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK  167 (324)
T ss_dssp             HHHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred             HHHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec
Confidence            345678899999999999877 8899999998874 389999999998887754    11           111111111


Q ss_pred             CCcchHHHHHHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +-.++...   +.   ...||.||--+..+ ..+..+.+.|+|||+++.+.
T Consensus       168 di~~~~~~---~~---~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         168 DISGATED---IK---SLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             CTTCCC-------------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             chhhcccc---cC---CCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            11111111   11   34588776444432 46788999999999998764

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.09  E-value=0.00071  Score=56.32  Aligned_cols=95  Identities=20%  Similarity=0.318  Sum_probs=64.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .++|++||=.|||. |..++.+++ .|+ +|++++.+++..+.+++    .+....+. .   .+...    ..  ....
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~-~---~d~~~----~~--~~~~  184 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFL-E---GSLEA----AL--PFGP  184 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEE-E---SCHHH----HG--GGCC
T ss_pred             cCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEE-e---ccccc----cc--cccc
Confidence            68999999999875 777776665 687 79999999988777664    44432211 1   12211    11  1457


Q ss_pred             CcEEEEcCCCh---HHHHHHHHhhcCCceEEEEcc
Q 017793          257 IDVSFDCVGFD---KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       257 ~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ||+|+.+....   ..+..+.+.|+|||++++.|.
T Consensus       185 fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         185 FDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cchhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            99999876543   245567788999999987653

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.00094  Score=55.27  Aligned_cols=100  Identities=23%  Similarity=0.266  Sum_probs=68.8

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ...+++||++||=+|||. |..+..+++..|+ +|++++.+++-.+.+++    .|...-+.+..  .++.+    +  .
T Consensus        27 ~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~--~d~~~----~--~   96 (245)
T d1nkva_          27 RVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIH--NDAAG----Y--V   96 (245)
T ss_dssp             HHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCCTT----C--C
T ss_pred             HHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhh--hHHhh----c--c
Confidence            668899999999999876 6678888888887 89999999987766554    45432111111  11111    1  1


Q ss_pred             hCCCCcEEEEcC------CChHHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..+.||+|+..-      .-...+..+.+.|+|||+++..
T Consensus        97 ~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~  136 (245)
T d1nkva_          97 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG  136 (245)
T ss_dssp             CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred             ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence            246799987531      2245778888999999998875

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.07  E-value=0.0029  Score=52.68  Aligned_cols=83  Identities=16%  Similarity=0.214  Sum_probs=54.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+ ++   .+... .  .|. ++..+..+.+.++.+..+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDA-SLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccC-CCHHHHHHHHHHHHHHhC
Confidence            488999998 68999998888888999 788888888776533 22   33221 1  222 223344444444444334


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      +.+|+++++.|..
T Consensus        85 g~idilvnnAG~~   97 (259)
T d1xq1a_          85 GKLDILINNLGAI   97 (259)
T ss_dssp             TCCSEEEEECCC-
T ss_pred             CCccccccccccc
Confidence            6799999998864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.04  E-value=0.0046  Score=51.45  Aligned_cols=83  Identities=13%  Similarity=0.224  Sum_probs=54.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.+....   .|. ++..+..+.+.++.+..+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-SSRSERQELMNTVANHFH   84 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeC-CCHHHHHHHHHHHHHHhC
Confidence            588999998 68999998888888899 788888888776533    23343221   222 223344444444444334


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      ..+|+++++.|..
T Consensus        85 ~~idilvnnAG~~   97 (259)
T d2ae2a_          85 GKLNILVNNAGIV   97 (259)
T ss_dssp             TCCCEEEECCCCC
T ss_pred             CCceEEEECCcee
Confidence            5799999998853

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.02  E-value=0.00051  Score=54.57  Aligned_cols=102  Identities=10%  Similarity=0.025  Sum_probs=67.1

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-e---------ee------cCCCC
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-T---------AK------VSTDI  239 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~---------~~------~~~~~  239 (366)
                      +....++||.+||..|||. |..++.+|+. |+ .|+++|.|++-.+.+++..... .         ..      +..+.
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            3445789999999999987 8899999975 98 8999999999988887632110 0         00      00000


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEEc
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .++...       ....+|.|++...-        ...+..+.+.|+++|++++..
T Consensus        90 ~~l~~~-------~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 FALTAR-------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSSTHH-------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccccc-------cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            111111       12468998874431        235677888999999977643

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.01  E-value=0.00079  Score=55.28  Aligned_cols=100  Identities=16%  Similarity=0.207  Sum_probs=68.1

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      +.+.++||++||=+|||. |..+..+++. +. .|++++.+++-.+.+++    .+.+.+.....+..++.     +   
T Consensus        10 ~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~---   78 (234)
T d1xxla_          10 KTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----F---   78 (234)
T ss_dssp             HHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----S---
T ss_pred             HHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccccc-----c---
Confidence            668899999999999887 8888888885 55 79999999886665543    44433221112111111     1   


Q ss_pred             hCCCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..+.||+|+.+-.-      ...+..+.+.|+|+|+++...
T Consensus        79 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          79 PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            13569999864321      356888999999999988753

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.99  E-value=0.001  Score=54.29  Aligned_cols=102  Identities=19%  Similarity=0.230  Sum_probs=69.4

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHH
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      .++.++++++++||=+|||. |..+..+++. |. .+++++.+++-.+.+++    .+.+.+-....+..++.     + 
T Consensus         7 ll~~~~l~~~~rVLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~-   77 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATGG-GHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F-   77 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCTT-CHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S-
T ss_pred             HHHhcCCCCcCEEEEecccC-cHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccccc-----c-
Confidence            34678899999999999884 8888888865 66 79999999987666543    45443321212222211     0 


Q ss_pred             HhhCCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEc
Q 017793          251 NAMGSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       251 ~~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                        ..+.||+|+..-.     . ...+..+.+.|+|||+++...
T Consensus        78 --~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          78 --TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             --CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence              1356999976432     2 246788999999999998764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.0052  Score=50.57  Aligned_cols=103  Identities=22%  Similarity=0.298  Sum_probs=69.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce---eeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE---TAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ ++++...   ..|. ++..+..+.+.++.+. -+++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNV-TDPASIESVLEKIRAE-FGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHH-TCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEe-cCHHHhhhhhhhhhcc-cCCc
Confidence            478889998 68999998888888999 788888988876644 4555432   1222 2334444444444432 3579


Q ss_pred             cEEEEcCCCh-------------------------HHHHHHHHhh--cCCceEEEEcc
Q 017793          258 DVSFDCVGFD-------------------------KTMSTALNAT--RPGGKVCLIGL  288 (366)
Q Consensus       258 d~vld~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~  288 (366)
                      |+++++.|..                         ...+.++..|  ..+|+++.++.
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS  137 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS  137 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence            9999998654                         1344455565  46799998874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.98  E-value=0.0092  Score=42.55  Aligned_cols=94  Identities=14%  Similarity=0.053  Sum_probs=61.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC--hhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .|.+|||.|+|.+|..-++.+...|+ .|++++..  ++-..++++-+.. .+.-.-...+            -.++++|
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~-~~~~~~~~~d------------l~~~~lv   76 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLT-LVEGPFDETL------------LDSCWLA   76 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCE-EEESSCCGGG------------GTTCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCce-eeccCCCHHH------------hCCCcEE
Confidence            47899999999999999999999999 55555432  2333333332222 1110011111            2468999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +.+.+....-.......++.|.++-+.+.+
T Consensus        77 ~~at~d~~~n~~i~~~a~~~~ilVNv~D~p  106 (113)
T d1pjqa1          77 IAATDDDTVNQRVSDAAESRRIFCNVVDAP  106 (113)
T ss_dssp             EECCSCHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred             eecCCCHHHHHHHHHHHHHcCCEEEeCCCh
Confidence            999998766667778888889887665433

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.97  E-value=0.0022  Score=51.57  Aligned_cols=102  Identities=10%  Similarity=0.073  Sum_probs=67.1

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .+..++||++||=+|||. |..+..+++..+-.+|++++.+++..+.+++    .+-...+..+........       .
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-------~  121 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS-------G  121 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT-------T
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccc-------c
Confidence            346799999999999877 7788899998876689999999987776644    332222221111111100       0


Q ss_pred             hCCCCcEEEEcCCCh----HHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFDCVGFD----KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....+|+++..+...    ..+..+.+.|+++|+++..
T Consensus       122 ~~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         122 IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            124577777655332    2466677899999998765

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0079  Score=49.46  Aligned_cols=82  Identities=20%  Similarity=0.326  Sum_probs=54.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .|.++||.| ++++|...+..+...|+ .|+.+++++++.+.+    ++.|... .  .|+ ++.++..+.++++.+. -
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv-s~~~~v~~~~~~i~~~-~   82 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-SNREDIYSSAKKVKAE-I   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHHH-c
Confidence            488999998 68999887777777899 788888998876533    3344432 1  222 2223344444444332 4


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      +.+|+++++.|..
T Consensus        83 g~idilinnag~~   95 (244)
T d1yb1a_          83 GDVSILVNNAGVV   95 (244)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCCceeEeecccc
Confidence            5699999999864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.93  E-value=0.0061  Score=50.67  Aligned_cols=103  Identities=23%  Similarity=0.353  Sum_probs=67.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.|.+..   .|. ++..+..+.+.+..+.. 
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-   80 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDV-TSEEAVIGTVDSVVRDF-   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCT-TCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHHh-
Confidence            578999998 68999998888888999 788888988876543    33444321   222 23344445555444333 


Q ss_pred             CCCcEEEEcCCCh--------------------------HHHHHHHHhh--cCCceEEEEcc
Q 017793          255 SGIDVSFDCVGFD--------------------------KTMSTALNAT--RPGGKVCLIGL  288 (366)
Q Consensus       255 ~~~d~vld~~g~~--------------------------~~~~~~~~~l--~~~G~~v~~g~  288 (366)
                      +++|+++++.|..                          ...+.++..+  ..+|+++.++.
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS  142 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTAS  142 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeec
Confidence            5799999988742                          1233344444  57799998864

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.86  E-value=0.0018  Score=53.22  Aligned_cols=93  Identities=19%  Similarity=0.319  Sum_probs=68.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+++.+||=+|||. |..+..+++ .|+ .|++++.+++..+.+++.+.+..+..+.  .++.     .   ..+.||+|
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~--~~l~-----~---~~~~fD~i  106 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA--EDLP-----F---PSGAFEAV  106 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT--TSCC-----S---CTTCEEEE
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccc--cccc-----c---ccccccce
Confidence            56788999999985 999999987 487 7999999999999999877665544222  2221     1   14679998


Q ss_pred             EEcCCC-------hHHHHHHHHhhcCCceEEEE
Q 017793          261 FDCVGF-------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       261 ld~~g~-------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +.....       ...+..+.+.|++||.++..
T Consensus       107 i~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         107 LALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            865332       23567788999999988753

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.83  E-value=0.0059  Score=50.56  Aligned_cols=105  Identities=15%  Similarity=0.215  Sum_probs=69.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeee-c-CCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAK-V-STDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+ ..++++...... . .++..+..+.+.+..+. -+.+|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR-LGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH-HCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHH-hCCCC
Confidence            578889998 68999998888888999 7888889888765 445676543221 1 12233444444444332 35799


Q ss_pred             EEEEcCCCh-------------------------HHHHHHHHhhc-CCceEEEEccc
Q 017793          259 VSFDCVGFD-------------------------KTMSTALNATR-PGGKVCLIGLA  289 (366)
Q Consensus       259 ~vld~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~g~~  289 (366)
                      +++++.|..                         ...+.++..|+ .+|+++.++..
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            999999853                         12334555664 57999888743

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.83  E-value=0.0046  Score=50.85  Aligned_cols=82  Identities=24%  Similarity=0.339  Sum_probs=57.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +++++..+ .|. ++.++..+.+.+..+.. +++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDV-ADPASVERGFAEALAHL-GRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCT-TCHHHHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHHhc-CCceE
Confidence            478899998 68999999988888999 788888988887654 44555432 222 33345555555554433 46999


Q ss_pred             EEEcCCCh
Q 017793          260 SFDCVGFD  267 (366)
Q Consensus       260 vld~~g~~  267 (366)
                      ++++.|..
T Consensus        81 lVnnAG~~   88 (242)
T d1ulsa_          81 VVHYAGIT   88 (242)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99998753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.79  E-value=0.0022  Score=50.52  Aligned_cols=99  Identities=19%  Similarity=0.229  Sum_probs=66.5

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ...++++|++||=+|||. |..++.+|+. +. +|++++.+++..+.+++    +|.. .+..+..   +.....     
T Consensus        27 ~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g---da~~~~-----   95 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG---DAPEAL-----   95 (186)
T ss_dssp             HHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES---CHHHHH-----
T ss_pred             HhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC---chhhcc-----
Confidence            456789999999999765 6666777764 44 89999999987776654    5542 3222212   222221     


Q ss_pred             hhCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          252 AMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       252 ~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .....+|.|+...+.   ...++.+.+.|+++|+++..
T Consensus        96 ~~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_          96 CKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEE
Confidence            124679999876543   34677788899999998765

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.76  E-value=0.0023  Score=52.08  Aligned_cols=103  Identities=15%  Similarity=0.127  Sum_probs=69.6

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ++...++||++||=+|||. |..+..+++..|- .+|++++.+++..+.+++.    +-...+..+..  .... ..   
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~--~~~~-~~---  138 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDAT--KPEE-YR---  138 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTT--CGGG-GT---
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECC--Cccc-cc---
Confidence            4557799999999999887 8899999999874 4899999999987776553    21122221111  1111 10   


Q ss_pred             HhhCCCCcEEEEcCCCh----HHHHHHHHhhcCCceEEEE
Q 017793          251 NAMGSGIDVSFDCVGFD----KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~  286 (366)
                       .....+|+++..+...    ..+..+.+.|+++|++++.
T Consensus       139 -~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         139 -ALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             -TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence             0135688887665432    2466777899999998765

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.0052  Score=47.51  Aligned_cols=82  Identities=16%  Similarity=0.293  Sum_probs=53.7

Q ss_pred             HHHHhCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHH
Q 017793          174 HACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       174 ~~l~~~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+++..+ ..+|.+|||+|+|+.+.+++.-+...|+ ++..+.++.+|.+.+.+ +.....+....    +..    .  
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~----~~~----~--   75 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS----MDE----L--   75 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC----SGG----G--
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccc----ccc----c--
Confidence            3454433 3578899999999999999998888998 68888888888765443 33211111111    100    1  


Q ss_pred             hhCCCCcEEEEcCCCh
Q 017793          252 AMGSGIDVSFDCVGFD  267 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~  267 (366)
                       ....+|++++|.+..
T Consensus        76 -~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 -EGHEFDLIINATSSG   90 (170)
T ss_dssp             -TTCCCSEEEECCSCG
T ss_pred             -cccccceeecccccC
Confidence             135699999998654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.0067  Score=50.68  Aligned_cols=84  Identities=17%  Similarity=0.185  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecC--CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVS--TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~  255 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.+    ........+.  .........+.+......+
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            578999998 68999998888888899 78888899888765432    2222222221  1112222222222222245


Q ss_pred             CCcEEEEcCCCh
Q 017793          256 GIDVSFDCVGFD  267 (366)
Q Consensus       256 ~~d~vld~~g~~  267 (366)
                      ..|+++.+.|..
T Consensus        92 ~~~~li~nag~~  103 (269)
T d1xu9a_          92 GLDMLILNHITN  103 (269)
T ss_dssp             SCSEEEECCCCC
T ss_pred             Cccccccccccc
Confidence            789998877653

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.69  E-value=0.019  Score=47.27  Aligned_cols=103  Identities=15%  Similarity=0.287  Sum_probs=67.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-----HHHcCCcee---eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-----ARNLGADET---AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.     .++.|....   .|. ++..+..+.+.++.+..
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-SNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccC-CCHHHHHHHHHHHHHHc
Confidence            478899998 68999998888888999 78888888776532     234454422   222 23344444454444322


Q ss_pred             CCCCcEEEEcCCCh-------------------------HHHHHHHHhhc--CCceEEEEcc
Q 017793          254 GSGIDVSFDCVGFD-------------------------KTMSTALNATR--PGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~  288 (366)
                       +++|+++++.|..                         ...+..+..|.  .+|+++.++.
T Consensus        82 -g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          82 -GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence             4799999998753                         13444566663  4678888864

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.67  E-value=0.012  Score=43.20  Aligned_cols=75  Identities=17%  Similarity=0.191  Sum_probs=54.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+.+ ++... +.-+..  + ...+++   .+-..+|.++.+.
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~v-i~Gd~~--~-~~~l~~---~~i~~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALV-INGDCT--K-IKTLED---AGIEDADMYIAVT   73 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEE-EESCTT--S-HHHHHH---TTTTTCSEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhh-ccCccc--c-hhhhhh---cChhhhhhhcccC
Confidence            68999999999999999999998 79999999999887754 55543 221221  1 122222   2346799999988


Q ss_pred             CChH
Q 017793          265 GFDK  268 (366)
Q Consensus       265 g~~~  268 (366)
                      +..+
T Consensus        74 ~~d~   77 (132)
T d1lssa_          74 GKEE   77 (132)
T ss_dssp             SCHH
T ss_pred             CcHH
Confidence            8753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.66  E-value=0.0055  Score=50.93  Aligned_cols=83  Identities=16%  Similarity=0.252  Sum_probs=56.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.    +++.+... .  .|. ++..+..+.+.++.+..+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~-s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-LSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeec-CCHHHHHHHHHHHHHHhC
Confidence            688999998 68999999988888999 78888888876543    33444433 2  222 223344444444544445


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      +.+|+++.+.|..
T Consensus        83 g~idilinnag~~   95 (258)
T d1ae1a_          83 GKLNILVNNAGVV   95 (258)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCcEEEecccccc
Confidence            6799999988764

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.64  E-value=0.014  Score=51.52  Aligned_cols=111  Identities=15%  Similarity=0.133  Sum_probs=71.5

Q ss_pred             HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-----------CC--c-eeeecC
Q 017793          171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-----------GA--D-ETAKVS  236 (366)
Q Consensus       171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-----------g~--~-~~~~~~  236 (366)
                      .....++..++++|+++|=+|||. |..++++|+..|+..+++++.++...+.+++.           +.  . ......
T Consensus       204 ~i~~Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         204 FLSDVYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHHHHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHHHHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            345567889999999999899987 99999999999987899999999877666532           11  0 011111


Q ss_pred             CCCcchHHHHHHHHHhhCCCCcEEEEc-CC-Ch---HHHHHHHHhhcCCceEEEEc
Q 017793          237 TDIEDVDTDVGKIQNAMGSGIDVSFDC-VG-FD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~vld~-~g-~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+..+. ......    -..+|+++-. .- .+   ..+....+.|++||+++...
T Consensus       283 ~~f~~~-~~~d~~----~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVDN-NRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTTC-HHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhhc-cccccc----cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            110000 111111    2457888753 21 12   24566778899999998754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.007  Score=49.97  Aligned_cols=82  Identities=23%  Similarity=0.228  Sum_probs=55.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.+ ++....+..+ ++..+..+.+.+..+.. +++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc-CCCCE
Confidence            588999998 68999998888888999 78888899888776654 4322222111 23334444444444333 47999


Q ss_pred             EEEcCCC
Q 017793          260 SFDCVGF  266 (366)
Q Consensus       260 vld~~g~  266 (366)
                      ++++.|.
T Consensus        83 lVnnAG~   89 (250)
T d1ydea1          83 VVNNAGH   89 (250)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.62  E-value=0.003  Score=53.24  Aligned_cols=101  Identities=12%  Similarity=0.135  Sum_probs=68.6

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHH
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ....++++++||=+|||. |..+..+++..|+ .|++++.++...+.+++    .|.. .+-....+..++.        
T Consensus        61 ~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~--------  130 (282)
T d2o57a1          61 MTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--------  130 (282)
T ss_dssp             HTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--------
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccccccc--------
Confidence            446799999999999885 7788889988888 79999999887666654    3433 2211112211211        


Q ss_pred             hhCCCCcEEEEcC-----CC-hHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...+.||+|+-.-     .. ...+..+.+.|+|||+++...
T Consensus       131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            0135699997532     21 246788899999999988764

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.017  Score=49.62  Aligned_cols=108  Identities=15%  Similarity=0.123  Sum_probs=68.6

Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-----------CC--ceeeecCCCC
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-----------GA--DETAKVSTDI  239 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-----------g~--~~~~~~~~~~  239 (366)
                      ...++..+++++++||=+|||. |..++++|+..++..+++++.+++..+.+++.           |.  ..+--...+.
T Consensus       141 ~~~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~  219 (328)
T d1nw3a_         141 AQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF  219 (328)
T ss_dssp             HHHHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT
T ss_pred             HHHHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc
Confidence            3456788999999999999887 88999999999987899999999877666431           21  1111111111


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEc-CC-Ch---HHHHHHHHhhcCCceEEEEc
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDC-VG-FD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~-~g-~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+..  ..+..    ..+|+|+-. .. .+   ..+....+.|++||+++..-
T Consensus       220 ~~~~--~~~~~----~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         220 LSEE--WRERI----ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TSHH--HHHHH----HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccc--ccccc----CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            1111  11110    136788742 11 12   24556777899999998754

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00038  Score=57.22  Aligned_cols=98  Identities=12%  Similarity=0.096  Sum_probs=63.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc---eeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD---ETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      ..+|.+||-+|+|. |..+..+++..+. .+++++.+++-.+.+++....   .+....   .+.....   .....+.|
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~f  122 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVA---PTLPDGHF  122 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHG---GGSCTTCE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---ccccccc---cccccccc
Confidence            36789999999876 7888889886555 799999999998888765322   111111   1111111   11124568


Q ss_pred             cEE-EEcCCCh----------HHHHHHHHhhcCCceEEEE
Q 017793          258 DVS-FDCVGFD----------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       258 d~v-ld~~g~~----------~~~~~~~~~l~~~G~~v~~  286 (366)
                      |.+ +|.+...          ..+..+.+.|+|||+++..
T Consensus       123 D~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         123 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            888 4554321          2456688899999999864

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.60  E-value=0.0045  Score=48.88  Aligned_cols=75  Identities=15%  Similarity=0.325  Sum_probs=51.0

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCc-eeeecCCCCcchHHHHHHHHHhhC
Q 017793          182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L----GAD-ETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      =+|.++||.| +|++|....+.+...|+ +|+.++++.++.+.+.+ +    ... ...+..    + .+.+++.    -
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~~~~~----~   90 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----D-DASRAEA----V   90 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----S-HHHHHHH----T
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhcc----c-HHHHHHH----h
Confidence            3689999998 69999999988888999 78888898887654433 2    211 122221    1 1223332    3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|++|++.|.
T Consensus        91 ~~iDilin~Ag~  102 (191)
T d1luaa1          91 KGAHFVFTAGAI  102 (191)
T ss_dssp             TTCSEEEECCCT
T ss_pred             cCcCeeeecCcc
Confidence            579999999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.007  Score=49.78  Aligned_cols=80  Identities=20%  Similarity=0.208  Sum_probs=54.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+. .++++....+..+-  .+. +.++++.+. -+++|++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv--~d~-~~v~~~~~~-~g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL--GDW-EATERALGS-VGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT--TCH-HHHHHHHTT-CCCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeC--CCH-HHHHHHHHH-hCCceEE
Confidence            688999998 68999999888888999 78888899888664 44555433322211  121 223333332 2579999


Q ss_pred             EEcCCCh
Q 017793          261 FDCVGFD  267 (366)
Q Consensus       261 ld~~g~~  267 (366)
                      +++.|..
T Consensus        81 VnnAg~~   87 (244)
T d1pr9a_          81 VNNAAVA   87 (244)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9988763

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0036  Score=51.66  Aligned_cols=80  Identities=21%  Similarity=0.311  Sum_probs=54.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      +|.++||.| ++++|.+..+.+...|+ .|+.+++++++.+.+.+.........+...   .+....... .-.++|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~~-~~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFAN-EVERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHH-HCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccc---ccccccccc-ccccceeEE
Confidence            578899998 68999999998888999 788888998887665554333332222222   223333322 245799999


Q ss_pred             EcCCCh
Q 017793          262 DCVGFD  267 (366)
Q Consensus       262 d~~g~~  267 (366)
                      ++.|..
T Consensus        80 n~ag~~   85 (245)
T d2ag5a1          80 NVAGFV   85 (245)
T ss_dssp             ECCCCC
T ss_pred             eccccc
Confidence            998764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.02  Score=47.23  Aligned_cols=83  Identities=19%  Similarity=0.286  Sum_probs=55.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eeeec---CCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD-ETAKV---STDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~---~~~~~~~~~~~~~~~~~~  253 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.+.. .++.+   .++.++..+.+.++.+..
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            477899998 68999998888888999 688888888876543    233322 33222   133445555555555433


Q ss_pred             CCCCcEEEEcCCCh
Q 017793          254 GSGIDVSFDCVGFD  267 (366)
Q Consensus       254 ~~~~d~vld~~g~~  267 (366)
                       +++|+++++.|..
T Consensus        88 -g~iD~lVnnAg~~  100 (257)
T d1xg5a_          88 -SGVDICINNAGLA  100 (257)
T ss_dssp             -CCCSEEEECCCCC
T ss_pred             -CCCCEEEeccccc
Confidence             5699999998763

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.55  E-value=0.0057  Score=50.35  Aligned_cols=82  Identities=18%  Similarity=0.223  Sum_probs=56.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ ++++....   .|. ++..+..+.++++.+.. +++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~i   81 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDV-TQPAQWKAAVDTAVTAF-GGL   81 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeec-CCHHHHHHHHHHHHHHh-CCC
Confidence            578899998 68999998888888999 788888888877644 45553221   222 23334444455554433 469


Q ss_pred             cEEEEcCCCh
Q 017793          258 DVSFDCVGFD  267 (366)
Q Consensus       258 d~vld~~g~~  267 (366)
                      |+++++.|..
T Consensus        82 dilinnAG~~   91 (244)
T d1nffa_          82 HVLVNNAGIL   91 (244)
T ss_dssp             CEEEECCCCC
T ss_pred             eEEEECCccc
Confidence            9999998763

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0014  Score=53.66  Aligned_cols=106  Identities=9%  Similarity=-0.055  Sum_probs=66.9

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceee-------------ecCCCCcch-HH
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-------------KVSTDIEDV-DT  244 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~-------------~~~~~~~~~-~~  244 (366)
                      ...+++.+||..|||. |..+..+|+ .|+ .|+++|.|++..+.+++.......             ......-++ ..
T Consensus        41 l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  117 (229)
T d2bzga1          41 LKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCC  117 (229)
T ss_dssp             HTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred             cCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEc
Confidence            4578899999999987 888888887 598 799999999988877653221100             000000000 00


Q ss_pred             HHHHHHHhhCCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEEc
Q 017793          245 DVGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       245 ~~~~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+..+.......+|+|+++..-        ...+..+.++|+|+|++++..
T Consensus       118 d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         118 SIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             CGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             chhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            0111111224568999986521        235667889999999977654

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.52  E-value=0.0058  Score=49.78  Aligned_cols=105  Identities=10%  Similarity=0.109  Sum_probs=67.1

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eeeecCCCCcchHHHHHHHHHhh
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ++...++||++||=+|||. |..+..+++...-..|++++.+++..+.+++.-..  .+.....+....... .    ..
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~-~----~~  140 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY-A----NI  140 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG-T----TT
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccc-c----cc
Confidence            4556799999999999887 88999999976545899999999988877664211  111111111111111 0    01


Q ss_pred             CCCCcEEEEcCCCh----HHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVSFDCVGFD----KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~  286 (366)
                      ...+|+++......    ..+..+.+.|+++|.+++.
T Consensus       141 ~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence            23455666655432    2466677889999998765

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.52  E-value=0.018  Score=44.61  Aligned_cols=96  Identities=18%  Similarity=0.166  Sum_probs=61.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC----CCCcchHHHHHHHHHhhCCCCcEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS----TDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .++.|+|+|.+|.+....+...|. .|...++++++.+.+++.+........    .........+.+..    ..+|++
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~----~~aD~i   76 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----KDADVI   76 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH----TTCSEE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh----cCCCEE
Confidence            589999999999999999998998 788899999998888776532211000    00001111122221    469999


Q ss_pred             EEcCCChH---HHHHHHHhhcCCceEEE
Q 017793          261 FDCVGFDK---TMSTALNATRPGGKVCL  285 (366)
Q Consensus       261 ld~~g~~~---~~~~~~~~l~~~G~~v~  285 (366)
                      |-++....   .+.+...++.++..++.
T Consensus        77 ii~v~~~~~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          77 LIVVPAIHHASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             EECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred             EEEEchhHHHHHHHHhhhccCCCCEEEE
Confidence            99998763   23334445566655443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.51  E-value=0.0038  Score=50.34  Aligned_cols=95  Identities=14%  Similarity=0.177  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .++++++||-+|||. |..+..+++. |. .|+++|.+++-.+.+++    .+..... ...+..++.        ....
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~-~~~d~~~l~--------~~~~  101 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEF-IVGDARKLS--------FEDK  101 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEE-EECCTTSCC--------SCTT
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhccccccccc-ccccccccc--------ccCc
Confidence            367889999999987 8888888874 77 79999999988877764    3322211 111211211        0135


Q ss_pred             CCcEEEEcCCC-----h---HHHHHHHHhhcCCceEEEE
Q 017793          256 GIDVSFDCVGF-----D---KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       256 ~~d~vld~~g~-----~---~~~~~~~~~l~~~G~~v~~  286 (366)
                      .+|+|+..-.-     .   ..+..+.+.|+|||+++..
T Consensus       102 ~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         102 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            69998764321     1   2567788899999998754

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.46  E-value=0.0099  Score=48.76  Aligned_cols=79  Identities=20%  Similarity=0.231  Sum_probs=52.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+ ..++++.-..+..  +-.+. +.+++..+. -+++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~--Dv~~~-~~v~~~~~~-~g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCV--DLGDW-DATEKALGG-IGPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEEC--CTTCH-HHHHHHHTT-CCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEE--eCCCH-HHHHHHHHH-cCCCeEE
Confidence            478999998 68999998888888999 7888888887765 4455543332222  11122 223333332 3579999


Q ss_pred             EEcCCC
Q 017793          261 FDCVGF  266 (366)
Q Consensus       261 ld~~g~  266 (366)
                      +++.|.
T Consensus        79 VnnAg~   84 (242)
T d1cyda_          79 VNNAAL   84 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999875

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.46  E-value=0.018  Score=43.92  Aligned_cols=86  Identities=19%  Similarity=0.185  Sum_probs=58.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|.|+|+|.+|......++..|. .|++.++++++.+.+++++. +...+      +. +.        -...|+||-|+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~------~~-~~--------~~~~DiIilav   65 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ------DL-SL--------LQTAKIIFLCT   65 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES------CG-GG--------GTTCSEEEECS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeee------ec-cc--------ccccccccccC
Confidence            68899999999887777788898 78899999999999998884 33221      11 11        24689999998


Q ss_pred             CChH---HHHHHHHhhcCCceEEEEc
Q 017793          265 GFDK---TMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       265 g~~~---~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....   .++.....+.++..++.++
T Consensus        66 p~~~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          66 PIQLILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             CHHHHHHHHHHHGGGSCTTCEEEECC
T ss_pred             cHhhhhhhhhhhhhhcccccceeecc
Confidence            7542   2333333445555555554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.41  E-value=0.02  Score=44.05  Aligned_cols=97  Identities=13%  Similarity=0.095  Sum_probs=63.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +.+|||+|+|-+|..+++.+...|. .|++++++.++.+.+.+-...........  .........    -...|.++.+
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~--~~~~~~~~~----i~~~~~~i~~   74 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV--NDDAALDAE----VAKHDLVISL   74 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCT--TCHHHHHHH----HTTSSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccc--cchhhhHhh----hhccceeEee
Confidence            5789999999999999888888898 79999999998887655333232222111  111122222    2467888888


Q ss_pred             CCChHHHHHHHHhhcCCceEEEEc
Q 017793          264 VGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       264 ~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+..........++..+..++...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          75 IPYTFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEECSS
T ss_pred             ccchhhhHHHHHHHhhccceeecc
Confidence            876655555555666666665543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.41  E-value=0.01  Score=49.24  Aligned_cols=104  Identities=17%  Similarity=0.248  Sum_probs=66.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCcee-eecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      .|.++||.| ++++|.+..+.+...|++.++...++++..+    .+++.|.... +..+ ++..+..+.+.++.+.. +
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-G   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc-C
Confidence            588999998 6899999998888899954444556655433    3345665432 1111 22334444444444333 4


Q ss_pred             CCcEEEEcCCCh-------------------------HHHHHHHHhhcCCceEEEEc
Q 017793          256 GIDVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       256 ~~d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ++|+++.+.|..                         ...+..+..|+++|.++.+.
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~  140 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS  140 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence            699999998864                         14555677778888877765

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.40  E-value=0.0046  Score=51.17  Aligned_cols=78  Identities=12%  Similarity=0.089  Sum_probs=51.1

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      ++||.| ++++|.+..+.+...|+ +|+.++++.++.+.+++++... ..+. .+..+..+.+.+..+.. +++|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv-~~~~~~~~~~~~~~~~~-G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-MSEQEPAELIEAVTSAY-GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-CCCCSHHHHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEecc-CCHHHHHHHHHHHHHHc-CCCCEEEEC
Confidence            688998 58999998887777899 7888888877766665533111 1122 23345555555554433 479999987


Q ss_pred             CCC
Q 017793          264 VGF  266 (366)
Q Consensus       264 ~g~  266 (366)
                      .|.
T Consensus        79 Ag~   81 (252)
T d1zmta1          79 DIF   81 (252)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.36  E-value=0.029  Score=46.10  Aligned_cols=82  Identities=13%  Similarity=0.220  Sum_probs=53.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ++..+||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.|....   .|. ++..+..+.+.++.+ .-
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~-~~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-SKKEEISEVINKILT-EH   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-TCHHHHHHHHHHHHH-HC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHH-hc
Confidence            467788898 68999998888878899 788888888776533    33443321   222 233444444444433 24


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      +++|+++++.|..
T Consensus        86 g~iDilvnnag~~   98 (251)
T d2c07a1          86 KNVDILVNNAGIT   98 (251)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCceeeeeccccc
Confidence            5899999988763

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.029  Score=46.13  Aligned_cols=104  Identities=16%  Similarity=0.234  Sum_probs=66.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcC----Ccee----eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG----ADET----AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg----~~~~----~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +++.    ...+    .|. ++..+..+.+.++.+.
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV-ADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeec-CCHHHHHHHHHHHHHH
Confidence            378899998 68999998888888999 788888888776543 3331    1122    222 2333444444444433


Q ss_pred             hCCCCcEEEEcCCChH-----------------HHHHHHHhhc-----CCceEEEEccc
Q 017793          253 MGSGIDVSFDCVGFDK-----------------TMSTALNATR-----PGGKVCLIGLA  289 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~  289 (366)
                      . +++|+++++.|...                 ....++..|.     .+|+++.++..
T Consensus        80 ~-G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          80 F-GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             H-SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             c-CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence            3 47999999988641                 2233445553     35888888643

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.35  E-value=0.042  Score=44.73  Aligned_cols=104  Identities=19%  Similarity=0.236  Sum_probs=68.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .|.++||.| ++++|.+.++-+...|+ +|+.+.+++++.+ ..++++....   .|. ++.++..+.+.++... -+++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-s~~~~i~~~~~~i~~~-~g~i   80 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADV-SDPKAVEAVFAEALEE-FGRL   80 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCT-TSHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecC-CCHHHHHHHHHHHHHH-hCCc
Confidence            578999998 68999999888888999 7888888887665 4456775432   222 2233444444444332 2579


Q ss_pred             cEEEEcCCCh-------------------------HHHHHHHHhhcCCceEEEEccc
Q 017793          258 DVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       258 d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      |+.+.+.+..                         ...+..+..+..++.++..+..
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~  137 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  137 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence            9999988643                         1233455667777777766543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.32  E-value=0.0096  Score=49.29  Aligned_cols=81  Identities=23%  Similarity=0.343  Sum_probs=56.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+ .+++++....   .|. ++.++..+.+.+..+.. +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dv-t~~~~v~~~~~~~~~~~-g~i   80 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDV-TDQASIDRCVAELLDRW-GSI   80 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeC-CCHHHHHHHHHHHHHHh-CCc
Confidence            477889998 68999998888888999 7888888887765 5566775432   222 23344444444444333 579


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        81 DilVnnAg~   89 (256)
T d1k2wa_          81 DILVNNAAL   89 (256)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEeeccc
Confidence            999999885

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.32  E-value=0.0072  Score=51.97  Aligned_cols=104  Identities=20%  Similarity=0.193  Sum_probs=66.5

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ..+++|++||=.++|. |..++.+|+ .|+..|++++.+++..+.+++    .|....+.+.  ..+....+..+.. .+
T Consensus       141 ~~~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~--~~d~~~~~~~~~~-~~  215 (324)
T d2as0a2         141 KWVQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFI--VGSAFEEMEKLQK-KG  215 (324)
T ss_dssp             GGCCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHH-TT
T ss_pred             hhcCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceee--echhhhhhHHHHh-cc
Confidence            3468899998876543 445555555 477789999999998887754    4553211111  1344444444332 25


Q ss_pred             CCCcEEEEcCCC---------------hHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..||+|+--.+.               ...+..+.++|++||.++...
T Consensus       216 ~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s  263 (324)
T d2as0a2         216 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS  263 (324)
T ss_dssp             CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            689999853331               125566788999999988874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.31  E-value=0.014  Score=48.12  Aligned_cols=82  Identities=18%  Similarity=0.299  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G~-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.|+ |  ++|.+.++.+...|+ .|+.++++++..+.++    +.+....+..+ ++..+..+.+.+..+. -
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA-F   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh-c
Confidence            4788999995 5  799988887778899 6777777766544333    33333332221 2233444444444333 3


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +++|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            579999998864

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.30  E-value=0.009  Score=48.78  Aligned_cols=101  Identities=18%  Similarity=0.183  Sum_probs=60.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHH-HHHHHHH-hhCCCCcE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT-DVGKIQN-AMGSGIDV  259 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~d~  259 (366)
                      +|.+|||.| ++++|.+.++.+...|+ .|+.++.+++...     .............+..+ ....+.. ....++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            478999998 68999999999999999 6777766554321     11111111111111111 1112222 12456999


Q ss_pred             EEEcCCCh--------------------------HHHHHHHHhhcCCceEEEEccc
Q 017793          260 SFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       260 vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      ++++.|..                          ...+..+..|+++|+++.++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~  130 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  130 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence            99998741                          1333455677889999988754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.012  Score=49.11  Aligned_cols=102  Identities=22%  Similarity=0.374  Sum_probs=62.5

Q ss_pred             CCEE-EEEC-CCHHHHHHH-HHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-ee--eecCCCCcchHHHHHHHHHhh
Q 017793          184 ETNV-MIMG-SGPIGLVTL-LAARAFGAPRIIITDVDVQRLSIA----RNLGAD-ET--AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       184 ~~~v-lI~G-~g~vG~~ai-~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~--~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      |.+| ||.| ++++|.+.+ +|++.-|+ .|+.+++++++.+.+    ++.+.. ..  .|. ++..+..+...++.+..
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-s~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI-DDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEec-CCHHHHHHHHHHHHHhc
Confidence            5677 6678 689998765 56666677 788888888876533    333432 12  222 22233333344444333


Q ss_pred             CCCCcEEEEcCCCh-------------------------HHHHHHHHhhcCCceEEEEcc
Q 017793          254 GSGIDVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  288 (366)
                       +++|+++++.|..                         ...+.++..|++.|+++.++.
T Consensus        80 -g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          80 -GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             -SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             -CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence             4799999998853                         123345566778899888764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.28  E-value=0.033  Score=46.33  Aligned_cols=104  Identities=15%  Similarity=0.240  Sum_probs=67.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC-hhHHH----HHHHcCCceeee-c-CCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD-VQRLS----IARNLGADETAK-V-STDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~----~~~~lg~~~~~~-~-~~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.++++ ++..+    .+++.+.+.... . ..+.++..+.+.++.+.. 
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh-
Confidence            378999998 68999999988888999 56666544 44433    334556543221 1 123344555555544433 


Q ss_pred             CCCcEEEEcCCCh-------------------------HHHHHHHHhhcCCceEEEEcc
Q 017793          255 SGIDVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       255 ~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +++|+++.+.|..                         ...+.....|.+.|+++.++.
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence            5799999988754                         145566777888898888764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.26  E-value=0.0091  Score=43.93  Aligned_cols=74  Identities=9%  Similarity=0.214  Sum_probs=54.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +++|.|.|.+|...++.+...|. .|++++.++++.+.+++.+...++ -+...+++   +.+.   +-..+|.++-+.+
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~-gd~~~~~~---l~~a---~i~~a~~vi~~~~   73 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANATEENE---LLSL---GIRNFEYVIVAIG   73 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEE-CCTTCTTH---HHHH---TGGGCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCccee-eecccchh---hhcc---CCccccEEEEEcC
Confidence            57889999999999999999999 689999999999988887765433 22222222   2222   2346899988887


Q ss_pred             Ch
Q 017793          266 FD  267 (366)
Q Consensus       266 ~~  267 (366)
                      ..
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            65

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.23  E-value=0.018  Score=48.47  Aligned_cols=83  Identities=13%  Similarity=0.196  Sum_probs=52.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-----HHHcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.     .++.|... .+..+ ++..+..+...... ...
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~-~~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI-KVA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH-HHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh-hhc
Confidence            478899998 69999998888888999 78888888876532     22334332 22111 12222222233322 235


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      +++|+++++.|..
T Consensus       102 g~iDilvnnAg~~  114 (294)
T d1w6ua_         102 GHPNIVINNAAGN  114 (294)
T ss_dssp             CSCSEEEECCCCC
T ss_pred             cccchhhhhhhhc
Confidence            7899999998753

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.22  E-value=0.017  Score=48.14  Aligned_cols=81  Identities=27%  Similarity=0.388  Sum_probs=54.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc---ee--eecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD---ET--AKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~---~~--~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+ ++++..   ..  .|. ++.++..+.+.++.+.. +
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g   81 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDV-TKDEDVRNLVDTTIAKH-G   81 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-TCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccC-CCHHHHHHHHHHHHHHc-C
Confidence            578899998 68999998888888899 788888888876644 445432   11  122 23344444444444333 4


Q ss_pred             CCcEEEEcCCC
Q 017793          256 GIDVSFDCVGF  266 (366)
Q Consensus       256 ~~d~vld~~g~  266 (366)
                      .+|+++++.|.
T Consensus        82 ~iD~lVnnAG~   92 (268)
T d2bgka1          82 KLDIMFGNVGV   92 (268)
T ss_dssp             CCCEEEECCCC
T ss_pred             Ccceecccccc
Confidence            79999998874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.21  E-value=0.0061  Score=50.31  Aligned_cols=83  Identities=20%  Similarity=0.236  Sum_probs=54.0

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCCceeeecC---CCCcchHHHHHHHHHh-hCCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADETAKVS---TDIEDVDTDVGKIQNA-MGSGI  257 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~  257 (366)
                      ..+|||.| ++++|.+.++.+...|+. .|+.+.+++++.+.+++.....+..+.   ++..+..+...++.+. +..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            36899998 689999887777667864 577788888888777765433322221   2223334444444332 23469


Q ss_pred             cEEEEcCCC
Q 017793          258 DVSFDCVGF  266 (366)
Q Consensus       258 d~vld~~g~  266 (366)
                      |+++++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999985

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.20  E-value=0.012  Score=48.61  Aligned_cols=82  Identities=27%  Similarity=0.319  Sum_probs=55.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.+++++++.+ .+++++....   .|. ++..+..+.+.++.+.. +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDV-TIEEDWQRVVAYAREEF-GSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEccc-CCHHHHHHHHHHHHHHc-CCc
Confidence            478999998 68999998888888899 6888888887765 4455653321   222 23344444444444333 479


Q ss_pred             cEEEEcCCCh
Q 017793          258 DVSFDCVGFD  267 (366)
Q Consensus       258 d~vld~~g~~  267 (366)
                      |+++++.|..
T Consensus        81 DilVnnAg~~   90 (254)
T d1hdca_          81 DGLVNNAGIS   90 (254)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEecCccc
Confidence            9999998753

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.17  E-value=0.045  Score=46.21  Aligned_cols=103  Identities=18%  Similarity=0.263  Sum_probs=64.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC---------hhHHH-HHH---HcCCceeeecCCCCcchHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD---------VQRLS-IAR---NLGADETAKVSTDIEDVDTDVGK  248 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~---------~~~~~-~~~---~lg~~~~~~~~~~~~~~~~~~~~  248 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.++.+         ++..+ ..+   ..+.....+. .+..+..+.+.+
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANY-DSVEAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEEC-CCGGGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhccccccccc-chHHHHHHHHHH
Confidence            478889998 68999998888888999 67776543         22222 222   2333334443 333444455554


Q ss_pred             HHHhhCCCCcEEEEcCCCh-------------------------HHHHHHHHhh--cCCceEEEEcc
Q 017793          249 IQNAMGSGIDVSFDCVGFD-------------------------KTMSTALNAT--RPGGKVCLIGL  288 (366)
Q Consensus       249 ~~~~~~~~~d~vld~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~  288 (366)
                      ..+. -+++|+++++.|..                         ...+.++..|  ..+|+++.++.
T Consensus        84 ~~~~-~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          84 ALDT-FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             HHHH-TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHH-cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            4432 45799999998753                         1334455555  35689998874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.16  E-value=0.032  Score=42.65  Aligned_cols=92  Identities=22%  Similarity=0.172  Sum_probs=64.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +|+|+|+|.+|...+.-++..|. .+|++.+++++..+.+++.+.- ....   ....       .   .....|+++-|
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~---~~~~-------~---~~~~~dlIila   69 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT---SIAK-------V---EDFSPDFVMLS   69 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES---CGGG-------G---GGTCCSEEEEC
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhh---hhhh-------h---hcccccccccc
Confidence            69999999999988888888885 3689999999999999998853 2221   1000       0   12468999999


Q ss_pred             CCChH---HHHHHHHhhcCCceEEEEcccC
Q 017793          264 VGFDK---TMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       264 ~g~~~---~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +....   .+....+.+.++..++.++...
T Consensus        70 ~p~~~~~~vl~~l~~~~~~~~ii~d~~s~k   99 (171)
T d2g5ca2          70 SPVRTFREIAKKLSYILSEDATVTDQGSVK   99 (171)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred             CCchhhhhhhhhhhcccccccccccccccc
Confidence            88543   2334555667777777766543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.13  E-value=0.016  Score=48.02  Aligned_cols=81  Identities=25%  Similarity=0.365  Sum_probs=53.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC-ceee----ecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGA-DETA----KVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~-~~~~----~~~~~~~~~~~~~~~~~~~  252 (366)
                      .|.++||.| ++++|.+..+.+...|+ .|+.+++++++.+.+.    +.+. ..++    |. ++.++..+.+.+..+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dv-t~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-SDEAQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccC-CCHHHHHHHHHHHHHH
Confidence            477899998 68999998888888999 7888888888765432    2221 1222    22 2334444444444432


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                      . +++|+++++.|.
T Consensus        81 ~-G~iDiLVnnAG~   93 (258)
T d1iy8a_          81 F-GRIDGFFNNAGI   93 (258)
T ss_dssp             H-SCCSEEEECCCC
T ss_pred             h-CCCCEEEECCcc
Confidence            2 479999999873

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.11  E-value=0.0076  Score=49.90  Aligned_cols=104  Identities=19%  Similarity=0.203  Sum_probs=60.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH---H-cCCcee----eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR---N-LGADET----AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~---~-lg~~~~----~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +|.++||.| ++++|.+....+...|++.++..++.++ .+.+.   + .+...+    .+...+..+..+.+.++.+..
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC-HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCccc-HHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            478999998 6899998777777789965555444433 33222   2 232222    222112223444444444433


Q ss_pred             CCCCcEEEEcCCChH-----------------HHHHHHHhhc-----CCceEEEEcc
Q 017793          254 GSGIDVSFDCVGFDK-----------------TMSTALNATR-----PGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~  288 (366)
                       +++|+++++.|...                 .....+..|.     ++|+++.++.
T Consensus        83 -g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS  138 (254)
T d1sbya1          83 -KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS  138 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             -CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEec
Confidence             47999999998641                 3334445552     3588887764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.09  E-value=0.0098  Score=48.49  Aligned_cols=97  Identities=22%  Similarity=0.290  Sum_probs=59.5

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHH----HHHHH-hhCCCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV----GKIQN-AMGSGI  257 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~  257 (366)
                      +.+|||.| ++++|.+.++.+...|+ .|+.++++++...       +.......+ .+.....    ..... ...+.+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-------DSNILVDGN-KNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-------SEEEECCTT-SCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-------cccceeccc-cCchhHHHHHHHHHHHHhcCCCe
Confidence            45799998 68999998888888999 6888877765321       111111111 1111111    11111 124679


Q ss_pred             cEEEEcCCCh--------------------------HHHHHHHHhhcCCceEEEEccc
Q 017793          258 DVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       258 d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                      |+++++.|..                          ...+..+..|+++|+++.++..
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~  130 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  130 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence            9999998742                          1234456677889999988743

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.07  E-value=0.012  Score=45.95  Aligned_cols=49  Identities=10%  Similarity=0.140  Sum_probs=38.1

Q ss_pred             HHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH
Q 017793          174 HACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS  222 (366)
Q Consensus       174 ~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~  222 (366)
                      ++++..++. .+.+|||+|+|+.|.+++..+...|+..+..+.+++++.+
T Consensus         7 ~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~   56 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFD   56 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHH
T ss_pred             HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHH
Confidence            445544432 5789999999999999998888899988888888776544

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0039  Score=49.78  Aligned_cols=75  Identities=27%  Similarity=0.310  Sum_probs=49.3

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      ..+|+|.| +|.+|...+..+...|. .|.++.+++++.......++..+ .  .+-.+.. .+.+..    .++|+||.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~-~--gD~~d~~-~l~~al----~~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVV-V--GDVLQAA-DVDKTV----AGQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEE-E--SCTTSHH-HHHHHH----TTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccccc-c--ccccchh-hHHHHh----cCCCEEEE
Confidence            46899998 69999999988888898 78888888877544333333322 2  1222322 233332    46899999


Q ss_pred             cCCCh
Q 017793          263 CVGFD  267 (366)
Q Consensus       263 ~~g~~  267 (366)
                      ++|..
T Consensus        74 ~~g~~   78 (205)
T d1hdoa_          74 LLGTR   78 (205)
T ss_dssp             CCCCT
T ss_pred             EeccC
Confidence            99753

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.03  E-value=0.0096  Score=49.90  Aligned_cols=80  Identities=21%  Similarity=0.297  Sum_probs=54.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+ ..++++....   .|. ++..+..+.+.+..+. -+.+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDV-RSLEDQKQAASRCVAR-FGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccc-ccHHHHHHHHHHHHHH-hCCc
Confidence            488999998 68999998888888999 7888889888765 4455654321   122 2233444444444332 2579


Q ss_pred             cEEEEcCC
Q 017793          258 DVSFDCVG  265 (366)
Q Consensus       258 d~vld~~g  265 (366)
                      |+++++.|
T Consensus        81 dilvnnAG   88 (276)
T d1bdba_          81 DTLIPNAG   88 (276)
T ss_dssp             CEEECCCC
T ss_pred             cccccccc
Confidence            99999887

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.01  E-value=0.018  Score=47.43  Aligned_cols=83  Identities=17%  Similarity=0.192  Sum_probs=54.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eeeecC---CCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ETAKVS---TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ ++++.. .+..+.   ++..+..+.+.++.+.. ++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            478899998 68999998888888899 688888888877644 344321 221111   22334444444444333 57


Q ss_pred             CcEEEEcCCCh
Q 017793          257 IDVSFDCVGFD  267 (366)
Q Consensus       257 ~d~vld~~g~~  267 (366)
                      +|+++++.|..
T Consensus        83 iDiLVnnAg~~   93 (251)
T d1zk4a1          83 VSTLVNNAGIA   93 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             ceEEEeccccc
Confidence            99999998763

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.95  E-value=0.016  Score=47.82  Aligned_cols=83  Identities=14%  Similarity=0.270  Sum_probs=54.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee-eecC-CCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  255 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.|.... +..+ ++..+..+.+.+..+.. +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            578899998 68999998888888999 688888888765533    44554322 1111 22233344444443332 4


Q ss_pred             CCcEEEEcCCCh
Q 017793          256 GIDVSFDCVGFD  267 (366)
Q Consensus       256 ~~d~vld~~g~~  267 (366)
                      ++|+++++.|..
T Consensus        88 ~iDilvnnAG~~   99 (255)
T d1fmca_          88 KVDILVNNAGGG   99 (255)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEeeeCCcCC
Confidence            799999998763

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.95  E-value=0.028  Score=46.47  Aligned_cols=82  Identities=22%  Similarity=0.263  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHH-----HHcCCcee---eecCCCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIA-----RNLGADET---AKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~-----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~  252 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.+++++ ++.+.+     .+.|....   .|. ++.++..+.+.+..+.
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-SKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-TSHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHHH
Confidence            577889998 68999998888888899 677777653 443322     22343322   122 2233444444444333


Q ss_pred             hCCCCcEEEEcCCCh
Q 017793          253 MGSGIDVSFDCVGFD  267 (366)
Q Consensus       253 ~~~~~d~vld~~g~~  267 (366)
                      . +++|+++++.|..
T Consensus        81 ~-G~iDiLVnnAG~~   94 (260)
T d1x1ta1          81 M-GRIDILVNNAGIQ   94 (260)
T ss_dssp             H-SCCSEEEECCCCC
T ss_pred             h-CCCcEEEeecccc
Confidence            2 5799999998753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.91  E-value=0.05  Score=40.74  Aligned_cols=82  Identities=23%  Similarity=0.336  Sum_probs=56.1

Q ss_pred             EEEEECCCHHHHHHHH-HHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMGSGPIGLVTLL-AARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~-la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +|.++|+|.+|.+.++ +++. |...+.+.++++++.+.+.+ +|....-+    .+.            -...|+||-|
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~-~~~~i~v~~r~~~~~~~l~~~~~~~~~~~----~~~------------v~~~Div~la   64 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGAEKRERLEKELGVETSAT----LPE------------LHSDDVLILA   64 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSHHHHHHHHHHTCCEEESS----CCC------------CCTTSEEEEC
T ss_pred             EEEEEcCcHHHHHHHHHHHHC-CCCcEEEEeCChhHHHHhhhhcccccccc----ccc------------ccccceEEEe
Confidence            5889999999997666 5554 54489999999998876654 66543211    111            1347999999


Q ss_pred             CCChHHHHHHHHhhcCCceEEE
Q 017793          264 VGFDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       264 ~g~~~~~~~~~~~l~~~G~~v~  285 (366)
                      +- +..+...++-+.+.++++.
T Consensus        65 vk-P~~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          65 VK-PQDMEAACKNIRTNGALVL   85 (152)
T ss_dssp             SC-HHHHHHHHTTCCCTTCEEE
T ss_pred             cC-HHHHHHhHHHHhhcccEEe
Confidence            87 5567777777777666543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.88  E-value=0.0099  Score=48.77  Aligned_cols=96  Identities=20%  Similarity=0.261  Sum_probs=65.4

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      .....+++.+||=+|||. |..+..+++ .|+ .|++++.+++-.+.+++.    +...-+ +..+..++       .  
T Consensus        35 ~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~-~~~d~~~l-------~--  101 (251)
T d1wzna1          35 KEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEF-LQGDVLEI-------A--  101 (251)
T ss_dssp             HHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEE-EESCGGGC-------C--
T ss_pred             HHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchh-eehhhhhc-------c--
Confidence            445667788999999987 888888887 577 799999999887777653    322111 11221121       1  


Q ss_pred             hCCCCcEEEEcCCC------h---HHHHHHHHhhcCCceEEE
Q 017793          253 MGSGIDVSFDCVGF------D---KTMSTALNATRPGGKVCL  285 (366)
Q Consensus       253 ~~~~~d~vld~~g~------~---~~~~~~~~~l~~~G~~v~  285 (366)
                      .++.||+|+...+.      +   ..++.+.++|+|||.++.
T Consensus       102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            14579999875432      1   356778899999999875

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.77  E-value=0.0093  Score=49.45  Aligned_cols=97  Identities=18%  Similarity=0.164  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhhC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      .+++|++||-.|||. |.+++.+|+. |..+|++++.+++..+++++    .+.+. +..+..+..++.         ..
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~---------~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP---------GE  172 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC---------CC
T ss_pred             hcCCccEEEECcceE-cHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc---------cC
Confidence            368999999987654 5666777776 54489999999998887764    34432 322333322221         13


Q ss_pred             CCCcEEEEc-C-CChHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDC-V-GFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~-~-g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..+|.|+-. . .....+..+++.+++||.+....
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            568866532 2 23456778889999999876543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.74  E-value=0.028  Score=46.81  Aligned_cols=82  Identities=23%  Similarity=0.285  Sum_probs=53.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc--eeeecC---CCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD--ETAKVS---TDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~--~~~~~~---~~~~~~~~~~~~~~~~  252 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.+..  .+..+.   ++..+..+.+.+..+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            478899998 68999998888888999 788888988876543    333322  222111   2233444444444433


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                      . +.+|+++++.|.
T Consensus        82 ~-G~iDilVnnAG~   94 (274)
T d1xhla_          82 F-GKIDILVNNAGA   94 (274)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCceEEEeeccc
Confidence            3 479999999874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.036  Score=46.72  Aligned_cols=82  Identities=17%  Similarity=0.261  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcC-------CceeeecC---CCCcchHHHHHHHH
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG-------ADETAKVS---TDIEDVDTDVGKIQ  250 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg-------~~~~~~~~---~~~~~~~~~~~~~~  250 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +++.       ...++.+.   ++..+..+.+.+..
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            588999998 68999998888888999 788888888775433 3221       11222221   22334444444444


Q ss_pred             HhhCCCCcEEEEcCCC
Q 017793          251 NAMGSGIDVSFDCVGF  266 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~  266 (366)
                      +.. +++|+++++.|.
T Consensus        90 ~~~-G~iDiLVnnAg~  104 (297)
T d1yxma1          90 DTF-GKINFLVNNGGG  104 (297)
T ss_dssp             HHH-SCCCEEEECCCC
T ss_pred             HHh-CCeEEEEeeccc
Confidence            322 479999999875

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.66  E-value=0.021  Score=47.53  Aligned_cols=82  Identities=27%  Similarity=0.306  Sum_probs=53.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc--eeeecC---CCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD--ETAKVS---TDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~--~~~~~~---~~~~~~~~~~~~~~~~  252 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.    +.+..  .+..+.   ++..+..+.+.+..+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            477889998 68999998888888999 7888889888765443    23321  222111   2233444444444433


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+++|+++++.|.
T Consensus        83 -~g~iDilvnnAG~   95 (272)
T d1xkqa_          83 -FGKIDVLVNNAGA   95 (272)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -hCCceEEEeCCcc
Confidence             2579999999775

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.66  E-value=0.041  Score=44.56  Aligned_cols=73  Identities=16%  Similarity=0.188  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.   ++.+.... .|.       .+.+..+.+. -+.+|++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv-------~~~~~~~~~~-~g~iD~l   70 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDL-------RKDLDLLFEK-VKEVDIL   70 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCT-------TTCHHHHHHH-SCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcch-------HHHHHHHHHH-hCCCcEE
Confidence            478899998 68999999988888999 788888877654   45554322 122       1122222222 3579999


Q ss_pred             EEcCCCh
Q 017793          261 FDCVGFD  267 (366)
Q Consensus       261 ld~~g~~  267 (366)
                      +++.|..
T Consensus        71 VnnAG~~   77 (234)
T d1o5ia_          71 VLNAGGP   77 (234)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9998754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.65  E-value=0.003  Score=51.88  Aligned_cols=77  Identities=19%  Similarity=0.237  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+..    ...|. ++.++..+.+.++.+.. +++|+++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv-~~~~~v~~~~~~~~~~~-g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDV-TDSDAVDRAFTAVEEHQ-GPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCT-TCHHHHHHHHHHHHHHH-SSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEec-CCHHHHHHHHHHHHHhc-CCceEEE
Confidence            478899998 68999999988888999 78888877665432111    11222 23334444444444332 4799999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      ++.|.
T Consensus        79 nnAG~   83 (237)
T d1uzma1          79 SNAGL   83 (237)
T ss_dssp             EECSC
T ss_pred             eeecc
Confidence            99875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.64  E-value=0.048  Score=41.84  Aligned_cols=99  Identities=16%  Similarity=0.168  Sum_probs=57.5

Q ss_pred             HHHhCCC-CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eeeecCCCCcchHHHHHHHHH
Q 017793          175 ACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       175 ~l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      +++..+. .++.+|+|.|+|+.+.+++.-+...+ .++..+.++.++.+.+ +.++.. .+.....+.         .  
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~---------~--   75 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDS---------I--   75 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---------C--
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhcc---------c--
Confidence            4544333 46889999999999999888777655 4788888888876644 334311 111111100         0  


Q ss_pred             hhCCCCcEEEEcCCChHHHHH----HHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDCVGFDKTMST----ALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~----~~~~l~~~G~~v~~g  287 (366)
                       ....+|++++|++.. ....    ..+.+.++..++.+-
T Consensus        76 -~~~~~diiIN~tp~g-~~~~~~~~~~~~~~~~~~~~D~v  113 (171)
T d1p77a1          76 -PLQTYDLVINATSAG-LSGGTASVDAEILKLGSAFYDMQ  113 (171)
T ss_dssp             -CCSCCSEEEECCCC--------CCCHHHHHHCSCEEESC
T ss_pred             -cccccceeeeccccc-ccccccchhhhhhcccceeeeee
Confidence             135799999998754 1111    123344555555543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=95.61  E-value=0.05  Score=44.48  Aligned_cols=82  Identities=22%  Similarity=0.209  Sum_probs=54.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCcee---eecCCCCcchHHHHHHHHHhhCCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.++++++  ..+.++++|....   .|. ++..+..+.+.++.+. -++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv-s~~~~v~~~~~~~~~~-~G~   80 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-SQPGDVEAFGKQVIST-FGR   80 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-HSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeC-CCHHHHHHHHHHHHHH-cCC
Confidence            478889998 68999999988888999 6777776553  3345566765422   222 2334444444444432 257


Q ss_pred             CcEEEEcCCCh
Q 017793          257 IDVSFDCVGFD  267 (366)
Q Consensus       257 ~d~vld~~g~~  267 (366)
                      +|+++++.|..
T Consensus        81 iDilVnnAG~~   91 (247)
T d2ew8a1          81 CDILVNNAGIY   91 (247)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999998763

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.58  E-value=0.022  Score=47.18  Aligned_cols=82  Identities=24%  Similarity=0.268  Sum_probs=52.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc--eeeecC---CCCcchHHHHHHHHHh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD--ETAKVS---TDIEDVDTDVGKIQNA  252 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~--~~~~~~---~~~~~~~~~~~~~~~~  252 (366)
                      +|..+||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.    +.+..  .+..+.   ++..+..+.+.+..+.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            477888888 68999998888888899 7888889888765432    33322  222121   2233344444444332


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                       -+++|+++++.|.
T Consensus        83 -~g~iDilvnnAG~   95 (264)
T d1spxa_          83 -FGKLDILVNNAGA   95 (264)
T ss_dssp             -HSCCCEEEECCC-
T ss_pred             -hCCCCEeeccccc
Confidence             3579999999874

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.58  E-value=0.011  Score=50.56  Aligned_cols=100  Identities=14%  Similarity=0.093  Sum_probs=62.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+|++||=.+||. |.+++++|+  |+..|++++.+++..+.+++    .|.+.+-...   .+..+.++.+.. .+..|
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~---~d~~~~~~~~~~-~~~~f  216 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLE---ANAFDLLRRLEK-EGERF  216 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEE---SCHHHHHHHHHH-TTCCE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceee---ccHHHHhhhhHh-hhcCC
Confidence            3689999887544 445566664  34489999999998887764    4554321111   233344443332 25679


Q ss_pred             cEEEEcCCC---------------hHHHHHHHHhhcCCceEEEEcc
Q 017793          258 DVSFDCVGF---------------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       258 d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      |+|+--.+.               ......+++.|+|||.++...-
T Consensus       217 D~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            999753221               0245567888999999887643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=95.56  E-value=0.058  Score=44.30  Aligned_cols=81  Identities=17%  Similarity=0.281  Sum_probs=53.1

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhCC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      |..+||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.|....   .|. ++.++..+.+.++.+. -+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv-s~~~~v~~~~~~~~~~-~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDV-RSVPEIEALVAAVVER-YG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-TC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeec-CCHHHHHHHHHHHHHH-hC
Confidence            45678898 68999998888888899 688888888765533    34454321   222 2333444444444432 35


Q ss_pred             CCcEEEEcCCCh
Q 017793          256 GIDVSFDCVGFD  267 (366)
Q Consensus       256 ~~d~vld~~g~~  267 (366)
                      ++|+++++.|..
T Consensus        79 ~iDilVnnAG~~   90 (257)
T d2rhca1          79 PVDVLVNNAGRP   90 (257)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEeccccc
Confidence            799999998763

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.51  E-value=0.14  Score=38.45  Aligned_cols=89  Identities=13%  Similarity=0.189  Sum_probs=62.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|-|+|.|.+|...++-+...|. .|++.++++++.+.+.+.++...       .+..+..        ...|++|-|+.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~--------~~~d~ii~~v~   65 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-------STAKAIA--------EQCDVIITMLP   65 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECCS
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-------ccHHHHH--------hCCCeEEEEcC
Confidence            57889999999887776667898 78899999999998888876432       1112221        24799999998


Q ss_pred             ChHHHHHH-------HHhhcCCceEEEEcccC
Q 017793          266 FDKTMSTA-------LNATRPGGKVCLIGLAK  290 (366)
Q Consensus       266 ~~~~~~~~-------~~~l~~~G~~v~~g~~~  290 (366)
                      .+......       ...+.++..++..+...
T Consensus        66 ~~~~v~~v~~~~~~~~~~~~~g~iiid~sT~~   97 (161)
T d1vpda2          66 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIA   97 (161)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred             CHHHHHHHHhCCcchhhccCCCCEEEECCCCC
Confidence            76555543       34456666666665444

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=95.48  E-value=0.037  Score=45.68  Aligned_cols=82  Identities=18%  Similarity=0.236  Sum_probs=51.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh-HH----HHHHHcCCcee---eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RL----SIARNLGADET---AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~----~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +|.++||.| ++++|.+.++.+...|+ +|+.++++.+ ..    +.+++.+.+..   .|. ++..+..+.+++..+..
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDV-TVESDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHHh
Confidence            478889998 68999998888888899 6777766543 33    23445564322   122 22334444444444333


Q ss_pred             CCCCcEEEEcCCCh
Q 017793          254 GSGIDVSFDCVGFD  267 (366)
Q Consensus       254 ~~~~d~vld~~g~~  267 (366)
                       +++|+++++.|..
T Consensus        84 -G~iDiLVnnAG~~   96 (261)
T d1geea_          84 -GKLDVMINNAGLE   96 (261)
T ss_dssp             -SCCCEEEECCCCC
T ss_pred             -CCCCEeeccceec
Confidence             4799999998763

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.45  E-value=0.076  Score=43.23  Aligned_cols=100  Identities=19%  Similarity=0.259  Sum_probs=61.4

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEE-EcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhCCC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIII-TDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~-v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      .+||.| ++++|.+.++.+...|+ .|+. ..++++..+.+    ++.|....   .|. ++.++..+.+.++.+. -++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~   79 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV-SKEADVEAMMKTAIDA-WGT   79 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCT-TSHHHHHHHHHHHHHH-SSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHHHHHH-cCC
Confidence            467778 68999998888888999 4554 45566554433    34554321   122 2233444444444433 357


Q ss_pred             CcEEEEcCCCh-------------------------HHHHHHHHhh--cCCceEEEEcc
Q 017793          257 IDVSFDCVGFD-------------------------KTMSTALNAT--RPGGKVCLIGL  288 (366)
Q Consensus       257 ~d~vld~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~  288 (366)
                      +|+++++.|..                         ...+.++..|  ..+|+++.++.
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS  138 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS  138 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence            99999998753                         1334455555  56899998874

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.40  E-value=0.021  Score=45.19  Aligned_cols=48  Identities=27%  Similarity=0.429  Sum_probs=43.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  231 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  231 (366)
                      .|.+|+|.|.|.+|..+.+++...|+ ++++++.+.++.....++|.+.
T Consensus        26 ~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~   73 (201)
T d1c1da1          26 DGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTA   73 (201)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhcccc
Confidence            68899999999999999999999999 7999999999988888888754

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.29  E-value=0.042  Score=43.04  Aligned_cols=99  Identities=11%  Similarity=0.246  Sum_probs=63.6

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eeeecCCCCcchHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD--ETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~~~~~  249 (366)
                      ++.....++++||=+|||. |..++.+++. +. .+.+++.+++..+.+++    .+..  .+.....   ++.+.   +
T Consensus        45 i~~l~~~~~~~VLDiGcG~-G~~~~~la~~-~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~---d~~~~---~  115 (194)
T d1dusa_          45 VENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DLYEN---V  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---STTTT---C
T ss_pred             HHhCCcCCCCeEEEEeecC-ChhHHHHHhh-cc-ccceeeeccccchhHHHHHHHhCCccceEEEEEc---chhhh---h
Confidence            3567788999999999876 6677777763 44 79999999988777764    2332  2211111   11111   1


Q ss_pred             HHhhCCCCcEEEEcCC---Ch----HHHHHHHHhhcCCceEEEE
Q 017793          250 QNAMGSGIDVSFDCVG---FD----KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g---~~----~~~~~~~~~l~~~G~~v~~  286 (366)
                         ....+|+|+-...   +.    ..++.+.+.|+++|+++.+
T Consensus       116 ---~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         116 ---KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ---TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence               1457999987432   22    2466778899999998653

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.26  E-value=0.054  Score=41.52  Aligned_cols=101  Identities=19%  Similarity=0.149  Sum_probs=64.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEE-cCCh-hHHHHHHHcCCceeeecCCCCcchHHHHHH--------HHHhhC
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIIT-DVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGK--------IQNAMG  254 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v-~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~--------~~~~~~  254 (366)
                      +|.|.|.|-+|....+.+... .. .++++ +.++ ....++.+.+.+......   ... ....+        +.+ ..
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~-~~   77 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASE---EFI-PRFEKEGFEVAGTLND-LL   77 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSG---GGH-HHHHHHTCCCSCBHHH-HH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccc---cce-eeecccCccccchhhh-hh
Confidence            689999999999888777644 35 34444 4333 445566777765433211   111 11111        000 01


Q ss_pred             CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC
Q 017793          255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE  292 (366)
Q Consensus       255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  292 (366)
                      .++|+|+||.|.-...+.+-.++..|-+.+..+.+..+
T Consensus        78 ~~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~~  115 (172)
T d2czca2          78 EKVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKAD  115 (172)
T ss_dssp             TTCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCGG
T ss_pred             ccCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCCcc
Confidence            47999999999877777888889999999988765543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.23  E-value=0.039  Score=43.32  Aligned_cols=93  Identities=17%  Similarity=0.258  Sum_probs=60.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++.+||-+||| .|..+..+++. |. .|++++.+++..+.+++    .+.+.+.....+..++         .....||
T Consensus        30 ~~grvLDiGcG-~G~~~~~la~~-g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~---------~~~~~fD   97 (198)
T d2i6ga1          30 APGRTLDLGCG-NGRNSLYLAAN-GY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL---------TFDGEYD   97 (198)
T ss_dssp             CSCEEEEETCT-TSHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC---------CCCCCEE
T ss_pred             CCCcEEEECCC-CCHHHHHHHHH-hh-hhccccCcHHHHHHHHHHhhhccccchhhhheecccc---------ccccccc
Confidence            34489999998 58888888874 87 79999999987776543    4444221111111111         0135699


Q ss_pred             EEEEcC-----CCh---HHHHHHHHhhcCCceEEEEc
Q 017793          259 VSFDCV-----GFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       259 ~vld~~-----g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +|+...     ...   ..+..+.++|+++|.++...
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1          98 FILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             EEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            998633     111   36667888899999988764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.15  E-value=0.088  Score=43.11  Aligned_cols=79  Identities=20%  Similarity=0.263  Sum_probs=51.0

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .+||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.|....   .|. ++.++..+.+.++.+. -+++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~i   79 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDV-SDRDQVFAAVEQARKT-LGGF   79 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHH-TTCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHHH-hCCc
Confidence            358888 68999998877777899 788888988876543    34454321   222 2233444444444332 3579


Q ss_pred             cEEEEcCCCh
Q 017793          258 DVSFDCVGFD  267 (366)
Q Consensus       258 d~vld~~g~~  267 (366)
                      |+++++.|..
T Consensus        80 DilVnnAG~~   89 (255)
T d1gega_          80 DVIVNNAGVA   89 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEeccccc
Confidence            9999998753

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.13  E-value=0.033  Score=45.81  Aligned_cols=87  Identities=18%  Similarity=0.264  Sum_probs=51.3

Q ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh----H---HHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          179 ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ----R---LSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       179 ~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~----~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      ..++|+.++||.| +|++|.+.++.+...|++.++.+.+++.    .   .+.+++.|.... .+..+-.+.. .++.+.
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~-~~~~Dv~d~~-~~~~~~   81 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTT-VAACDVTDRE-SVRELL   81 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHH-HHHHHH
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcccccc-ccccccchHH-HHHHhh
Confidence            3588999999998 6999998887777779866666655432    1   223344565432 1222222222 233332


Q ss_pred             Hh--hCCCCcEEEEcCCCh
Q 017793          251 NA--MGSGIDVSFDCVGFD  267 (366)
Q Consensus       251 ~~--~~~~~d~vld~~g~~  267 (366)
                      ..  ....+|.++.+.|..
T Consensus        82 ~~i~~~~~i~~vv~~ag~~  100 (259)
T d2fr1a1          82 GGIGDDVPLSAVFHAAATL  100 (259)
T ss_dssp             HTSCTTSCEEEEEECCCCC
T ss_pred             ccccccccccccccccccc
Confidence            21  124688899988753

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.031  Score=47.47  Aligned_cols=96  Identities=21%  Similarity=0.280  Sum_probs=56.0

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH---HHHHcCCc-eeeecCCCCcchHHHHHHHHHhhC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ..+.++.+||-+||| .|..++.+|+ .|+.+|++++.++.-..   ..++.+.. .+.....+..++.        ...
T Consensus        31 ~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~--------~~~  100 (311)
T d2fyta1          31 PHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH--------LPV  100 (311)
T ss_dssp             GGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--------CSC
T ss_pred             cccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhc--------Ccc
Confidence            456789999999987 4777777666 58879999998886432   22334432 2222222222211        113


Q ss_pred             CCCcEEEEcCC-----Ch----HHHHHHHHhhcCCceEE
Q 017793          255 SGIDVSFDCVG-----FD----KTMSTALNATRPGGKVC  284 (366)
Q Consensus       255 ~~~d~vld~~g-----~~----~~~~~~~~~l~~~G~~v  284 (366)
                      ..+|+|+...-     ..    ......-+.|+|+|+++
T Consensus       101 ~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         101 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             ccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            57999975221     11    12223345789999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.08  E-value=0.14  Score=41.53  Aligned_cols=102  Identities=18%  Similarity=0.211  Sum_probs=62.6

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCC------eEEEEcCChhHHHHHH----HcCCcee---eecCCCCcchHHHHHHHHH
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAP------RIIITDVDVQRLSIAR----NLGADET---AKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~------~vv~v~~~~~~~~~~~----~lg~~~~---~~~~~~~~~~~~~~~~~~~  251 (366)
                      .|||.| ++++|.+.++.+...|++      .++.+++++++.+.+.    +.|....   .|. ++.++..+.+.++.+
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADI-SDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHH
Confidence            468888 689999877777777884      3777788887765432    2343221   122 233344444444443


Q ss_pred             hhCCCCcEEEEcCCCh----------H---------------HHHHHHHhh--cCCceEEEEccc
Q 017793          252 AMGSGIDVSFDCVGFD----------K---------------TMSTALNAT--RPGGKVCLIGLA  289 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~  289 (366)
                      . -+.+|+++++.|..          +               ..+..+..|  ..+|+++.++..
T Consensus        82 ~-~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~  145 (240)
T d2bd0a1          82 R-YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSV  145 (240)
T ss_dssp             H-TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             H-cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEech
Confidence            2 35799999998753          1               334455555  357899888643

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.18  Score=37.93  Aligned_cols=100  Identities=21%  Similarity=0.279  Sum_probs=69.0

Q ss_pred             HHHHHHh--CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          172 GVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       172 a~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .+.++.+  ...-.|.+++|.|-|-+|.-..+.++..|+ +|++++.++-+.-.+.--|... .       .    +.+.
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~v-~-------~----~~~a   76 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYEV-T-------T----MDEA   76 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------C----HHHH
T ss_pred             HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceEe-e-------e----hhhh
Confidence            4455533  445689999999999999999999999999 8999999886644443334322 1       1    1112


Q ss_pred             HHhhCCCCcEEEEcCCChH-HHHHHHHhhcCCceEEEEcc
Q 017793          250 QNAMGSGIDVSFDCVGFDK-TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~g~  288 (366)
                          -...|+++-+.|... .-...++.|+++..+.-.|-
T Consensus        77 ----~~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          77 ----CQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             ----TTTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSS
T ss_pred             ----hhhccEEEecCCCccchhHHHHHhccCCeEEEEecc
Confidence                245899999999753 33456677888876655553

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.03  E-value=0.011  Score=49.92  Aligned_cols=100  Identities=16%  Similarity=0.177  Sum_probs=62.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceee-ecCCCCcchHHHHHHHHHhhCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETA-KVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+++.+||=+|||. |..++.+++. |+ .|++++.+++-.+.+++.    +..... .......++...-..+  ....
T Consensus        54 ~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  128 (292)
T d1xvaa_          54 QHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV--PAGD  128 (292)
T ss_dssp             HTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS--CCTT
T ss_pred             hcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccccc--CCCC
Confidence            35678999999887 8888899885 87 799999999887777542    211100 0000001221111111  1246


Q ss_pred             CCcEEEEcCCC--------------hHHHHHHHHhhcCCceEEE
Q 017793          256 GIDVSFDCVGF--------------DKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       256 ~~d~vld~~g~--------------~~~~~~~~~~l~~~G~~v~  285 (366)
                      .+|.|+.....              ...+..+.+.|+|||.++.
T Consensus       129 ~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         129 GFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             CEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            79999864321              1257888899999999876

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.02  E-value=0.1  Score=40.26  Aligned_cols=91  Identities=14%  Similarity=0.119  Sum_probs=60.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      ++.|+|+|.+|..-++.++.. +++.+.+.+.++++.+ ++++++.... ..+    .++.    ++.+  ...+|+|+-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~----~ll~--~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GSYE----SLLE--DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHH----HHHH--CTTCCEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----CcHH----Hhhh--ccccceeee
Confidence            688999999998877777766 5643444577777654 4566664321 111    1332    3332  457999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEc
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +.....+.+.+..++..+=. +++.
T Consensus        73 ~tp~~~h~~~~~~~l~~g~~-v~~E   96 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEKGKH-ILLE   96 (184)
T ss_dssp             CCCGGGHHHHHHHHHTTTCE-EEEC
T ss_pred             cccchhhcchhhhhhhccce-eecc
Confidence            99988889898888887644 4454

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.97  E-value=0.067  Score=42.83  Aligned_cols=96  Identities=20%  Similarity=0.223  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHC---CCCeEEEEcCChhHHHHHHHc----CCceeee-cCCCCcchHHHHHHHHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAF---GAPRIIITDVDVQRLSIARNL----GADETAK-VSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~---g~~~vv~v~~~~~~~~~~~~l----g~~~~~~-~~~~~~~~~~~~~~~~~  251 (366)
                      ..+++.+||-+|||. |..+..+++..   ++ +|+++|.+++-.+.+++.    +....+. ...+..++         
T Consensus        36 ~~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~---------  104 (225)
T d1im8a_          36 FVTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV---------  104 (225)
T ss_dssp             HCCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC---------
T ss_pred             hcCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc---------
Confidence            368999999999876 77777888753   55 899999999988877652    3222111 11111111         


Q ss_pred             hhCCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                       ....+|+++-+..-        ...+..+.+.|+|+|.++...
T Consensus       105 -~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         105 -EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             -CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence             13456776553221        146888999999999998764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.95  E-value=0.095  Score=39.42  Aligned_cols=94  Identities=22%  Similarity=0.302  Sum_probs=54.7

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHCCCCeEEEE-cCCh--hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          185 TNVMIMGSGPIGL-VTLLAARAFGAPRIIIT-DVDV--QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       185 ~~vlI~G~g~vG~-~ai~la~~~g~~~vv~v-~~~~--~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      -++.|+|+|.+|. ..+++++....-.++++ +++.  ....+++++|......      .. +.+.+..  ...++|+|
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~------~~-d~l~~~~--~~~~iDiV   75 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA------GV-EGLIKLP--EFADIDFV   75 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS------HH-HHHHHSG--GGGGEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc------ce-eeeeecc--cccccCEE
Confidence            4789999999986 56778776543244444 4444  3456788888654211      11 1111111  12469999


Q ss_pred             EEcCCChHHHHHHH--HhhcCCceEEEEc
Q 017793          261 FDCVGFDKTMSTAL--NATRPGGKVCLIG  287 (366)
Q Consensus       261 ld~~g~~~~~~~~~--~~l~~~G~~v~~g  287 (366)
                      |++.+...+....+  +.++.|-.++...
T Consensus        76 f~ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          76 FDATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            99988665655443  3355555555543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=94.93  E-value=0.06  Score=44.28  Aligned_cols=81  Identities=17%  Similarity=0.266  Sum_probs=53.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-----HHHHcCCcee---eecCCCCcchHHHHHHHHHhh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-----IARNLGADET---AKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+     +.++.|....   .|. ++.++..+.+.++.+. 
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~-   84 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-SNTDIVTKTIQQIDAD-   84 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-TCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccC-CCHHHHHHHHHHHHHH-
Confidence            478899998 68999998888888999 6888877766543     2234454321   222 2333444444444432 


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      -+++|+++++.|.
T Consensus        85 ~g~iDilVnnAg~   97 (260)
T d1h5qa_          85 LGPISGLIANAGV   97 (260)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             hCCCcEecccccc
Confidence            4589999999874

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.89  E-value=0.068  Score=45.06  Aligned_cols=99  Identities=13%  Similarity=0.122  Sum_probs=66.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--------eeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--------ETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ....+|||+|.|. |..+-.+++.....+|.+++-+++-.+.++++-..        .+-.+   ..|..+.+++    .
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~---i~Da~~~l~~----~  176 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF---CGDGFEFLKN----H  176 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE---CSCHHHHHHH----C
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEE---EchHHHHHHh----C
Confidence            4567999998766 55677888877777899999999999988885321        11111   1244444433    3


Q ss_pred             CCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEcc
Q 017793          254 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ...+|+||--...          .+.+..+.++|+++|.++.-..
T Consensus       177 ~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~  221 (312)
T d2b2ca1         177 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE  221 (312)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence            6789999743221          1356677889999999988653

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=94.80  E-value=0.22  Score=39.11  Aligned_cols=94  Identities=11%  Similarity=0.069  Sum_probs=63.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .||=+|||. |..++.+|+..--..+++++.++.....+    ++.+.+.+..+..+...+   ...+   ....+|.|+
T Consensus        32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l---~~~~---~~~~~d~v~  104 (204)
T d2fcaa1          32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL---TDVF---EPGEVKRVY  104 (204)
T ss_dssp             EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH---HHHC---CTTSCCEEE
T ss_pred             eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhh---hccc---Cchhhhccc
Confidence            455579887 88999999987444899999998866544    456776554433332222   2112   245688887


Q ss_pred             EcCCCh--------------HHHHHHHHhhcCCceEEEE
Q 017793          262 DCVGFD--------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       262 d~~g~~--------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      -....+              ..+..+.+.|+|||.+.+.
T Consensus       105 i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         105 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             cccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            654432              5788899999999998765

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.80  E-value=0.048  Score=45.71  Aligned_cols=99  Identities=22%  Similarity=0.277  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ...++|||+|.|. |..+-.+++..+..++.+++-+++-.+.++++-.        +.+..+.   .|-.+.++   ...
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~---~Da~~~l~---~~~  151 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---GDGVAFLK---NAA  151 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---SCHHHHHH---TSC
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE---ccHHHHHh---hcc
Confidence            4568999998665 5667788888787789999999998888887531        1111111   23233332   222


Q ss_pred             CCCCcEEE-EcCC---------ChHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSF-DCVG---------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vl-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+.+|+|| |+..         +.+.++.+.++|+++|.++.-.
T Consensus       152 ~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         152 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            45799885 4332         2357888999999999998764

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.74  E-value=0.029  Score=46.53  Aligned_cols=96  Identities=19%  Similarity=0.126  Sum_probs=66.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ..++.+||=+|+|. |..+..+++...-..++++|.+++..+.+++......... .+..++.        .....||+|
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~-~d~~~l~--------~~~~sfD~v  151 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCV-ASSHRLP--------FSDTSMDAI  151 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEE-CCTTSCS--------BCTTCEEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhccccccccee-eehhhcc--------CCCCCEEEE
Confidence            46778999999877 7788888887532379999999998888876543321111 1111111        014569999


Q ss_pred             EEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          261 FDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +.... ..++....+.|+|||.++...
T Consensus       152 ~~~~~-~~~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         152 IRIYA-PCKAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             EEESC-CCCHHHHHHHEEEEEEEEEEE
T ss_pred             eecCC-HHHHHHHHHHhCCCcEEEEEe
Confidence            87654 457888999999999998764

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.73  E-value=0.016  Score=39.56  Aligned_cols=35  Identities=29%  Similarity=0.305  Sum_probs=30.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .|.+|+|+|.|..|+.+++++...|+ .|.+.+.++
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            46789999999999999999999999 677777644

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.71  E-value=0.042  Score=46.78  Aligned_cols=95  Identities=18%  Similarity=0.237  Sum_probs=56.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH---HHHHcCCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .+.+|++||-+|+|. |..++.+|+ .|+.+|++++.++.-..   .+++.+... +.....+..++.        ....
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~--------~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE--------LPVE   99 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC--------CSSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcc--------cccc
Confidence            356899999999875 777776666 68878999998874322   223344322 222112212211        1135


Q ss_pred             CCcEEEEcCCC---------hHHHHHHHHhhcCCceEE
Q 017793          256 GIDVSFDCVGF---------DKTMSTALNATRPGGKVC  284 (366)
Q Consensus       256 ~~d~vld~~g~---------~~~~~~~~~~l~~~G~~v  284 (366)
                      .+|+++.....         +..+...-+.|+|+|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            68998653221         124455667899999875

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.58  E-value=0.24  Score=39.55  Aligned_cols=102  Identities=15%  Similarity=0.134  Sum_probs=69.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh--hC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA--MG  254 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~--~~  254 (366)
                      ....+||-+|++. |..++.+|+.+.- .+++.++.+++..+.+++    .|...-+.+..  .+..+.+.++...  ..
T Consensus        58 ~~~k~iLEiGT~~-GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~--g~a~~~L~~l~~~~~~~  134 (227)
T d1susa1          58 INAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDEKNH  134 (227)
T ss_dssp             HTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCGGGT
T ss_pred             cCCCcEEEecchh-hhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee--hHHHHHHHHHHhccccC
Confidence            4568999999754 8888889987742 389999999988776654    46544333222  3555556655432  24


Q ss_pred             CCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +.||.||--...   ...++.++++|++||.++.=
T Consensus       135 ~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         135 GSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             TCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence            579999643322   24677889999999988764

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.54  E-value=0.26  Score=36.46  Aligned_cols=40  Identities=23%  Similarity=0.424  Sum_probs=32.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRL  221 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~  221 (366)
                      +.+.+|.|+|+|.+|......+...+ ++.++.+|.++++.
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~   44 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKA   44 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccc
Confidence            34678999999999988887777766 45789999888763

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.52  E-value=0.099  Score=39.65  Aligned_cols=129  Identities=13%  Similarity=0.154  Sum_probs=74.7

Q ss_pred             EEEEECCCHHHHH-HHHHHHHC-CCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMGSGPIGLV-TLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G~g~vG~~-ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +|.|+|+|.+|.. .+...+.. +. .+++++.++++.+ +.++++.....  .    ++.+.+       ...+|+|+-
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~--~----~~~~ll-------~~~iD~V~I   68 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATC--T----DYRDVL-------QYGVDAVMI   68 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCC--S----STTGGG-------GGCCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhccccccc--c----cHHHhc-------ccccceecc
Confidence            6889999999854 45555555 44 5667778877665 44567765432  1    222221       235999999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeec---hH-hhhcCcEEE-EeeccCCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL---TP-AAAREVDVI-GIFRYRSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~  329 (366)
                      |+....+.+.+..++..|=. +++.-+........   .. .-..+..+. +...+...+.++.+.+..|++
T Consensus        69 ~tp~~~H~~~~~~al~~gk~-V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~r~~~~~~~~~~~~~~G~i  139 (167)
T d1xeaa1          69 HAATDVHSTLAAFFLHLGIP-TFVDKPLAASAQECENLYELAEKHHQPLYVGFNGFDAMVQDWLQVAAAGKL  139 (167)
T ss_dssp             CSCGGGHHHHHHHHHHTTCC-EEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGTHHHHHHHHHHHHHHTCC
T ss_pred             cccccccccccccccccccc-cccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeCcCCHHHHHHHHHhhcCCC
Confidence            99988888889888887654 44543222111111   11 122233232 322223346667777777777

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=94.50  E-value=0.098  Score=43.16  Aligned_cols=82  Identities=15%  Similarity=0.153  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CC--HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH---H-cCCceeeec-CCCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SG--PIGLVTLLAARAFGAPRIIITDVDVQRLSIAR---N-LGADETAKV-STDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~---~-lg~~~~~~~-~~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| +|  ++|.+.++.+...|+ .|+.++++++..+.++   + .+...+... ..+..+..+.+.+..+ .-
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-DL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH-Hc
Confidence            588999998 45  799998888888999 6777777764333332   2 222222211 1223344444444443 24


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      +.+|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            679999988875

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.72  Score=39.39  Aligned_cols=113  Identities=23%  Similarity=0.335  Sum_probs=74.0

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceeeecC----------------
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVS----------------  236 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~----------------  236 (366)
                      +.+...++++..|+...+|..|.+....|+.+|.+-++++.  .+++|.+.++.+|++.+..-.                
T Consensus        88 a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~  167 (355)
T d1jbqa_          88 AERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWR  167 (355)
T ss_dssp             HHHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHH
T ss_pred             HHHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHH
Confidence            34556677777776667899999999999999995555553  455788899999997543210                


Q ss_pred             ------------C--CCc----chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHH---HHhhcCCceEEEEc
Q 017793          237 ------------T--DIE----DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA---LNATRPGGKVCLIG  287 (366)
Q Consensus       237 ------------~--~~~----~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~---~~~l~~~G~~v~~g  287 (366)
                                  .  ...    .......++.++.+..+|.++.++|+..++.-.   ++...+.-+++.+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~ve  239 (355)
T d1jbqa_         168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVD  239 (355)
T ss_dssp             HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeec
Confidence                        0  000    111122234444456799999999987655543   34456777887764

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.38  E-value=0.033  Score=45.40  Aligned_cols=91  Identities=19%  Similarity=0.202  Sum_probs=60.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      .++.+||=+|||. |..+..+++. |. .+++++.+++-.+.+++    .+...-+ +..+..++       .  ..+.|
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~~-g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~-~~~d~~~~-------~--~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCPK-FK-NTWAVDLSQEMLSEAENKFRSQGLKPRL-ACQDISNL-------N--INRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGGG-SS-EEEEECSCHHHHHHHHHHHHHTTCCCEE-ECCCGGGC-------C--CSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHHh-CC-ccEeeccchhhhhhccccccccCcccee-eccchhhh-------c--ccccc
Confidence            4567999999885 8888888874 77 79999999987777654    3432111 11211111       1  14579


Q ss_pred             cEEEEcCCC------h----HHHHHHHHhhcCCceEEE
Q 017793          258 DVSFDCVGF------D----KTMSTALNATRPGGKVCL  285 (366)
Q Consensus       258 d~vld~~g~------~----~~~~~~~~~l~~~G~~v~  285 (366)
                      |+|+...+.      .    ..++.+.++|++||.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            999864321      1    256778889999999875

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.30  E-value=0.18  Score=37.52  Aligned_cols=84  Identities=12%  Similarity=0.170  Sum_probs=57.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|.++|+|.+|.+.+.-....|. .+++.+++.++.+.+ +++|....    .   +..+    ..    ...|+||-|+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~----~---~~~~----~~----~~~dvIilav   65 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA----M---SHQD----LI----DQVDLVILGI   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC----S---SHHH----HH----HTCSEEEECS
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee----c---hhhh----hh----hccceeeeec
Confidence            57889999999887765555676 677888888876654 66775432    1   1111    21    2589999999


Q ss_pred             CChHHHHHHHHhhcCCceEEEE
Q 017793          265 GFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       265 g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      - +..+...++.+.++..++.+
T Consensus        66 k-p~~~~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          66 K-PQLFETVLKPLHFKQPIISM   86 (152)
T ss_dssp             C-GGGHHHHHTTSCCCSCEEEC
T ss_pred             c-hHhHHHHhhhcccceeEecc
Confidence            7 45677777888887776654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.27  E-value=0.087  Score=44.69  Aligned_cols=100  Identities=14%  Similarity=0.039  Sum_probs=63.0

Q ss_pred             CCCCCCEEEEEC--CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eeeecCCCCcchHHHHHHHHH
Q 017793          180 NVGPETNVMIMG--SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD--ETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       180 ~~~~~~~vlI~G--~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      .+.+|++||=..  +|+.+   +..+ ..|+..|++++.++...+.+++    .|.+  .+-.+   ..+..+.++....
T Consensus       141 ~~~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i---~~d~~~~l~~~~~  213 (317)
T d2b78a2         141 GSAAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLV---VMDVFDYFKYARR  213 (317)
T ss_dssp             TTTBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEE---ESCHHHHHHHHHH
T ss_pred             HhhCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEE---EccHHHHHHHHHh
Confidence            466899999874  45544   3333 3688789999999988887764    2332  11111   1344455554433


Q ss_pred             hhCCCCcEEEEcCCC---------------hHHHHHHHHhhcCCceEEEEc
Q 017793          252 AMGSGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ~~~~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                       .+..||+||---+.               ......++++|+|||.++...
T Consensus       214 -~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~s  263 (317)
T d2b78a2         214 -HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST  263 (317)
T ss_dssp             -TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             -hcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence             25679999753221               135667888999999988764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.21  E-value=0.12  Score=42.26  Aligned_cols=82  Identities=17%  Similarity=0.236  Sum_probs=48.6

Q ss_pred             CCCEEEEEC-CC--HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793          183 PETNVMIMG-SG--PIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVS-TDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       183 ~~~~vlI~G-~g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (366)
                      +|.++||.| +|  ++|.+.+..+...|+ +|+.+.++++..+.++    ..+.......+ .+..+......+.. ...
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   81 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG-KVW   81 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhh-hcc
Confidence            588999998 45  688887777778899 5777777766544433    34433332221 22222222222222 235


Q ss_pred             CCCcEEEEcCCC
Q 017793          255 SGIDVSFDCVGF  266 (366)
Q Consensus       255 ~~~d~vld~~g~  266 (366)
                      ...|+.+++.+.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            678999988654

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.16  E-value=0.093  Score=43.46  Aligned_cols=98  Identities=14%  Similarity=0.139  Sum_probs=66.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-----C--c-eeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-----A--D-ETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----~--~-~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ....+|||+|.|. |..+-.+++..+..+|.+++-+++-.+.++++-     +  + .+..+.   .|....+++    .
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~---~D~~~~l~~----~  145 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDGFMHIAK----S  145 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCSHHHHHT----C
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe---chHHHHHhh----c
Confidence            4568999998766 667777888777779999999999888887753     1  1 111111   233333332    3


Q ss_pred             CCCCcEEEE-cCC---------ChHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFD-CVG---------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld-~~g---------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +..+|+|+- ...         +.+.++.+.++|+++|.++.-.
T Consensus       146 ~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            578999963 322         2356888999999999998764

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.15  E-value=0.046  Score=45.89  Aligned_cols=99  Identities=16%  Similarity=0.135  Sum_probs=64.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHhh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      ....+|||+|+|. |..+-.+++..+..+|.+++-+++-.+.++++-.        +.+..+.   .|..+.++    ..
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~---~Da~~~l~----~~  159 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAEYVR----KF  159 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHGG----GC
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh---hhHHHHHh----cC
Confidence            4468999998665 5567778887777789999999998888877431        1111111   23333332    23


Q ss_pred             CCCCcEEEE-cCC----------ChHHHHHHHHhhcCCceEEEEcc
Q 017793          254 GSGIDVSFD-CVG----------FDKTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       254 ~~~~d~vld-~~g----------~~~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +..+|+||- +..          +.+.+..+.++|+++|.++.-..
T Consensus       160 ~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         160 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            567999963 221          12467788899999999887643

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.13  E-value=0.071  Score=45.50  Aligned_cols=95  Identities=18%  Similarity=0.231  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhH---HHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR---LSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~---~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ...+|.+||-+|||. |..++.+|+ .|+..|++++.++.-   .+..++.+... +.....+..++.        ....
T Consensus        35 ~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~--------~~~~  104 (328)
T d1g6q1_          35 DLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH--------LPFP  104 (328)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--------CSSS
T ss_pred             ccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhcc--------Cccc
Confidence            345789999999875 666665555 688899999988631   22233445332 222222212211        0135


Q ss_pred             CCcEEEEcCCC-----h----HHHHHHHHhhcCCceEE
Q 017793          256 GIDVSFDCVGF-----D----KTMSTALNATRPGGKVC  284 (366)
Q Consensus       256 ~~d~vld~~g~-----~----~~~~~~~~~l~~~G~~v  284 (366)
                      .+|+|+...-.     .    ..+...-+.|+|+|+++
T Consensus       105 ~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            79998763221     1    23444457899999874

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.12  E-value=0.56  Score=34.59  Aligned_cols=97  Identities=21%  Similarity=0.225  Sum_probs=62.3

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHC--CCCeEEEEcCChh---HHHHHHHcCCceeeecCCCCcchHHHHHH----------
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAF--GAPRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVGK----------  248 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~--g~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~----------  248 (366)
                      .+|.|+| +|.+|..+.++.+..  .+ +|++......   =.+++++|.+..+...+.  ... ..+..          
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~--~~~-~~l~~~~~~~~~~v~   78 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP--SLY-NDLKEALAGSSVEAA   78 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG--GGH-HHHHHHTTTCSSEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH--HHH-HHHHHHhhhcccccc
Confidence            6899999 699999999999975  46 5666644433   235667788876654321  111 11111          


Q ss_pred             -----HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEE
Q 017793          249 -----IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       249 -----~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~  285 (366)
                           +.+.....+|+++.++.|-..+...+..++.+-++.+
T Consensus        79 ~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          79 AGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             ESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             cCccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence                 1111134688888888777777888888887776554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.11  E-value=0.017  Score=44.01  Aligned_cols=92  Identities=12%  Similarity=0.037  Sum_probs=51.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  265 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  265 (366)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+.....+.+..........+..+.   +     ..+|++|-++.
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~D~iii~vk   72 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDF---L-----ATSDLLLVTLK   72 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHH---H-----HTCSEEEECSC
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccchhhh---h-----cccceEEEeec
Confidence            68999999999877666666788 677777776543322222221100000000111111   1     36999999998


Q ss_pred             ChHH---HHHHHHhhcCCceEEEE
Q 017793          266 FDKT---MSTALNATRPGGKVCLI  286 (366)
Q Consensus       266 ~~~~---~~~~~~~l~~~G~~v~~  286 (366)
                      ....   .+.+...+.++..++.+
T Consensus        73 a~~~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          73 AWQVSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             GGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred             ccchHHHHHhhccccCcccEEeec
Confidence            7533   23333445566666665

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.11  E-value=0.27  Score=40.82  Aligned_cols=103  Identities=21%  Similarity=0.273  Sum_probs=53.9

Q ss_pred             EEEEC-CCHHHHHHHHHHHHCCCCeEEE--EcCChhH----HHHHHHcCCc--eeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          187 VMIMG-SGPIGLVTLLAARAFGAPRIII--TDVDVQR----LSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       187 vlI~G-~g~vG~~ai~la~~~g~~~vv~--v~~~~~~----~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      |||.| ++++|.+.+..+...|++.+.+  +.++.++    .+.++++...  .+..+..+-.+..+.-+.......+.+
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            46678 6899999888887789853322  2333332    2334444321  121111121222221111222234679


Q ss_pred             cEEEEcCCCh----------H---------------HHHHHHHhh--cCCceEEEEccc
Q 017793          258 DVSFDCVGFD----------K---------------TMSTALNAT--RPGGKVCLIGLA  289 (366)
Q Consensus       258 d~vld~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~  289 (366)
                      |+++++.|..          +               ..+..+..|  ..+|+++.++..
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~  143 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV  143 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence            9999988653          1               233444555  456899888643

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.08  E-value=0.025  Score=44.07  Aligned_cols=35  Identities=17%  Similarity=0.345  Sum_probs=29.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      +.+|+|+|+|+.|+.++..++..|++.|.+++.++
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            57899999999999999999999985576776654

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.07  E-value=0.062  Score=45.52  Aligned_cols=98  Identities=19%  Similarity=0.268  Sum_probs=65.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC---------ceeeecCCCCcchHHHHHHHHHh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA---------DETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~---------~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      +...+|||+|.|. |..+-.+++.....+|.+++.+++-.+.++++-.         +.+-.+   ..|..+.+++    
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~---~~Da~~~l~~----  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV---IDDARAYLER----  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE---ESCHHHHHHH----
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEE---EchHHHHhhh----
Confidence            4568999998765 6677778887666689999999998888776421         111111   1344444433    


Q ss_pred             hCCCCcEEE-Ec---CC---------ChHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSF-DC---VG---------FDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vl-d~---~g---------~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+..+|+|| |.   .+         +.+.+..+.++|+++|.++.-.
T Consensus       148 ~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence            367899996 33   12         1246778889999999987643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.07  E-value=0.054  Score=42.13  Aligned_cols=40  Identities=15%  Similarity=0.328  Sum_probs=32.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      =.+|.|+|+|-+|...++++...|. .|+..+.+++..+.+
T Consensus         4 I~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           4 VKQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             CSSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            3679999999999887777777899 688999998765544

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.02  E-value=0.35  Score=36.71  Aligned_cols=100  Identities=18%  Similarity=0.134  Sum_probs=61.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHCC-CCeEEEE-cCCh-hHHHHHHHcCCceeeecCCCCcch-------HHHHHHHHHhhCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFG-APRIIIT-DVDV-QRLSIARNLGADETAKVSTDIEDV-------DTDVGKIQNAMGS  255 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g-~~~vv~v-~~~~-~~~~~~~~lg~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  255 (366)
                      +|.|.|-|-+|....+.+...+ . .++++ +.++ ....++..++.+...........+       .....++    ..
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~----~~   77 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM----LD   77 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH----HH
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHh----hc
Confidence            6889999999999888876554 4 34444 4332 344566666655432211100000       0011111    13


Q ss_pred             CCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       256 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      ++|+|+||.|.-.....+-.++..+-+.+..+.+.
T Consensus        78 ~vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          78 EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             CCCEEEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            69999999998766677778888888888776544

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.98  E-value=0.42  Score=35.72  Aligned_cols=90  Identities=16%  Similarity=0.146  Sum_probs=60.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      .+|.++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.+.....       +..    +.    ....|+++-|+
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-------~~~----e~----~~~~diii~~v   65 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAAR-------SAR----DA----VQGADVVISML   65 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECS-------SHH----HH----HTSCSEEEECC
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccc-------hhh----hh----ccccCeeeecc
Confidence            368899999999876666666788 788999999999988888764321       111    12    24578888888


Q ss_pred             CChHHHHHH-------HHhhcCCceEEEEcccC
Q 017793          265 GFDKTMSTA-------LNATRPGGKVCLIGLAK  290 (366)
Q Consensus       265 g~~~~~~~~-------~~~l~~~G~~v~~g~~~  290 (366)
                      .........       ...+.++-.++..+...
T Consensus        66 ~~~~~~~~v~~~~~~~~~~l~~g~iiid~st~~   98 (162)
T d3cuma2          66 PASQHVEGLYLDDDGLLAHIAPGTLVLECSTIA   98 (162)
T ss_dssp             SCHHHHHHHHHSTTCHHHHSCTTCEEEECSCCC
T ss_pred             cchhhHHHHHhccccccccCCCCCEEEECCCCC
Confidence            876554443       33456666666665443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.94  E-value=0.076  Score=43.27  Aligned_cols=80  Identities=18%  Similarity=0.287  Sum_probs=47.9

Q ss_pred             CEEEEEC-CCHHHHHHHHHH-H--HCCCCeEEEEcCChhHHHHHHHc---CCce-e--eecCCCCcchHHHHHHHHHh-h
Q 017793          185 TNVMIMG-SGPIGLVTLLAA-R--AFGAPRIIITDVDVQRLSIARNL---GADE-T--AKVSTDIEDVDTDVGKIQNA-M  253 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la-~--~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~-~  253 (366)
                      .+|||.| ++++|.+.++.+ +  ..|+ .|+.+.+++++.+.++++   +... .  .|+ ++.++..+...++... .
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-s~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDL-RNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCT-TCGGGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEe-ccHHHHHHHHhhhHHHhh
Confidence            4799998 589999866544 3  3477 677787888766544432   2221 1  222 2334444444444321 2


Q ss_pred             CCCCcEEEEcCCC
Q 017793          254 GSGIDVSFDCVGF  266 (366)
Q Consensus       254 ~~~~d~vld~~g~  266 (366)
                      .+.+|+++++.|.
T Consensus        81 ~~~iDiLvnNAg~   93 (248)
T d1snya_          81 DQGLNVLFNNAGI   93 (248)
T ss_dssp             GGCCSEEEECCCC
T ss_pred             cCCcceEEeeccc
Confidence            4579999998874

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.87  E-value=0.17  Score=38.83  Aligned_cols=100  Identities=16%  Similarity=0.030  Sum_probs=58.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEE-cCCh-hHHHHHHHcCCceeeecC------CCCcchHHHHHHHHHhhCCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIIT-DVDV-QRLSIARNLGADETAKVS------TDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v-~~~~-~~~~~~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +|.|.|.|-+|....+.+... .. .++++ +.++ .....+...+........      ...-.....+.+..    .+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~----~~   77 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI----KT   77 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH----HH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh----hc
Confidence            688999999999999888865 45 45554 4433 333444444432211100      00000000111111    25


Q ss_pred             CcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       257 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +|+|+||.|.....+.+-.++..+-+++..+...
T Consensus        78 vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          78 SDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             CCEEEECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            8999999998766777777888777877765443

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.095  Score=43.67  Aligned_cols=99  Identities=14%  Similarity=0.170  Sum_probs=65.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....++|||+|.|. |..+-.+++..+..++.+++-+++-.+.++++-.        +.+..+.   .|..+.++    .
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~---~Da~~~l~----~  147 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEFMK----Q  147 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHH----T
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE---ccHHHHHh----c
Confidence            45568999998765 5667778887777799999999998888877531        1111111   23333332    2


Q ss_pred             hCCCCcEEEE-cCCC---------hHHHHHHHHhhcCCceEEEEc
Q 017793          253 MGSGIDVSFD-CVGF---------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       253 ~~~~~d~vld-~~g~---------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ....+|+|+- ....         .+.++.+.+.|+++|.++.-.
T Consensus       148 ~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         148 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            3568999963 3221         135677888999999988754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.58  E-value=0.056  Score=38.12  Aligned_cols=38  Identities=29%  Similarity=0.542  Sum_probs=32.0

Q ss_pred             CCC-CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017793          182 GPE-TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR  220 (366)
Q Consensus       182 ~~~-~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~  220 (366)
                      .++ .+|.|+|+|.+|.+.++-|+.+|. ++++.+.+++.
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~   46 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA   46 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence            344 569999999999999999999999 78888776653

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=93.51  E-value=0.056  Score=43.32  Aligned_cols=94  Identities=17%  Similarity=0.097  Sum_probs=59.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ..++.+||=+|||. |..+..+++ .|. .|++++.+++..+.+++...+.+.....+..++       .  ....||+|
T Consensus        18 ~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~-------~--~~~~fD~I   85 (225)
T d2p7ia1          18 FFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-------Q--LPRRYDNI   85 (225)
T ss_dssp             GCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-------C--CSSCEEEE
T ss_pred             hCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhccccccccccccccccc-------c--cccccccc
Confidence            34577899999877 777777765 476 699999999999988875433221111211111       0  14579999


Q ss_pred             EEcC-----CCh-HHHHHHH-HhhcCCceEEEE
Q 017793          261 FDCV-----GFD-KTMSTAL-NATRPGGKVCLI  286 (366)
Q Consensus       261 ld~~-----g~~-~~~~~~~-~~l~~~G~~v~~  286 (366)
                      +..-     ..+ ..+..+. ++|+++|.++..
T Consensus        86 ~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          86 VLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            7532     222 2344555 578999998764

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.45  E-value=0.07  Score=42.63  Aligned_cols=98  Identities=14%  Similarity=0.132  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC----ceeeecCCCCcchHHHHHHHHHhhCC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ..+++.+||-+|||. |..+..+++..+. .|.+++.+++-.+.+++.-.    ..+--...+..++       . ....
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~-------~-~~~~  126 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF-------T-PEPD  126 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC-------C-CCSS
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccccccccc-------c-cccc
Confidence            456778999999887 7788887765554 89999999998888876432    1211111111111       0 1145


Q ss_pred             CCcEEEEc-----CCCh---HHHHHHHHhhcCCceEEEEc
Q 017793          256 GIDVSFDC-----VGFD---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       256 ~~d~vld~-----~g~~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+|+|+..     +..+   ..+..+.+.|+++|.++...
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            78999773     2322   36777888999999998764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.44  E-value=0.21  Score=39.04  Aligned_cols=86  Identities=20%  Similarity=0.194  Sum_probs=55.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|...+++++..|+ .|++.+...+....  ..+.    ..    .++.+.+        ...|++.-
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~~~~----~~----~~l~~~l--------~~sDii~~  102 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELE--KKGY----YV----DSLDDLY--------KQADVISL  102 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--HTTC----BC----SCHHHHH--------HHCSEEEE
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccc--ccee----ee----ccccccc--------cccccccc
Confidence            37899999999999999999999999 78888765543322  1121    11    1222222        23788877


Q ss_pred             cCCC-hHH----HHHHHHhhcCCceEEEEc
Q 017793          263 CVGF-DKT----MSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~-~~~----~~~~~~~l~~~G~~v~~g  287 (366)
                      ++.- +.+    -...++.|+++..++-++
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1         103 HVPDVPANVHMINDESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             CSCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred             cCCccccccccccHHHHhhhCCccEEEecC
Confidence            6643 211    134567888887776654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.43  E-value=0.43  Score=36.41  Aligned_cols=131  Identities=12%  Similarity=0.078  Sum_probs=76.7

Q ss_pred             EEEEECCCHHHHH-HHHHHHHCC--CCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          186 NVMIMGSGPIGLV-TLLAARAFG--APRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       186 ~vlI~G~g~vG~~-ai~la~~~g--~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      ++.|+|+|.+|.- .+...+..+  ++.+.++++++++.+ +.++++...+.      .++.+    +.+  ...+|+|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~e----ll~--~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEE----LLE--SGLVDAVD   72 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHH----HHH--SSCCSEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeec----ccc--ccccceee
Confidence            6889999999964 456666543  333335567776655 45667765432      13333    222  45799999


Q ss_pred             EcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech---Hhh-hcCcEEEEeecc-----CCChHHHHHHHHCCCC
Q 017793          262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---PAA-AREVDVIGIFRY-----RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~-~~~~~~~~~~~~-----~~~~~~~~~~l~~g~~  329 (366)
                      -|+....+...+..++..+ +=+++.-+.........   ... ..+..+.-....     .+.+..+.+++++|++
T Consensus        73 I~tp~~~h~~~~~~al~~g-k~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRKG-VHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHTT-CEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             ccccccccccccccccccc-hhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            9999887888888888776 44555433222111111   122 233333322222     2457788899999988

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=93.42  E-value=0.11  Score=42.39  Aligned_cols=97  Identities=21%  Similarity=0.217  Sum_probs=61.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHHhhCC
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ++++++||=+|||. |..+..+++. |...|+++|.+++..+.+++    .+.. .+.-...+.....     +  ....
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~-----~--~~~~   92 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH-----M--DLGK   92 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC-----C--CCSS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhc-----c--cccc
Confidence            67899999999876 6667777775 55579999999998887764    3322 2211111100000     0  0145


Q ss_pred             CCcEEEEcCCC------h----HHHHHHHHhhcCCceEEEE
Q 017793          256 GIDVSFDCVGF------D----KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       256 ~~d~vld~~g~------~----~~~~~~~~~l~~~G~~v~~  286 (366)
                      .||+|+....-      .    ..+..+.++|++||.++..
T Consensus        93 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          93 EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            69999764322      1    2455677889999998763

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.35  E-value=0.096  Score=43.46  Aligned_cols=96  Identities=14%  Similarity=0.185  Sum_probs=62.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------------ceeeecCCCCcchHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------------DETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------------~~~~~~~~~~~~~~~~~~  247 (366)
                      ....+|||+|+|. |..+-.+++. +..+|.+++-+++-.+.++++-.              +.+..+.   .|....++
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~---~Da~~~l~  145 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---GDGFEFIK  145 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---SCHHHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE---ChHHHHHh
Confidence            5568999998665 4455566664 55589999999998888876431              1111111   23333333


Q ss_pred             HHHHhhCCCCcEEEE-cCCC---------hHHHHHHHHhhcCCceEEEEc
Q 017793          248 KIQNAMGSGIDVSFD-CVGF---------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       248 ~~~~~~~~~~d~vld-~~g~---------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +     .+++|+||- +...         .+.+..+.++|+++|.++.-.
T Consensus       146 ~-----~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         146 N-----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             H-----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c-----cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            2     467999964 3321         246778889999999988754

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.34  E-value=0.28  Score=39.69  Aligned_cols=33  Identities=21%  Similarity=0.399  Sum_probs=29.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      ..+|+|+|+|++|..++..+.+.|..++..+|.
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence            468999999999999999999999998999863

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=93.24  E-value=0.33  Score=36.67  Aligned_cols=100  Identities=18%  Similarity=0.234  Sum_probs=63.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCc--------------------eeeecCCCCcchH
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIARNLGAD--------------------ETAKVSTDIEDVD  243 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~--~~~~~~~~~~lg~~--------------------~~~~~~~~~~~~~  243 (366)
                      +|.|.|-|-+|.++...+...+.+.+...+.  +.+...++-++...                    .+..++...+   
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p---   78 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP---   78 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG---
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh---
Confidence            6889999999999999888778854444443  34666666554221                    0011111111   


Q ss_pred             HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC
Q 017793          244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE  292 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  292 (366)
                      +.+.+-    ..++|+|+||.|.-...+.+..++..+.+-+++..+..+
T Consensus        79 ~~i~W~----~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~d  123 (169)
T d1dssg1          79 ENIPWS----KAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSAD  123 (169)
T ss_dssp             GGCCHH----HHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSS
T ss_pred             HHCCcc----ccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCccc
Confidence            111111    247999999999866677888889888877777655443

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=93.22  E-value=0.17  Score=41.24  Aligned_cols=102  Identities=14%  Similarity=0.019  Sum_probs=66.6

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-Cceeeec-CCCCcchHHHHHHHHHhh
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADETAKV-STDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~-~~~~~~~~~~~~~~~~~~  253 (366)
                      ++....+++.+||=+|||. |..+.+++...+. .|.+++.+++-.+.+++.- ....+.+ ..+..++.        ..
T Consensus        86 l~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~--------~~  155 (254)
T d1xtpa_          86 IASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT--------LP  155 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC--------CC
T ss_pred             HhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEccccccc--------cC
Confidence            3455566788999999887 8888888876554 7999999999888887642 2122222 11111110        01


Q ss_pred             CCCCcEEEEcCCC-----h---HHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGF-----D---KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~-----~---~~~~~~~~~l~~~G~~v~~g  287 (366)
                      .+.||+|+..-.-     +   ..+..+.+.|+++|.++...
T Consensus       156 ~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            4579999764321     1   34677888899999988753

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=93.04  E-value=0.032  Score=46.66  Aligned_cols=98  Identities=15%  Similarity=0.236  Sum_probs=65.8

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .++.++.+||=+|||. |..+..+++..+. ..|+++|.+++..+.+++.    +.+.-+. ..+..++         ..
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~-~~d~~~~---------~~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFL-EGDATEI---------EL   91 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEE-ESCTTTC---------CC
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccc-ccccccc---------cc
Confidence            3567889999999985 8899999987642 3799999999887777653    3321111 1111111         01


Q ss_pred             CCCCcEEEEcC-----CC-hHHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...+|+|+..-     .. ...+..+.+.|+|||.++...
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            35699998643     22 246788899999999988754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.96  E-value=0.063  Score=43.78  Aligned_cols=35  Identities=17%  Similarity=0.296  Sum_probs=29.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ..++|+|+|+|+.|+++...++..|. .|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            45899999999999998888888899 788887643

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.88  E-value=0.34  Score=36.16  Aligned_cols=99  Identities=22%  Similarity=0.190  Sum_probs=69.2

Q ss_pred             HHHHHHh--CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793          172 GVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       172 a~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      .+.++.+  .-.-.|.+++|.|=|-+|.-..+-++.+|+ +|++++.++-+.-.+.--|.. +.       .    +.+.
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~-------~----~~~a   75 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-------T----LDEI   75 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-------C----HHHH
T ss_pred             HHHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cC-------c----hhHc
Confidence            3445533  345689999999999999999999999999 899999988664333222332 21       1    1122


Q ss_pred             HHhhCCCCcEEEEcCCChHH-HHHHHHhhcCCceEEEEc
Q 017793          250 QNAMGSGIDVSFDCVGFDKT-MSTALNATRPGGKVCLIG  287 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~~-~~~~~~~l~~~G~~v~~g  287 (366)
                          -...|+++-+.|.... -...++.|+++..+.-.|
T Consensus        76 ----~~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~G  110 (163)
T d1v8ba1          76 ----VDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIG  110 (163)
T ss_dssp             ----TTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECS
T ss_pred             ----cccCcEEEEcCCCCccccHHHHHHhhCCeEEEecc
Confidence                3568999999998753 345668888888766555

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.85  E-value=0.32  Score=39.22  Aligned_cols=47  Identities=23%  Similarity=0.289  Sum_probs=37.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCc
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD  230 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~  230 (366)
                      +|.++||.| ++++|.+.++-+...|+ +|+.+++++++.+ .+++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            588899998 68999998888888999 6888877776554 55667654

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.31  Score=38.63  Aligned_cols=103  Identities=18%  Similarity=0.262  Sum_probs=67.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh-C
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM-G  254 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~-~  254 (366)
                      .....+||-+|++. |..++.+|+.+. -.++++++.+++..+.+++    .|....+...  ..+..+.+.++.... .
T Consensus        57 ~~~~k~vLEiGt~~-GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~--~Gda~e~l~~~~~~~~~  133 (219)
T d2avda1          57 LIQAKKALDLGTFT-GYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLR--LKPALETLDELLAAGEA  133 (219)
T ss_dssp             HTTCCEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHHTTCT
T ss_pred             ccCCCeEEEEechh-hHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEE--Eeehhhcchhhhhhccc
Confidence            34568999999765 778888888763 2389999999998776654    4544322221  134445555444322 4


Q ss_pred             CCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..||.||--..-.   ..++.+++.|++||.++.=
T Consensus       134 ~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         134 GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             TCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence            5699997544332   3577889999999988764

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.68  E-value=0.21  Score=39.69  Aligned_cols=92  Identities=15%  Similarity=0.149  Sum_probs=58.9

Q ss_pred             CEEEEECCCHHHH-HHHHHHHH-CCCCeEEEEcCChhHHH-HHHHcCCce--eeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          185 TNVMIMGSGPIGL-VTLLAARA-FGAPRIIITDVDVQRLS-IARNLGADE--TAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       185 ~~vlI~G~g~vG~-~ai~la~~-~g~~~vv~v~~~~~~~~-~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      =+|.|+|+|.+|. ..+...+. -+++.+.++++++++.+ ++++++.+.  +..+    .++.+.+    .  ...+|+
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~----~d~~ell----~--~~~iD~  103 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDY----SNFDKIA----K--DPKIDA  103 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECS----SSGGGGG----G--CTTCCE
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccccccccc----Cchhhhc----c--ccccee
Confidence            3688899999885 34444343 36744556677777654 667777642  2222    1232222    1  457999


Q ss_pred             EEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793          260 SFDCVGFDKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      |+-++....+...+..+|..+= =+++.
T Consensus       104 V~I~tp~~~H~~~~~~al~~gk-~v~~E  130 (221)
T d1h6da1         104 VYIILPNSLHAEFAIRAFKAGK-HVMCE  130 (221)
T ss_dssp             EEECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred             eeeccchhhhhhHHHHhhhcch-hhhcC
Confidence            9999998888888988887764 44454

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.64  E-value=1.2  Score=36.52  Aligned_cols=113  Identities=15%  Similarity=0.161  Sum_probs=70.9

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceeeecCC---------------
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVST---------------  237 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~~---------------  237 (366)
                      +.+...++++..|....+|..|+++...|+.+|.+-+|.+.  .++.+.+.++.+|+..++....               
T Consensus        51 a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~  130 (292)
T d2bhsa1          51 AEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMAN  130 (292)
T ss_dssp             HHHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred             HHHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccc
Confidence            34556667777666667899999999999999995555553  3567888999999975432110               


Q ss_pred             -----------CCcchHH----HHHHHHHhhCCCCcEEEEcCCChHHHHHHH---HhhcCCceEEEEc
Q 017793          238 -----------DIEDVDT----DVGKIQNAMGSGIDVSFDCVGFDKTMSTAL---NATRPGGKVCLIG  287 (366)
Q Consensus       238 -----------~~~~~~~----~~~~~~~~~~~~~d~vld~~g~~~~~~~~~---~~l~~~G~~v~~g  287 (366)
                                 +..++..    .-.++.++.+..+|+++.++|+..++.-..   +.+.+..+++.+.
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                       0000111    112233334556999999998876555443   4456677776654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.64  E-value=0.061  Score=35.10  Aligned_cols=35  Identities=20%  Similarity=0.418  Sum_probs=29.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR  220 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~  220 (366)
                      .+|.|+|+|.+|.+.++-++.+|. ++++.+.+++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence            378999999999999999999999 68888765543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.28  E-value=0.19  Score=39.88  Aligned_cols=73  Identities=21%  Similarity=0.136  Sum_probs=44.2

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+|||.| +|.+|...+..+...|.+ .++...+++++.+.+.. +...+ .  .+..+.. .+.+..    .++|.|+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~-~--~d~~~~~-~~~~~~----~~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVF-I--GDITDAD-SINPAF----QGIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEE-E--CCTTSHH-HHHHHH----TTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEE-E--eeecccc-cccccc----ccceeeEE
Confidence            5899998 699999999998888864 35556677766544321 22221 1  1112222 222222    46899999


Q ss_pred             cCCC
Q 017793          263 CVGF  266 (366)
Q Consensus       263 ~~g~  266 (366)
                      +.+.
T Consensus        75 ~a~~   78 (252)
T d2q46a1          75 LTSA   78 (252)
T ss_dssp             CCCC
T ss_pred             EEee
Confidence            8753

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.27  E-value=0.35  Score=37.34  Aligned_cols=89  Identities=17%  Similarity=0.130  Sum_probs=56.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.++.|+|.|.+|...+++++..|. .|++.++........++.+....       .+    +.++    -...|+|.-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~----l~~~----l~~sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------AT----REDM----YPVCDVVTL  106 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SS----HHHH----GGGCSEEEE
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc-------CC----HHHH----HHhccchhh
Confidence            47899999999999999999999999 78888776554444444443221       11    1122    134777766


Q ss_pred             cCCChH-----HHHHHHHhhcCCceEEEEc
Q 017793          263 CVGFDK-----TMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~~~-----~~~~~~~~l~~~G~~v~~g  287 (366)
                      +..-..     .-...++.|+++..++-++
T Consensus       107 ~~plt~~T~~li~~~~l~~mk~ga~lIN~a  136 (188)
T d2naca1         107 NCPLHPETEHMINDETLKLFKRGAYIVNTA  136 (188)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             cccccccchhhhHHHHHHhCCCCCEEEecC
Confidence            554321     1124556777777665554

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.26  E-value=1.4  Score=35.56  Aligned_cols=40  Identities=15%  Similarity=0.163  Sum_probs=31.4

Q ss_pred             HHHHhCCC-CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEE
Q 017793          174 HACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT  214 (366)
Q Consensus       174 ~~l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v  214 (366)
                      .+++..+. -.|.+|+|.|.|.+|..+++++...|+ +|+++
T Consensus        25 ~~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvav   65 (255)
T d1bgva1          25 AVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTL   65 (255)
T ss_dssp             HHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEE
T ss_pred             HHHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEE
Confidence            34444332 367899999999999999999999999 66665

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.22  E-value=0.29  Score=39.76  Aligned_cols=34  Identities=18%  Similarity=0.272  Sum_probs=26.9

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR  220 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~  220 (366)
                      +.||.| ++++|.+.++.+...|+ .|+.++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            467888 68999999888888999 67777766543

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.15  E-value=0.48  Score=39.16  Aligned_cols=100  Identities=18%  Similarity=0.246  Sum_probs=59.9

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      ...++|++||=..|++=| =+.+++....-..+++++.++.|...+    +.+|...+.....+ .....    .  ...
T Consensus        98 L~~~~g~~vLD~CAaPGg-Kt~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~-~~~~~----~--~~~  169 (284)
T d1sqga2          98 LAPQNGEHILDLCAAPGG-KTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG-RYPSQ----W--CGE  169 (284)
T ss_dssp             HCCCTTCEEEEESCTTCH-HHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT-TCTHH----H--HTT
T ss_pred             cCccccceeEeccCcccc-chhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc-cccch----h--ccc
Confidence            457899999987544422 233444444334799999999987655    45787644332221 11111    1  124


Q ss_pred             CCCcEEE-E--cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          255 SGIDVSF-D--CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       255 ~~~d~vl-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      ..||.|| |  |+|..                         ..+..+++.|++||+++..
T Consensus       170 ~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs  229 (284)
T d1sqga2         170 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  229 (284)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            5798885 4  66554                         2555677778888887753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.07  E-value=0.47  Score=36.84  Aligned_cols=73  Identities=18%  Similarity=0.228  Sum_probs=48.8

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCC
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      ...++ .|.+||=.|||. |..++.+++ .|+..|++++.+++..+.+++.-.. .++.     .++.    +    ..+
T Consensus        43 ~~~dl-~Gk~VLDlGcGt-G~l~i~a~~-~ga~~V~~vDid~~a~~~ar~N~~~~~~~~-----~D~~----~----l~~  106 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAGTGN-GILACGSYL-LGAESVTAFDIDPDAIETAKRNCGGVNFMV-----ADVS----E----ISG  106 (197)
T ss_dssp             HHTSS-BTSEEEEETCTT-CHHHHHHHH-TTBSEEEEEESCHHHHHHHHHHCTTSEEEE-----CCGG----G----CCC
T ss_pred             HcCCC-CCCEEEEeCCCC-cHHHHHHHH-cCCCcccccccCHHHHHHHHHccccccEEE-----Eehh----h----cCC
Confidence            44565 589999998765 666655444 6877899999999999988875432 2221     1221    1    156


Q ss_pred             CCcEEEEcCC
Q 017793          256 GIDVSFDCVG  265 (366)
Q Consensus       256 ~~d~vld~~g  265 (366)
                      .||+|+-..+
T Consensus       107 ~fD~Vi~NPP  116 (197)
T d1ne2a_         107 KYDTWIMNPP  116 (197)
T ss_dssp             CEEEEEECCC
T ss_pred             cceEEEeCcc
Confidence            7999997654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.06  E-value=0.11  Score=39.95  Aligned_cols=37  Identities=27%  Similarity=0.487  Sum_probs=31.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ...+.+|+|+|+|+.|+.|...+...|. .|...+..+
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            3456899999999999999999999998 788887654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=92.01  E-value=0.32  Score=39.61  Aligned_cols=84  Identities=23%  Similarity=0.379  Sum_probs=50.1

Q ss_pred             CCCCEEEEEC-CC--HHHHHHHHHHHHCCCCeEEEEcCChhHH-H-HHHHcCCcee-eec-CCCCcchHHHHHHHHHh--
Q 017793          182 GPETNVMIMG-SG--PIGLVTLLAARAFGAPRIIITDVDVQRL-S-IARNLGADET-AKV-STDIEDVDTDVGKIQNA--  252 (366)
Q Consensus       182 ~~~~~vlI~G-~g--~vG~~ai~la~~~g~~~vv~v~~~~~~~-~-~~~~lg~~~~-~~~-~~~~~~~~~~~~~~~~~--  252 (366)
                      =+|.++||.| +|  ++|.+..+-+...|+ .|+.+.+++++. + ..++++.... +.. ..+..+..+..+.+.+.  
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            3578999998 34  599988887778899 677777766654 3 3344554321 111 12223333333333322  


Q ss_pred             hCCCCcEEEEcCCC
Q 017793          253 MGSGIDVSFDCVGF  266 (366)
Q Consensus       253 ~~~~~d~vld~~g~  266 (366)
                      ..+.+|+++.+.|.
T Consensus        83 ~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          83 AGNKLDGVVHSIGF   96 (268)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             cCCCcceeeecccc
Confidence            23568999998873

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.92  E-value=2.7  Score=34.43  Aligned_cols=105  Identities=18%  Similarity=0.215  Sum_probs=66.6

Q ss_pred             HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceeeecC--------------
Q 017793          173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVS--------------  236 (366)
Q Consensus       173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~--------------  236 (366)
                      ..+++....+++..+...++|..|.++...++.+|.+.++++.  .++.+...++.+|++.+....              
T Consensus        50 ~~a~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~  129 (302)
T d1fcja_          50 WDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEI  129 (302)
T ss_dssp             HHHHHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHH
Confidence            3445666777787766667899999999999999986555553  455677788888886542110              


Q ss_pred             -----------CCCcch-------HHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhh
Q 017793          237 -----------TDIEDV-------DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT  277 (366)
Q Consensus       237 -----------~~~~~~-------~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l  277 (366)
                                 ....+.       ...-.++.+..+..+|+++-++|+..++.-....+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~l  188 (302)
T d1fcja_         130 VASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYI  188 (302)
T ss_dssp             HHTSTTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHH
T ss_pred             HhhhccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeee
Confidence                       000111       11112344444567899999999876665555544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.76  E-value=0.43  Score=32.26  Aligned_cols=72  Identities=15%  Similarity=0.080  Sum_probs=48.6

Q ss_pred             CCCCCEEEEECCCHHHHHH-HHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          181 VGPETNVMIMGSGPIGLVT-LLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~a-i~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+...++.++|-|++|+.+ +++++..|. .|.+.|... ...+.+++.|......+..  .+            -.++|
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~~------------i~~~d   69 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE--EH------------IEGAS   69 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG--GG------------GTTCS
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc--cc------------CCCCC
Confidence            3456789999987778777 788999999 788888753 4556667788764433211  11            13578


Q ss_pred             EEEEcCCCh
Q 017793          259 VSFDCVGFD  267 (366)
Q Consensus       259 ~vld~~g~~  267 (366)
                      +|+-+.+-+
T Consensus        70 ~vV~S~AI~   78 (96)
T d1p3da1          70 VVVVSSAIK   78 (96)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCcC
Confidence            887766543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=91.68  E-value=1.6  Score=31.71  Aligned_cols=38  Identities=26%  Similarity=0.543  Sum_probs=30.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHH
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLS  222 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~  222 (366)
                      .+|.|+|+|.+|..+...+...+. +.++.++.++++.+
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~   40 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVE   40 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccch
Confidence            578999999999998877777774 57999998887653

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.53  E-value=1  Score=34.97  Aligned_cols=95  Identities=18%  Similarity=0.107  Sum_probs=63.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      ..+|=+|||. |..++.+|+...-..+++++.++.....+    ++.+...+..+..+..++...   +   ....+|.|
T Consensus        33 plvLdIGcG~-G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~---~---~~~~~~~i  105 (204)
T d1yzha1          33 PIHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY---F---EDGEIDRL  105 (204)
T ss_dssp             CEEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT---S---CTTCCSEE
T ss_pred             CeEEEEeccC-CHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhh---c---cCCceehh
Confidence            3455579887 89999999987544899999998765544    456665443333333333221   1   14568888


Q ss_pred             EEcCCC--------------hHHHHHHHHhhcCCceEEEE
Q 017793          261 FDCVGF--------------DKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       261 ld~~g~--------------~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +-....              +..++.+.+.|++||.+...
T Consensus       106 ~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~  145 (204)
T d1yzha1         106 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  145 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             cccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            766553              35788889999999998764

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=91.51  E-value=0.22  Score=38.85  Aligned_cols=89  Identities=17%  Similarity=0.165  Sum_probs=58.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +.++.+||=+|||. |..+..++      .+++++.+++-.+.+++-+......   +..++.        ...+.||+|
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~~------~~~giD~s~~~~~~a~~~~~~~~~~---d~~~l~--------~~~~~fD~I   95 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPLK------IKIGVEPSERMAEIARKRGVFVLKG---TAENLP--------LKDESFDFA   95 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHHT------CCEEEESCHHHHHHHHHTTCEEEEC---BTTBCC--------SCTTCEEEE
T ss_pred             hCCCCeEEEECCCC-cccccccc------eEEEEeCChhhcccccccccccccc---cccccc--------ccccccccc
Confidence            45677899999874 65555542      4689999999999998866543221   111211        014569999


Q ss_pred             EEcC-----CC-hHHHHHHHHhhcCCceEEEEc
Q 017793          261 FDCV-----GF-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       261 ld~~-----g~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +..-     .. ...++...+.|+++|.++...
T Consensus        96 ~~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~  128 (208)
T d1vlma_          96 LMVTTICFVDDPERALKEAYRILKKGGYLIVGI  128 (208)
T ss_dssp             EEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhcCCCCceEEEEe
Confidence            7643     22 246778899999999988764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.50  E-value=0.23  Score=39.67  Aligned_cols=48  Identities=27%  Similarity=0.317  Sum_probs=39.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGAD  230 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~  230 (366)
                      -.|.+|+|.|.|.+|..+++++...|+ ++++++.+..+.+.+. +.|+.
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            368999999999999999999999999 7888888887766444 35543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.49  E-value=1.1  Score=32.76  Aligned_cols=74  Identities=23%  Similarity=0.246  Sum_probs=45.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcC-CceeeecC--CCCcchHHHHHHHHHhhCCCCcE
Q 017793          185 TNVMIMGS-GPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLG-ADETAKVS--TDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       185 ~~vlI~G~-g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+|.|.|| |.+|.....++...+. +.++.++.++.+.+.+ .+. ++......  ....+..+.        -.+.|+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~~~~~~~~~~~~~~~~~~~~~--------~~~aDi   71 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLSHIETRATVKGYLGPEQLPDC--------LKGCDV   71 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHTTSSSSCEEEEEESGGGHHHH--------HTTCSE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHhhhhhhcCCCeEEcCCChHHH--------hCCCCE
Confidence            37899995 9999999998888875 7788898877654433 332 21111100  011122221        157999


Q ss_pred             EEEcCCCh
Q 017793          260 SFDCVGFD  267 (366)
Q Consensus       260 vld~~g~~  267 (366)
                      |+-+.|.+
T Consensus        72 vVitag~~   79 (144)
T d1mlda1          72 VVIPAGVP   79 (144)
T ss_dssp             EEECCSCC
T ss_pred             EEECCCcC
Confidence            99998853

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.48  E-value=0.099  Score=43.33  Aligned_cols=34  Identities=18%  Similarity=0.403  Sum_probs=29.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      +.+|+|+|+|..|++|...++..|. .|.+++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            4689999999999999888888999 788887643

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.48  E-value=0.32  Score=34.30  Aligned_cols=42  Identities=14%  Similarity=0.166  Sum_probs=33.6

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ++.....++.+++|.|+|.+|.=..+.++..|. .+..+...+
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            345566788999999999999988888888898 677775543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.46  E-value=0.69  Score=33.06  Aligned_cols=30  Identities=23%  Similarity=0.263  Sum_probs=24.3

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEc
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITD  215 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~  215 (366)
                      +|.|+| +|-+|++..+++...+.+.+..++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id   32 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD   32 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC
Confidence            689999 599999999999988885555554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.20  E-value=0.17  Score=38.67  Aligned_cols=41  Identities=20%  Similarity=0.277  Sum_probs=31.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      -++.+|||+|+|+++.+++.-+...|  .+.++.++.++.+.+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            36789999999999998876665443  788888888876644

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=91.17  E-value=1.6  Score=32.72  Aligned_cols=96  Identities=10%  Similarity=0.018  Sum_probs=56.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      .+|-|+|.|.+|...+.-+...|. .|++.++++++.+.+.+.++.......   ....+.+.+.    -...|.++-++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~---a~~~~~~~~~----~~~~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKGTKVLG---AHSLEEMVSK----LKKPRRIILLV   74 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTTSSCEE---CSSHHHHHHH----BCSSCEEEECS
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhccccccccc---hhhhhhhhhh----hcccceEEEec
Confidence            468899999999877777767798 688889999998877765543110000   0111111111    24566666666


Q ss_pred             CChHH----HHHHHHhhcCCceEEEEcc
Q 017793          265 GFDKT----MSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       265 g~~~~----~~~~~~~l~~~G~~v~~g~  288 (366)
                      .....    .+.+...+.++-.++..+.
T Consensus        75 ~~~~~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          75 KAGQAVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             CTTHHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             CchHHHHHHHHHHHhccccCcEEEecCc
Confidence            54332    2334445566665555543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.16  E-value=0.55  Score=36.23  Aligned_cols=88  Identities=18%  Similarity=0.086  Sum_probs=54.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      |.++.|+|.|.+|....++++..|. ++++.+............+...   +    .++.+.+        ...|+|.-+
T Consensus        47 g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~----~~l~~ll--------~~sD~v~l~  110 (191)
T d1gdha1          47 NKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H----DSLDSLL--------SVSQFFSLN  110 (191)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C----SSHHHHH--------HHCSEEEEC
T ss_pred             ccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c----CCHHHHH--------hhCCeEEec
Confidence            7899999999999999999999999 7888876554333322322211   1    1222222        236777665


Q ss_pred             CCC-hHH----HHHHHHhhcCCceEEEEc
Q 017793          264 VGF-DKT----MSTALNATRPGGKVCLIG  287 (366)
Q Consensus       264 ~g~-~~~----~~~~~~~l~~~G~~v~~g  287 (366)
                      .+- +++    -...++.|+++..++-++
T Consensus       111 ~plt~~T~~li~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         111 APSTPETRYFFNKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             CCCCchHhheecHHHhhCcCCccEEEecC
Confidence            532 211    124567778877766554

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.07  E-value=0.12  Score=42.23  Aligned_cols=33  Identities=24%  Similarity=0.424  Sum_probs=28.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      +|+|+|+|+.|+++..+++..|...|.+++.++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            699999999999999999999976777776654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.99  E-value=0.28  Score=42.57  Aligned_cols=32  Identities=28%  Similarity=0.379  Sum_probs=26.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      |.+|||.| +|-+|...+..+...|. .|+++|+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDn   33 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDN   33 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEec
Confidence            67999998 69999999888888998 7888863

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.96  E-value=0.13  Score=42.45  Aligned_cols=105  Identities=12%  Similarity=0.089  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHC-----CCC-eEEEEcCChhHHHHHHHcCCc------eeeecCCCCcchHHHHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAF-----GAP-RIIITDVDVQRLSIARNLGAD------ETAKVSTDIEDVDTDVG  247 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~-----g~~-~vv~v~~~~~~~~~~~~lg~~------~~~~~~~~~~~~~~~~~  247 (366)
                      ..++.-+||=+|||. |.++..+++.+     +.. .+++++.+++-.+.+++.-..      ..++...  ..+.....
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~  113 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK--ETSSEYQS  113 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC--SCHHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchh--hhhhhhcc
Confidence            345556899999775 55655555532     221 478999999887777653111      1111111  11211111


Q ss_pred             HHH-HhhCCCCcEEEEcC-----CC-hHHHHHHHHhhcCCceEEEEc
Q 017793          248 KIQ-NAMGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       248 ~~~-~~~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ... ......||+|+..-     .. ...+..+.+.|+|+|.++...
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~  160 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV  160 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEE
Confidence            111 11256799997633     22 357888999999999887764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=90.95  E-value=0.45  Score=40.17  Aligned_cols=76  Identities=28%  Similarity=0.367  Sum_probs=43.0

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC----ChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDV----DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~----~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      +|||.| +|-+|...+..+...|. .|+++++    ........+.+..+.+--+..+-.+.. .+.+..+  ..++|+|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~l~~~~~--~~~~d~V   77 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA-LMTEILH--DHAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHH-HHHHHHH--HTTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHH-HHHHHHh--ccCCCEE
Confidence            699998 69999999888888898 6777753    223333333332222111112222322 2222221  3479999


Q ss_pred             EEcCC
Q 017793          261 FDCVG  265 (366)
Q Consensus       261 ld~~g  265 (366)
                      |.+.+
T Consensus        78 iHlAa   82 (338)
T d1udca_          78 IHFAG   82 (338)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99875

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.94  E-value=0.36  Score=41.69  Aligned_cols=93  Identities=14%  Similarity=0.123  Sum_probs=62.0

Q ss_pred             ECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceee--------ecC----CCCcchHHHHHHHHHhh
Q 017793          190 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETA--------KVS----TDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       190 ~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~--------~~~----~~~~~~~~~~~~~~~~~  253 (366)
                      -+-++.|..++++|+..|+..|++.|.+++..+++++.    +.....        ...    ....+.-..+    ...
T Consensus        51 D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~----~~~  126 (375)
T d2dula1          51 DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM----AER  126 (375)
T ss_dssp             ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH----HHS
T ss_pred             EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhh----Hhh
Confidence            35556688999999999998899999999988888652    221100        000    0011222222    223


Q ss_pred             CCCCcEE-EEcCCCh-HHHHHHHHhhcCCceEEEE
Q 017793          254 GSGIDVS-FDCVGFD-KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       254 ~~~~d~v-ld~~g~~-~~~~~~~~~l~~~G~~v~~  286 (366)
                      +..||+| ||..|++ ..++.+++.++.+|.+...
T Consensus       127 ~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vT  161 (375)
T d2dula1         127 HRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVT  161 (375)
T ss_dssp             TTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEE
Confidence            5679977 8999884 4688899999999987765

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.92  E-value=1.7  Score=32.59  Aligned_cols=95  Identities=18%  Similarity=0.246  Sum_probs=54.0

Q ss_pred             CCCCCCEEEEECC--CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHHh
Q 017793          180 NVGPETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       180 ~~~~~~~vlI~G~--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ++.+|.+||=.+|  |.+|   +..++ .|+ .+++++.+++..+.+++    ++.. .+...     +....+... ..
T Consensus        38 ~~~~g~~vLDl~~G~G~~~---i~a~~-~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~-----~~d~~~~~~-~~  106 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVG---LEAAS-EGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVAL-----PVEVFLPEA-KA  106 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHH---HHHHH-TTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECS-----CHHHHHHHH-HH
T ss_pred             cccCCCeEEEeccccchhh---hhhhh-ccc-hhhhcccCHHHHhhhhHHHHhhccccceeee-----ehhcccccc-cc
Confidence            4677889988764  5544   44333 588 68899999998877653    5543 33221     111111111 12


Q ss_pred             hCCCCcEEEEcC----CChHHHHHHHH--hhcCCceEEE
Q 017793          253 MGSGIDVSFDCV----GFDKTMSTALN--ATRPGGKVCL  285 (366)
Q Consensus       253 ~~~~~d~vld~~----g~~~~~~~~~~--~l~~~G~~v~  285 (366)
                      ....||+||-.-    +-...+.....  .|+++|.++.
T Consensus       107 ~~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         107 QGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             TTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             cCCccceeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            256799997522    22334444433  4788887664

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=90.87  E-value=0.32  Score=40.03  Aligned_cols=37  Identities=11%  Similarity=0.088  Sum_probs=25.7

Q ss_pred             EEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793          187 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI  223 (366)
Q Consensus       187 vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~  223 (366)
                      +||.| ++++|.+.++.+...|++.++...+++++.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~   42 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANA   42 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHH
Confidence            46678 68999998888888999544444555555443

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.87  E-value=0.27  Score=38.11  Aligned_cols=39  Identities=23%  Similarity=0.367  Sum_probs=33.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      .+|.|+|+|.+|....+++...|. .|+..+.+++..+.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999988888888999 799999998765544

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.87  E-value=2  Score=30.83  Aligned_cols=31  Identities=23%  Similarity=0.229  Sum_probs=22.3

Q ss_pred             EEEEEC-CCHHHHHHHHHHHH-CCCCeEEEEcC
Q 017793          186 NVMIMG-SGPIGLVTLLAARA-FGAPRIIITDV  216 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~-~g~~~vv~v~~  216 (366)
                      +|.|.| .|-+|...++.+.. .+.+.+.+++.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~   33 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA   33 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            688999 59999998888765 45644444443

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=90.86  E-value=0.69  Score=34.47  Aligned_cols=128  Identities=12%  Similarity=0.039  Sum_probs=72.9

Q ss_pred             EEEEECCCHHHHH-HHHHHHHC-CCCeEEEEcCChhHH-HHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          186 NVMIMGSGPIGLV-TLLAARAF-GAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       186 ~vlI~G~g~vG~~-ai~la~~~-g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      +|.|+|+|.+|.- .+...+.. +++.+.+.+.++++. +++++++.+.   + +   ++    .++.    ..+|+|+.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~-~---~~----~~l~----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---A-D---SL----SSLA----ASCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---C-S---SH----HHHH----TTCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---c-c---cc----hhhh----hhcccccc
Confidence            6889999998863 56655544 664455556666654 4566777642   1 1   11    2222    35899999


Q ss_pred             cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEeecc---CCChHHHHHHHHCCCC
Q 017793          263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGIFRY---RSTWPLCIEFLRSGKI  329 (366)
Q Consensus       263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~l~~g~~  329 (366)
                      |.....+...+..+|..+=. +++.-+.........    ..-..+..+.-.+..   +...+.+.+++++|.+
T Consensus        68 ~tp~~~h~~~~~~al~~gk~-V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~~~~~~~~~~~i~~g~i  140 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAGVH-VCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQTV  140 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGHHHHHHHHHHHHHHTCC
T ss_pred             cccchhccccccccccccce-eeccccccCCHHHHHHHHHHHHHcCCcEEEEeccccCHHHHHHHHHHHHCCCC
Confidence            99988888888888877744 445432221111111    122233333322222   2234567778888888

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=90.85  E-value=0.4  Score=38.81  Aligned_cols=101  Identities=15%  Similarity=0.181  Sum_probs=62.1

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....+....+||=+|+|. |..++.+++...--++++++.. +..+.+    .+.+....+.+..  .++.+       .
T Consensus        74 ~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~--~D~~~-------~  142 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVE--GDFFE-------P  142 (253)
T ss_dssp             HHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEE--CCTTS-------C
T ss_pred             hhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcc--ccchh-------h
Confidence            456677788999999876 8899999998753378888864 333333    3344322111111  12111       1


Q ss_pred             hCCCCcEEEEcC-----CCh---HHHHHHHHhhcCCceEEEEcc
Q 017793          253 MGSGIDVSFDCV-----GFD---KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       253 ~~~~~d~vld~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ...++|+|+-..     +.+   ..+..+.+.|+|||+++....
T Consensus       143 ~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         143 LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            145689987532     212   346778899999999988753

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=90.82  E-value=0.24  Score=42.15  Aligned_cols=44  Identities=14%  Similarity=0.160  Sum_probs=35.0

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017793          181 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR  225 (366)
Q Consensus       181 ~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  225 (366)
                      +++|.+|||.| +|-+|...++.+...|. .|+++.++.++.+.++
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            57899999998 68899988887777898 6777777776665544

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.78  E-value=1.3  Score=29.32  Aligned_cols=68  Identities=16%  Similarity=0.239  Sum_probs=46.2

Q ss_pred             CEEEEECCCHHHHHH-HHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          185 TNVMIMGSGPIGLVT-LLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       185 ~~vlI~G~g~vG~~a-i~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      -+|-++|-|++|+.+ .++++..|. .|-+.|..+ +..+.|+++|+.....+  +..+            -.++|+|+-
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~~------------i~~~d~vV~   66 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPH--SADN------------WYDPDLVIK   66 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSC--CTTS------------CCCCSEEEE
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeee--cccc------------cCCCCEEEE
Confidence            367778977778765 588889999 799998776 45667889998653322  2122            135788887


Q ss_pred             cCCCh
Q 017793          263 CVGFD  267 (366)
Q Consensus       263 ~~g~~  267 (366)
                      +.+-+
T Consensus        67 SsAI~   71 (89)
T d1j6ua1          67 TPAVR   71 (89)
T ss_dssp             CTTCC
T ss_pred             ecCcC
Confidence            66543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=90.77  E-value=1.1  Score=33.85  Aligned_cols=43  Identities=16%  Similarity=0.190  Sum_probs=35.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  229 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  229 (366)
                      +|-|+|.|.+|...+.-+...|. .|.+.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47889999999887777777898 68889999999887766554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.71  E-value=0.49  Score=34.80  Aligned_cols=41  Identities=15%  Similarity=0.391  Sum_probs=31.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIA  224 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~--~~~~~~~~  224 (366)
                      .|.++||.|+|.+|.--+..+...|+ .|.+++.  +++-..++
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~~~   54 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKF   54 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCHHHHHHH
Confidence            58899999999999999999999999 5665532  34444443

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=90.57  E-value=0.072  Score=40.67  Aligned_cols=83  Identities=18%  Similarity=0.123  Sum_probs=54.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  264 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  264 (366)
                      +|.|+|+|.+|...+..++.. +++.+.++++++++.      .......+.    +...    +    ...+|+|+.|.
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~~----~~~~----~----~~~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDVA----DVDK----H----ADDVDVLFLCM   66 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEGG----GGGG----T----TTTCSEEEECS
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccch----hhhh----h----ccccceEEEeC
Confidence            689999999998877777754 564454555554331      111111111    1111    1    34699999999


Q ss_pred             CChHHHHHHHHhhcCCceEEEE
Q 017793          265 GFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       265 g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      +...+.+.+..+|..|-.++..
T Consensus        67 p~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEEECC
T ss_pred             CCcccHHHHHHHHHCCCcEEEe
Confidence            9888899999999998887643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.48  E-value=0.19  Score=40.29  Aligned_cols=38  Identities=24%  Similarity=0.358  Sum_probs=31.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      .+.+.+|+|+|+|+.|+.+...++..|. .|..++.+++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            3567899999999999999999999999 6777766553

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.41  E-value=0.29  Score=34.93  Aligned_cols=89  Identities=25%  Similarity=0.283  Sum_probs=54.5

Q ss_pred             CCCEEEEECCCHH-----------HHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          183 PETNVMIMGSGPI-----------GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       183 ~~~~vlI~G~g~v-----------G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ...+|||+|+|+.           +..|+.-+|..|. .++.+.++++....-..+ +|+++- .   +=..+.+.++.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYf-e---Plt~e~v~~Ii~   79 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYI-E---PIHWEVVRKIIE   79 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEEC-S---CCCHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeee-e---cCCHHHHHHHHH
Confidence            3478999998754           3445555566799 788888888865432221 444322 1   222233333332


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcC
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRP  279 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~  279 (366)
                        ....|.++-..|+.-.++.+.++...
T Consensus        80 --~E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          80 --KERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             --HHCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             --HhCcCCeEEEeeeehHhHHHHHHHHc
Confidence              24689999999988667777666543

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.17  E-value=1.4  Score=36.81  Aligned_cols=100  Identities=22%  Similarity=0.283  Sum_probs=62.1

Q ss_pred             hCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          178 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ....++|++||=+.|++ |-=+.+++..++ -..+++.+.+++|...+    +.+|...++....+...+.        .
T Consensus       111 ~l~~~~g~~vlD~CAap-GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~--------~  181 (313)
T d1ixka_         111 ALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG--------E  181 (313)
T ss_dssp             HHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG--------G
T ss_pred             cccCCccceeeecccch-hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc--------c
Confidence            34678999988764433 333445555443 23689999999887655    4577766555444322221        1


Q ss_pred             hCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793          253 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       253 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  286 (366)
                      ....||.|+-   |+|..                         ..+..++..+++||+++..
T Consensus       182 ~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYs  243 (313)
T d1ixka_         182 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS  243 (313)
T ss_dssp             GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEe
Confidence            2567888754   55543                         2556778888999987653

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=90.16  E-value=1.1  Score=33.81  Aligned_cols=98  Identities=21%  Similarity=0.214  Sum_probs=58.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHCC----CCeEEEEc--CChhHHHHHHHcCC-------c-------------eeeecCCCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFG----APRIIITD--VDVQRLSIARNLGA-------D-------------ETAKVSTDI  239 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g----~~~vv~v~--~~~~~~~~~~~lg~-------~-------------~~~~~~~~~  239 (366)
                      +|.|.|-|-+|.+....+-..+    + .++++.  .+.+...++-++..       +             .+..+....
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            5889999999999887765432    3 355553  34455555544321       1             111111111


Q ss_pred             cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                      +   +.   +.+ ...++|+|+||.|.-.....+..+|..+-+-+++..+..
T Consensus        82 p---~~---i~W-~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~  126 (173)
T d1obfo1          82 P---AQ---LPW-GALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG  126 (173)
T ss_dssp             G---GG---SCT-TTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred             H---HH---Ccc-cccccceEEEecccccCHHHHHHHhccCCcceEEecCCC
Confidence            1   11   111 145899999999976566778888888887777765443

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.16  E-value=0.28  Score=34.58  Aligned_cols=39  Identities=21%  Similarity=0.244  Sum_probs=31.6

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .+++...+|+|+|+|.+|.=.++.++.+|. .|..+.+.+
T Consensus        17 ~~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          17 FNIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TTCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             hccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            345667899999999999999999999998 677776543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.11  E-value=2.5  Score=30.87  Aligned_cols=97  Identities=16%  Similarity=0.186  Sum_probs=60.7

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHC--CCCeEEEEcCChh--H-HHHHHHcCCceeeecCCCC-cchH---------------
Q 017793          186 NVMIMG-SGPIGLVTLLAARAF--GAPRIIITDVDVQ--R-LSIARNLGADETAKVSTDI-EDVD---------------  243 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~--g~~~vv~v~~~~~--~-~~~~~~lg~~~~~~~~~~~-~~~~---------------  243 (366)
                      +|.|.| +|.+|..+..+.+..  .+ +|++......  . .+++++|.+..+...++.. ..+.               
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            689999 699999999999986  35 4555544332  2 3456778877665432110 0011               


Q ss_pred             -HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEE
Q 017793          244 -TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       244 -~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~  285 (366)
                       +.+.++.  ....+|+|+.++.+-+.+...+..++.+-++.+
T Consensus        82 ~~~l~~~~--~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMA--ALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHH--TCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHh--cCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence             1111111  134689999988887778888888887766544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=89.88  E-value=2.6  Score=30.62  Aligned_cols=95  Identities=14%  Similarity=0.098  Sum_probs=57.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHH---cCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARN---LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      .+.++|.|.|.+|...++.+...|. .+++++.++++ .+.+.+   .|...+ .  .+..+ ...+++   .+-..++.
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi-~--Gd~~d-~~~L~~---a~i~~a~~   74 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVI-P--GDSND-SSVLKK---AGIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEE-E--SCTTS-HHHHHH---HTTTTCSE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEE-E--ccCcc-hHHHHH---hccccCCE
Confidence            4579999999999999999999998 57777777654 233333   334332 2  11111 223332   24567999


Q ss_pred             EEEcCCChHHH---HHHHHhhcCCceEEEE
Q 017793          260 SFDCVGFDKTM---STALNATRPGGKVCLI  286 (366)
Q Consensus       260 vld~~g~~~~~---~~~~~~l~~~G~~v~~  286 (366)
                      ++-+.+....-   -...+.+.+.-+++..
T Consensus        75 vi~~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            99988865321   1223345566555543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=89.88  E-value=0.67  Score=38.68  Aligned_cols=76  Identities=25%  Similarity=0.294  Sum_probs=43.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC--Ch---hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV--DV---QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~--~~---~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      .+|||.| +|-+|...+..+...|. .|++++.  ..   ++.+.+...+--..+.  .+-.+.. .+.++.+  +.++|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~--~Di~~~~-~l~~~~~--~~~~d   74 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVH--GDIRNKN-DVTRLIT--KYMPD   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEE--CCTTCHH-HHHHHHH--HHCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEE--cccCCHH-HHHHHHH--hcCCc
Confidence            3799998 69999999888888898 6777752  12   2333444433222222  1111211 2222221  33589


Q ss_pred             EEEEcCCC
Q 017793          259 VSFDCVGF  266 (366)
Q Consensus       259 ~vld~~g~  266 (366)
                      +||.+.+.
T Consensus        75 ~Vih~aa~   82 (338)
T d1orra_          75 SCFHLAGQ   82 (338)
T ss_dssp             EEEECCCC
T ss_pred             eEEeeccc
Confidence            99998753

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.80  E-value=1  Score=33.76  Aligned_cols=97  Identities=19%  Similarity=0.208  Sum_probs=59.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEE-cC-ChhHHHHHHHcCCc--------------------eeeecCCCCcchH
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIIT-DV-DVQRLSIARNLGAD--------------------ETAKVSTDIEDVD  243 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v-~~-~~~~~~~~~~lg~~--------------------~~~~~~~~~~~~~  243 (366)
                      +|.|.|-|-+|.++.+.+...+++ ++++ +. +.+...++-++...                    .+..+....+   
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~-iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p---   77 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVE-VALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP---   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCC-EEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG---
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCE-EEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh---
Confidence            688999999999999988877885 4554 33 22444555443211                    0111111111   


Q ss_pred             HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793          244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  290 (366)
Q Consensus       244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  290 (366)
                      +.   +.+ ...++|+|+||.|.-...+.+..++..+.+-+.+..+.
T Consensus        78 ~~---i~W-~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          78 KE---IPW-AEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             GG---CCT-GGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             HH---Ccc-cccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            11   111 13579999999998656677778888777666665444

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.74  E-value=0.18  Score=42.21  Aligned_cols=37  Identities=19%  Similarity=0.366  Sum_probs=30.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .....+|+|+|+|..|+.+...+...|. .|.+++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            3456799999999999998888888898 788887653

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.68  E-value=2.8  Score=34.89  Aligned_cols=113  Identities=21%  Similarity=0.226  Sum_probs=71.7

Q ss_pred             HHHhCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCCeEEEE--cCChhHHHHHHHcCCceeeecC---------------
Q 017793          175 ACRRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVS---------------  236 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~-G~g~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~---------------  236 (366)
                      +.++..++++.+.+|. .+|..|++....++.+|.+-++++  ..++.+.+.++.+|++.+..-.               
T Consensus        55 a~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~  134 (320)
T d1z7wa1          55 AEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEIL  134 (320)
T ss_dssp             HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHH
Confidence            3455667777666665 589999999999999998544444  3455788889999987542210               


Q ss_pred             ----------C-CCc-ch----HHHHHHHHHhhCCCCcEEEEcCCChHHHHH---HHHhhcCCceEEEEc
Q 017793          237 ----------T-DIE-DV----DTDVGKIQNAMGSGIDVSFDCVGFDKTMST---ALNATRPGGKVCLIG  287 (366)
Q Consensus       237 ----------~-~~~-~~----~~~~~~~~~~~~~~~d~vld~~g~~~~~~~---~~~~l~~~G~~v~~g  287 (366)
                                . .+. ++    .....++.++..+.+|.++-++|+..++.-   .++...+.-+++.+.
T Consensus       135 ~~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         135 AKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             HHCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HhCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                      0 000 01    111123444445679999999998765544   334456777776653

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=89.65  E-value=1.8  Score=35.82  Aligned_cols=104  Identities=16%  Similarity=0.179  Sum_probs=66.7

Q ss_pred             HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceeeecC----------------
Q 017793          175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVS----------------  236 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~----------------  236 (366)
                      +.+...++++..|+...+|.-|+++...|+..|.+.+|++.  .++.+...++.+|+..+....                
T Consensus        52 a~~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~  131 (310)
T d1y7la1          52 AEKDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVA  131 (310)
T ss_dssp             HHHTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHH
Confidence            33556667777766667899999999999999997666653  344677888889987653210                


Q ss_pred             ----------C-CCcc-h----HHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhc
Q 017793          237 ----------T-DIED-V----DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR  278 (366)
Q Consensus       237 ----------~-~~~~-~----~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~  278 (366)
                                . ..+. .    ...-.++.+..+..+|.++.++|+...+.-....++
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         132 SDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             HCTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             hhcCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                      0 0000 0    011122333445579999999998876666655553

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=89.61  E-value=2.9  Score=30.86  Aligned_cols=40  Identities=20%  Similarity=0.433  Sum_probs=33.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRL  221 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~  221 (366)
                      .+..+|.|+|+|.+|......+...| ++.++.++.++++.
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            34579999999999999888888887 46799999887664

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.54  E-value=0.17  Score=40.57  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=28.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-CeEEEEcCChh
Q 017793          184 ETNVMIMG-SGPIGLVTLLAARAFGA-PRIIITDVDVQ  219 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai~la~~~g~-~~vv~v~~~~~  219 (366)
                      +.+|||.| +|-+|...++.+...|. ..|+++.+++.
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~   51 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL   51 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh
Confidence            46899998 69999998888877774 46888776553

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=89.51  E-value=1.7  Score=32.50  Aligned_cols=99  Identities=20%  Similarity=0.215  Sum_probs=60.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEE-cC--ChhHHHHHHHcCCc--------------------eeeecCCCCcc
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIIT-DV--DVQRLSIARNLGAD--------------------ETAKVSTDIED  241 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v-~~--~~~~~~~~~~lg~~--------------------~~~~~~~~~~~  241 (366)
                      +|.|.|-|-+|.++...+-.. .. .++++ +.  +.+...++-++...                    .+..++..  +
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~--~   79 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQER--D   79 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS--S
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECC--C
Confidence            688999999999988776644 46 45555 42  34566666553211                    01111111  1


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE  292 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  292 (366)
                       .+.   +.+ ...++|+|+||.|--.....+..++..|-+-+++..+..+
T Consensus        80 -p~~---i~W-~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~d  125 (169)
T d1u8fo1          80 -PSK---IKW-GDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSAD  125 (169)
T ss_dssp             -GGG---CCT-TTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSS
T ss_pred             -hhh---CCc-cccCCCEEEEecceeccHHHHHHHHhcCCceEeecccccc
Confidence             111   111 1358999999999865666777788888877777655443

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.48  E-value=0.16  Score=40.98  Aligned_cols=33  Identities=18%  Similarity=0.367  Sum_probs=27.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      +|+|+|+|..|+.|...++..|...|.+++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999988888888975588887654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.42  E-value=0.14  Score=42.34  Aligned_cols=32  Identities=28%  Similarity=0.425  Sum_probs=28.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      +|+|+|+|++|+++...++..|. .|++++.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            59999999999999999998999 688887765

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=89.33  E-value=0.2  Score=37.11  Aligned_cols=82  Identities=17%  Similarity=0.054  Sum_probs=47.9

Q ss_pred             EEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793          188 MIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD  267 (366)
Q Consensus       188 lI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  267 (366)
                      -++|+|.+|.+.++.++. +.....+..++.++.+.+.+.+.....+   . .+.           -...|+||-|+...
T Consensus         3 gfIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~---~-~~~-----------~~~~DiVil~v~d~   66 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAAT---L-EKH-----------PELNGVVFVIVPDR   66 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCS---S-CCC-----------CC---CEEECSCTT
T ss_pred             EEEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccc---h-hhh-----------hccCcEEEEeccch
Confidence            467999999887776654 3323345678888887776655433221   1 111           24579999999855


Q ss_pred             HHHHHHHHhhcCCceE-EEE
Q 017793          268 KTMSTALNATRPGGKV-CLI  286 (366)
Q Consensus       268 ~~~~~~~~~l~~~G~~-v~~  286 (366)
                       .+....+.|+..+++ +.+
T Consensus        67 -~i~~v~~~l~~~~~ivi~~   85 (153)
T d2i76a2          67 -YIKTVANHLNLGDAVLVHC   85 (153)
T ss_dssp             -THHHHHTTTCCSSCCEEEC
T ss_pred             -hhhHHHhhhcccceeeeec
Confidence             566777777655544 444

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.30  E-value=0.33  Score=34.07  Aligned_cols=35  Identities=23%  Similarity=0.381  Sum_probs=29.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .+.+++|+|+|.+|.=+.+.+..+|. .|..+.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            45899999999999999999999999 566665544

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=89.28  E-value=0.85  Score=36.37  Aligned_cols=94  Identities=10%  Similarity=0.106  Sum_probs=57.2

Q ss_pred             CEEEEECCCH----HHHHHHHHHHHC--CCCeEEEEcCChhHH-HHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793          185 TNVMIMGSGP----IGLVTLLAARAF--GAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  257 (366)
Q Consensus       185 ~~vlI~G~g~----vG~~ai~la~~~--g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (366)
                      =+|.|+|+|.    ++..-+...+..  +++.+.+.+.+.++. +++++++......|.    ++.+    +.+  ...+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~----~~~~----l~~--~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD----SLES----FAQ--YKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES----CHHH----HHH--CTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec----chhh----ccc--cccc
Confidence            4789999765    333333334433  464444566776654 466778765443332    2222    322  4679


Q ss_pred             cEEEEcCCChHHHHHHHHhhcCC-----ceEEEEcc
Q 017793          258 DVSFDCVGFDKTMSTALNATRPG-----GKVCLIGL  288 (366)
Q Consensus       258 d~vld~~g~~~~~~~~~~~l~~~-----G~~v~~g~  288 (366)
                      |+|+.|+....+.+.+..+|..|     ++-+++.-
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EK  122 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEW  122 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEec
Confidence            99999999887888888888654     45566653

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.27  E-value=1.3  Score=32.49  Aligned_cols=39  Identities=18%  Similarity=0.221  Sum_probs=28.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR  225 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~  225 (366)
                      +|-|+|.|.+|...+.-+...|. .+++.+...++...++
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHh
Confidence            57889999999988888887898 5666665555444333

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.24  E-value=1.2  Score=34.49  Aligned_cols=75  Identities=23%  Similarity=0.244  Sum_probs=49.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh-----------C
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-----------G  254 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-----------~  254 (366)
                      +|.|+|+|-+|+.....+...|. .|+++|.++++.+.+.+-....      .++...+.+.+.....           -
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g~~p~------~e~~~~~~l~~~~~~~~~~~~~~~~~~i   74 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQGKSPI------VEPGLEALLQQGRQTGRLSGTTDFKKAV   74 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSS------CCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcccCCcc------cchhhhhhhhhhhcccccccCCCHHHHH
Confidence            58899999999887666667788 7999999999988776533211      1123333332211100           0


Q ss_pred             CCCcEEEEcCCCh
Q 017793          255 SGIDVSFDCVGFD  267 (366)
Q Consensus       255 ~~~d~vld~~g~~  267 (366)
                      ...|++|-|++++
T Consensus        75 ~~~d~i~i~VpTP   87 (202)
T d1mv8a2          75 LDSDVSFICVGTP   87 (202)
T ss_dssp             HTCSEEEECCCCC
T ss_pred             hhCCEEEEecCcc
Confidence            2579999999875

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=89.19  E-value=0.74  Score=37.78  Aligned_cols=34  Identities=24%  Similarity=0.324  Sum_probs=26.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      +-.+|||.| +|-+|...+..+...|. .|+++.++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~   36 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRP   36 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence            346799998 69999999988888898 46566554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.09  E-value=0.51  Score=34.36  Aligned_cols=37  Identities=32%  Similarity=0.485  Sum_probs=28.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHH
Q 017793          186 NVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLS  222 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~  222 (366)
                      +|.|+|+|.+|......+...+ ++.++.+|.++++.+
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~   39 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAE   39 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeccccccc
Confidence            6788999999988777666655 457999998886643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=89.02  E-value=0.65  Score=34.08  Aligned_cols=39  Identities=28%  Similarity=0.457  Sum_probs=31.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHH
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLS  222 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~  222 (366)
                      ..+|.|+|+|.+|......+...| ++.++.+|.++++.+
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~   44 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTK   44 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhH
Confidence            468999999999988777777666 467999998887643

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.89  E-value=0.43  Score=38.41  Aligned_cols=33  Identities=27%  Similarity=0.334  Sum_probs=29.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD  215 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~  215 (366)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVS   61 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEee
Confidence            368999999999999999999999999 677664

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.85  E-value=0.93  Score=31.96  Aligned_cols=39  Identities=26%  Similarity=0.330  Sum_probs=31.0

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ..-+.+.+|+|+|+|.+|.-+++.+..+|. .|..++..+
T Consensus        25 ~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          25 TVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             hhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            334567899999999999999999999999 577775543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.77  E-value=0.38  Score=36.68  Aligned_cols=38  Identities=18%  Similarity=0.369  Sum_probs=31.1

Q ss_pred             EEEEE-CCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793          186 NVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       186 ~vlI~-G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~  224 (366)
                      +|.|+ |+|.+|.+..+.+...|. .|+...+++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            57888 589999999999998999 677777888876544

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.74  E-value=0.45  Score=37.49  Aligned_cols=100  Identities=13%  Similarity=0.159  Sum_probs=59.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh-hCCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA-MGSG  256 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  256 (366)
                      +..+||-+|++. |..++.+|+++.- .++++++.+++..+.++    +.|...-+.+..  .+..+.+.++... ....
T Consensus        56 kpk~ILEiGt~~-G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~--Gd~~e~l~~l~~~~~~~~  132 (214)
T d2cl5a1          56 SPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILN--GASQDLIPQLKKKYDVDT  132 (214)
T ss_dssp             CCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHGGGHHHHSCCCC
T ss_pred             CCCEEEEEccCc-hhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeee--ccccccccchhhcccccc
Confidence            457899999755 6777888887632 38999999998777664    456543222211  3444444444432 2356


Q ss_pred             CcEEEEcCCChH-----HHHHHHHhhcCCceEEE
Q 017793          257 IDVSFDCVGFDK-----TMSTALNATRPGGKVCL  285 (366)
Q Consensus       257 ~d~vld~~g~~~-----~~~~~~~~l~~~G~~v~  285 (366)
                      +|++|--.....     .+...++.|++||.++.
T Consensus       133 ~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         133 LDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            898864332221     13334566899997554

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=88.56  E-value=0.75  Score=36.95  Aligned_cols=32  Identities=28%  Similarity=0.319  Sum_probs=26.0

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .|||.| ++++|.+..+.+...|+ +|+.+++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-QIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCh
Confidence            468888 68999998888888999 677777654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.45  E-value=0.52  Score=38.21  Aligned_cols=40  Identities=18%  Similarity=0.159  Sum_probs=28.9

Q ss_pred             CCEEEEEC-CCHHHHHHH-HHHHH--CCCCeEEEEcCChhHHHHH
Q 017793          184 ETNVMIMG-SGPIGLVTL-LAARA--FGAPRIIITDVDVQRLSIA  224 (366)
Q Consensus       184 ~~~vlI~G-~g~vG~~ai-~la~~--~g~~~vv~v~~~~~~~~~~  224 (366)
                      |..+||.| ++++|.+.+ +||+.  .|+ .|+.+++++++.+.+
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            55667778 589998755 55653  588 788888888877644

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=88.19  E-value=0.48  Score=33.54  Aligned_cols=37  Identities=27%  Similarity=0.560  Sum_probs=30.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ++++.+++|.|+|.+|.=.+..++..|. .|..++.++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~   63 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQP   63 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeecc
Confidence            5678999999999999988888888898 677776654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.19  E-value=0.41  Score=33.57  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=29.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .++++|+|+|.+|.=+++.++.+|. .|..+.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            5789999999999999999999999 677776654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=88.11  E-value=0.49  Score=35.12  Aligned_cols=41  Identities=20%  Similarity=0.160  Sum_probs=33.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS  222 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~  222 (366)
                      ++..+|.|+|+|.+|.....++...+...++.++.++++.+
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~   45 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPE   45 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccch
Confidence            45688999999999988888888778767889988876543

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.07  E-value=0.44  Score=33.59  Aligned_cols=86  Identities=19%  Similarity=0.146  Sum_probs=50.8

Q ss_pred             CCEEEEECCCHH-----------HHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793          184 ETNVMIMGSGPI-----------GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  252 (366)
Q Consensus       184 ~~~vlI~G~g~v-----------G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
                      ..+|||+|+|+.           +..|+.-+|..|. .+|.+.++++....-.. -+|+++- .   +=..+.+.++.+ 
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d-~aD~lYf-e---plt~e~v~~Ii~-   76 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYD-TSDRLYF-E---PVTLEDVLEIVR-   76 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTT-SSSEEEC-C---CCSHHHHHHHHH-
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChh-hcCceEE-c---cCCHHHHHHHHH-
Confidence            468999998753           3455556666799 78888888886543111 1444322 1   112223333322 


Q ss_pred             hCCCCcEEEEcCCChHHHHHHHHhh
Q 017793          253 MGSGIDVSFDCVGFDKTMSTALNAT  277 (366)
Q Consensus       253 ~~~~~d~vld~~g~~~~~~~~~~~l  277 (366)
                       ....|.|+-..|+.-.++.+.++-
T Consensus        77 -~E~p~~ii~~~GGQtalnla~~L~  100 (121)
T d1a9xa4          77 -IEKPKGVIVQYGGQTPLKLARALE  100 (121)
T ss_dssp             -HHCCSEEECSSSTHHHHTTHHHHH
T ss_pred             -HhCCCEEEeehhhhhHHHHHHHHH
Confidence             245789999999886555554433

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=87.89  E-value=0.28  Score=38.30  Aligned_cols=35  Identities=34%  Similarity=0.537  Sum_probs=31.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .+.+|.|+|.|.+|...+++++..|+ +|++.++..
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~   78 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYP   78 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCcc
Confidence            36799999999999999999999999 788887654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=87.89  E-value=0.36  Score=36.97  Aligned_cols=83  Identities=14%  Similarity=0.138  Sum_probs=55.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.+|.|+|.|.+|....++++..|+ +|++.++++..       +...   +   ..++    .++.    ...|+|+.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~---~---~~~l----~ell----~~sDiv~~   98 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWR---F---TNSL----EEAL----REARAAVC   98 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSC---C---BSCS----HHHH----TTCSEEEE
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------ccee---e---eech----hhhh----hccchhhc
Confidence            47899999999999999999999999 78888765431       1111   0   0122    2232    45888887


Q ss_pred             cCCCh-HH----HHHHHHhhcCCceEEEEc
Q 017793          263 CVGFD-KT----MSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~~-~~----~~~~~~~l~~~G~~v~~g  287 (366)
                      +..-. ++    -...++.|+++..++-++
T Consensus        99 ~~pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1          99 ALPLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccccccccccccccceeeeccccceEEecc
Confidence            66432 11    135667888888777664

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=87.88  E-value=1.4  Score=36.68  Aligned_cols=99  Identities=19%  Similarity=0.249  Sum_probs=61.3

Q ss_pred             EEEEC-CCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH------------
Q 017793          187 VMIMG-SGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN------------  251 (366)
Q Consensus       187 vlI~G-~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~------------  251 (366)
                      .+|.+ +|..|.++...|+..|...++.+.  .++++.+.++.+|++.+.. .....+.....+++.+            
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~-~~~~~~~~~~a~~~a~~~g~~~~~~~~~  149 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMY-DRYKDDREKMAKEISEREGLTIIPPYDH  149 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEE-CTTTTCHHHHHHHHHHHHTCBCCCSSSS
T ss_pred             eeeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEec-cCCchHHHHHHHHHHHhcCCEecCCccc
Confidence            34544 799999999999999986555553  3456778888899876542 2222222222222221            


Q ss_pred             ----------------hhCCCCcEEEEcCCChHHHH---HHHHhhcCCceEEEEc
Q 017793          252 ----------------AMGSGIDVSFDCVGFDKTMS---TALNATRPGGKVCLIG  287 (366)
Q Consensus       252 ----------------~~~~~~d~vld~~g~~~~~~---~~~~~l~~~G~~v~~g  287 (366)
                                      +. +.+|.++-++|+..++.   ..++.+.+..+++.+.
T Consensus       150 ~~~~~g~~t~~~Ei~~q~-~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~  203 (318)
T d1v71a1         150 PHVLAGQGTAAKELFEEV-GPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE  203 (318)
T ss_dssp             HHHHHHHTHHHHHHHHHH-CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             cccccccchHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCCceeeccc
Confidence                            11 35799998888765433   3445567777777653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=87.72  E-value=0.35  Score=41.01  Aligned_cols=36  Identities=19%  Similarity=0.191  Sum_probs=30.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      .+.+|||.| +|-+|...++.+...|. .|+++++++.
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~   43 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAP   43 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCC
Confidence            478999998 69999999999999999 6888877654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.66  E-value=3  Score=34.52  Aligned_cols=102  Identities=16%  Similarity=0.168  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhhC
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMG  254 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  254 (366)
                      +..++.+||=..++. |.+++..++ .|+ .|+.++.+++..+.+++    .|.+. -+.+..  .|..+.++.... .+
T Consensus       129 ~~~~~~rVLdlf~~t-G~~sl~aa~-~GA-~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~--~D~~~~l~~~~~-~~  202 (309)
T d2igta1         129 TADRPLKVLNLFGYT-GVASLVAAA-AGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC--EDAMKFIQREER-RG  202 (309)
T ss_dssp             HSSSCCEEEEETCTT-CHHHHHHHH-TTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC--SCHHHHHHHHHH-HT
T ss_pred             hccCCCeEEEecCCC-cHHHHHHHh-CCC-eEEEEeChHHHHHHHHHhhhhhcccCCcEEEEe--CCHHHhHHHHhh-cC
Confidence            346688999885432 444445554 588 79999999998888875    23321 112212  355555554432 25


Q ss_pred             CCCcEEEEcCC-----C-----------hHHHHHHHHhhcCCceEEEEc
Q 017793          255 SGIDVSFDCVG-----F-----------DKTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       255 ~~~d~vld~~g-----~-----------~~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ..||+||---+     .           ......+..+|.++|.++++.
T Consensus       203 ~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t  251 (309)
T d2igta1         203 STYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT  251 (309)
T ss_dssp             CCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred             CCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence            78999974211     0           113345566788898766553

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=87.54  E-value=0.26  Score=38.14  Aligned_cols=86  Identities=9%  Similarity=0.215  Sum_probs=52.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee----eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET----AKVSTDIEDVDTDVGKIQNAMGSGIDVS  260 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~v  260 (366)
                      .+|.|+|+|..|.+...++...|- .|....++++..+.+.+-+....    +..... -.+...+.+..    .+.|++
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~-i~~t~~l~~a~----~~ad~i   81 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASN-ITFTSDVEKAY----NGAEII   81 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTT-EEEESCHHHHH----TTCSCE
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccc-cccchhhhhcc----CCCCEE
Confidence            369999999999988877776676 67777888888877765432110    011111 01111222221    468999


Q ss_pred             EEcCCChHHHHHHHHhh
Q 017793          261 FDCVGFDKTMSTALNAT  277 (366)
Q Consensus       261 ld~~g~~~~~~~~~~~l  277 (366)
                      +-+++.. .+...++.+
T Consensus        82 iiavPs~-~~~~~~~~~   97 (189)
T d1n1ea2          82 LFVIPTQ-FLRGFFEKS   97 (189)
T ss_dssp             EECSCHH-HHHHHHHHH
T ss_pred             EEcCcHH-HHHHHHHHH
Confidence            9999865 455555444

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.52  E-value=0.52  Score=33.37  Aligned_cols=34  Identities=21%  Similarity=0.397  Sum_probs=28.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ...+++|+|+|.+|.=.++++..+|. .|..+...
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~   55 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQ   55 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEec
Confidence            35799999999999999999999999 67666554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.48  E-value=0.51  Score=33.20  Aligned_cols=34  Identities=21%  Similarity=0.291  Sum_probs=27.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      .+++++|+|+|.+|.=..+.++.+|. .|..+..+
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~   54 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAM   54 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEee
Confidence            45889999999999999999999999 55555443

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=87.34  E-value=3.9  Score=30.30  Aligned_cols=99  Identities=19%  Similarity=0.195  Sum_probs=59.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEEcC--ChhHHHHHHHcCC-------c-------------eeeecCCCCcch
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDV--DVQRLSIARNLGA-------D-------------ETAKVSTDIEDV  242 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~--~~~~~~~~~~lg~-------~-------------~~~~~~~~~~~~  242 (366)
                      +|.|.|-|-+|.++.+.+... .+ .++++.-  +.+...++-++..       +             .+..++...+. 
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~-   80 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA-   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG-
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChH-
Confidence            578999999999999887765 35 4555532  2244445544321       1             01111111111 


Q ss_pred             HHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC
Q 017793          243 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE  292 (366)
Q Consensus       243 ~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  292 (366)
                        .+.+-    ..++|+|+||.|--.....+..+|..|-+-+.+..+..+
T Consensus        81 --~i~W~----~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~d  124 (166)
T d1gado1          81 --NLKWD----EVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKD  124 (166)
T ss_dssp             --GGCHH----HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS
T ss_pred             --HCCcc----ccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccccc
Confidence              11111    247999999999766667787889888877777655443

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.33  E-value=0.35  Score=40.45  Aligned_cols=35  Identities=26%  Similarity=0.480  Sum_probs=29.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ++..+|+|+|+|..|+.|...+...|. .|.+.+.+
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            456789999999999999998888999 78888654

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.19  E-value=0.33  Score=39.64  Aligned_cols=45  Identities=22%  Similarity=0.183  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017793          180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  226 (366)
Q Consensus       180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  226 (366)
                      ....|.++|=+|||+ |...+..+...+ ..|++++-++...+.+++
T Consensus        51 g~~~g~~vLDiGcG~-g~~~~~~~~~~~-~~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          51 GEVSGRTLIDIGSGP-TVYQLLSACSHF-EDITMTDFLEVNRQELGR   95 (263)
T ss_dssp             SCSCCSEEEEETCTT-CCGGGTTGGGGC-SEEEEECSCHHHHHHHHH
T ss_pred             CCCCCcEEEEeccCC-CHHHHHHhcccC-CeEEEEeCCHHHHHHHHH
Confidence            456789999999876 544443443334 489999999999888875

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=87.01  E-value=0.39  Score=37.22  Aligned_cols=88  Identities=19%  Similarity=0.289  Sum_probs=53.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .|.++.|+|.|.+|...+++++..|+ +|++.++..... .....+....       .++.+    +.    ...|+|.-
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~-------~~l~~----ll----~~sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV-------STLQD----LL----FHSDCVTL  110 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC-------SSHHH----HH----HHCSEEEE
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc-------cchhh----cc----ccCCEEEE
Confidence            47899999999999999999999999 788887654432 2233343221       12222    22    13677766


Q ss_pred             cCCC-hHH----HHHHHHhhcCCceEEEEc
Q 017793          263 CVGF-DKT----MSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~-~~~----~~~~~~~l~~~G~~v~~g  287 (366)
                      +.+- +.+    -...++.|+++..++-++
T Consensus       111 ~~plt~~T~~li~~~~l~~mk~~a~lIN~s  140 (193)
T d1mx3a1         111 HCGLNEHNHHLINDFTVKQMRQGAFLVNTA  140 (193)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred             eecccccchhhhhHHHHhccCCCCeEEecC
Confidence            5542 211    123456777777666554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=86.86  E-value=0.46  Score=37.94  Aligned_cols=35  Identities=31%  Similarity=0.451  Sum_probs=28.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      +.-.+|+|+|+|..|+++...+...|. .|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            344689999999999998888888899 68888753

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.83  E-value=0.32  Score=39.30  Aligned_cols=33  Identities=21%  Similarity=0.412  Sum_probs=27.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      .|+|+|+|+.|++|...+...|. +|++++.+++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            38899999999998887877898 6888887654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.80  E-value=0.39  Score=40.35  Aligned_cols=34  Identities=24%  Similarity=0.288  Sum_probs=29.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ..+|+|+|||..|+.++..+...|. .|.+++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            4689999999999998888888898 788887654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=86.78  E-value=2  Score=31.42  Aligned_cols=92  Identities=12%  Similarity=0.136  Sum_probs=52.4

Q ss_pred             CCCEEEEEC--CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793          183 PETNVMIMG--SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMGS  255 (366)
Q Consensus       183 ~~~~vlI~G--~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  255 (366)
                      .|.+||=.+  +|.+|+   ..+. .|+.+|+.++.+++..+.+++    ++... +..+.   .+..+.+..    ...
T Consensus        14 ~g~~vlDl~~GtG~~~i---ea~~-rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~---~D~~~~l~~----~~~   82 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAI---EAVS-RGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAERAIDC----LTG   82 (152)
T ss_dssp             CSCEEEEETCTTCHHHH---HHHH-TTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHHHHHHH----BCS
T ss_pred             CCCeEEEcCCccCHHHH---HHHH-hCcceeeeehhchhhhhhhhhhhhhcccccchhhhc---ccccccccc----ccc
Confidence            577888875  455555   4333 688899999999887766554    55543 22222   233333322    356


Q ss_pred             CCcEEEEcCC-ChHHHHHHHH------hhcCCceEEE
Q 017793          256 GIDVSFDCVG-FDKTMSTALN------ATRPGGKVCL  285 (366)
Q Consensus       256 ~~d~vld~~g-~~~~~~~~~~------~l~~~G~~v~  285 (366)
                      .+|+||---+ ........++      .|+++|.++.
T Consensus        83 ~fDiIf~DPPy~~~~~~~~l~~i~~~~~L~~~g~iii  119 (152)
T d2esra1          83 RFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVC  119 (152)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             ccceeEechhhccchHHHHHHHHHHCCCcCCCeEEEE
Confidence            7999976432 1122223333      3566776654

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=86.77  E-value=4.3  Score=30.20  Aligned_cols=98  Identities=17%  Similarity=0.196  Sum_probs=58.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHC---CCCeEEEE-cC-ChhHHHHHHHcCC-------c-------------eeeecCCCCc
Q 017793          186 NVMIMGSGPIGLVTLLAARAF---GAPRIIIT-DV-DVQRLSIARNLGA-------D-------------ETAKVSTDIE  240 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~---g~~~vv~v-~~-~~~~~~~~~~lg~-------~-------------~~~~~~~~~~  240 (366)
                      +|.|.|-|-+|.++.+.+...   .+ .++++ +. +.+...++-++..       +             .+..+....+
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            789999999999988877632   35 45565 22 3455556554321       0             0111111111


Q ss_pred             chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                         +.+.+-    ..++|+|+||.|.-.....+..++..|-+-+.+..+..
T Consensus        81 ---~~i~W~----~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~k  124 (169)
T d1hdgo1          81 ---SKLPWK----DLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK  124 (169)
T ss_dssp             ---GGSCHH----HHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             ---hhCCcc----ccCCCEEEEecceeccccchhhhccCCCceEEEecccC
Confidence               111111    23799999999986567778788888876676655443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=86.59  E-value=4.2  Score=29.14  Aligned_cols=37  Identities=19%  Similarity=0.312  Sum_probs=30.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHH
Q 017793          186 NVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLS  222 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~  222 (366)
                      +|.|+|+|.+|......+...+ ++.++.+|.++++.+
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~   39 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence            5888999999998888777777 467999998887654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.52  E-value=0.7  Score=33.20  Aligned_cols=37  Identities=19%  Similarity=0.340  Sum_probs=31.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ++++.+++|+|+|.+|.=++..++..|. .|..++..+
T Consensus        32 ~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          32 LIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            5678999999999999998888888998 677776544

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.50  E-value=0.34  Score=38.81  Aligned_cols=31  Identities=32%  Similarity=0.659  Sum_probs=25.8

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      |+|+|+|+.|+++...+...|. +|+.++.++
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7899999999987777777899 688887654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=86.48  E-value=0.77  Score=33.83  Aligned_cols=39  Identities=21%  Similarity=0.303  Sum_probs=32.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL  221 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~  221 (366)
                      |..+|.|+|+|.+|.....++...+...++.++.++++.
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            457899999999998888888888887899998877654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=86.43  E-value=0.79  Score=33.41  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=26.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhH
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQR  220 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~  220 (366)
                      +|.|+|+|.+|......+...+. +.++.++.++++
T Consensus         3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            68899999999888877777664 578998877765

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.30  E-value=0.63  Score=34.42  Aligned_cols=35  Identities=20%  Similarity=0.301  Sum_probs=29.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      -+++|+|+|+|.+|.=++..+.+.|+..|..+.+.
T Consensus        44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            46789999999999999998888999777777543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=86.29  E-value=4.5  Score=29.16  Aligned_cols=82  Identities=17%  Similarity=0.122  Sum_probs=53.0

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      .+|.|+| .|.+|......++..|. .|.+.+++++........+++.++.. .........+.++..... .=.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~-~~~~~~~~v~~~~~~~~~-~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVS-VPINLTLETIERLKPYLT-ENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEEC-SCGGGHHHHHHHHGGGCC-TTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccc-cchhhheeeeeccccccc-CCceEEEe
Confidence            5899999 79999999998998999 57888887766555455566665543 223344444444433222 22477887


Q ss_pred             CCChHH
Q 017793          264 VGFDKT  269 (366)
Q Consensus       264 ~g~~~~  269 (366)
                      ......
T Consensus        87 ~Svk~~   92 (152)
T d2pv7a2          87 TSVKRE   92 (152)
T ss_dssp             CSCCHH
T ss_pred             cccCHH
Confidence            766533

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=86.26  E-value=0.52  Score=35.28  Aligned_cols=36  Identities=11%  Similarity=0.251  Sum_probs=28.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCC-eEEEEcCCh
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDV  218 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~  218 (366)
                      .|.+|+|+|+|.+|+.+++.++..+.+ .|..++.++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999988888877753 577776554

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=86.02  E-value=4.2  Score=33.82  Aligned_cols=115  Identities=14%  Similarity=0.112  Sum_probs=67.4

Q ss_pred             HHHHHHhCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceeeecC------------
Q 017793          172 GVHACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVS------------  236 (366)
Q Consensus       172 a~~~l~~~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~------------  236 (366)
                      |++.+.... -.+..+|+...+|..|.+....++..|...++.+.  .+.++.+.++.+|++.+..-.            
T Consensus        62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~  141 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIEL  141 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhh
Confidence            344444322 23344455556888899999999999996555553  345678888999987543110            


Q ss_pred             -----------CCCcch----HHHHHHHHHhhCCCCcEEEEcCCChHHHH---HHHHhhcCCceEEEEc
Q 017793          237 -----------TDIEDV----DTDVGKIQNAMGSGIDVSFDCVGFDKTMS---TALNATRPGGKVCLIG  287 (366)
Q Consensus       237 -----------~~~~~~----~~~~~~~~~~~~~~~d~vld~~g~~~~~~---~~~~~l~~~G~~v~~g  287 (366)
                                 .+++..    .....++.++ ...+|.++-++|+..++.   ..++.+.+.-+++.+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         142 SQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                       001100    0111112222 246999999999876544   3444556777887764

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.92  E-value=0.34  Score=37.99  Aligned_cols=30  Identities=30%  Similarity=0.538  Sum_probs=25.9

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      |+|+|+|+.|+.+...+...|. +|++++..
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            7889999999999999998999 67777654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.80  E-value=1  Score=34.69  Aligned_cols=107  Identities=19%  Similarity=0.143  Sum_probs=61.3

Q ss_pred             HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC---CceeeecCCCCcchHHHHHHHHHhh
Q 017793          177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQNAM  253 (366)
Q Consensus       177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~~  253 (366)
                      .....++++.++=.++|. |-.+-.+++...-.+++++|.+++..+.+++.-   .+.+..+..   +|...-..+....
T Consensus        17 ~~l~~~~~~~~lD~t~G~-Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~---~f~~~~~~~~~~~   92 (192)
T d1m6ya2          17 EFLKPEDEKIILDCTVGE-GGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKV---SYREADFLLKTLG   92 (192)
T ss_dssp             HHHCCCTTCEEEETTCTT-SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEEC---CGGGHHHHHHHTT
T ss_pred             HhhCCCCCCEEEEecCCC-cHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhH---HHhhHHHHHHHcC
Confidence            445678888664444454 444556666554348999999999988887632   112222222   3332222222223


Q ss_pred             CCCCcEEEEcCCCh---------------HHHHHHHHhhcCCceEEEEc
Q 017793          254 GSGIDVSFDCVGFD---------------KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       254 ~~~~d~vld~~g~~---------------~~~~~~~~~l~~~G~~v~~g  287 (366)
                      ...+|.|+--.|-.               ..+..+.+.|+++|+++.+.
T Consensus        93 ~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~  141 (192)
T d1m6ya2          93 IEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVIS  141 (192)
T ss_dssp             CSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred             CCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeec
Confidence            46788875434431               24556667788899887664

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.76  E-value=0.4  Score=36.34  Aligned_cols=30  Identities=30%  Similarity=0.491  Sum_probs=25.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      -|+|+|+|+.|+.|...+.+.|. +++.++.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            37899999999999999999999 5777764

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.61  E-value=0.42  Score=37.80  Aligned_cols=31  Identities=16%  Similarity=0.241  Sum_probs=26.5

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      |+|+|+|..|+.++..+...|. +|.+++.++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7889999999888877778898 799998765

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=85.60  E-value=1.2  Score=34.78  Aligned_cols=95  Identities=15%  Similarity=0.186  Sum_probs=60.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  258 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (366)
                      ++++++=+|+|+ |.=.+-+|-..--..+..++++.+|..++++    ++.+.+..+..+.+++.         ....||
T Consensus        65 ~~~~ilDiGsGa-G~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E~~~---------~~~~fD  134 (207)
T d1jsxa_          65 QGERFIDVGTGP-GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---------SEPPFD  134 (207)
T ss_dssp             CSSEEEEETCTT-TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---------CCSCEE
T ss_pred             cCCceeeeeccC-CceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchhhhc---------cccccc
Confidence            456777778665 5555566655543489999999999988764    77764433333333321         134688


Q ss_pred             EEEE-cCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793          259 VSFD-CVGFD-KTMSTALNATRPGGKVCLIG  287 (366)
Q Consensus       259 ~vld-~~g~~-~~~~~~~~~l~~~G~~v~~g  287 (366)
                      +|.. +++.. ..+..+...++++|+++.+-
T Consensus       135 ~V~sRA~~~~~~ll~~~~~~l~~~g~~~~~K  165 (207)
T d1jsxa_         135 GVISRAFASLNDMVSWCHHLPGEQGRFYALK  165 (207)
T ss_dssp             EEECSCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred             eehhhhhcCHHHHHHHHHHhcCCCcEEEEEC
Confidence            8774 44432 34555666788999988773

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=85.56  E-value=0.2  Score=38.53  Aligned_cols=34  Identities=21%  Similarity=0.367  Sum_probs=28.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ++..|+|+|+|+.|+.|...+.+.|. .++.++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEee
Confidence            45679999999999999999999999 56666543

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=85.49  E-value=3.3  Score=35.42  Aligned_cols=55  Identities=20%  Similarity=0.151  Sum_probs=41.4

Q ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceee
Q 017793          179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETA  233 (366)
Q Consensus       179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~  233 (366)
                      .+++++.+|+-..+|..|++....|+.+|.+-++++.  .+++|.+.++.+|++.+.
T Consensus       139 ~~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~  195 (382)
T d1wkva1         139 RRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIV  195 (382)
T ss_dssp             TTSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             hccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceee
Confidence            4567777654456899999999999999995455553  355788889999997654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.39  E-value=0.66  Score=32.31  Aligned_cols=34  Identities=26%  Similarity=0.502  Sum_probs=28.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      +++++|+|+|.+|.=+++.++.+|. .|..+.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4899999999999999999999998 676765543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.38  E-value=0.55  Score=38.78  Aligned_cols=32  Identities=22%  Similarity=0.450  Sum_probs=28.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITD  215 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~  215 (366)
                      .|.+|+|.|.|.||..+++++...|+ +|+++.
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            57899999999999999999999999 677764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.24  E-value=0.69  Score=32.89  Aligned_cols=35  Identities=23%  Similarity=0.394  Sum_probs=29.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      +.+++++|+|+|.+|.=.++..+.+|. .|..+...
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~   58 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMM   58 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEee
Confidence            446899999999999998899999999 66666543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=85.07  E-value=2.1  Score=32.08  Aligned_cols=75  Identities=17%  Similarity=0.306  Sum_probs=45.0

Q ss_pred             CCCEEEEECCCHHHHHH---HHHHHH--CCCCeEEEEcCChhHHHHH--------HHcCCceeeecCCCCcchHHHHHHH
Q 017793          183 PETNVMIMGSGPIGLVT---LLAARA--FGAPRIIITDVDVQRLSIA--------RNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~a---i~la~~--~g~~~vv~v~~~~~~~~~~--------~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      |+-+|.|+|+|.+|...   ..+++.  .....++.+|.++++.+..        ..++.+.-+...   .+..+.+   
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~---td~~eaL---   74 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT---MNLDDVI---   74 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE---SCHHHHH---
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe---CChhhcc---
Confidence            45689999999998542   223332  2234899999999876532        234433322211   1222222   


Q ss_pred             HHhhCCCCcEEEEcCCChH
Q 017793          250 QNAMGSGIDVSFDCVGFDK  268 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~  268 (366)
                           .++|+|+.+++.+.
T Consensus        75 -----~dad~Vv~~~~~g~   88 (171)
T d1obba1          75 -----IDADFVINTAMVGG   88 (171)
T ss_dssp             -----TTCSEEEECCCTTH
T ss_pred             -----cCCCeEeeeccccc
Confidence                 57999999988653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=85.07  E-value=1.4  Score=36.87  Aligned_cols=35  Identities=20%  Similarity=0.090  Sum_probs=25.2

Q ss_pred             CCEEEEECCC---HHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          184 ETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       184 ~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      ++..||.|++   ++|.+..+.+...|+ .|+.+..+..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~   39 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPV   39 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchh
Confidence            3556888843   899998888888999 5666655544

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.92  E-value=0.66  Score=32.78  Aligned_cols=33  Identities=9%  Similarity=0.107  Sum_probs=27.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      .+++++|+|+|.+|.=.+++++.+|.+ |..+.+
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~-Vtii~~   51 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGLD-VTVMVR   51 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCCe-EEEEEe
Confidence            457899999999999999999999995 444444

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.88  E-value=0.84  Score=32.31  Aligned_cols=34  Identities=18%  Similarity=0.182  Sum_probs=28.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      ..+++|+|+|.+|.=.++.++.+|. .|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4789999999999999999999999 677776543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.83  E-value=0.48  Score=39.43  Aligned_cols=33  Identities=24%  Similarity=0.506  Sum_probs=27.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      .|+|+|||..|++++..++..|. .+++.+..++
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            47889999999999999999999 5788876543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=84.77  E-value=1.8  Score=34.97  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=26.8

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .+|||.| +|-+|...+..+...|. .|++++++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCC
Confidence            6799998 69999999998888898 566665543

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=84.71  E-value=1.1  Score=36.23  Aligned_cols=102  Identities=16%  Similarity=0.184  Sum_probs=62.2

Q ss_pred             HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ++...+....+||=+|+|. |..+..++++.---++++++. ++-.+.+    ++.+....+.+..  .++..       
T Consensus        74 ~~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~--~d~~~-------  142 (256)
T d1qzza2          74 ADAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAE--GDFFK-------  142 (256)
T ss_dssp             HHTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE--CCTTS-------
T ss_pred             HhcCCCccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeee--eeccc-------
Confidence            3456677778999999876 889999999873337888886 4434333    3344322111111  11111       


Q ss_pred             hhCCCCcEEEEcC-----CCh---HHHHHHHHhhcCCceEEEEcc
Q 017793          252 AMGSGIDVSFDCV-----GFD---KTMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       252 ~~~~~~d~vld~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  288 (366)
                      ..+.++|+++-.-     +.+   ..+..+.+.|+|+|+++.+..
T Consensus       143 ~~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         143 PLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             CCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cccccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            1145688886432     212   346778889999999998763

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.66  E-value=4  Score=30.27  Aligned_cols=98  Identities=17%  Similarity=0.175  Sum_probs=60.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCeEEEE-cC--ChhHHHHHHHcCCc--------------------eeeecCCCCcc
Q 017793          186 NVMIMGSGPIGLVTLLAARAF-GAPRIIIT-DV--DVQRLSIARNLGAD--------------------ETAKVSTDIED  241 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v-~~--~~~~~~~~~~lg~~--------------------~~~~~~~~~~~  241 (366)
                      +|.|.|-|-+|.++...+... .. .++++ +.  +.+...++-++...                    .+..+....+ 
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~-~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p-   79 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDI-EVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP-   79 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG-
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCc-EEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCCh-
Confidence            688999999999988887744 45 45555 32  44667777654321                    0111111111 


Q ss_pred             hHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       242 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                        +.+.+-    ..++|+|+||.|.-...+.+..+|..+.+-+.+..+..
T Consensus        80 --~~i~W~----~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~k  123 (166)
T d2b4ro1          80 --SQIPWG----KCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK  123 (166)
T ss_dssp             --GGCCHH----HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             --HHcccc----ccCCCEEEEecccccchhhhhhhhccCCCEEEEecccc
Confidence              111111    23799999999986666778888988877777765443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.59  E-value=0.53  Score=33.34  Aligned_cols=36  Identities=17%  Similarity=0.315  Sum_probs=30.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      +.+++++|+|+|.+|+=.++.++.+|. .|-.+.+++
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEcc
Confidence            346899999999999999999999998 677776554

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.43  E-value=1  Score=34.32  Aligned_cols=88  Identities=24%  Similarity=0.258  Sum_probs=55.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.++.|+|.|.+|....++++..|. +|++.++...+... ...+...        .++.+    +.    ...|+|.-
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~e----ll----~~sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLDD----LL----ARADFISV  104 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHHH----HH----HHCSEEEE
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHHH----HH----hhCCEEEE
Confidence            47789999999999999999999999 78888776554333 3333321        12222    22    23688876


Q ss_pred             cCCC-hHH---H-HHHHHhhcCCceEEEEcc
Q 017793          263 CVGF-DKT---M-STALNATRPGGKVCLIGL  288 (366)
Q Consensus       263 ~~g~-~~~---~-~~~~~~l~~~G~~v~~g~  288 (366)
                      +.+- +++   + ...++.|+++..++-++.
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             cCCCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            6543 211   1 245567777776665543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.39  E-value=2.2  Score=35.75  Aligned_cols=30  Identities=27%  Similarity=0.419  Sum_probs=24.5

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEc
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITD  215 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~  215 (366)
                      ..|||.| +|-+|...+..+...|. .|++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d   32 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVAD   32 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEE
Confidence            3689998 69999998888888898 677774

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.33  E-value=3.1  Score=31.24  Aligned_cols=86  Identities=14%  Similarity=0.065  Sum_probs=44.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC--hhHHHHHHHcCCceeee--cCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIARNLGADETAK--VSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~~~lg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      +|.|+|+|..|.+....+...|- .|....+.  ++..+.+.+-.-.....  .....-.....+.+.    -...|+++
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~ad~Ii   76 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC----LENAEVVL   76 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH----HTTCSEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHH----Hhccchhh
Confidence            68899999999887777766676 56666443  23333333221110000  000000111222222    24689999


Q ss_pred             EcCCChHHHHHHHHhh
Q 017793          262 DCVGFDKTMSTALNAT  277 (366)
Q Consensus       262 d~~g~~~~~~~~~~~l  277 (366)
                      .++... .+...++.+
T Consensus        77 ~avps~-~~~~~~~~l   91 (180)
T d1txga2          77 LGVSTD-GVLPVMSRI   91 (180)
T ss_dssp             ECSCGG-GHHHHHHHH
T ss_pred             cccchh-hhHHHHHhh
Confidence            999976 344444443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.27  E-value=2.2  Score=30.18  Aligned_cols=60  Identities=17%  Similarity=0.313  Sum_probs=46.5

Q ss_pred             HHHhCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeee
Q 017793          175 ACRRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  234 (366)
Q Consensus       175 ~l~~~~~~~~~~vlI~-G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  234 (366)
                      .++.++++.-+.+++. ..-..-+.+.++++..|..++++...+++..+.++++|++.+++
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~  117 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVS  117 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEEC
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEEC
Confidence            4566777776666554 33455678888999999888888888888899999999998775

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.16  E-value=0.39  Score=39.27  Aligned_cols=31  Identities=26%  Similarity=0.447  Sum_probs=26.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      +|+|+|+|..|+.+...+...|. +|.+++.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            58999999999999988888899 68888764

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.10  E-value=0.49  Score=36.98  Aligned_cols=30  Identities=17%  Similarity=0.464  Sum_probs=26.2

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      |+|+|+|+.|+.|...|..+|. +|+.++.+
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7889999999999999999999 68888754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=83.98  E-value=1.3  Score=37.15  Aligned_cols=74  Identities=16%  Similarity=0.036  Sum_probs=42.7

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC-CCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFDC  263 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~  263 (366)
                      +|||.| +|-+|...++.+...|...|++++....+...+.+..--..+..+ ++..++   .+...    .++|+|+.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~---~~~~~----~~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW---IEYHV----KKCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHH---HHHHH----HHCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHH---HHHHH----hCCCccccc
Confidence            699998 699999988877777744788887765544332221111122111 111222   22221    359999998


Q ss_pred             CCC
Q 017793          264 VGF  266 (366)
Q Consensus       264 ~g~  266 (366)
                      .+.
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            764

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.98  E-value=4.9  Score=29.16  Aligned_cols=44  Identities=14%  Similarity=0.147  Sum_probs=29.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  229 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  229 (366)
                      ++|-++|.|.+|...+.-+...|. .++.-+..++..+++++.+.
T Consensus         1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~~~~~~~~~~~~~~~~~~   44 (156)
T d2cvza2           1 EKVAFIGLGAMGYPMAGHLARRFP-TLVWNRTFEKALRHQEEFGS   44 (156)
T ss_dssp             CCEEEECCSTTHHHHHHHHHTTSC-EEEECSSTHHHHHHHHHHCC
T ss_pred             CeEEEEeHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHcCC
Confidence            578899999999776665555666 56655555555566665543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.78  E-value=0.59  Score=37.15  Aligned_cols=35  Identities=23%  Similarity=0.462  Sum_probs=28.3

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR  220 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~  220 (366)
                      .++||.| ++++|.+.++.+...|+ .|+.+++++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            4678888 68999998888888899 68888777654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=83.72  E-value=0.49  Score=40.50  Aligned_cols=31  Identities=19%  Similarity=0.269  Sum_probs=25.8

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      +|||.| +|-+|...+..+...|..++++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            699998 6999999888887788877777764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.66  E-value=1.2  Score=37.23  Aligned_cols=32  Identities=16%  Similarity=-0.022  Sum_probs=27.0

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      .++||.| +|-+|...+..+...|. .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            4789998 69999999999988999 68888763

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.53  E-value=0.59  Score=36.45  Aligned_cols=30  Identities=27%  Similarity=0.631  Sum_probs=25.8

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      |+|+|+|+.|+.|...|.+.|. +|+.++..
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            6788999999999999999999 67777654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=83.49  E-value=2.1  Score=36.15  Aligned_cols=32  Identities=16%  Similarity=0.032  Sum_probs=26.0

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ..|||.| +|-+|...+..+...|. .|+++++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECC
Confidence            4678998 69999998888888898 78888764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=83.23  E-value=2.7  Score=35.18  Aligned_cols=36  Identities=17%  Similarity=0.300  Sum_probs=27.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ  219 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~  219 (366)
                      ...+|||.| +|.+|...+..+...|.+ |+++.++.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe-EEEEECCcc
Confidence            457899998 699999999888888995 555555443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.14  E-value=6.3  Score=28.24  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=28.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHH
Q 017793          186 NVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRL  221 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~  221 (366)
                      +|.|+|+|.+|......+...+ ++.++.++.++++.
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~   38 (142)
T d1ojua1           2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLA   38 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchh
Confidence            6788999999988777666555 56799999888764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=83.10  E-value=4.3  Score=30.12  Aligned_cols=75  Identities=17%  Similarity=0.237  Sum_probs=43.6

Q ss_pred             CCCEEEEECCCHHHHH--HHHHHHHC-C--CCeEEEEcCChhHHHHH--------HHcCCceeeecCCCCcchHHHHHHH
Q 017793          183 PETNVMIMGSGPIGLV--TLLAARAF-G--APRIIITDVDVQRLSIA--------RNLGADETAKVSTDIEDVDTDVGKI  249 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~--ai~la~~~-g--~~~vv~v~~~~~~~~~~--------~~lg~~~~~~~~~~~~~~~~~~~~~  249 (366)
                      +.-+|.|+|+|++|..  ...+++.. .  ...++-+|.++++.+..        ..++.+..+...+   +..+.+   
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~eal---   75 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT---DPEEAF---   75 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES---CHHHHH---
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC---Chhhcc---
Confidence            4457899998877633  33444332 2  23799999999886532        2234432222212   222222   


Q ss_pred             HHhhCCCCcEEEEcCCChH
Q 017793          250 QNAMGSGIDVSFDCVGFDK  268 (366)
Q Consensus       250 ~~~~~~~~d~vld~~g~~~  268 (366)
                           .++|+|+.++|.+.
T Consensus        76 -----~~AD~Vvitag~~~   89 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVGK   89 (167)
T ss_dssp             -----SSCSEEEECCCTTH
T ss_pred             -----CCCCEEEECCCcCC
Confidence                 58999999998653

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.06  E-value=0.55  Score=36.80  Aligned_cols=31  Identities=26%  Similarity=0.577  Sum_probs=26.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      .++|+|+|+.|+.+...|..+|. +|+.++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            37889999999999999999999 68888754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.03  E-value=0.61  Score=36.67  Aligned_cols=31  Identities=29%  Similarity=0.504  Sum_probs=25.1

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      |+|+|+|+.|+.|...|...|. +|+.++..+
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            7889999999988777778899 677776543

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.94  E-value=0.65  Score=36.65  Aligned_cols=31  Identities=29%  Similarity=0.487  Sum_probs=26.7

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      |+|+|+|+.|+.|...+...|. +|+.++..+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            7888999999999999999999 688887544

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=82.71  E-value=4.9  Score=33.65  Aligned_cols=102  Identities=16%  Similarity=0.234  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCHHHHHHHH-HHHHCCCCeEEEEcCChhHHH-HHHHcCCc---eeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLL-AARAFGAPRIIITDVDVQRLS-IARNLGAD---ETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~-la~~~g~~~vv~v~~~~~~~~-~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +...++.|+|+|..+.+-++ ++...+.++|.+.++++++.+ +++++...   .+...    .+..+.+        .+
T Consensus       126 ~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~----~s~~eav--------~~  193 (340)
T d1x7da_         126 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA----SSVAEAV--------KG  193 (340)
T ss_dssp             TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC----SSHHHHH--------TT
T ss_pred             cCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec----CCHHHHH--------hc
Confidence            45678899999988876665 445678888999999877654 55555322   11111    2333322        57


Q ss_pred             CcEEEEcCCChH---HHHHHHHhhcCCceEEEEcccCC-Cceeec
Q 017793          257 IDVSFDCVGFDK---TMSTALNATRPGGKVCLIGLAKT-EMTVAL  297 (366)
Q Consensus       257 ~d~vld~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~  297 (366)
                      .|+++-|..++.   .+.  .+.++++-++..+|...+ ..+++.
T Consensus       194 ADIi~t~Tas~s~~Pv~~--~~~l~pG~hI~aiGs~~p~~~Eld~  236 (340)
T d1x7da_         194 VDIITTVTADKAYATIIT--PDMLEPGMHLNAVGGDCPGKTELHA  236 (340)
T ss_dssp             CSEEEECCCCSSEEEEEC--GGGCCTTCEEEECSCCBTTBEEECH
T ss_pred             CCceeeccccCCCCcccc--hhhcCCCCEEeecccchhhhhccCH
Confidence            899998775431   111  257899999889886543 344444

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.12  E-value=0.67  Score=35.48  Aligned_cols=31  Identities=23%  Similarity=0.323  Sum_probs=25.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      .+|+|+|+|+.|+.|...+.+.|. ++++++.
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~   36 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEG   36 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEe
Confidence            579999999999998888888899 5666653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.02  E-value=0.56  Score=38.95  Aligned_cols=32  Identities=19%  Similarity=0.419  Sum_probs=27.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      .++|+|||..|+.++..+...|. .|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999988888898 688887654

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=82.00  E-value=4.6  Score=30.45  Aligned_cols=104  Identities=18%  Similarity=0.230  Sum_probs=62.8

Q ss_pred             hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          178 RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       178 ~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      ....++|..+ |-+ .|.=|+ +-.+++. +. +|+++|.+++..+.++++-.+....++..-.++.+.+..   ..-..
T Consensus        13 ~l~~~~g~~~-vD~T~G~GGh-s~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~---~~~~~   85 (182)
T d1wg8a2          13 LLAVRPGGVY-VDATLGGAGH-ARGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAA---LGVER   85 (182)
T ss_dssp             HHTCCTTCEE-EETTCTTSHH-HHHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHH---TTCSC
T ss_pred             hcCCCCCCEE-EEeCCCCcHH-HHHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHH---cCCCc
Confidence            3457788864 544 344344 4455554 44 899999999999888876544433333333333333322   23456


Q ss_pred             CcEEEEcCCChH---------------HHHHHHHhhcCCceEEEEcc
Q 017793          257 IDVSFDCVGFDK---------------TMSTALNATRPGGKVCLIGL  288 (366)
Q Consensus       257 ~d~vld~~g~~~---------------~~~~~~~~l~~~G~~v~~g~  288 (366)
                      +|.|+=-.|-..               .+....+.++++|+++.+..
T Consensus        86 vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~f  132 (182)
T d1wg8a2          86 VDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAF  132 (182)
T ss_dssp             EEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEec
Confidence            888765445421               35667788899998877643

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.91  E-value=1.5  Score=34.77  Aligned_cols=33  Identities=18%  Similarity=0.443  Sum_probs=27.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHH-HHCCCCeEEEEc
Q 017793          182 GPETNVMIMGSGPIGLVTLLAA-RAFGAPRIIITD  215 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la-~~~g~~~vv~v~  215 (366)
                      -++.+|+|.|.|.+|..+.+.+ +..|+ ++++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            3588999999999999988877 56799 676664

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.84  E-value=0.48  Score=38.82  Aligned_cols=32  Identities=22%  Similarity=0.456  Sum_probs=25.2

Q ss_pred             EEEEECCCHHHHHHH-HHHHHCCCCeEEEEcCCh
Q 017793          186 NVMIMGSGPIGLVTL-LAARAFGAPRIIITDVDV  218 (366)
Q Consensus       186 ~vlI~G~g~vG~~ai-~la~~~g~~~vv~v~~~~  218 (366)
                      -|+|+|+|+.|+++. .+|+..|. +|.+++..+
T Consensus        35 DViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV   67 (278)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHccCC-eEEEEecCC
Confidence            389999999998765 56666799 688887654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=81.60  E-value=3  Score=30.95  Aligned_cols=84  Identities=18%  Similarity=0.204  Sum_probs=55.9

Q ss_pred             HHHHhCCCC-CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793          174 HACRRANVG-PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  251 (366)
Q Consensus       174 ~~l~~~~~~-~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  251 (366)
                      ..++..++. .|.+++|.| +.-+|.-...++...|+ .|..+.+..                     .+..+.+     
T Consensus        26 ~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t---------------------~~l~~~~-----   78 (166)
T d1b0aa1          26 TLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT---------------------KNLRHHV-----   78 (166)
T ss_dssp             HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC---------------------SCHHHHH-----
T ss_pred             HHHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc---------------------chhHHHH-----
Confidence            334555543 689999999 67899999999998999 566554322                     1222221     


Q ss_pred             hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc
Q 017793          252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                         ..+|+++-++|.+..+.  -+.++++..++.+|..
T Consensus        79 ---~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          79 ---ENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ---HHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             ---hhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence               24788888888764332  2467888888888754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.54  E-value=1  Score=38.24  Aligned_cols=75  Identities=19%  Similarity=0.226  Sum_probs=44.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793          183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  261 (366)
Q Consensus       183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  261 (366)
                      .+-+|||.| +|-+|...+..+...|. .|+++++.+.... ............  +..+.....+ .    -.++|.|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~-~~~~~~~~~~~~--D~~~~~~~~~-~----~~~~d~Vi   84 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHM-TEDMFCDEFHLV--DLRVMENCLK-V----TEGVDHVF   84 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSS-CGGGTCSEEEEC--CTTSHHHHHH-H----HTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccch-hhhcccCcEEEe--echhHHHHHH-H----hhcCCeEe
Confidence            367899998 69999999999888898 6777765432211 111222222221  2223322222 2    24799999


Q ss_pred             EcCCC
Q 017793          262 DCVGF  266 (366)
Q Consensus       262 d~~g~  266 (366)
                      .+.+.
T Consensus        85 h~a~~   89 (363)
T d2c5aa1          85 NLAAD   89 (363)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            87743

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=81.53  E-value=1.1  Score=33.53  Aligned_cols=28  Identities=32%  Similarity=0.472  Sum_probs=24.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCe
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPR  210 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~  210 (366)
                      .+++|+|+|+|.+|.-++..++..|.+.
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v   29 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEG   29 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCS
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCce
Confidence            5789999999999999999999999854

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.45  E-value=0.69  Score=36.11  Aligned_cols=30  Identities=23%  Similarity=0.557  Sum_probs=25.5

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      |+|+|+|+.|+.|...|...|. +|+.++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999989988999 67887653

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=81.32  E-value=6.5  Score=27.15  Aligned_cols=89  Identities=21%  Similarity=0.207  Sum_probs=55.8

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          181 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       181 ~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +.+..+|||.| +|.-|.+..+..+.+|-+.|.++...+.-.+.   +|. .+  |+    ...+.+++      .++|.
T Consensus         3 i~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~---~gi-PV--f~----sV~eAv~~------~~~~~   66 (119)
T d2nu7a1           3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTH---LGL-PV--FN----TVREAVAA------TGATA   66 (119)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEE---TTE-EE--ES----SHHHHHHH------HCCCE
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCccc---CCC-ch--hh----HHHHHHHH------hCCCe
Confidence            45678999999 89999999999999998667777654432211   221 12  21    22222222      24667


Q ss_pred             EEEcCCChHHHHHHHHhhcCCceEEE
Q 017793          260 SFDCVGFDKTMSTALNATRPGGKVCL  285 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~~G~~v~  285 (366)
                      .+-.++.+...+..++.+..+=+++.
T Consensus        67 SvIfVPp~~a~dA~~EAi~agI~~iV   92 (119)
T d2nu7a1          67 SVIYVPAPFCKDSILEAIDAGIKLII   92 (119)
T ss_dssp             EEECCCGGGHHHHHHHHHHTTCSEEE
T ss_pred             EEEeccHHHHHHHHHHHHHCCCCEEE
Confidence            77777766667777777766655443

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.17  E-value=1.1  Score=37.49  Aligned_cols=94  Identities=17%  Similarity=0.169  Sum_probs=60.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793          182 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  256 (366)
Q Consensus       182 ~~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (366)
                      +...++.|+|+|..+..-++.+. ....++|.+.++++++.+.+    +..+.....+       ..+.        -.+
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~-------~~~a--------~~~  187 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ-------PAEE--------ASR  187 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC-------CHHH--------HTS
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc-------hhhh--------hcc
Confidence            45578899999988877665555 46788899998888876533    2333332211       1111        146


Q ss_pred             CcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793          257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  291 (366)
Q Consensus       257 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (366)
                      .|+|+.|.....-+- -.+.+++|-++..+|...+
T Consensus       188 aDiV~taT~s~~P~~-~~~~l~~G~hv~~iGs~~p  221 (320)
T d1omoa_         188 CDVLVTTTPSRKPVV-KAEWVEEGTHINAIGADGP  221 (320)
T ss_dssp             SSEEEECCCCSSCCB-CGGGCCTTCEEEECSCCST
T ss_pred             ccEEEEeccCccccc-chhhcCCCCeEeecCCccc
Confidence            999999887642211 1256899999999986544

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=80.96  E-value=3.8  Score=28.45  Aligned_cols=90  Identities=21%  Similarity=0.272  Sum_probs=58.8

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793          181 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  259 (366)
Q Consensus       181 ~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  259 (366)
                      +.+..+|+|.| +|.-|.+..+.++.+|-+.|.++...+.-.+.   .|. .+  |+    ...+++    +  ..++|.
T Consensus         4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~---~gi-PV--f~----tV~eAv----~--~~~~d~   67 (121)
T d1oi7a1           4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEV---LGV-PV--YD----TVKEAV----A--HHEVDA   67 (121)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE---TTE-EE--ES----SHHHHH----H--HSCCSE
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEE---ECC-ch--Hh----hHHHHH----H--hcCCeE
Confidence            45678999999 89999999999999998667777554432211   121 12  22    222222    2  135788


Q ss_pred             EEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793          260 SFDCVGFDKTMSTALNATRPGGKVCLI  286 (366)
Q Consensus       260 vld~~g~~~~~~~~~~~l~~~G~~v~~  286 (366)
                      .+-.++.+...+.+++.+..+=+++.+
T Consensus        68 SvIfVPp~~a~dAi~EAi~agI~liv~   94 (121)
T d1oi7a1          68 SIIFVPAPAAADAALEAAHAGIPLIVL   94 (121)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             EEEeeCHHHHHHHHHHHHhCCCcEEEE
Confidence            888888776777788888777665543

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.95  E-value=7.1  Score=27.38  Aligned_cols=39  Identities=23%  Similarity=0.220  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793          180 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV  218 (366)
Q Consensus       180 ~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~  218 (366)
                      -+.+..+|+|.| +|.-|.+..+.++.+|-+.|.++...+
T Consensus        11 li~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgK   50 (130)
T d1euca1          11 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGK   50 (130)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred             EEcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCC
Confidence            367788999999 899999999999999986666775544

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.88  E-value=4.8  Score=29.92  Aligned_cols=85  Identities=15%  Similarity=0.127  Sum_probs=55.7

Q ss_pred             HHHHHhCCCC-CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793          173 VHACRRANVG-PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  250 (366)
Q Consensus       173 ~~~l~~~~~~-~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  250 (366)
                      +..+++.++. .|.+++|.| +.-+|.-...++...|+ .|..+.+.....                     .+    . 
T Consensus        27 i~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~l---------------------~~----~-   79 (170)
T d1a4ia1          27 LELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAHL---------------------DE----E-   79 (170)
T ss_dssp             HHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSSH---------------------HH----H-
T ss_pred             HHHHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccccH---------------------HH----H-
Confidence            3345666554 689999999 67899998889888898 566664322221                     11    1 


Q ss_pred             HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc
Q 017793          251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  289 (366)
Q Consensus       251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  289 (366)
                         -+.+|+++-++|.+..+.  -+.++++-.++.+|..
T Consensus        80 ---~~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          80 ---VNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ---HTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             ---Hhhccchhhccccccccc--cccccCCCeEeccCcc
Confidence               135788888888664322  2567788877777753

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.77  E-value=0.87  Score=35.47  Aligned_cols=30  Identities=27%  Similarity=0.513  Sum_probs=25.8

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793          187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  217 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~  217 (366)
                      ++|+|+|+.|+.|...|...|. +|+.++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6788999999999999999999 67777653

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.76  E-value=2.2  Score=33.98  Aligned_cols=32  Identities=19%  Similarity=0.362  Sum_probs=26.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHH-HCCCCeEEEEc
Q 017793          183 PETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITD  215 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~  215 (366)
                      .|.+|+|.|.|.+|..+.+++. ..|+ +|+++.
T Consensus        31 ~g~~v~IqGfGnVG~~~a~~L~~~~G~-kvv~vs   63 (239)
T d1gtma1          31 KGKTIAIQGYGNAGYYLAKIMSEDFGM-KVVAVS   63 (239)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhcCc-ceeecc
Confidence            6899999999999999998775 5688 666663

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.74  E-value=0.66  Score=38.63  Aligned_cols=31  Identities=19%  Similarity=0.270  Sum_probs=25.7

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  216 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~  216 (366)
                      .+|||.| +|-+|...+..+...|. .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            5799998 69999998888887898 6777754

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=80.38  E-value=0.68  Score=38.90  Aligned_cols=31  Identities=29%  Similarity=0.494  Sum_probs=23.7

Q ss_pred             EEEECCCHHHHHHHHHH-----HHCCCCeEEEEcCCh
Q 017793          187 VMIMGSGPIGLVTLLAA-----RAFGAPRIIITDVDV  218 (366)
Q Consensus       187 vlI~G~g~vG~~ai~la-----~~~g~~~vv~v~~~~  218 (366)
                      |+|.|+|++|+++.+++     +..|. +|+++++.+
T Consensus        10 V~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            89999999998866665     35688 578887543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.18  E-value=3  Score=34.77  Aligned_cols=30  Identities=30%  Similarity=0.441  Sum_probs=25.1

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEc
Q 017793          185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITD  215 (366)
Q Consensus       185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~  215 (366)
                      ++|||.| +|-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            5899998 69999998888888898 577764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.10  E-value=1.3  Score=33.77  Aligned_cols=85  Identities=18%  Similarity=0.210  Sum_probs=52.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793          183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  262 (366)
Q Consensus       183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  262 (366)
                      .+.+|.|+|.|.+|....++++..|+ +|++.+......       .+....+    .++    .++.    ...|++.-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~----~~l----~ell----~~sDii~i  102 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQV----QHL----SDLL----NMSDVVSL  102 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEEC----SCH----HHHH----HHCSEEEE
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhh----hhH----HHHH----hhccceee
Confidence            47899999999999999999999999 788887543211       1111111    122    2232    13678877


Q ss_pred             cCCC-hHH----HHHHHHhhcCCceEEEEc
Q 017793          263 CVGF-DKT----MSTALNATRPGGKVCLIG  287 (366)
Q Consensus       263 ~~g~-~~~----~~~~~~~l~~~G~~v~~g  287 (366)
                      +.+- +++    -...++.|+++..++-++
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~a  132 (188)
T d1sc6a1         103 HVPENPSTKNMMGAKEISLMKPGSLLINAS  132 (188)
T ss_dssp             CCCSSTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred             cccCCcchhhhccHHHHhhCCCCCEEEEcC
Confidence            6542 211    124567778877776654