Citrus Sinensis ID: 017881


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360----
MSQKSPSQKKKYRAGVFGDIYSVMMLPKELEIEKDVSVSVPSPLELRSQLPDFKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKPGPI
cccccHHHHHccccccHHHHHHHHccccccccccccccccccHHHHHHccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHcHHHHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccHHHHHHHccHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccHHHHcccccHHHHHHHHHHHHHHHcccccccc
cccccccccccccccHHHHHHHHHHHcccHHHHcccccccHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHEHccccHHHHHHcHHHHHHHHHHHHHHHHHHccccccc
msqkspsqkkkyragvfgdiysvmmlpkeleiekdvsvsvpsplelrsqlpDFKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWqglwagnginmlriiptqaielgTFECVKRAMTTAQEkwsqeecpkvqigplslsfslswispVAVAGAAAGVVSTLachplevlkdrltvshdvypsLSIAISKIYKeggigafyagisptligmlpystCYYFMYETLKKKYcnsknkrslnrpeMLALGALAGFTASTISFPLEVARKRLMVGalqgkcppHMAAALAEVIREEGLMglyrgwgasclkvmpssgitWMFYEAWKDillplkpgpi
msqkspsqkkkyragvfgdIYSVMMLPKELEIEKDVSVSVPSPLELRSQLPDFKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAqekwsqeecPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKPGPI
MSQKSPSQKKKYRAGVFGDIYSVMMLPKELEIEKDVSVSVPSPLELRSQLPDFKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPvavagaaagvvSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKPGPI
***********YRAGVFGDIYSVMMLPKELEIEKDVSV*******LRSQLPDFKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPL*****
**************GVFGDIYSVMMLPKELEIEKDVSVSVPSPLELRSQ**************REVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQE*********VQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYC*********RPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPL*****
***********YRAGVFGDIYSVMMLPKELEIEKDVSVSVPSPLELRSQLPDFKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMT************KVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKPGPI
**********KYRAGVFGDIYSVMMLPKELEIEKDVSVSVPSPLELRSQLPDFKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLK****
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MSQKSPSQKKKYRAGVFGDIYSVMMLPKELEIEKDVSVSVPSPLELRSQLPDFKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKPGPI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query364 2.2.26 [Sep-21-2011]
Q9LJX5348 Probable mitochondrial ad yes no 0.936 0.979 0.710 1e-141
Q9SUV1392 Adenine nucleotide transp no no 0.755 0.701 0.412 9e-59
P29518436 Adenine nucleotide transp N/A no 0.75 0.626 0.403 2e-52
O18757475 Calcium-binding mitochond yes no 0.739 0.566 0.334 3e-35
A5PJZ1477 Calcium-binding mitochond yes no 0.739 0.563 0.332 3e-35
Q6NUK1477 Calcium-binding mitochond yes no 0.739 0.563 0.325 2e-34
Q8BMD8475 Calcium-binding mitochond yes no 0.741 0.568 0.318 2e-34
Q12251326 Uncharacterized mitochond yes no 0.780 0.871 0.280 3e-33
A2CEQ0469 Calcium-binding mitochond yes no 0.730 0.567 0.308 4e-33
Q0V7M4469 Calcium-binding mitochond no no 0.725 0.562 0.299 2e-32
>sp|Q9LJX5|BRTL1_ARATH Probable mitochondrial adenine nucleotide transporter BTL1 OS=Arabidopsis thaliana GN=At3g20240 PE=2 SV=1 Back     alignment and function desciption
 Score =  503 bits (1294), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/345 (71%), Positives = 289/345 (83%), Gaps = 4/345 (1%)

Query: 24  MMLPKE----LEIEKDVSVSVPSPLELRSQLPDFKAAFQDFMKVREVREFLSGALAGAMT 79
           M++PKE    ++ E   S S  S L L+   PDF    +DF K RE REFLSGALAGAMT
Sbjct: 3   MVVPKEGLVVMDKESVSSASSDSHLRLQPHFPDFTIPVKDFFKSREAREFLSGALAGAMT 62

Query: 80  KAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGT 139
           KAVLAPLETIRTRM+VGVGS++I GSF+EV+++QGWQGLWAGN INM+RIIPTQAIELGT
Sbjct: 63  KAVLAPLETIRTRMIVGVGSRSIPGSFLEVVQKQGWQGLWAGNEINMIRIIPTQAIELGT 122

Query: 140 FECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEV 199
           FE VKRAMT+AQ K  + E  K++IG  S S S+SWISPVAVAGA+AG+ STL CHPLEV
Sbjct: 123 FEWVKRAMTSAQVKLKKIEDAKIEIGDFSFSPSISWISPVAVAGASAGIASTLVCHPLEV 182

Query: 200 LKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKY 259
           LKDRLTVS ++YPSLS+AI +I++  GI  FYAG+ PTL+GMLPYSTCYYFMY+ +K  Y
Sbjct: 183 LKDRLTVSPEIYPSLSLAIPRIFRADGIRGFYAGLGPTLVGMLPYSTCYYFMYDKMKTSY 242

Query: 260 CNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVI 319
           C SKNK++L+RPEML LGALAG TASTISFPLEVARKRLMVGAL+G+CPP+MAAA+AEV+
Sbjct: 243 CKSKNKKALSRPEMLVLGALAGLTASTISFPLEVARKRLMVGALKGECPPNMAAAIAEVV 302

Query: 320 REEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKPGPI 364
           ++EG+MGLYRGWGASCLKVMPSSGITW+FYEAWKDILL     P+
Sbjct: 303 KKEGVMGLYRGWGASCLKVMPSSGITWVFYEAWKDILLAANTKPL 347




Probable mitochondrial adenylate carrier that catalyzes the transport of ATP, ADP and AMP.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SUV1|BRT1_ARATH Adenine nucleotide transporter BT1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1 Back     alignment and function description
>sp|P29518|BT1_MAIZE Adenine nucleotide transporter BT1, chloroplastic/amyloplastic/mitochondrial OS=Zea mays GN=BT1 PE=1 SV=1 Back     alignment and function description
>sp|O18757|SCMC1_RABIT Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1 Back     alignment and function description
>sp|A5PJZ1|SCMC1_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1 Back     alignment and function description
>sp|Q6NUK1|SCMC1_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2 Back     alignment and function description
>sp|Q8BMD8|SCMC1_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q12251|YP011_YEAST Uncharacterized mitochondrial carrier YPR011C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR011C PE=1 SV=1 Back     alignment and function description
>sp|A2CEQ0|SCM2B_DANRE Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2 Back     alignment and function description
>sp|Q0V7M4|SCMC2_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query364
118488459365 unknown [Populus trichocarpa] 0.964 0.961 0.816 1e-169
225443377356 PREDICTED: protein brittle-1, chloroplas 0.961 0.983 0.823 1e-167
147790081356 hypothetical protein VITISV_024610 [Viti 0.961 0.983 0.820 1e-167
224100481342 predicted protein [Populus trichocarpa] 0.906 0.964 0.847 1e-166
359483221335 PREDICTED: protein brittle-1, chloroplas 0.903 0.982 0.838 1e-160
255544502375 Mitochondrial deoxynucleotide carrier, p 0.980 0.952 0.775 1e-155
356526346380 PREDICTED: protein brittle-1, chloroplas 0.969 0.928 0.741 1e-151
359807467381 uncharacterized protein LOC100795558 [Gl 0.972 0.929 0.725 1e-148
449447996381 PREDICTED: protein brittle-1, chloroplas 0.964 0.921 0.752 1e-146
297830712348 mitochondrial substrate carrier family p 0.936 0.979 0.710 1e-140
>gi|118488459|gb|ABK96044.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 298/365 (81%), Positives = 321/365 (87%), Gaps = 14/365 (3%)

Query: 1   MSQKSPSQKKKYRAGVFGDIYS--VMMLPKELEIEKDVSVSVPSP------LELRSQLPD 52
           M  ++ SQKKK   GV GD+     M+LPKEL    D  + +PSP       ELR QLPD
Sbjct: 1   MDFETESQKKK--CGVLGDVLGGVTMVLPKEL----DEPIPLPSPPTLAVPFELRFQLPD 54

Query: 53  FKAAFQDFMKVREVREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQ 112
            K A +DFM+ RE  EFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSF+EVIEQ
Sbjct: 55  LKLAVRDFMRSREAGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEVIEQ 114

Query: 113 QGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFS 172
           QGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMT+AQEKWSQ ECP+VQ+GPLSLSFS
Sbjct: 115 QGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTSAQEKWSQSECPRVQLGPLSLSFS 174

Query: 173 LSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYA 232
           LSWISPVAV GAAAG+ STLACHPLEVLKDRLTVS D+YP+LSIAISKIYK+GGIGAFYA
Sbjct: 175 LSWISPVAVGGAAAGIFSTLACHPLEVLKDRLTVSRDIYPTLSIAISKIYKDGGIGAFYA 234

Query: 233 GISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLE 292
           GISPTLIGMLPYSTCYYFMY+T+K  YC  KNK+SLNRPEML +GA +GFTAST+SFPLE
Sbjct: 235 GISPTLIGMLPYSTCYYFMYDTMKTSYCKGKNKKSLNRPEMLLIGAFSGFTASTLSFPLE 294

Query: 293 VARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAW 352
           VARKRLMVGALQGKCPPHMAAAL+EVIRE GLMGLYRGWGASCLKVMPSSGITWMFYEAW
Sbjct: 295 VARKRLMVGALQGKCPPHMAAALSEVIREGGLMGLYRGWGASCLKVMPSSGITWMFYEAW 354

Query: 353 KDILL 357
           KDILL
Sbjct: 355 KDILL 359




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443377|ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 1 [Vitis vinifera] gi|297735760|emb|CBI18447.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147790081|emb|CAN64851.1| hypothetical protein VITISV_024610 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224100481|ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359483221|ref|XP_003632922.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255544502|ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223547220|gb|EEF48715.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356526346|ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|359807467|ref|NP_001241139.1| uncharacterized protein LOC100795558 [Glycine max] gi|255648051|gb|ACU24481.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449447996|ref|XP_004141752.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like [Cucumis sativus] gi|449491783|ref|XP_004159002.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297830712|ref|XP_002883238.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297329078|gb|EFH59497.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query364
TAIR|locus:2087545348 AT3G20240 "AT3G20240" [Arabido 0.936 0.979 0.686 9.9e-126
TAIR|locus:2127851392 SHS1 "AT4G32400" [Arabidopsis 0.458 0.426 0.434 2.9e-54
ZFIN|ZDB-GENE-030131-3299321 slc25a16 "solute carrier famil 0.456 0.517 0.352 1.1e-31
UNIPROTKB|F1NH71300 SLC25A42 "Uncharacterized prot 0.771 0.936 0.298 5.4e-31
WB|WBGene00009666294 F43G9.3 [Caenorhabditis elegan 0.461 0.571 0.358 6.1e-31
RGD|1588586467 Slc25a23 "solute carrier famil 0.741 0.578 0.303 4.9e-30
UNIPROTKB|C8C417501 SLC25A25 "Solute carrier famil 0.733 0.532 0.302 3.7e-29
MGI|MGI:1914222467 Slc25a23 "solute carrier famil 0.442 0.344 0.329 5.3e-29
SGD|S000006215326 YPR011C "Putative transporter" 0.799 0.892 0.281 7.1e-29
UNIPROTKB|Q0V7M4469 SLC25A25 "Calcium-binding mito 0.733 0.569 0.299 9.5e-29
TAIR|locus:2087545 AT3G20240 "AT3G20240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
 Identities = 237/345 (68%), Positives = 279/345 (80%)

Query:    24 MMLPKE----LEIEKDVSVSVPSPLELRSQLPDFKAAFQDFMKVREVREFLSGALAGAMT 79
             M++PKE    ++ E   S S  S L L+   PDF    +DF K RE REFLSGALAGAMT
Sbjct:     3 MVVPKEGLVVMDKESVSSASSDSHLRLQPHFPDFTIPVKDFFKSREAREFLSGALAGAMT 62

Query:    80 KAVLAPLETIRTRMVVGVGSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGT 139
             KAVLAPLETIRTRM+VGVGS++I GSF+EV+++QGWQGLWAGN INM+RIIPTQAIELGT
Sbjct:    63 KAVLAPLETIRTRMIVGVGSRSIPGSFLEVVQKQGWQGLWAGNEINMIRIIPTQAIELGT 122

Query:   140 FECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEV 199
             FE VKRAMT+AQ K  + E  K++IG  S S S+SWISP           STL CHPLEV
Sbjct:   123 FEWVKRAMTSAQVKLKKIEDAKIEIGDFSFSPSISWISPVAVAGASAGIASTLVCHPLEV 182

Query:   200 LKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKY 259
             LKDRLTVS ++YPSLS+AI +I++  GI  FYAG+ PTL+GMLPYSTCYYFMY+ +K  Y
Sbjct:   183 LKDRLTVSPEIYPSLSLAIPRIFRADGIRGFYAGLGPTLVGMLPYSTCYYFMYDKMKTSY 242

Query:   260 CNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALAEVI 319
             C SKNK++L+RPEML LGALAG TASTISFPLEVARKRLMVGAL+G+CPP+MAAA+AEV+
Sbjct:   243 CKSKNKKALSRPEMLVLGALAGLTASTISFPLEVARKRLMVGALKGECPPNMAAAIAEVV 302

Query:   320 REEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLKPGPI 364
             ++EG+MGLYRGWGASCLKVMPSSGITW+FYEAWKDILL     P+
Sbjct:   303 KKEGVMGLYRGWGASCLKVMPSSGITWVFYEAWKDILLAANTKPL 347




GO:0005215 "transporter activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2127851 SHS1 "AT4G32400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3299 slc25a16 "solute carrier family 25, member 16" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NH71 SLC25A42 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00009666 F43G9.3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
RGD|1588586 Slc25a23 "solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|C8C417 SLC25A25 "Solute carrier family 25 member 25" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1914222 Slc25a23 "solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
SGD|S000006215 YPR011C "Putative transporter" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|Q0V7M4 SLC25A25 "Calcium-binding mitochondrial carrier protein SCaMC-2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LJX5BRTL1_ARATHNo assigned EC number0.71010.93680.9798yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query364
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-20
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-18
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-17
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-10
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-08
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 83.1 bits (206), Expect = 6e-20
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 174 SWISPVA--VAGAAAGVVSTLACHPLEVLKDRL----TVSHDVYPSLSIAISKIYKEGGI 227
           S +S +A  +AG  AG ++    +PL+V+K RL          Y  +     KIYKE GI
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 228 GAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSK 263
              Y G+ P L+ + P +  Y+  YETLKK      
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 364
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.98
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.96
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.96
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.95
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.95
KOG0766297 consensus Predicted mitochondrial carrier protein 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.94
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.93
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.93
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.93
KOG1519297 consensus Predicted mitochondrial carrier protein 99.93
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.91
KOG2745321 consensus Mitochondrial carrier protein [General f 99.88
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.72
KOG2954427 consensus Mitochondrial carrier protein [General f 99.65
KOG1519297 consensus Predicted mitochondrial carrier protein 99.64
KOG2745321 consensus Mitochondrial carrier protein [General f 99.62
KOG2954427 consensus Mitochondrial carrier protein [General f 98.74
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=4.5e-61  Score=427.86  Aligned_cols=279  Identities=38%  Similarity=0.655  Sum_probs=248.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHcCC------CCCChHHHHHHHHHhhCcccccccchhhHHhhhhhhhhhH
Q 017881           64 REVREFLSGALAGAMTKAVLAPLETIRTRMVVGV------GSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQAIEL  137 (364)
Q Consensus        64 ~~~~~~~ag~~a~~~~~~~~~Pld~ik~r~Q~~~------~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~f  137 (364)
                      ..++.++||++||+++.+++.|||+||+|+|++.      .+.++.+++++|+++||++|||||+.++.++.+|+.+++|
T Consensus        26 ~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf  105 (320)
T KOG0752|consen   26 TGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQF  105 (320)
T ss_pred             HHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhh
Confidence            5789999999999999999999999999999974      3568899999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhhhhccccCCccccCCCcccccccchhHHHHHHhHHHHHHHhhcccHHHHHHHHhhcCC--CCCCHH
Q 017881          138 GTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHD--VYPSLS  215 (364)
Q Consensus       138 ~~y~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pld~vktr~q~~~~--~~~~~~  215 (364)
                      ..||.+|+......+.              .    .......++||++||+++++++||+|++|||+.++..  .|+++.
T Consensus       106 ~aye~~k~~~~~~~~~--------------~----~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~  167 (320)
T KOG0752|consen  106 SAYEQYKKLVLGVDPN--------------G----SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLL  167 (320)
T ss_pred             hHHHHhhhhhhccCcc--------------c----ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHH
Confidence            9999999863331110              0    1123345789999999999999999999999988766  499999


Q ss_pred             HHHHHHHHhcchhhcccchhHHHhhhhhhHHHHHHHHHHHHH-HHhcccCCCCCChhHHHHHHHHHHHhHhhhcccHHHH
Q 017881          216 IAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKK-KYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVA  294 (364)
Q Consensus       216 ~~~~~i~~~~G~~glyrG~~~~~~r~~~~~~~~~~~ye~~k~-~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~Pldvi  294 (364)
                      +++++|+++||++|||||+.|++++.+|+.++.|.+||.+|+ .+.+....++.+.+..+++|++||+++.+++||||+|
T Consensus       168 ~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~v  247 (320)
T KOG0752|consen  168 HAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTV  247 (320)
T ss_pred             HHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHH
Confidence            999999999999999999999999999999999999999999 5555444456677788999999999999999999999


Q ss_pred             HHHHHhcccc----CCCCCcHHHHHHHHHHhcChhhccccHHHHHhhHhhhHHHHHHHHHHHHHHhcCCC
Q 017881          295 RKRLMVGALQ----GKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLPLK  360 (364)
Q Consensus       295 ktr~q~~~~~----~~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~i~~~~ye~~k~~l~~~~  360 (364)
                      |+|||+....    ...+.+++||++.|+++||+.|||||+.|++++.+|+.++.|++||.+|+++...+
T Consensus       248 RrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~~~  317 (320)
T KOG0752|consen  248 RRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRLLK  317 (320)
T ss_pred             HHHHhccCccccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhccc
Confidence            9999998753    23467999999999999999999999999999999999999999999998876554



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query364
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 9e-15
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 5e-05
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-06
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 65/305 (21%), Positives = 131/305 (42%), Gaps = 40/305 (13%) Query: 66 VREFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGS---------FIEVIEQQGWQ 116 +++FL+G +A A++K +AP+E ++ + V SK IS + + ++QG+ Sbjct: 8 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67 Query: 117 GLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWI 176 W GN N++R PTQA+ + K+ ++ Q W Sbjct: 68 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQ-----------------FWR 110 Query: 177 SPXXXXXXXXXXXSTLAC--HPLEVLKDRLT------VSHDVYPSLSIAISKIYKEGGIG 228 +T C +PL+ + RL + + L I+KI+K G+ Sbjct: 111 YFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLR 170 Query: 229 AFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTIS 288 Y G + ++ G++ Y Y+ +Y+T K + KN + M+A A A +S Sbjct: 171 GLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHII-VSWMIAQTVTA--VAGLVS 227 Query: 289 FPLEVARKRLMVGALQGKCPPHMAAALA---EVIREEGLMGLYRGWGASCLKVMPSSGIT 345 +P + R+R+M+ + + + ++ ++EG ++G ++ L+ M + + Sbjct: 228 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVL 287 Query: 346 WMFYE 350 ++ E Sbjct: 288 VLYDE 292
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query364
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-81
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-36
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-14
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-12
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-39
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-21
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  248 bits (635), Expect = 7e-81
 Identities = 64/309 (20%), Positives = 131/309 (42%), Gaps = 37/309 (11%)

Query: 66  VREFLSGALAGAMTKAVLAPLETIRTRMVVGVGS---------KNISGSFIEVIEQQGWQ 116
           +++FL+G +A A++K  +AP+E ++  + V   S         K I    + + ++QG+ 
Sbjct: 8   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67

Query: 117 GLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWI 176
             W GN  N++R  PTQA+     +  K+      ++  Q                  + 
Sbjct: 68  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFW---------------RYF 112

Query: 177 SPVAVAGAAAGVVSTLACHPLEVLKDRLTV------SHDVYPSLSIAISKIYKEGGIGAF 230
           +    +G AAG  S    +PL+  + RL        +   +  L   I+KI+K  G+   
Sbjct: 113 AGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGL 172

Query: 231 YAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 290
           Y G + ++ G++ Y   Y+ +Y+T K    + KN   ++      +       A  +S+P
Sbjct: 173 YQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKN---VHIIVSWMIAQTVTAVAGLVSYP 229

Query: 291 LEVARKRLMVGALQGKCPPH---MAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWM 347
            +  R+R+M+ + +               ++ ++EG    ++G  ++ L+ M       +
Sbjct: 230 FDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLV 288

Query: 348 FYEAWKDIL 356
            Y+  K  +
Sbjct: 289 LYDEIKKFV 297


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query364
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=7.4e-57  Score=413.78  Aligned_cols=269  Identities=21%  Similarity=0.352  Sum_probs=241.9

Q ss_pred             HHHHHHHHHHHHHHHHhccHHHHHHHHHcCC------------CCCChHHHHHHHHHhhCcccccccchhhHHhhhhhhh
Q 017881           67 REFLSGALAGAMTKAVLAPLETIRTRMVVGV------------GSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQA  134 (364)
Q Consensus        67 ~~~~ag~~a~~~~~~~~~Pld~ik~r~Q~~~------------~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~  134 (364)
                      .++++|++||+++.+++||||+||+|+|++.            .++++.+++++|+++||++|||||+.+++++.+|..+
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~   82 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS   82 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999864            3678999999999999999999999999999999999


Q ss_pred             hhHhhHHHHHHHHHHHhhhhccccCCccccCCCcccccccchhHHHHHHhHHHHHHHhhcccHHHHHHHHhhcCC-----
Q 017881          135 IELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHD-----  209 (364)
Q Consensus       135 i~f~~y~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pld~vktr~q~~~~-----  209 (364)
                      ++|++||.+|+.+....             +      . ......+++|++||+++.++++|+|++|+|+|++..     
T Consensus        83 i~f~~ye~~k~~~~~~~-------------~------~-~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~  142 (303)
T 2lck_A           83 VRIGLYDSVKQFYTKGS-------------E------H-AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGR  142 (303)
T ss_dssp             HTTTHHHHHHHHHSCCC-------------S------S-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSS
T ss_pred             HHHHHHHHHHHHHhcCC-------------c------C-CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCC
Confidence            99999999999875310             0      0 123456799999999999999999999999999753     


Q ss_pred             CCCCHHHHHHHHHHhcchhhcccchhHHHhhhhhhHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHhHhhhcc
Q 017881          210 VYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISF  289 (364)
Q Consensus       210 ~~~~~~~~~~~i~~~~G~~glyrG~~~~~~r~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~  289 (364)
                      .|++.++++++|+++||++|||||+.+++++.+|+.+++|.+||.+|+.+.+... ...+....+++|++||++++++++
T Consensus       143 ~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~-~~~~~~~~~~~g~~ag~~~~~~~~  221 (303)
T 2lck_A          143 RYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL-MTDDLPCHFTSAFGAGFCTTVIAS  221 (303)
T ss_dssp             SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS-CCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCchHHHHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999999999999999998865432 234566779999999999999999


Q ss_pred             cHHHHHHHHHhccccCCCCCcHHHHHHHHHHhcChhhccccHHHHHhhHhhhHHHHHHHHHHHHHHhcC
Q 017881          290 PLEVARKRLMVGALQGKCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLP  358 (364)
Q Consensus       290 Pldviktr~q~~~~~~~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~i~~~~ye~~k~~l~~  358 (364)
                      |+||||+|||.+.  ...|.++++|+++++++||++|||||+.|+++|.+|.++++|.+||.+|+.+..
T Consensus       222 P~dvvktrlq~~~--~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          222 PVDVVKTRYMNSA--LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             HHHHHHHHHTTCC--SSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHHHHHHhcc--ccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            9999999999864  235999999999999999999999999999999999999999999999988754



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 364
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-26
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-10
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  104 bits (258), Expect = 4e-26
 Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 37/303 (12%)

Query: 66  VREFLSGALAGAMTKAVLAPLETIRTRMVVGVGS---------KNISGSFIEVIEQQGWQ 116
           +++FL+G +A A++K  +AP+E ++  + V   S         K I    + + ++QG+ 
Sbjct: 7   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 66

Query: 117 GLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWI 176
             W GN  N++R  PTQA+     +  K+      ++  Q                  + 
Sbjct: 67  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWR---------------YF 111

Query: 177 SPVAVAGAAAGVVSTLACHPLEVLKDRLTVS------HDVYPSLSIAISKIYKEGGIGAF 230
           +    +G AAG  S    +PL+  + RL            +  L   I+KI+K  G+   
Sbjct: 112 AGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGL 171

Query: 231 YAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFP 290
           Y G + ++ G++ Y   Y+ +Y+T K    + KN   +       +       A  +S+P
Sbjct: 172 YQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVS---WMIAQTVTAVAGLVSYP 228

Query: 291 LEVARKRLMVGALQGKCPPH---MAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWM 347
            +  R+R+M+ + +               ++ ++EG    ++G  ++ L+ M  +    +
Sbjct: 229 FDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGA-FVLV 287

Query: 348 FYE 350
            Y+
Sbjct: 288 LYD 290


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query364
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=7.9e-51  Score=369.66  Aligned_cols=270  Identities=22%  Similarity=0.416  Sum_probs=236.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHcCC---------CCCChHHHHHHHHHhhCcccccccchhhHHhhhhhhh
Q 017881           64 REVREFLSGALAGAMTKAVLAPLETIRTRMVVGV---------GSKNISGSFIEVIEQQGWQGLWAGNGINMLRIIPTQA  134 (364)
Q Consensus        64 ~~~~~~~ag~~a~~~~~~~~~Pld~ik~r~Q~~~---------~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~  134 (364)
                      +.+++|+||++|++++.+++||||+||+|+|+++         .++++.+++++++++||+++||||+.+.+++..+..+
T Consensus         5 ~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~   84 (292)
T d1okca_           5 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQA   84 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccc
Confidence            4678899999999999999999999999999852         3678999999999999999999999999999999999


Q ss_pred             hhHhhHHHHHHHHHHHhhhhccccCCccccCCCcccccccchhHHHHHHhHHHHHHHhhcccHHHHHHHHhhcCC-----
Q 017881          135 IELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPVAVAGAAAGVVSTLACHPLEVLKDRLTVSHD-----  209 (364)
Q Consensus       135 i~f~~y~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pld~vktr~q~~~~-----  209 (364)
                      ++|++||.+++.+......               ...........+++|.+||+++.++++|+|++|+|+|++..     
T Consensus        85 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~  149 (292)
T d1okca_          85 LNFAFKDKYKQIFLGGVDR---------------HKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQ  149 (292)
T ss_dssp             HHHHHHHHHHHHHHTTCCT---------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTT
T ss_pred             hhHHHHHHHHHHHhccccc---------------ccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccc
Confidence            9999999999988663211               01111224456789999999999999999999999999743     


Q ss_pred             -CCCCHHHHHHHHHHhcchhhcccchhHHHhhhhhhHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHHHhHhhhc
Q 017881          210 -VYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTIS  288 (364)
Q Consensus       210 -~~~~~~~~~~~i~~~~G~~glyrG~~~~~~r~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~  288 (364)
                       .+.+..+++++++++||+++||+|+.+++++++|+++++|.+||.+|+.+.+..   .......++++.++++++++++
T Consensus       150 ~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~a~~~t  226 (292)
T d1okca_         150 REFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK---NVHIIVSWMIAQTVTAVAGLVS  226 (292)
T ss_dssp             CSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG---CSCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccccc---ccchHHHHHHHHHHHHHHhhcc
Confidence             567899999999999999999999999999999999999999999998765433   3456677999999999999999


Q ss_pred             ccHHHHHHHHHhccccC---CCCCcHHHHHHHHHHhcChhhccccHHHHHhhHhhhHHHHHHHHHHH
Q 017881          289 FPLEVARKRLMVGALQG---KCPPHMAAALAEVIREEGLMGLYRGWGASCLKVMPSSGITWMFYEAW  352 (364)
Q Consensus       289 ~Pldviktr~q~~~~~~---~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~i~~~~ye~~  352 (364)
                      +|+||||+|||.+....   ..|.++++|+++++++||++|||||+.++++|.+| ++++|.+||.+
T Consensus       227 ~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         227 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             ccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            99999999999875433   25889999999999999999999999999999877 58999999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure