Citrus Sinensis ID: 017901

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360----
Protein Sequence
MQILKARKSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD
Secondary Structure (PSIPRED)
ccHHHHHHHcccccccccHHccccccccccEEEEccccccccEEEcccccccccccccEEEEEEEEcccHHHHHHHccccccccccccccEEcccEEEEEEEEcccccccccccEEEEEccccccccccEEEEcccccccccccccccHHHHHHHcHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccEEEEccccccHHHHHHccccEEEEcccccHHHHHcccccEEEEccccHHHHHHHHHHcccccEEEEEccccHHHHHHHccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEccHHHHHHHHHHHHccccEEEEccEEcHHHHHHHHHHHHccccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHccccccccccccccccHcccHHcEEEEEEccccccEEEEEccccccccccccEEEEEEEEEcccHHHHHHcccccccccccccccccccccEEEEEEcccccEcccccEEEEEcccccccccEEEEEEEcHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHcccEEEEcccHHHHHHHcccccEEEEccccHHHHHHHHHHHccccEEEEEcccccHHHHHHcccccccccHHHHHHHHHHHHHcccccccHHHccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHcccccEEEEEEEc
Coil and Loop (DISEMBL)
MQILKARKSANDYLVSPLRFVRFLVTTscravvlprfggpevlevrpnvevpdlkpnevLVRTRavsinpldtrmrsgygrsifepllplilgrdisgeVAAVGASVRSLTVGqevfgalhptavrgtyadyavlsedeltpkpvsvthadasaiPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAsgchvsatcgskSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAvldtigapeteRLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSEtgklkipvdktfhMTQVREAHeakdkrlipgkvvlefd
Flexible Loop (DISEMBL)
mqilkarksandylvspLRFVRFLVTTSCRAvvlprfggpevlevrpnvevpdlkpnevlvrtravsinpldtrmrsgygrsIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSetgklkipvdktfhmtqvreaheakdkrlipgkvvlefd
Low Complexity Region (SEG)
MQILKARKSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRllvlggggavgfaavQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD
Disordered region (IsUnstruct)
**********NDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMT***********************
Disordered Region (DISOPRED)
**********************FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD
Disordered Region (DISEMBL)
MQILKARKSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD
Disordered Region (DISPRO)
*************LVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQILKARKSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	364	2.2.26 [Sep-21-2011]
Q0VC50	396	Reticulon-4-interacting p	yes	no	0.931	0.856	0.353	2e-51
Q924D0	396	Reticulon-4-interacting p	yes	no	0.925	0.851	0.353	6e-50
Q8WWV3	396	Reticulon-4-interacting p	yes	no	0.931	0.856	0.339	2e-48
Q7T3C7	387	Reticulon-4-interacting p	yes	no	0.950	0.894	0.329	5e-46
Q54II4	352	Reticulon-4-interacting p	yes	no	0.912	0.943	0.295	3e-43
Q9ZUC1	386	Quinone oxidoreductase-li	no	no	0.642	0.606	0.323	4e-28
Q8H0M1	329	Quinone-oxidoreductase ho	N/A	no	0.521	0.577	0.345	7e-25
O97764	330	Zeta-crystallin OS=Bos ta	no	no	0.637	0.703	0.323	1e-24
Q08257	329	Quinone oxidoreductase OS	no	no	0.521	0.577	0.353	1e-24
Q5R4S7	329	Quinone oxidoreductase OS	no	no	0.634	0.702	0.314	1e-24

>sp|Q0VC50|RT4I1_BOVIN Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1

 Score =  203 bits (516), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 197/368 (53%), Gaps = 29/368 (7%)

Query: 21  VRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTR 74
           VR + TTS R+ V+P     ++G  EVL    N+ +P +  PNEV+++  A SINP+D  
Sbjct: 30  VRKISTTSPRSTVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVN 89

Query: 75  MRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
           MRSGYG +      +PL         PL LGRD+SG V   G  VR    G EV+ A+ P
Sbjct: 90  MRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPP 149

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA----RMSEGQRL 178
              +GT +++ V+S +E++ KP S+TH  A+++P+ ALTAW A+        R   G+R+
Sbjct: 150 WK-QGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRV 208

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK- 237
           L+LG  G VG  A+Q   A   HV+A C   + + V   GA+  +DY S ++E  +K   
Sbjct: 209 LILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSK 268

Query: 238 -FDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKK 294
            FD +LD +G   TE   L FLK+  G  Y+TL        D  G+A G+ + T V +  
Sbjct: 269 PFDFILDNVGG-STETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGS 326

Query: 295 RMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRL 354
           +    +  G+ Y + +  A    L++I  L E GK++  ++KTF  ++V EA    ++  
Sbjct: 327 KTLKHFWQGVHYRWAFFMASGPCLDDIAELVEAGKIQPVIEKTFPFSKVPEAFLKVERGH 386

Query: 355 IPGKVVLE 362
             GK V+ 
Sbjct: 387 ARGKTVIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.
Bos taurus (taxid: 9913)

>sp|Q924D0|RT4I1_MOUSE Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2

 Score =  198 bits (503), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 197/368 (53%), Gaps = 31/368 (8%)

Query: 22  RFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRM 75
           R + TTS R+ V+P     ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  M
Sbjct: 31  RGISTTSARSTVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNM 90

Query: 76  RSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT 123
           RSGYG +      +PL         PL LGRD+SG V   G  V+    G EV+ A+ P 
Sbjct: 91  RSGYGATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPW 150

Query: 124 AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRLL 179
             +GT +++ V+S +E++ KP S+TH  A+++P+ ALTAW A+     +S+    G+R L
Sbjct: 151 K-QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRAL 209

Query: 180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--K 237
           +LG  G VG  A+Q   A G HV+A C   + + V   GA++ +DY+   +E  +K    
Sbjct: 210 ILGASGGVGTFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKL 269

Query: 238 FDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKK 294
           FD +LD +G   TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K 
Sbjct: 270 FDFILDNVGG-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKA 328

Query: 295 RMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRL 354
               W   G+ Y + +  A    L+EI  L + GK++  +++TF  ++V EA    ++  
Sbjct: 329 LKHLW--QGVHYRWAFFMASGPYLDEIAELVDAGKIRPVIERTFPFSEVPEAFLKVERGH 386

Query: 355 IPGKVVLE 362
             GK V+ 
Sbjct: 387 ARGKTVVN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Mus musculus (taxid: 10090)

>sp|Q8WWV3|RT4I1_HUMAN Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2

 Score =  193 bits (491), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 198/368 (53%), Gaps = 29/368 (7%)

Query: 21  VRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTR 74
           VR + TTS R+ V+P     ++G  EVL    N+ +P +  PNEV+V+  A S+NP+D  
Sbjct: 30  VRRISTTSPRSTVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVN 89

Query: 75  MRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
           MRSGYG +      +PL         PL LGRD+SG V   G  V+    G EV+ A+ P
Sbjct: 90  MRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP 149

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRL 178
              +GT +++ V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R+
Sbjct: 150 WK-QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRV 208

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG-- 236
           L+LG  G VG  A+Q   A   HV+A C   + + V   GA+  +DY S  +E  +K   
Sbjct: 209 LILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLK 268

Query: 237 KFDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKK 294
            FD +LD +G   TE    +FLK+  G  Y+TL        D  G+A G+ + T V +  
Sbjct: 269 PFDFILDNVGG-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGS 326

Query: 295 RMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRL 354
           +    +  G+ Y + +  A    L++I  L + GK++  +++TF  ++V EA    ++  
Sbjct: 327 KALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGH 386

Query: 355 IPGKVVLE 362
             GK V+ 
Sbjct: 387 ARGKTVIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Homo sapiens (taxid: 9606)

>sp|Q7T3C7|RT4I1_DANRE Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2

 Score =  185 bits (469), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 198/376 (52%), Gaps = 30/376 (7%)

Query: 13  YLVSPLR-FVRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRA 65
           +LV  LR   R    ++ R  V+P     ++G  +VL    N  +P +  PNEV+V+  A
Sbjct: 7   WLVCSLRCHYRSFSFSAARRTVMPAWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHA 66

Query: 66  VSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVG 113
             +NP+D  MR GYG +      +PL         PLILGRD+SGE+   G  V+    G
Sbjct: 67  AGLNPIDISMRGGYGAATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPG 126

Query: 114 QEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM- 172
            +V+ A+ P   +G+ A++ V+S +E++ KP S+ H +A++IP+ A TAW A+     + 
Sbjct: 127 DQVWAAIPPWK-QGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLN 185

Query: 173 ---SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD 229
              S  +R+L+LGG G VG  A+Q   A G HV+ TC   +   V   GA+  VDY++  
Sbjct: 186 KDNSAKKRVLILGGSGGVGTFAIQMVKAWGAHVTVTCSQNAERLVRDLGADDVVDYTAGP 245

Query: 230 IELAIKG--KFDAVLDTIGAPETERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLP 285
           +E  +K   KFD +LD+IG  ETE+  L+ LK   G  ++TL        D  GLA G+ 
Sbjct: 246 VEKQLKNLEKFDLILDSIGG-ETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGM- 303

Query: 286 IATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVRE 345
           + + V +  ++      G+ Y + +       L+E+  + + GK++  V++ F   QV E
Sbjct: 304 MQSAVTVGCKVVKNLRKGVHYRWGFFAPSGSALDEVSEMVDAGKVRPVVEEVFSFAQVPE 363

Query: 346 AHEAKDKRLIPGKVVL 361
           A +  ++    GK V+
Sbjct: 364 AFQKVEQGHARGKTVV 379

May be a potent inhibitor of regeneration.

Danio rerio (taxid: 7955)

>sp|Q54II4|RT4I1_DICDI Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1

 Score =  176 bits (446), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 183/349 (52%), Gaps = 17/349 (4%)

Query: 30  RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI--FEP 86
           + ++L  +G   ++LE + ++ VP    ++VL++  + SINPLD  MR GY  SI   + 
Sbjct: 2   KGILLNGYGESLDLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSIVDLKL 61

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
            LP+ILGR+ SGE+  +G SV    +G +V+ A  P ++ G++ +Y  + E E++ KP +
Sbjct: 62  KLPIILGRECSGEIVEIGDSVWDYEIGDQVWSASPPFSM-GSHCEYITVDESEISLKPKN 120

Query: 147 VTHADASAIPFAALTAWRA----LKCAARMSEGQRLLVLGGGGAVGFAAVQF--SVASGC 200
           +TH  +++IPFA+LTAW A    L    +++   ++LV GG G+VGF  +Q      +  
Sbjct: 121 LTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTKILVNGGNGSVGFFILQLLKKHLNVN 180

Query: 201 HVSATCGSKSIDRVLAAG-AEQAVDYSSKDIELAIKGKFDAVLDTI----GAPETERLGL 255
            VS TC  K  +++       + +DY++  I      KFD + +         E E+  +
Sbjct: 181 QVSTTCNIKHFEKLKKLTLVNETIDYNNLKINDNDNNKFDLIFNCYDGGKNQNENEKKCI 240

Query: 256 NFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLK--KRMQTWYSYGIDYSYIYMRA 313
           + LK GG+ +  +G     +D  G+  GLP+     L   +R++  YS  +   Y     
Sbjct: 241 DALKDGGNLIGFNGPLVKFSDKDGVLSGLPMGMMNQLNSSERIKKQYSKNVHLDYAIFSP 300

Query: 314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
               L++I +L E   L   +DK F++ Q+++A+   +     GK+++ 
Sbjct: 301 SGSTLKQISKLYENNILIPNIDKQFNLNQIKDAYTCFENSNSNGKIIIN 349

Dictyostelium discoideum (taxid: 44689)

>sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 135/247 (54%), Gaps = 13/247 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V   +GG +VL++  N+ VP++K ++VL++  A ++NP+D + R G  ++   P LP
Sbjct: 79  KAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSP-LP 137

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-----GTYADYAVLSEDELTPKP 144
            + G D++G V  VG++V+ L  G EV+  +   A+      G+ A+Y  + E  L  KP
Sbjct: 138 TVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKP 197

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS--VASGCHV 202
            ++  A A+ +P A  TA   L      S G+ +LVL G G VG   +Q +  V     V
Sbjct: 198 KNIDFAQAAGLPLAIETADEGL-VRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKV 256

Query: 203 SATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           +AT  ++ ++ V + GA+ A+DY+ ++IE  +  K+D V D IG  +     +  +K GG
Sbjct: 257 AATASTEKLELVRSLGADLAIDYTKENIE-DLPDKYDVVFDAIGMCDK---AVKVIKEGG 312

Query: 263 HYMTLHG 269
             + L G
Sbjct: 313 KVVALTG 319

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8H0M1|QORH_SPIOL Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1

 Score =  115 bits (287), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 7/197 (3%)

Query: 38  GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDIS 97
           GG + L+    V VPD K +E+L++  A ++NP+D +++ G  R +     P I G D++
Sbjct: 16  GGTDALK-HVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRKFPTIPGTDVA 74

Query: 98  GEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF 157
           GEV   G++V     G +V   L   A  G  A+YAV  E+    +P  V+ A+ +A+P 
Sbjct: 75  GEVVQAGSAVNRFKTGDKVVAVLS-HATGGALAEYAVAKENLTVARPPEVSAAEGAALPV 133

Query: 158 AALTAWRALKCAARMS-----EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID 212
           AALTA +AL   A +      E + +L+    G VG  AVQ +     HV+ATCG++++D
Sbjct: 134 AALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLGNTHVTATCGARNLD 193

Query: 213 RVLAAGAEQAVDYSSKD 229
            V   GA++ +DY + +
Sbjct: 194 FVKGLGADEVLDYKTPE 210

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O97764|QOR_BOVIN Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 124/244 (50%), Gaps = 12/244 (4%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RA+ +  FGGPEVL+++ +V VP  K ++VL++ +A  +NP+DT +RSG      +PLLP
Sbjct: 9   RAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHN--IKPLLP 66

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
              G D++G + AVG SV +   G  VF       + G YA+YA+ ++  +   P  +  
Sbjct: 67  YTPGFDVAGIIEAVGESVSAFKKGDRVFTT---RTISGGYAEYALAADHTVYTLPEKLDF 123

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
              +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  V  T  ++
Sbjct: 124 KQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTE 183

Query: 210 SIDR-VLAAGAEQAVDYSSKDIELAIKGK-----FDAVLDTIGAPETERLGLNFLKRGGH 263
              + VL  GA +  ++   D    IK        D +++ +         LN L  GG 
Sbjct: 184 EGQKIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSN-DLNLLSHGGR 242

Query: 264 YMTL 267
            + +
Sbjct: 243 VIVV 246

Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding (By similarity). Has minimal or no quinone reductase activity. Binds strongly to single-stranded DNA.

Bos taurus (taxid: 9913)

>sp|Q08257|QOR_HUMAN Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 8/198 (4%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAV +  FGGPEVL++R ++ VP  K ++VL++  A  +NP++T +RSG Y R   +PLL
Sbjct: 9   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR---KPLL 65

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P   G D++G + AVG +  +   G  VF +   + + G YA+YA+ ++  +   P  + 
Sbjct: 66  PYTPGSDVAGVIEAVGDNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLD 122

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
               +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  +  T G+
Sbjct: 123 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT 182

Query: 209 KSIDR-VLAAGAEQAVDY 225
           +   + VL  GA +  ++
Sbjct: 183 EEGQKIVLQNGAHEVFNH 200

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species. Enhances the stability of mRNA coding for BCL2. NADPH binding interferes with mRNA binding.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q5R4S7|QOR_PONAB Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 14/245 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAV +  FGGPEVL+++ ++ VP  K ++ L++  A  +NP++T +RSG Y R   +PLL
Sbjct: 9   RAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSR---KPLL 65

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P   G D++G + AVG +  +   G  VF +   + + G YA+YA+ ++  +   P  + 
Sbjct: 66  PYTPGSDVAGVIEAVGGNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLD 122

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
               +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  V  T G+
Sbjct: 123 FKQGAAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGT 182

Query: 209 KSIDR-VLAAGAEQA-----VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           +   + VL  GA +      V+Y  K  +   +   D +++ +      +  L+ L  GG
Sbjct: 183 EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDVIIEMLANVNLNK-DLSLLSHGG 241

Query: 263 HYMTL 267
             + +
Sbjct: 242 QVIVV 246

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
255554648	365	zinc binding dehydrogenase, putative [Ri	0.997	0.994	0.765	1e-156
225461572	361	PREDICTED: reticulon-4-interacting prote	0.939	0.947	0.787	1e-149
302142942	396	unnamed protein product [Vitis vinifera]	0.939	0.863	0.787	1e-149
357136468	364	PREDICTED: reticulon-4-interacting prote	0.925	0.925	0.747	1e-145
224061278	342	predicted protein [Populus trichocarpa]	0.939	1.0	0.775	1e-145
356544066	364	PREDICTED: reticulon-4-interacting prote	0.928	0.928	0.739	1e-142
115439983	365	Os01g0753100 [Oryza sativa Japonica Grou	0.925	0.923	0.765	1e-140
356546840	364	PREDICTED: reticulon-4-interacting prote	0.928	0.928	0.733	1e-139
125572052	365	hypothetical protein OsJ_03482 [Oryza sa	0.925	0.923	0.756	1e-138
21592930	366	zinc-binding dehydrogenase, putative [Ar	0.931	0.926	0.710	1e-137

>gi|255554648|ref|XP_002518362.1| zinc binding dehydrogenase, putative [Ricinus communis] gi|223542457|gb|EEF43998.1| zinc binding dehydrogenase, putative [Ricinus communis]

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 280/366 (76%), Positives = 327/366 (89%), Gaps = 3/366 (0%)

Query: 1   MQILKAR--KSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNE 58
           MQ L+A   K++++Y +  L  VRFLVT SCRAVVLPRFGGPEVLE+R +VEVP +KPNE
Sbjct: 1   MQFLRAHSLKTSSEYQILKLGSVRFLVT-SCRAVVLPRFGGPEVLELRSDVEVPQIKPNE 59

Query: 59  VLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFG 118
           VLVRTRAVS+NPLDTRMRSGYGRSIFEPLLPLILGRDISGEV A+G SV+SL+VGQEVFG
Sbjct: 60  VLVRTRAVSVNPLDTRMRSGYGRSIFEPLLPLILGRDISGEVTAIGTSVQSLSVGQEVFG 119

Query: 119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRL 178
           ALHPTAVRGTY DYA+LSEDELT KP SV+H +ASAIPFAALTAWRALK  AR++EGQR+
Sbjct: 120 ALHPTAVRGTYTDYAILSEDELTAKPASVSHVEASAIPFAALTAWRALKSTARINEGQRV 179

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKF 238
           L++GGGGAVGFAA+Q +VA+GCHV+ATCGS SIDRVL AGAE+A+DY ++DIELAIKGKF
Sbjct: 180 LIVGGGGAVGFAAIQLAVAAGCHVTATCGSLSIDRVLKAGAERAIDYIAEDIELAIKGKF 239

Query: 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT 298
           DAVLDTIG PETER+G+NFLKRGG YMTL GE A++ D YG+A+GLPIAT +LLKK++Q 
Sbjct: 240 DAVLDTIGVPETERIGINFLKRGGQYMTLQGEAASVTDRYGIAVGLPIATAILLKKQIQY 299

Query: 299 WYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGK 358
            YS+GI+Y + YMRAD++GL+EIRRLSE GKLK+PV+KTF  TQVREAHEAK+KRLIPGK
Sbjct: 300 RYSHGIEYWWTYMRADSDGLDEIRRLSEAGKLKVPVEKTFPFTQVREAHEAKEKRLIPGK 359

Query: 359 VVLEFD 364
           VVLE D
Sbjct: 360 VVLELD 365

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461572|ref|XP_002285254.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Vitis vinifera]

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/343 (78%), Positives = 308/343 (89%), Gaps = 1/343 (0%)

Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR 81
           RF+VTT CRAVVLPRFGGP VLE+RP+  VPDLKP EVLVRTRAVSINPLDTRMRSGYGR
Sbjct: 20  RFIVTT-CRAVVLPRFGGPHVLELRPDAPVPDLKPTEVLVRTRAVSINPLDTRMRSGYGR 78

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELT 141
           SIF PLLPLILGRDISGEVAA GASVRSL+VGQEVFGALHPTAVRGTYADYA+LSEDELT
Sbjct: 79  SIFGPLLPLILGRDISGEVAATGASVRSLSVGQEVFGALHPTAVRGTYADYAILSEDELT 138

Query: 142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH 201
            KPVS++H +ASAIPFAALTAWRALK  AR++EGQR+L++GGGGAVGFAA+Q  VA+GCH
Sbjct: 139 SKPVSISHVEASAIPFAALTAWRALKSTARIAEGQRILIVGGGGAVGFAAIQLCVATGCH 198

Query: 202 VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
           VS TCGS+S+  +LAAGAEQAVDY+S+DIE A+KG FDAVLDTIG P+TER+G+N LKRG
Sbjct: 199 VSTTCGSQSLAWILAAGAEQAVDYTSEDIESALKGNFDAVLDTIGVPDTERVGINLLKRG 258

Query: 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEI 321
           GHYMTL GE A+L+D YGLA+GLP AT +LLKK++Q  +S+GI+YS+ YMRAD+EGL EI
Sbjct: 259 GHYMTLQGEAASLSDRYGLAVGLPAATAMLLKKQLQYRFSHGIEYSWTYMRADSEGLYEI 318

Query: 322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
            +LSE GKLKIPV+KTF +TQVREAHEAKD R IPGKVVLE D
Sbjct: 319 CKLSEAGKLKIPVEKTFPITQVREAHEAKDNRQIPGKVVLELD 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142942|emb|CBI20237.3| unnamed protein product [Vitis vinifera]

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/343 (78%), Positives = 308/343 (89%), Gaps = 1/343 (0%)

Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR 81
           RF+VTT CRAVVLPRFGGP VLE+RP+  VPDLKP EVLVRTRAVSINPLDTRMRSGYGR
Sbjct: 55  RFIVTT-CRAVVLPRFGGPHVLELRPDAPVPDLKPTEVLVRTRAVSINPLDTRMRSGYGR 113

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELT 141
           SIF PLLPLILGRDISGEVAA GASVRSL+VGQEVFGALHPTAVRGTYADYA+LSEDELT
Sbjct: 114 SIFGPLLPLILGRDISGEVAATGASVRSLSVGQEVFGALHPTAVRGTYADYAILSEDELT 173

Query: 142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH 201
            KPVS++H +ASAIPFAALTAWRALK  AR++EGQR+L++GGGGAVGFAA+Q  VA+GCH
Sbjct: 174 SKPVSISHVEASAIPFAALTAWRALKSTARIAEGQRILIVGGGGAVGFAAIQLCVATGCH 233

Query: 202 VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
           VS TCGS+S+  +LAAGAEQAVDY+S+DIE A+KG FDAVLDTIG P+TER+G+N LKRG
Sbjct: 234 VSTTCGSQSLAWILAAGAEQAVDYTSEDIESALKGNFDAVLDTIGVPDTERVGINLLKRG 293

Query: 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEI 321
           GHYMTL GE A+L+D YGLA+GLP AT +LLKK++Q  +S+GI+YS+ YMRAD+EGL EI
Sbjct: 294 GHYMTLQGEAASLSDRYGLAVGLPAATAMLLKKQLQYRFSHGIEYSWTYMRADSEGLYEI 353

Query: 322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
            +LSE GKLKIPV+KTF +TQVREAHEAKD R IPGKVVLE D
Sbjct: 354 CKLSEAGKLKIPVEKTFPITQVREAHEAKDNRQIPGKVVLELD 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357136468|ref|XP_003569826.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Brachypodium distachyon]

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/337 (74%), Positives = 291/337 (86%)

Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           S RAV++PRFGGPEVLE+R  V VPDLKP EVLVR RAVSINPLD RMRSGYGR IFEPL
Sbjct: 28  SSRAVLVPRFGGPEVLELRQGVPVPDLKPGEVLVRARAVSINPLDLRMRSGYGRCIFEPL 87

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LPLILGRDISGEVAA G SV S  +GQEVFGALHPTA+RGT ADYA+LS+DELTPKP  +
Sbjct: 88  LPLILGRDISGEVAATGTSVSSFFIGQEVFGALHPTAMRGTCADYAILSQDELTPKPSML 147

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           TH +ASAIPFAALTAWRAL   A +SEGQR+LV+GGGGAVG +AVQ +VA+GC VSATCG
Sbjct: 148 THVEASAIPFAALTAWRALHGTAGISEGQRVLVIGGGGAVGLSAVQLAVAAGCSVSATCG 207

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
           ++SI++VLAAGAE+A+DY+S+D E A+ GKFDAVLDTIG PETER+G+N L+RGGHYMTL
Sbjct: 208 AQSIEQVLAAGAEKAIDYTSEDTESAVTGKFDAVLDTIGVPETERIGINLLRRGGHYMTL 267

Query: 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSET 327
            GE AALAD YGL +GLP AT  LLKK+MQ   S+GI+Y + YMRAD EGL EIRRLS  
Sbjct: 268 QGEAAALADRYGLYVGLPAATATLLKKQMQYRCSHGIEYWWTYMRADPEGLHEIRRLSGA 327

Query: 328 GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
           GKL+IPV+KTF ++QVREAHEAK+K+L+PGKVVLEFD
Sbjct: 328 GKLQIPVEKTFPISQVREAHEAKEKKLVPGKVVLEFD 364

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061278|ref|XP_002300404.1| predicted protein [Populus trichocarpa] gi|222847662|gb|EEE85209.1| predicted protein [Populus trichocarpa]

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/343 (77%), Positives = 304/343 (88%), Gaps = 1/343 (0%)

Query: 21  VRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG 80
           VRF + TSCRAVVLPRFGGPE+L++R +VEVP LKPNEVLVR RAVSINPLDTRMRSGYG
Sbjct: 1   VRF-IATSCRAVVLPRFGGPEMLQLRSDVEVPQLKPNEVLVRARAVSINPLDTRMRSGYG 59

Query: 81  RSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140
           RSIFEPLLPLILGRDISGEVAAVG SVRS +VG+EVFGALHPTAVRGTY DYAVLSEDEL
Sbjct: 60  RSIFEPLLPLILGRDISGEVAAVGNSVRSFSVGEEVFGALHPTAVRGTYTDYAVLSEDEL 119

Query: 141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
            PKP S+TH +ASAIPFAALTAWRALK  AR++EGQR+LV+GGGGAVG AA+Q + A+ C
Sbjct: 120 APKPPSLTHVEASAIPFAALTAWRALKSTARITEGQRILVVGGGGAVGLAAIQLAAAARC 179

Query: 201 HVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKR 260
           HV+ TCG +SIDRVL AGAEQAVDY+++DIELAIKGKFDAVLDTIG PETER+G+ FLKR
Sbjct: 180 HVTTTCGGQSIDRVLEAGAEQAVDYTAEDIELAIKGKFDAVLDTIGVPETERIGIKFLKR 239

Query: 261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE 320
           GGHYMTL GE A+L D YGL  GLP+AT +LLKK++Q  YS+GI+Y + YMRAD++GL+E
Sbjct: 240 GGHYMTLQGEAASLTDRYGLVAGLPMATAILLKKQIQYRYSHGIEYWWTYMRADSDGLDE 299

Query: 321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
           I RLSE GK+KIPV+KTF +TQ REAHEAKDK+ IPGKVVLE 
Sbjct: 300 IHRLSEAGKMKIPVEKTFPITQAREAHEAKDKKKIPGKVVLEL 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544066|ref|XP_003540476.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Glycine max]

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/338 (73%), Positives = 302/338 (89%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           + CRAV+LP FGGP VL++R +V VP LKP++VLVR RAVS+NPLDTRMR+GYGRSIFEP
Sbjct: 27  SDCRAVLLPSFGGPHVLQLRSHVPVPPLKPHDVLVRARAVSVNPLDTRMRAGYGRSIFEP 86

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
           LLPLILGRD+SGEV+AVG  VRS++VG++VFGALHPTAVRGTY+DYA+LSE+E+TPKP S
Sbjct: 87  LLPLILGRDVSGEVSAVGDKVRSVSVGEQVFGALHPTAVRGTYSDYAILSEEEVTPKPDS 146

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           +TH +ASAIPFAALTAWRALK  AR+SEGQR+LV+GGGGAVG +AVQ +VA+GC V+ TC
Sbjct: 147 LTHVEASAIPFAALTAWRALKSTARISEGQRILVVGGGGAVGLSAVQLAVAAGCSVATTC 206

Query: 207 GSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
           GS+S+DR+LAAGA+QAVDY ++D+ELAIKGKFDAVLDTIG PETER+G+NFLKRGGHYMT
Sbjct: 207 GSQSVDRLLAAGADQAVDYVAEDVELAIKGKFDAVLDTIGVPETERMGINFLKRGGHYMT 266

Query: 267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSE 326
           L GE A+L+D YGL +GLP AT VLLKK++   +S+GI+YS+ YMRAD +GL EIR+L E
Sbjct: 267 LQGEAASLSDRYGLTIGLPAATAVLLKKQLLYRFSHGIEYSWTYMRADLDGLIEIRKLCE 326

Query: 327 TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
            GK+KIPV KTF +TQV+EAHEAKDK+LIPGKVVLE D
Sbjct: 327 AGKMKIPVYKTFPITQVKEAHEAKDKKLIPGKVVLELD 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115439983|ref|NP_001044271.1| Os01g0753100 [Oryza sativa Japonica Group] gi|57899609|dbj|BAD87188.1| putative NOGO-interacting mitochondrial protein [Oryza sativa Japonica Group] gi|57900324|dbj|BAD87277.1| putative NOGO-interacting mitochondrial protein [Oryza sativa Japonica Group] gi|113533802|dbj|BAF06185.1| Os01g0753100 [Oryza sativa Japonica Group] gi|218189067|gb|EEC71494.1| hypothetical protein OsI_03764 [Oryza sativa Indica Group]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/337 (76%), Positives = 300/337 (89%)

Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           SCRAVV+PRFGGPEVLEVR  V VPDLKP +VLVR RAVSINPLD RMRSGYGRSIFEP+
Sbjct: 29  SCRAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPV 88

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LPLI+GRDISGEVAA G SV S T+GQEVFGALHPTA+RGTY DYA+LS+DELT KP ++
Sbjct: 89  LPLIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTL 148

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +H +ASAIPFAALTAWRAL   AR+SEGQR+LV+GGGGAVG AAVQ +VA+GC VSATCG
Sbjct: 149 SHVEASAIPFAALTAWRALHGTARISEGQRVLVIGGGGAVGLAAVQLAVAAGCSVSATCG 208

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
           +KSI++VLAAGAE+A+DY+++D E A+KGKFDAVLDTIG PETER+G+N L+RGGHYMTL
Sbjct: 209 TKSIEQVLAAGAEKAIDYTAEDTESAVKGKFDAVLDTIGVPETERIGINVLRRGGHYMTL 268

Query: 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSET 327
            GE AALAD YGLA+GLP AT VLLKK+MQ  YS+GIDY + YMRAD+EGL EI+RLS  
Sbjct: 269 QGEAAALADRYGLAVGLPAATAVLLKKQMQYRYSHGIDYWWTYMRADSEGLHEIQRLSGA 328

Query: 328 GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
           GKL+IPV+KTF +++VREAHEAK+KRL+PGKVVLEFD
Sbjct: 329 GKLQIPVEKTFPISKVREAHEAKEKRLVPGKVVLEFD 365

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546840|ref|XP_003541830.1| PREDICTED: reticulon-4-interacting protein 1 homolog, mitochondrial-like [Glycine max]

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/338 (73%), Positives = 297/338 (87%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           + CRAV+LP FGGP +L++R +V VP LK ++VLVR RAVS+NPLDTRMR+GYGRSIFE 
Sbjct: 27  SDCRAVLLPSFGGPHLLQLRSHVPVPPLKSHDVLVRARAVSVNPLDTRMRAGYGRSIFER 86

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
           LLP+ILGRD+SGEVAAVG  VR ++VG++VFGALHPTAVRGTYADYA+LSE+E+TPKP S
Sbjct: 87  LLPIILGRDVSGEVAAVGDKVRLVSVGEQVFGALHPTAVRGTYADYAILSEEEVTPKPDS 146

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           +TH +ASAIPFAALTAWRALK  AR+SEGQR+LV+GGGGAVG +AVQF+VA+GC V  TC
Sbjct: 147 LTHVEASAIPFAALTAWRALKSTARISEGQRILVVGGGGAVGLSAVQFAVAAGCSVVTTC 206

Query: 207 GSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
           GS+S+DR+LAAGAEQAVDY ++D+ELAIKGKFDAVLDTIG PETER+G+NFLKRGGHYMT
Sbjct: 207 GSQSVDRLLAAGAEQAVDYIAEDVELAIKGKFDAVLDTIGMPETERMGINFLKRGGHYMT 266

Query: 267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSE 326
           L GE A+L+D YGL +GLP AT VLLKK++   +S+GI+YS+ YMR D EGL EIR+L E
Sbjct: 267 LQGEAASLSDRYGLIIGLPAATAVLLKKQLLYRFSHGIEYSWTYMRDDLEGLTEIRKLCE 326

Query: 327 TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
            GK+KIPV KTF + QV+EAHEAKDK+LIPGKVVLE D
Sbjct: 327 AGKMKIPVYKTFPIAQVKEAHEAKDKKLIPGKVVLEID 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125572052|gb|EAZ13567.1| hypothetical protein OsJ_03482 [Oryza sativa Japonica Group]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/337 (75%), Positives = 299/337 (88%)

Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           SCRAVV+PRFGGPEVLEVR  V VPDLKP +VLVR RAVSINPLD RMRSGYGRSIFEP+
Sbjct: 29  SCRAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPV 88

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LPLI+GRDISGEVAA G SV S T+GQEVFGALHPTA+RGTY DYA+LS+DELT KP ++
Sbjct: 89  LPLIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTL 148

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +H +ASAIPFAALTAWRAL   AR+SEGQR+LV+GGGGAVG AAVQ +VA+GC VSATCG
Sbjct: 149 SHVEASAIPFAALTAWRALHGTARISEGQRVLVIGGGGAVGLAAVQLAVAAGCSVSATCG 208

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
           +KSI++VLAAGAE+A+DY+++D E A+KGKFDAVLDTIG PETER+G+N L++GG YMTL
Sbjct: 209 TKSIEQVLAAGAEKAIDYTAEDTESAVKGKFDAVLDTIGVPETERIGINVLRKGGPYMTL 268

Query: 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSET 327
            G+ AALAD YGLA+GLP AT VLLKK+MQ  YS+GIDY + YMRAD+EGL EI+RLS  
Sbjct: 269 QGKAAALADRYGLAVGLPAATAVLLKKQMQYRYSHGIDYWWTYMRADSEGLHEIQRLSGA 328

Query: 328 GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
           GKL+IPV+KTF +++VREAHEAK+KRL+PGKVVLEFD
Sbjct: 329 GKLQIPVEKTFPISKVREAHEAKEKRLVPGKVVLEFD 365

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592930|gb|AAM64880.1| zinc-binding dehydrogenase, putative [Arabidopsis thaliana]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 241/339 (71%), Positives = 295/339 (87%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           V T CRAV+LPRFGGPEV E+R NV VP+L PNEVLV+ +AVS+NPLD R+R+GYGRS+F
Sbjct: 28  VFTGCRAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVF 87

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
           +P LP+I+GRD+SGEVAA+G SV+SL VGQEVFGALHPTA+RGTY DY +LSEDELT KP
Sbjct: 88  QPHLPIIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKP 147

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
            S++H +ASAIPFAALTAWRALK  AR++EGQRLLV GGGGAVGF+A+Q +VASGCHV+A
Sbjct: 148 SSISHVEASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLAVASGCHVTA 207

Query: 205 TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
           +C  ++ DR+LAAGAEQAVDY+++DIELA+KGKFDAVLDTIG PETER+G+NFL++GG+Y
Sbjct: 208 SCVGQTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKGGNY 267

Query: 265 MTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL 324
           MTL GE A+L D YG  +GLP+AT++L+KK++Q  YS+GIDY + YMRAD EGL EI+RL
Sbjct: 268 MTLQGEAASLTDKYGFVVGLPLATSLLMKKKIQYQYSHGIDYWWTYMRADPEGLAEIQRL 327

Query: 325 SETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
              GKLKIPV+KTF +T V  AHEAK+K+ IPGKVVLEF
Sbjct: 328 VGAGKLKIPVEKTFPITDVVAAHEAKEKKQIPGKVVLEF 366

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
TAIR|locus:2086335	366	AT3G15090 [Arabidopsis thalian	0.931	0.926	0.675	1.3e-123
MGI|MGI:2178759	396	Rtn4ip1 "reticulon 4 interacti	0.912	0.838	0.332	1.3e-43
UNIPROTKB|Q0VC50	396	RTN4IP1 "Reticulon-4-interacti	0.914	0.840	0.327	1.7e-43
RGD|1563384	396	Rtn4ip1 "reticulon 4 interacti	0.912	0.838	0.335	2.2e-43
UNIPROTKB|F6V4D2	426	RTN4IP1 "Uncharacterized prote	0.914	0.781	0.324	2.8e-43
UNIPROTKB|F1RT47	396	LOC100627610 "Uncharacterized	0.917	0.843	0.324	7.3e-43
UNIPROTKB|E2QRQ9	397	RTN4IP1 "Uncharacterized prote	0.914	0.838	0.324	2.5e-42
UNIPROTKB|Q8WWV3	396	RTN4IP1 "Reticulon-4-interacti	0.914	0.840	0.316	4.6e-41
UNIPROTKB|I3LFW7	362	LOC100627610 "Uncharacterized	0.829	0.834	0.328	4.8e-39
ZFIN|ZDB-GENE-040426-1314	387	rtn4ip1 "reticulon 4 interacti	0.898	0.844	0.308	6.1e-39

TAIR|locus:2086335 AT3G15090 [Arabidopsis thaliana (taxid:3702)]

 Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
 Identities = 229/339 (67%), Positives = 281/339 (82%)

Query:    25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             V T CRAV+LPRFGGPEV E+R NV VP+L PNEVLV+ +AVS+NPLD R+R+GYGRS+F
Sbjct:    28 VFTGCRAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVF 87

Query:    85 EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
             +P LP+I+GRD+SGEVAA+G SV+SL VGQEVFGALHPTA+RGTY DY +LSEDELT KP
Sbjct:    88 QPHLPIIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKP 147

Query:   145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSA 204
              S++H +ASAIPFAALTAWRALK  AR++EGQR               Q +VASGCHV+A
Sbjct:   148 SSISHVEASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLAVASGCHVTA 207

Query:   205 TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
             +C  ++ DR+LAAGAEQAVDY+++DIELA+KGKFDAVLDTIG PETER+G+NFL++GG+Y
Sbjct:   208 SCVGQTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKGGNY 267

Query:   265 MTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL 324
             MTL GE A+L D YG  +GLP+AT++L+KK++Q  YS+GIDY + YMRAD EGL EI+RL
Sbjct:   268 MTLQGEAASLTDKYGFVVGLPLATSLLMKKKIQYQYSHGIDYWWTYMRADPEGLAEIQRL 327

Query:   325 SETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
                GKLKIPV+KTF +T V  AHEAK+K+ IPGKVVLEF
Sbjct:   328 VGAGKLKIPVEKTFPITDVVAAHEAKEKKQIPGKVVLEF 366

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

MGI|MGI:2178759 Rtn4ip1 "reticulon 4 interacting protein 1" [Mus musculus (taxid:10090)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 119/358 (33%), Positives = 183/358 (51%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +S+    G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK--FDAVLDTIG 246
                 Q   A G HV+A C   + + V   GA++ +DY+   +E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTWYSYG 303
                TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K     W   G
Sbjct:   279 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALKHLWQ--G 335

Query:   304 IDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
             + Y + +  A    L+EI  L + GK++  +++TF  ++V EA    ++    GK V+
Sbjct:   336 VHYRWAFFMASGPYLDEIAELVDAGKIRPVIERTFPFSEVPEAFLKVERGHARGKTVV 393

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q0VC50 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 117/357 (32%), Positives = 183/357 (51%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A SINP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  VR    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK--FDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
                TE   L FLK+  G  Y+TL        D  G+A G+ + T V +  +    +  G+
Sbjct:   279 G-STETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKTLKHFWQGV 336

Query:   305 DYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
              Y + +  A    L++I  L E GK++  ++KTF  ++V EA    ++    GK V+
Sbjct:   337 HYRWAFFMASGPCLDDIAELVEAGKIQPVIEKTFPFSKVPEAFLKVERGHARGKTVI 393

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1563384 Rtn4ip1 "reticulon 4 interacting protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 120/358 (33%), Positives = 182/358 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  VR    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVRYFQPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA----ARMSEGQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+       A+   G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNAKNCMGKRALILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK--FDAVLDTIG 246
                 Q   A G HV+A C   + + V   GA++ +DY+   +E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTMGSVEEQLKSLKLFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTWYSYG 303
                TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K     W   G
Sbjct:   279 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGTKALKHLWQ--G 335

Query:   304 IDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
             + Y + +  A    L+EI  L + GK++  +++TF  ++V EA    ++    GK V+
Sbjct:   336 VHYRWAFFMASGPYLDEIAELVDGGKIRPVIERTFPFSEVPEAFLKVERGHARGKTVV 393

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F6V4D2 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 116/357 (32%), Positives = 185/357 (51%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  MRSGYG +  
Sbjct:    70 STVMPAWVIDKYGKNEVLRFTQNMMIPVIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 129

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  VR    G EV+ A+ P   +GT +++
Sbjct:   130 NMKRDPLHIKTKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWK-QGTLSEF 188

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V++ +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   189 VVVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 248

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +G
Sbjct:   249 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEEQLKSLKPFDFILDNVG 308

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
                TE   LNFLK+  G  Y+TL        D  G+A G+ + T V +  +    +  G+
Sbjct:   309 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKALKHFWQGV 366

Query:   305 DYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
              Y + +  A    L++I +L + GK++  ++KTF  +QV EA    ++    GK V+
Sbjct:   367 HYRWAFFMASGLYLDDIAKLVDEGKIRPVIEKTFPFSQVPEAFLKVERGHARGKTVI 423

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1RT47 LOC100627610 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 116/358 (32%), Positives = 185/358 (51%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A SINP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGNNEVLRFTQNMMLPMIHYPNEVVIKVHAASINPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHIRIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCRGKRVLILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNMEEQLKSFKPFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
                TE   LNFLK+  G  Y+TL        D  G+A G+ + T V +  +    +  G+
Sbjct:   279 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKTLKHFWQGV 336

Query:   305 DYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
              Y + +  A    L++I  L + GK++  ++KTF  ++V EA    ++    GK V++
Sbjct:   337 HYRWAFFMASGPYLDDIAELVDAGKIQPVIEKTFPFSKVPEAFLKVERGHARGKTVIK 394

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2QRQ9 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 116/358 (32%), Positives = 186/358 (51%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMIPVIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  VR    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHIKTKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V++ +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 218

Query:   189 XXXXQFSV-ASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTI 245
                 Q  + A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +
Sbjct:   219 TFAIQQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEEQLKSLKPFDFILDNV 278

Query:   246 GAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYG 303
             G   TE   LNFLK+  G  Y+TL        D  G+A G+ + T V +  +    +  G
Sbjct:   279 GG-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKALKHFWQG 336

Query:   304 IDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
             + Y + +  A    L++I +L + GK++  ++KTF  +QV EA    ++    GK V+
Sbjct:   337 VHYRWAFFMASGLYLDDIAKLVDEGKIRPVIEKTFPFSQVPEAFLKVERGHARGKTVI 394

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8WWV3 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 113/357 (31%), Positives = 182/357 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+V+  A S+NP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S  +E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
                TE    +FLK+  G  Y+TL        D  G+A G+ + T V +  +    +  G+
Sbjct:   279 G-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKALKHFWKGV 336

Query:   305 DYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
              Y + +  A    L++I  L + GK++  +++TF  ++V EA    ++    GK V+
Sbjct:   337 HYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVI 393

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|I3LFW7 LOC100627610 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 107/326 (32%), Positives = 167/326 (51%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A SINP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGNNEVLRFTQNMMLPMIHYPNEVVIKVHAASINPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHIRIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCRGKRVLILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNMEEQLKSFKPFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
                TE   LNFLK+  G  Y+TL        D  G+A G+ + T V +  +    +  G+
Sbjct:   279 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKTLKHFWQGV 336

Query:   305 DYSYIYMRADAEGLEEIRRLSETGKL 330
              Y + +  A    L++I  L + GK+
Sbjct:   337 HYRWAFFMASGPYLDDIAELVDAGKV 362

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-040426-1314 rtn4ip1 "reticulon 4 interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 109/353 (30%), Positives = 184/353 (52%)

Query:    31 AVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----E 85
             A V+ ++G  +VL    N  +P +  PNEV+V+  A  +NP+D  MR GYG +      +
Sbjct:    31 AWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRD 90

Query:    86 PL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE 137
             PL         PLILGRD+SGE+   G  V+    G +V+ A+ P   +G+ A++ V+S 
Sbjct:    91 PLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWK-QGSLAEFVVVSG 149

Query:   138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSV- 196
             +E++ KP S+ H +A++IP+ A TAW A+     +++                   F++ 
Sbjct:   150 NEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQ 209

Query:   197 ---ASGCHVSATCGSKSIDRVLA-AGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPET 250
                A G HV+ TC S++ +R++   GA+  VDY++  +E  +K   KFD +LD+IG  ET
Sbjct:   210 MVKAWGAHVTVTC-SQNAERLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILDSIGG-ET 267

Query:   251 ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSY 308
             E+  L+ LK   G  ++TL        D  GLA G+ + + V +  ++      G+ Y +
Sbjct:   268 EKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGM-MQSAVTVGCKVVKNLRKGVHYRW 326

Query:   309 IYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
              +       L+E+  + + GK++  V++ F   QV EA +  ++    GK V+
Sbjct:   327 GFFAPSGSALDEVSEMVDAGKVRPVVEEVFSFAQVPEAFQKVEQGHARGKTVV 379

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7T3C7	RT4I1_DANRE	No assigned EC number	0.3297	0.9505	0.8940	yes	no
Q8WWV3	RT4I1_HUMAN	No assigned EC number	0.3396	0.9313	0.8560	yes	no
Q924D0	RT4I1_MOUSE	No assigned EC number	0.3532	0.9258	0.8510	yes	no
Q0VC50	RT4I1_BOVIN	No assigned EC number	0.3532	0.9313	0.8560	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027760001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (361 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	364
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	7e-95
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-90
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-83
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	1e-66
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-65
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-56
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-55
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	6e-55
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	6e-55
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-53
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	7e-50
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	7e-48
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-47
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	5e-47
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-44
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-44
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-44
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	4e-40
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-39
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-38
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-37
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	6e-37
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	1e-31
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-31
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-31
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-31
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	7e-31
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-30
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	3e-30
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	7e-30
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-29
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	8e-27
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-25
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	2e-24
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	8e-23
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	2e-22
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	4e-22
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-20
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	1e-20
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-20
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	3e-20
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	4e-20
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	4e-20
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-18
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-18
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	4e-18
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	5e-18
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	2e-17
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	3e-17
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-16
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	7e-16
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	1e-15
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	2e-15
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-15
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	3e-15
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	4e-15
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	7e-15
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	3e-14
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	9e-14
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-13
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	1e-13
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	7e-13
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	8e-13
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-12
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-12
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	1e-11
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	3e-10
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	4e-10
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	9e-10
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-09
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	6e-09
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	1e-08
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-08
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	2e-08
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-08
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	4e-08
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-07
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	2e-07
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-07
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	3e-07
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	6e-07
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-06
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	1e-06
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-05
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-05
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	5e-05
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-04
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-04
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	3e-04
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	4e-04
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	4e-04
COG2145	265	COG2145, ThiM, Hydroxyethylthiazole kinase, sugar	6e-04
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	0.001
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	0.001
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.001
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	0.002
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	0.002
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	0.004

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  284 bits (730), Expect = 7e-95
 Identities = 123/333 (36%), Positives = 173/333 (51%), Gaps = 26/333 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV +  +GGPEVLE+   V  P+  P EVLV+  A  +NP+D ++R G  ++ F   LP
Sbjct: 2   KAVRIHEYGGPEVLELAD-VPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
           LI G D++G V AVG  V    VG EVFG    T   G YA+Y V+  DEL  KP +++ 
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTR-GGAYAEYVVVPADELALKPANLSF 119

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
            +A+A+P A LTAW+AL     +  GQ +L+ G  G VG  AVQ + A G  V AT  + 
Sbjct: 120 EEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA 179

Query: 210 SIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH 268
           + D + + GA++ +DY+  D E A   G  DAVLDT+G     R  L  +K GG  +++ 
Sbjct: 180 NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARS-LALVKPGGRLVSIA 238

Query: 269 GETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETG 328
           G   A                       Q     G+   ++++  D E L E+  L E G
Sbjct: 239 GPPPA----------------------EQAAKRRGVRAGFVFVEPDGEQLAELAELVEAG 276

Query: 329 KLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
           KL+  VD+ F +    EAHE  +     GKVVL
Sbjct: 277 KLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  275 bits (706), Expect = 1e-90
 Identities = 130/351 (37%), Positives = 202/351 (57%), Gaps = 24/351 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIF---- 84
           +A  +  +GG + L +  N  +P + KPN+VL++  A S+NP+D  MRSGYGR++     
Sbjct: 2   KAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKR 61

Query: 85  --------EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLS 136
                       PL LGRD SG V  +G+ V+S  +G EV+GA+ P   +GT+A+Y V+ 
Sbjct: 62  KPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP-WSQGTHAEYVVVP 120

Query: 137 EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRLLVLGGGGAVGFAAV 192
           E+E++ KP +++H +A+++P+A LTAW AL     ++     G+R+L+LGG G VG  A+
Sbjct: 121 ENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAI 180

Query: 193 QFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAPET 250
           Q   A G HV+ TC + +I  V + GA+  +DY+++D E  +   GKFD +LDT+G  +T
Sbjct: 181 QLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVG-GDT 239

Query: 251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY 310
           E+  L  LK+GG Y+TL        D  GL  G+  +   LLKK +++    G  Y + +
Sbjct: 240 EKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKS-LLKGSHYRWGF 298

Query: 311 MRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHE-AKDKRLIPGKVV 360
                  L+E+ +L E GK+K  +DK F   +V EA+E  +      GK V
Sbjct: 299 FSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHAR-GKTV 348

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  255 bits (654), Expect = 3e-83
 Identities = 117/334 (35%), Positives = 171/334 (51%), Gaps = 19/334 (5%)

Query: 32  VVLPRFGGPEVLEVR-PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
           VV  R+G PEVL +    V +P  KP EVLV+  A S+NP+D ++R G  + +     P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHA 150
           I G D +GEV AVG+ V    VG EVFG L P    G  A+Y V  E  L  KP  V+  
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKG-GGALAEYVVAPESGLAKKPEGVSFE 119

Query: 151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
           +A+A+P A LTA +AL+ A ++  GQR+L+ G  G VG  AVQ + A G HV+  C +++
Sbjct: 120 EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTRN 179

Query: 211 IDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPETERLG-LNFLKRGGHYMTL 267
            + V + GA++ +DY+++D      G  K+D + D +G            LK GG Y+++
Sbjct: 180 AELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSV 239

Query: 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSET 327
            G  + L     L L L   T     +R            +   + +AE LE++  L E 
Sbjct: 240 GGGPSGLL----LVLLLLPLTLGGGGRR----------LKFFLAKPNAEDLEQLAELVEE 285

Query: 328 GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
           GKLK  +D  + +    EA+         GKVV+
Sbjct: 286 GKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  212 bits (543), Expect = 1e-66
 Identities = 113/355 (31%), Positives = 165/355 (46%), Gaps = 51/355 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+VL  FGGPEV E+R  V  P   P +VLVR  A  +NPLDT++R G       P LP
Sbjct: 2   KALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR---GTYADYAVLSEDELTPKPVS 146
            ILG D++G V AVG  V    VG EV+G      +    G+ A+YAV+    L  KP +
Sbjct: 59  AILGCDVAGVVEAVGEGVTRFRVGDEVYGC--AGGLGGLQGSLAEYAVVDARLLALKPAN 116

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           ++  +A+A+P   +TAW  L   A +  GQ +L+ GG G VG  AVQ + A+G  V AT 
Sbjct: 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATA 176

Query: 207 GSKSIDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRG 261
            S+      + GA+  + Y  + +   +     G+ FD V DT+G    +      +   
Sbjct: 177 SSEKAAFARSLGAD-PIIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDAS-FEAVALY 234

Query: 262 GHYMTLHGETAALADHYGLALGLPIATTVL--LKKRMQTWYSYGIDYSYIYMRAD----- 314
           G  +++                L  AT  L  L  R  T       YS ++         
Sbjct: 235 GRVVSI----------------LGGATHDLAPLSFRNAT-------YSGVFTLLPLLTGE 271

Query: 315 -----AEGLEEIRRLSETGKLKIPVD-KTFHMTQVREAHEAKDKRLIPGKVVLEF 363
                 E L E  RL E G+L+  +D +TF + +   AH   +     GK+V++ 
Sbjct: 272 GRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  209 bits (535), Expect = 2e-65
 Identities = 116/342 (33%), Positives = 165/342 (48%), Gaps = 25/342 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AVV+  FGGPEVL+V   V  P+  P EVLVR +A  +NP+D  +R G    +    LP
Sbjct: 2   KAVVVEEFGGPEVLKVVE-VPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRP--LP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
            I G + +G V AVG+ V    VG  V  AL      G YA+Y V+  D L P P  ++ 
Sbjct: 59  FIPGSEAAGVVVAVGSGVTGFKVGDRVA-ALGGVGRDGGYAEYVVVPADWLVPLPDGLSF 117

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGS 208
            +A+A+P A LTAW AL   A +  G+ +LV G  G VG AA+Q + A G   V+    S
Sbjct: 118 EEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS 177

Query: 209 KSIDRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
           + ++ +   GA+  ++Y  +D      EL      D VLDT+G  +T    L  L  GG 
Sbjct: 178 EKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPGGR 236

Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
            ++            G   G P     LL    +     G+        A AE L E+  
Sbjct: 237 LVS-----------IGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFD 285

Query: 324 LSETGKLKIPVDKTFHMTQV--REAHEAKDKRLIPGKVVLEF 363
           L  +GKLK  +D+ + + +     AH   ++R   GKVVL+ 
Sbjct: 286 LLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTT-GKVVLKV 326

Length = 326

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  187 bits (477), Expect = 2e-56
 Identities = 119/372 (31%), Positives = 166/372 (44%), Gaps = 73/372 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AVV+   GGPEVLE   ++  P+  P+EVLVR +A ++N LD  +R G      +  LP
Sbjct: 2   KAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRG--MPGIKLPLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHP-------------------------TA 124
            ILG D +G V AVG  V ++  GQ V   ++P                           
Sbjct: 59  HILGSDGAGVVEAVGPGVTNVKPGQRV--VIYPGISCGRCEYCLAGRENLCAQYGILGEH 116

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG 184
           V G YA+Y  +    L P P +++  +A+A P   LTAW  L   AR+  G+ +LV G G
Sbjct: 117 VDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAG 176

Query: 185 GAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDI-----ELAIKGKF 238
             VG AA+Q +   G  V AT GS+  ++R    GA+  +DY  +D      EL  K   
Sbjct: 177 SGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGV 236

Query: 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT 298
           D V++ +GA  T    L  L RGG  +T            G       AT         T
Sbjct: 237 DVVVEHVGA-ATWEKSLKSLARGGRLVT-----------CG-------AT---------T 268

Query: 299 WYSYGIDYSYIYMR---------ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEA 349
            Y   ID  +++ R              L+E  RL   GKLK  +D  F + +  EAH  
Sbjct: 269 GYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRR 328

Query: 350 KDKRLIPGKVVL 361
            + R   GK+VL
Sbjct: 329 LESREQFGKIVL 340

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  184 bits (470), Expect = 1e-55
 Identities = 105/343 (30%), Positives = 154/343 (44%), Gaps = 32/343 (9%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RA+    FG P+VL +  ++ VP   P EVLVR  A  +NP+DT +R+G Y      P +
Sbjct: 2   RAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYV 60

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSV 147
           P   G D +G V AVG  V  L VG  V+        R GT A+Y V+  D+L P P  V
Sbjct: 61  P---GSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGV 117

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +    +A+   ALTA+RAL   A    G+ +LV GG GAVG AAVQ +  +G  V AT  
Sbjct: 118 SFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATAS 177

Query: 208 S-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG 261
           S +  + V  AGA+   +Y ++D+   I         D +++ +      +  L+ L  G
Sbjct: 178 SAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKD-LDVLAPG 236

Query: 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEI 321
           G  +                  +PI    L+ K         I    +Y     E     
Sbjct: 237 GRIVVYGSGGLRGT--------IPINP--LMAK------EASIRGVLLYTATPEERAAAA 280

Query: 322 RRLS---ETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
             ++     G L+  + + + + +   AHEA +     GKVVL
Sbjct: 281 EAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVL 323

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  183 bits (466), Expect = 6e-55
 Identities = 82/258 (31%), Positives = 123/258 (47%), Gaps = 26/258 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL   GG  ++ V  +V VP   P+EVLV+ +AV++NP+D + +       F P  P
Sbjct: 2   KAAVLTGPGGGLLVVV--DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYG----FIPSYP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR----GTYADYAVLSEDELTPKPV 145
            ILG D +G V  VG+ V    VG  V G +H         G + +Y V   D     P 
Sbjct: 56  AILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPD 115

Query: 146 SVTHADASAIPFAALTAWRAL----------KCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
           +++  +A+ +P   +TA  AL             +  S+G+ +L+ GG  +VG  A+Q +
Sbjct: 116 NISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLA 175

Query: 196 VASGCHVSATCGSKSIDRVLAAGAEQAVDYSS----KDIELAIKGKFDAVLDTIGAPETE 251
             +G  V  T   K+ D V + GA+   DY      +DI  A  GK    LD I  PE+ 
Sbjct: 176 KLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESA 235

Query: 252 RLGLNFLKR--GGHYMTL 267
           +L    L R  GG  ++L
Sbjct: 236 QLCAEALGRSGGGKLVSL 253

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  182 bits (465), Expect = 6e-55
 Identities = 107/350 (30%), Positives = 158/350 (45%), Gaps = 46/350 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A+V+   GGPEVLE+   V  P   P EVL+R  A  +N  D   R G Y      P  
Sbjct: 2   KAIVIKEPGGPEVLELGE-VPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY------PPP 54

Query: 89  P---LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
           P    ILG +++G V AVG  V    VG  V   L      G YA+Y V+   +L P P 
Sbjct: 55  PGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAG----GGYAEYVVVPAGQLLPVPE 110

Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT 205
            ++  +A+A+P    TAW+ L     +  G+ +L+ GG   VG AA+Q + A G  V AT
Sbjct: 111 GLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIAT 170

Query: 206 CGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKF-----DAVLDTIGAPETERLGLNFLK 259
            GS+  ++   A GA+ A++Y ++D    +K        D +LD +G     R  L  L 
Sbjct: 171 AGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARN-LRALA 229

Query: 260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ----TWYSYGIDYSYIYMRADA 315
             G  + +      L    G    L +A   LL+KR+     T  S  ++         A
Sbjct: 230 PDGRLVLI----GLLG---GAKAELDLAP--LLRKRLTLTGSTLRSRSLEEK-------A 273

Query: 316 EGLEEIRR----LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
                 R     L  +G+++  +DK F + +  EAH   +     GK+VL
Sbjct: 274 ALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  177 bits (450), Expect = 2e-53
 Identities = 74/236 (31%), Positives = 108/236 (45%), Gaps = 27/236 (11%)

Query: 58  EVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVF 117
           EVLVR  A  +   D  +R G       P LPLILG + +G V  VG  V  + VG  V 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVV 58

Query: 118 GALHP-------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA 158
              +                      + G +A+Y V+  D L P P  ++  +A+ +P  
Sbjct: 59  VLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEP 118

Query: 159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA 217
             TA+ AL+ A  +  G  +LVLG GG VG  A Q + A+G  V  T  S   ++     
Sbjct: 119 LATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKEL 177

Query: 218 GAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG 269
           GA+  +DY  +D+E  ++    G  D V+D +G PET    L  L+ GG  + + G
Sbjct: 178 GADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGG 233

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  169 bits (431), Expect = 7e-50
 Identities = 103/346 (29%), Positives = 148/346 (42%), Gaps = 33/346 (9%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAV   +FGGPEVL +   + VP     EVL+R  A+ +N  D   R G    I  P LP
Sbjct: 2   RAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRG--AYIEPPPLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFG-ALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
             LG + +G V AVGA V    VG  V           GTYA+YA++    +   P  ++
Sbjct: 59  ARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLS 118

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-G 207
             +A+A+    LTA+ AL   A +  G  +L+     +VG AA+Q + A+G  V AT   
Sbjct: 119 FVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRT 178

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLG--LNFLKR 260
           S+  D +LA GA   +    +D+   +     GK  D V D +G P+  +L   L     
Sbjct: 179 SEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGT 238

Query: 261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE 320
              Y  L GE              P+   +   K+  T+      YS   +  D E    
Sbjct: 239 LVVYGALSGEPT----------PFPLKAAL---KKSLTFRG----YSLDEITLDPEARRR 281

Query: 321 IRR----LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
                     +G LK  VD+ F    + EAH   +     GK+V+ 
Sbjct: 282 AIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  164 bits (418), Expect = 7e-48
 Identities = 98/340 (28%), Positives = 151/340 (44%), Gaps = 17/340 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           R VV+ R GGPEVL+V    ++P+    EV+V+  A  ++  D +MR G      +P LP
Sbjct: 2   REVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRG--LYPDQPPLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
              G D+ G V A+G+ V    VG  V  AL      G  A+Y  L    L P P  V  
Sbjct: 59  FTPGYDLVGRVDALGSGVTGFEVGDRV-AALTRV---GGNAEYINLDAKYLVPVPEGVDA 114

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
           A+A  +    +TA++ L  AA++  GQR+L+ G  G VG A ++ ++ +G  V  T   +
Sbjct: 115 AEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTASER 174

Query: 210 SIDRVLAAGAEQAVDYSSKDIELA--IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
           +   +   GA   +DY +KD   A    G  D V D +G    E      L  GG  +  
Sbjct: 175 NHAALRELGAT-PIDYRTKDWLPAMLTPGGVDVVFDGVGGESYEE-SYAALAPGGT-LVC 231

Query: 268 HGETAALADHYGLALGLPIATTVLLKKR----MQTWYSYGIDYSYIYMRAD-AEGLEEIR 322
           +G  ++L         L      L K +     +    Y +            + L E+ 
Sbjct: 232 YGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELL 291

Query: 323 RLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            L   GK++  + K   +++V EAH   +   + GK+VL 
Sbjct: 292 DLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVLL 331

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  163 bits (415), Expect = 1e-47
 Identities = 109/350 (31%), Positives = 161/350 (46%), Gaps = 40/350 (11%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            +A VLP+ G    L +   +E+P     EVLV+  A  +NP+D +    +G   +    
Sbjct: 1   MKAWVLPKPGAALQLTLEE-IEIPGPGAGEVLVKVHAAGLNPVDWK-VIAWGPPAWSY-- 56

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSV 147
           P + G D +G V AVGA V    VG  V  A H +  R G++A+Y V+    + P P S+
Sbjct: 57  PHVPGVDGAGVVVAVGAKVTGWKVGDRV--AYHASLARGGSFAEYTVVDARAVLPLPDSL 114

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +  +A+A+P A LTA++AL    R+  G+ +L+ GG G VG  AVQ +  +G  V  TC 
Sbjct: 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCS 174

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKG-----KFDAVLDTIGAPETERLGLNFLKRGG 262
            ++ + V + GA+  +DY+ +D+   IK        DAVLDT+G      L    L   G
Sbjct: 175 KRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAAL-APTLAFNG 233

Query: 263 HYMTLHGE---------TAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA 313
           H + + G          T AL+ H  +ALG   A         Q     G          
Sbjct: 234 HLVCIQGRPDASPDPPFTRALSVHE-VALGA--AHDHGDPAAWQDLRYAG---------- 280

Query: 314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
                EE+  L   GKL+  V +     Q+ EA  A   R   GK+V+  
Sbjct: 281 -----EELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  162 bits (412), Expect = 5e-47
 Identities = 106/346 (30%), Positives = 148/346 (42%), Gaps = 37/346 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +AVV    GGPE L +      P   P EV +R  A  +N  D  M  G Y     +P L
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGA-PGEVRIRVEAAGVNFPDLLMIQGKYQ---VKPPL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P + G +++G V AVG  V    VG  V         +G +A+  V+    + P P  ++
Sbjct: 58  PFVPGSEVAGVVEAVGEGVTGFKVGDRVVAL----TGQGGFAEEVVVPAAAVFPLPDGLS 113

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
             +A+A+P    TA+ AL   AR+  G+ +LVLG  G VG AAVQ + A G  V A   S
Sbjct: 114 FEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASS 173

Query: 209 -KSIDRVLAAGAEQAVDYSSKDIELAIKGKF-----DAVLDTIGAPETERLGLNFLKRGG 262
            + +    A GA+  +DY   D+   +K        D V D +G    E   L  L  GG
Sbjct: 174 EEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEA-SLRSLAWGG 232

Query: 263 HYMTLHGETAALADHYGLALGLP--IATTVLLKKRMQTWYSYGIDYSYIYMRAD----AE 316
             + +           G A G    I   +LL K +      G+ +   Y R +      
Sbjct: 233 RLLVI-----------GFASGEIPQIPANLLLLKNISV---VGVYWGA-YARREPELLRA 277

Query: 317 GLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            L E+  L   GK++  V   F + Q  EA  A   R   GKVVL 
Sbjct: 278 NLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  155 bits (395), Expect = 2e-44
 Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 35/338 (10%)

Query: 52  PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS-L 110
              K NE++V+  A ++NP+D ++ + Y       +    LGRD SG +  VG++V S  
Sbjct: 24  NCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFK--VKEKGLGRDYSGVIVKVGSNVASEW 81

Query: 111 TVGQEVFGA-LHPTAVRGTYADYAVL----SEDELTPKPVSVTHADASAIPFAALTAWRA 165
            VG EV G   HP   +GT + Y ++     +  +T KP +++  +A+A P    TA++ 
Sbjct: 82  KVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQI 141

Query: 166 L-KCAARMSEGQRLLVLGGGGAVGFAAVQ-----FSVASGCHVSATCGSKSIDRVLAAGA 219
           L     ++    ++LVLGG  +VG  A+Q     +++ +   V  TC S+S +     GA
Sbjct: 142 LEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGT---VVGTCSSRSAELNKKLGA 198

Query: 220 EQAVDYSSKDIELAIK---------GKFDAVLDTIGA----PETERLGLNFLKRGGHYMT 266
           +  +DY +      +K         GKFD +LD +G     P    + L    + GHY+T
Sbjct: 199 DHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSI-LKPKSKNGHYVT 257

Query: 267 LHGETAA-LADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLS 325
           + G+  A        +   P A    L   +  W     +Y +  +  +A+ +E+   L 
Sbjct: 258 IVGDYKANYKKDTFNSWDNPSANARKLFGSLGLW---SYNYQFFLLDPNADWIEKCAELI 314

Query: 326 ETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
             GK+K P+D  +     +EA E        GKVV++ 
Sbjct: 315 ADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  154 bits (393), Expect = 3e-44
 Identities = 101/347 (29%), Positives = 151/347 (43%), Gaps = 42/347 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV + + GGPEVLE   +V VP+  P EVLVR  A+ +N +DT  RSG    ++   LP
Sbjct: 1   KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSG----LYPLPLP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
            +LG + +G V AVG  V    VG  V  A       G YA+Y V+    L   P  ++ 
Sbjct: 56  FVLGVEGAGVVEAVGPGVTGFKVGDRVAYA----GPPGAYAEYRVVPASRLVKLPDGISD 111

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
             A+A+    LTA   L+    +  G  +LV    G VG    Q++ A G  V  T  S+
Sbjct: 112 ETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSE 171

Query: 210 S-IDRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
              +   AAGA+  ++Y  +D      E+      D V D +G  +T    L+ L+  G 
Sbjct: 172 EKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPRGT 230

Query: 264 YMTLHGETAALADHYGLALGL--PIATTVLLKK-----RMQTWYSYGIDYSYIYMRAD-A 315
            ++           +G A G   P     L K      R   +        YI  R +  
Sbjct: 231 LVS-----------FGNASGPVPPFDLLRLSKGSLFLTRPSLF-------HYIATREELL 272

Query: 316 EGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
               E+     +GKLK+ + K + +    +AH   + R   GK++L 
Sbjct: 273 ARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLI 319

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  155 bits (393), Expect = 3e-44
 Identities = 98/354 (27%), Positives = 150/354 (42%), Gaps = 41/354 (11%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAVVL  FGG + L+V     +P+    EV VR  A  +N  D   R G   S   P  P
Sbjct: 1   RAVVLTGFGGLDKLKVEKE-ALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
            + G + +G V AVG  V+   VG  V G        G YA+   +  D++ P P  ++ 
Sbjct: 58  FVPGFECAGTVEAVGEGVKDFKVGDRVMG----LTRFGGYAEVVNVPADQVFPLPDGMSF 113

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQF-SVASGCHVSATCGS 208
            +A+A P   LTA+ AL     +  GQ +LV    G VG AA Q         V  T  +
Sbjct: 114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTASA 173

Query: 209 KSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHY 264
              + +   G    +DY ++D    +K       D VLD +G  +T +   + LK  G  
Sbjct: 174 SKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRK-SYDLLKPMGRL 232

Query: 265 MT------LHGET---AALADHY-----GLALGLPIATTVLLKKRMQTWYSYGIDYSYIY 310
           +       + GE      LA  +        + L      +L          G +  +++
Sbjct: 233 VVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVL----------GFNLGWLF 282

Query: 311 MRAD--AEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEA-KDKRLIPGKVVL 361
              +   E ++++ +L E GK+K  +D  F   +V EA    + ++ I GKVVL
Sbjct: 283 EERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNI-GKVVL 335

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  144 bits (365), Expect = 4e-40
 Identities = 102/359 (28%), Positives = 153/359 (42%), Gaps = 49/359 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A  L   GG + L++     VP+  P EVLVR  AVS+N  D  + +G Y         
Sbjct: 2   KAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP---PPVKD 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTY-----------------AD 131
           PLI   D +GEV AVG  V    VG  V     P  + G                   A+
Sbjct: 58  PLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAE 117

Query: 132 YAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAA 191
           Y VL E+ L   P  ++  +A+ +P A LTAW AL     +  G  +LV G GG V   A
Sbjct: 118 YVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFA 176

Query: 192 VQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSK-DIELAIK----GK-FDAVLDT 244
           +QF+ A+G  V AT  S   ++R  A GA+  ++Y +  D    +     G+  D V++ 
Sbjct: 177 LQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEV 236

Query: 245 IGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
            G     +  +  +  GG  ++L G    L+         P+    LL K        GI
Sbjct: 237 GGPGTLAQ-SIKAVAPGGV-ISLIG---FLS-----GFEAPVLLLPLLTKGATL---RGI 283

Query: 305 DYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
               +  RA     E + R  E  +++  +D+ F   + +EA+   +     GKVV+  
Sbjct: 284 ---AVGSRAQ---FEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  142 bits (359), Expect = 2e-39
 Identities = 96/349 (27%), Positives = 145/349 (41%), Gaps = 42/349 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+ +   GGPEVL +   V +P  K  EVL+R  A  +N  D   R+G       P  P
Sbjct: 2   KAIEITEPGGPEVLVLVE-VPLPVPKAGEVLIRVAAAGVNRPDLLQRAG-----KYPPPP 55

Query: 90  ---LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
               ILG +++GEV AVG  V    VG  V   +      G YA+Y  +   ++ P P  
Sbjct: 56  GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV----AGGGYAEYVAVPAGQVLPVPEG 111

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           ++  +A+A+P    T W  L     +  G+ +L+ GG   +G  A+Q + A G  V  T 
Sbjct: 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTA 171

Query: 207 GSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKR 260
           GS        A GA+ A++Y  +D    +K        D +LD +G     R  +  L  
Sbjct: 172 GSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNR-NIKALAL 230

Query: 261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE 320
            G  + +           G    L +    LL KR+       I  S +  R  AE    
Sbjct: 231 DGRIVQI----GFQG---GRKAELDLGP--LLAKRLT------ITGSTLRARPVAEKAAI 275

Query: 321 IRRLSET-------GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
              L E        G+++  +DK F +    +AH   +     GK+VL 
Sbjct: 276 AAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLT 324

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  138 bits (351), Expect = 3e-38
 Identities = 100/339 (29%), Positives = 158/339 (46%), Gaps = 30/339 (8%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V+ + GGPEVL++R  + +P+ KP  VL+R +A  +N  +   R G+  S+     P
Sbjct: 2   KAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV---KFP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF---GALHPTAVRGTYADYAVLSEDELTPKPVS 146
            +LG +  GEV    A   + T GQ V    G +  T   G+YA+Y ++  +++      
Sbjct: 58  RVLGIEAVGEVEE--APGGTFTPGQRVATAMGGMGRT-FDGSYAEYTLVPNEQVYAIDSD 114

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           ++ A+ +A+P    TAW +L  +  +  G  LL+ GG  +VG AA++ + A G  V+AT 
Sbjct: 115 LSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATT 174

Query: 207 GSKS-IDRVLAAGAEQA-VDYSSKDIEL-AIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
            S      +   GA++  +D  +   +L A  G FD VL+ +G   T +  L  L+ GG 
Sbjct: 175 RSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGGI 233

Query: 264 Y-MT-LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEI 321
             MT L G    L D   +     I + V L          G     +        L+E+
Sbjct: 234 VCMTGLLGGQWTLEDFNPMDD---IPSGVNL-------TLTGSSSGDV----PQTPLQEL 279

Query: 322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV 360
                 G L IP  K F   ++ EAH   +     GKVV
Sbjct: 280 FDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVV 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  136 bits (345), Expect = 4e-37
 Identities = 98/371 (26%), Positives = 145/371 (39%), Gaps = 63/371 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL- 87
           RAV+L   GG + L  R +V VP   P EVL+R  A  +N  D   R G Y   +     
Sbjct: 2   RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATD 61

Query: 88  ---------------LPLILGRDISGEVAAVGASVRSLTVGQEV---FGALHPTAVR--- 126
                           P I G DI G V AVG  V +  +G+ V        P       
Sbjct: 62  STGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD 121

Query: 127 ---------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQR 177
                    G +A+Y V+  +   P    ++  + +  P +  TA   L+  A +  G+ 
Sbjct: 122 IDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLE-RAGVGAGET 180

Query: 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAI--- 234
           +LV G  G VG A VQ +   G  V A  G+   + V A GA+  +   +  +  A    
Sbjct: 181 VLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKALG 240

Query: 235 KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA----TTV 290
               D V D +G P    L L  L+ GG Y+T              A+  P+      T+
Sbjct: 241 GEPVDVVADVVGGPLFPDL-LRLLRPGGRYVT------------AGAIAGPVVELDLRTL 287

Query: 291 LLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAK 350
            LK       + G            E    + R  E G+++  V KTF ++++REA    
Sbjct: 288 YLKDLTLFGSTLGTR----------EVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEF 337

Query: 351 DKRLIPGKVVL 361
            ++   GK+VL
Sbjct: 338 LEKRHVGKLVL 348

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  135 bits (343), Expect = 6e-37
 Identities = 102/362 (28%), Positives = 157/362 (43%), Gaps = 55/362 (15%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL +FG P  +E    V VP+  P EVL++  A  +   D  +  G       P LP
Sbjct: 5   KAAVLKKFGQPLEIE---EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWP---VPKLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------V 125
           LI G +I G V  VG  V  L VG  V       +                         
Sbjct: 59  LIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTT 118

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
            G YA+Y V+    +   P  +  A+A+ +  A +T +RALK  A +  G+ + V+G GG
Sbjct: 119 DGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALK-KANVKPGKWVAVVGAGG 177

Query: 186 AVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT 244
            +G  AVQ++ A G  V A T   + ++     GA+  ++ S  D   A+K   DA++DT
Sbjct: 178 -LGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDT 236

Query: 245 IGAPETERLGLNFLKRGGHYMT--LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY 302
           +G    E   L  L+RGG  +   L G          L         ++LK+        
Sbjct: 237 VGPATLEPS-LKALRRGGTLVLVGLPGGGPIPLLPAFL---------LILKEIS------ 280

Query: 303 GIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            I  S +  RAD   LEE    +  GK+K  + +T  + ++ EA+E  +K  + G+ V++
Sbjct: 281 -IVGSLVGTRAD---LEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVID 336

Query: 363 FD 364
             
Sbjct: 337 MS 338

Length = 339

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  121 bits (305), Expect = 1e-31
 Identities = 103/343 (30%), Positives = 147/343 (42%), Gaps = 31/343 (9%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           RA+ L  FG PEVL      +VPD  P   +V +   A  ++ +DT++RSG+G   F P 
Sbjct: 2   RAIRLHEFGPPEVLVPE---DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPE 58

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP + G +++G V AVG  V    +G+ V          G YA+ AV   D L P P  +
Sbjct: 59  LPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAG--GGYAELAVADVDSLHPVPDGL 116

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV-SATC 206
               A A+     TA   L   A ++ G  +LV    G +G   VQ + A+G  V  A  
Sbjct: 117 DLEAAVAVVHDGRTALGLLD-LATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAG 175

Query: 207 GSKSIDRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
           G      V A GA+ AVDY+  D      E    G    VLD +G     R  L  L  G
Sbjct: 176 GPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG 234

Query: 262 GHYMTLHGETAALADHYGLALGL--PIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE 319
           G ++T           YG A G    +      ++ +      G+      +RA      
Sbjct: 235 GRFLT-----------YGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEA--R 281

Query: 320 EIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            +   +  G+L   V +TF + +  EAH A + R   GKV+L 
Sbjct: 282 ALAEAAA-GRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLL 323

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  120 bits (304), Expect = 2e-31
 Identities = 92/356 (25%), Positives = 142/356 (39%), Gaps = 54/356 (15%)

Query: 36  RFGGPEV-LEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGR 94
           RF      L V   V VP+  P EVLV+ +A  +   D  +  G   ++ +   PL LG 
Sbjct: 5   RFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKL--PLTLGH 62

Query: 95  DISGEVAAVGASVRSLTVGQEV--FGALHPTAVR---------------------GTYAD 131
           +I+G V  VGA V +  VG  V     +   A                       G +A+
Sbjct: 63  EIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAE 122

Query: 132 YAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAA 191
           Y V+    L P P  V  A A+    A LT + A+  A  +  G+ +LV+G GG +G  A
Sbjct: 123 YIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGG-LGLNA 181

Query: 192 VQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVD----YSSKDIELAIKGKFDAVLDTIG 246
           VQ + A G  V A    +   +     GA++ ++             + G FD + D +G
Sbjct: 182 VQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVG 241

Query: 247 APETERLGLNFLKRGGHYMTLHGETAALADHYGL-ALGLPIATTVLLKKRMQTWYSYGID 305
              T       +K GG  + +           GL    L +  + L+ + ++   S+G  
Sbjct: 242 TQPTFEDAQKAVKPGGRIVVV-----------GLGRDKLTVDLSDLIARELRIIGSFG-- 288

Query: 306 YSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
                     E L E+  L   GKL   V+ T  + ++ E  E   K  + G+VVL
Sbjct: 289 -------GTPEDLPEVLDLIAKGKLDPQVE-TRPLDEIPEVLERLHKGKVKGRVVL 336

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  120 bits (302), Expect = 3e-31
 Identities = 97/344 (28%), Positives = 144/344 (41%), Gaps = 34/344 (9%)

Query: 32  VVLPRFGGPE--VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           VV  +FG P   VLE+   + +P   P EVLVR  A  INP D    SG YG     P L
Sbjct: 1   VVYTQFGEPLPLVLELVS-LPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSR---PPL 56

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P + G +  G V  VG+ V  L VGQ V     P    GT+ +Y V   D+L P P S++
Sbjct: 57  PAVPGNEGVGVVVEVGSGVSGLLVGQRVL----PLGGEGTWQEYVVAPADDLIPVPDSIS 112

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA-TCG 207
              A+ +    LTAW  L    ++  G  ++      AVG   +Q +   G         
Sbjct: 113 DEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRR 172

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG 262
            + ++ + A GA++ +D S +D+   +K           LD +G     RL  + L+ GG
Sbjct: 173 DEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARS-LRPGG 231

Query: 263 HYMTLHGETAALADHYGLALGLPIATTVLL----KKRMQTWYSYGIDYSYIYMRADAEGL 318
             +           +YGL  G P+     +       ++ ++            A  E  
Sbjct: 232 TLV-----------NYGLLSGEPVPFPRSVFIFKDITVRGFWLRQ-WLHSATKEAKQETF 279

Query: 319 EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            E+ +L E G L  PV   F +    EA  A ++    GKV+L 
Sbjct: 280 AEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 3e-31
 Identities = 102/359 (28%), Positives = 151/359 (42%), Gaps = 58/359 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-----GRSIF 84
           RAV L  FGG +VL++      P  K N+VL++  A  +N  DT  R G      G S  
Sbjct: 3   RAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSS-- 59

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
                 ILG +++G V  VG+ V+    G  V   L      G YA+YAV  +  +   P
Sbjct: 60  -----EILGLEVAGYVEDVGSDVKRFKEGDRVMALLPG----GGYAEYAVAHKGHVMHIP 110

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
              T  +A+AIP A LTAW+ LK    + +GQ +L+  G   VG AA Q +   G     
Sbjct: 111 QGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATII 170

Query: 205 TCGSKS-IDRVLAAGAEQAVDY------SSKDIELAIKGKFDAVLDTIGAPETERLGLNF 257
           T  S+  +D      A   + Y      + K  +L  +   + VLD +            
Sbjct: 171 TTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCV------------ 218

Query: 258 LKRGGHYMTLHGETAALADH---YGLALGLPIAT---TVLLKKRMQTWYSYGIDYSYIYM 311
              GG Y++   E  A+      YG   G  +       LL+KR        I +S +  
Sbjct: 219 ---GGSYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRAS------IIFSTLRS 269

Query: 312 RADAEGLEEIRRLSET-------GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
           R+D    + +             G++K  VD+T+ + +V EAH   ++    GKVVL  
Sbjct: 270 RSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTV 328

Length = 334

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  118 bits (298), Expect = 7e-31
 Identities = 91/321 (28%), Positives = 141/321 (43%), Gaps = 27/321 (8%)

Query: 50  EVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109
           EV    P EV ++ RA S+N  D     G   ++  P  P   G + SG V AVG  V  
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTM--PPYPFTPGFEASGVVRAVGPHVTR 58

Query: 110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA 169
           L VG EV      +   G +A    + ED++  KP S++  +A A+P   LT   A    
Sbjct: 59  LAVGDEVIAGTGESM--GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-R 115

Query: 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA-GAEQAVDYSSK 228
           A +++G+ +L+    G  G  AVQ +   G  + AT  S      L   G    ++Y  +
Sbjct: 116 AGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEE 175

Query: 229 DIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALG 283
           D E  I     G+  D V++T+ + E  + GLN L  GG Y+        +A    L   
Sbjct: 176 DFEEEIMRLTGGRGVDVVINTL-SGEAIQKGLNCLAPGGRYV-------EIAMT-ALKSA 226

Query: 284 LPIATTVLLKKRMQTWYSYGIDYSYIYMRAD---AEGLEEIRRLSETGKLKIPVDKTFHM 340
             +  +VL     Q+++S  +D   + +      A+   E+  L E G+L+  V + F  
Sbjct: 227 PSVDLSVLSNN--QSFHS--VDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPF 282

Query: 341 TQVREAHEAKDKRLIPGKVVL 361
             + EA+     R   GKVV+
Sbjct: 283 DDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  117 bits (296), Expect = 2e-30
 Identities = 92/356 (25%), Positives = 143/356 (40%), Gaps = 50/356 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A +L +   P  +E    V  P+  P EVL++ +A  +   D     G+         P
Sbjct: 2   KAAILHKPNKPLQIE---EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG---KYP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFG-----------------------ALHPTAVR 126
           LILG +I G V  VG  V     G  V                         A +   V 
Sbjct: 56  LILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVD 115

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA 186
           G +A+Y  + E  L   P +V+   A+       TA  ALK  A + +G  +LV G GG 
Sbjct: 116 GGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK-RAGVKKGDTVLVTGAGGG 174

Query: 187 VGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTI 245
           VG  A+Q + A G  V A   S   +  +   GA+  +D S    ++   G  D V++ +
Sbjct: 175 VGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGADVVIELV 234

Query: 246 GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGID 305
           G+P  E   L  L +GG  + +   T   A        L     +L + R+         
Sbjct: 235 GSPTIEE-SLRSLNKGGRLVLIGNVTPDPAP-------LRPGLLILKEIRIIG------- 279

Query: 306 YSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
            S    +AD   +EE  +L + GK+K  +D+   +  + EA E      + G++VL
Sbjct: 280 -SISATKAD---VEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  117 bits (296), Expect = 3e-30
 Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 15/188 (7%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
            +  P     ++LVR  AVS+NP+DT++R+G       P  P ILG D SG V AVG+ V
Sbjct: 22  ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV---PGQPKILGWDASGVVEAVGSEV 78

Query: 108 RSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
               VG EV+ A   T  R G+ A+Y ++ E  +  KP S++ A+A+A+P  +LTAW AL
Sbjct: 79  TLFKVGDEVYYAGDIT--RPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEAL 136

Query: 167 -----KCAARMSEGQRLLVLGGGGAVGFAAVQFS-VASGCHVSATCGSK--SIDRVLAAG 218
                      +EG+ LL++GG G VG  A+Q +   +G  V AT  S+  SI  V   G
Sbjct: 137 FDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIAT-ASRPESIAWVKELG 195

Query: 219 AEQAVDYS 226
           A+  +++ 
Sbjct: 196 ADHVINHH 203

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  115 bits (291), Expect = 7e-30
 Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 21/217 (9%)

Query: 57  NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV 116
           +EV V  +A  +N  D  +  G       P     LG + SG V  VG+ V  L VG  V
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALG-----LLPGDETPLGLECSGIVTRVGSGVTGLKVGDRV 55

Query: 117 FGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
            G        G +A +  +    +   P S++  +A+ +P A LTA+ AL   AR+ +G+
Sbjct: 56  MGLAP-----GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGE 110

Query: 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVD--YSSKDIEL-- 232
            +L+    G VG AA+Q +   G  V AT GS+   R         VD  +SS+D+    
Sbjct: 111 SVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEE-KREFLRELGGPVDHIFSSRDLSFAD 169

Query: 233 ----AIKGK-FDAVLDTIGAPETERLGLNFLKRGGHY 264
               A  G+  D VL+++ + E  R     L   G +
Sbjct: 170 GILRATGGRGVDVVLNSL-SGELLRASWRCLAPFGRF 205

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  115 bits (289), Expect = 2e-29
 Identities = 93/360 (25%), Positives = 156/360 (43%), Gaps = 70/360 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V  + G  E L+V  +V+ P   P EVL+R +   +NP+D  + +       +P+ P
Sbjct: 2   KALVFEKSG-IENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK---VKPM-P 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF-----------------------GALHPTAVR 126
            I G + +G V  VG  V+ +  G  V                        G +      
Sbjct: 56  HIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSN 115

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA 186
           G YA+Y V+ E  L   P S++   A+++P AALTA+ ALK  A +  G+ ++V G  G 
Sbjct: 116 GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGN 174

Query: 187 VGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA-IKGKFDAVLDTI 245
            G  AVQ +   G  V A      +      GA++ VDY   + ++  I    D V++++
Sbjct: 175 TGIFAVQLAKMMGAEVIAVSRKDWLKE---FGADEVVDYDEVEEKVKEITKMADVVINSL 231

Query: 246 GAPETERLGLNFLKRGGHYMTLHGETAA-----LADHYGLALGLPIATTVLLKKRMQTWY 300
           G+   + L L+ L RGG  +T    T       L+D Y   + + I +T           
Sbjct: 232 GSSFWD-LSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISI-IGST----------- 278

Query: 301 SYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREA-----HEAKDKRLI 355
                          + L E+ +++    LK+ V KTF + + +EA      + +D R++
Sbjct: 279 -----------GGTRKELLELVKIA--KDLKVKVWKTFKLEEAKEALKELFSKERDGRIL 325

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  108 bits (272), Expect = 8e-27
 Identities = 95/364 (26%), Positives = 150/364 (41%), Gaps = 59/364 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A  L  +G P  LE   +V VP+  P +VLVR     +   D  +  G    I    LP
Sbjct: 2   KAARLYEYGKPLRLE---DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGT--------------------- 128
             LG + +G V  VG+ V  L  G  V   +HP    GT                     
Sbjct: 59  FTLGHENAGWVEEVGSGVDGLKEGDPV--VVHPPWGCGTCRYCRRGEENYCENARFPGIG 116

Query: 129 ----YADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAAR-MSEGQRLLVLGG 183
               +A+Y ++    L   P  +   +A+ +  A LTA+ A+K A   +  G  ++V+G 
Sbjct: 117 TDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV 176

Query: 184 GGAVGFAAVQFSVA-SGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GK 237
           GG +G  AVQ   A +   V A     +++      GA+  ++ S   +E   +      
Sbjct: 177 GG-LGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRG 235

Query: 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ 297
            DAV+D +G+ ET  L    L +GG Y  + G        YG    LP +  V  +  + 
Sbjct: 236 ADAVIDFVGSDETLALAAKLLAKGGRY-VIVG--------YGGHGRLPTSDLVPTEISVI 286

Query: 298 TWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPG 357
                    S    RA+   L E+  L+E+GK+K+ +   F +    EA +   +  + G
Sbjct: 287 G--------SLWGTRAE---LVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTG 334

Query: 358 KVVL 361
           + VL
Sbjct: 335 RAVL 338

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  104 bits (261), Expect = 1e-25
 Identities = 79/283 (27%), Positives = 118/283 (41%), Gaps = 34/283 (12%)

Query: 92  LGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD 151
           LG + +G V  VG  V  L VG  V G        G +A   V     + P P   +  +
Sbjct: 26  LGGECAGVVTRVGPGVTGLAVGDRVMGL-----APGAFATRVVTDARLVVPIPDGWSFEE 80

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS- 210
           A+ +P   LTA+ AL   AR+  G+ +L+    G VG AA+Q +   G  V AT GS   
Sbjct: 81  AATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEK 140

Query: 211 IDRVLAAGAEQAVDYSSKD------IELAIKGK-FDAVLDTIGAPETERLGLNFLKRGGH 263
            D + A G      +SS+D      I  A  G+  D VL+++ + E     L  L  GG 
Sbjct: 141 RDFLRALGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSL-SGEFLDASLRCLAPGGR 199

Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY-GIDYSYIYMRAD--AEGLEE 320
           ++ + G+     +         +A             SY  +D   +    D   E L E
Sbjct: 200 FVEI-GKRDIRDNS-------QLAMAPFRPNV-----SYHAVDLDALEEGPDRIRELLAE 246

Query: 321 IRRLSETGKLK-IPVDKTFHMTQVREAHEA-KDKRLIPGKVVL 361
           +  L   G L+ +PV   F ++   +A    +  + I GKVVL
Sbjct: 247 VLELFAEGVLRPLPV-TVFPISDAEDAFRYMQQGKHI-GKVVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  101 bits (254), Expect = 2e-24
 Identities = 97/357 (27%), Positives = 145/357 (40%), Gaps = 52/357 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+   GGP  LE    V VP+  P EVL++  A  +   D     G          P
Sbjct: 1   KAAVVHAAGGP--LEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDW---GGSKYP 54

Query: 90  LILGRDISGEVAAVGASVRSLTVGQ---------------------EVFGA---LHPTAV 125
           L+ G +I GEV  VGA V    VG                      E             
Sbjct: 55  LVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTT 114

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
           +G YA+Y V   +     P  +  A A+ +  A +T + AL+ A     G+R+ VLG GG
Sbjct: 115 QGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPRP-GERVAVLGIGG 173

Query: 186 AVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT 244
            +G  AVQ++ A G    A T      +     GA++ VD  ++  E A  G  D +L T
Sbjct: 174 -LGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT 232

Query: 245 IGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           + +       L  L+RGG  + L G   +           P    +++K++        I
Sbjct: 233 VVSGAAAEAALGGLRRGGR-IVLVGLPES-------PPFSPDIFPLIMKRQS-------I 277

Query: 305 DYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
             S    RAD   L+E    +  GK+K  + +TF + Q  EA+E  +K  +  + VL
Sbjct: 278 AGSTHGGRAD---LQEALDFAAEGKVKPMI-ETFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 97.2 bits (243), Expect = 8e-23
 Identities = 98/369 (26%), Positives = 153/369 (41%), Gaps = 62/369 (16%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            +A V+  FG         +V VP+  P EVLV+  A  +   D     G      +P L
Sbjct: 1   MKAAVVEEFGEKPYEVK--DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKL 56

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV-----FGA---------LHPT----------A 124
           PLI G + +G V AVG  V  L VG  V     + A            T           
Sbjct: 57  PLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYT 116

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG 184
           V GT+A+YA+     +TP P  ++   A+ +  A +T ++ALK  A +  G  +++ G G
Sbjct: 117 VDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK-KAGLKPGDWVVISGAG 175

Query: 185 GAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKF----- 238
           G +G   VQ++ A G  V A   G + ++     GA+  VD+   D   A+K        
Sbjct: 176 GGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA 235

Query: 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGL----ALGLPIATTVLLKK 294
            AV+ T  +       L++L+ GG  + +           GL     + L     VL   
Sbjct: 236 HAVVVTAVSAAAYEQALDYLRPGGTLVCV-----------GLPPGGFIPLDPFDLVL--- 281

Query: 295 RMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRL 354
           R  T     I  S +  R D   L+E    +  GK+K  + +   +  + E  E  ++  
Sbjct: 282 RGIT-----IVGSLVGTRQD---LQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGK 332

Query: 355 IPGKVVLEF 363
           I G+VV++F
Sbjct: 333 IAGRVVVDF 341

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 96.3 bits (240), Expect = 2e-22
 Identities = 89/339 (26%), Positives = 152/339 (44%), Gaps = 51/339 (15%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108
           +  P     ++LV  +A+S+NP+DT++R+   R   E   P ILG D +G V AVG  V 
Sbjct: 22  LPKPKPGGRDLLVEVKAISVNPVDTKVRA---RMAPEAGQPKILGWDAAGVVVAVGDEVT 78

Query: 109 SLTVGQEVF--GALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA- 165
               G EV+  G +      G+ A++ ++ E  +  KP S++ A+A+A+P  ++TAW   
Sbjct: 79  LFKPGDEVWYAGDI---DRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELL 135

Query: 166 ---LKCAARMSEGQR-LLVLGGGGAVGFAAVQFSVA-SGCHVSATCG-SKSIDRVLAAGA 219
              L     ++  +R LL++GG G VG   +Q +   +G  V AT    +S + VL  GA
Sbjct: 136 FDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGA 195

Query: 220 EQAVDYSSKDIELAIKG-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHY 278
              +D+ SK ++  ++    +AV        T++          H+     E   L    
Sbjct: 196 HHVIDH-SKPLKAQLEKLGLEAVSYVFSLTHTDQ----------HF----KEIVELLAPQ 240

Query: 279 GLALGL---PIATTVLLKKRMQTWYSYGIDYSYIYMR---------ADAEGLEEIRRLSE 326
           G    L   P    +   KR     S  + + +++ R              L  + RL +
Sbjct: 241 G-RFALIDDPAELDISPFKRK----SISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVD 295

Query: 327 TGKLKIPVDKTF---HMTQVREAHEAKDKRLIPGKVVLE 362
            GK++  + +TF   +   ++ AH   +     GK+VLE
Sbjct: 296 AGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 95.4 bits (238), Expect = 4e-22
 Identities = 66/215 (30%), Positives = 92/215 (42%), Gaps = 36/215 (16%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASV 107
           V VP   P EVLV+ R V IN  D    +G Y   +     P   G +  GEV AVG  V
Sbjct: 23  VPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGV---KPPFDCGFEGVGEVVAVGEGV 79

Query: 108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AALTAWRA 165
               VG  V      T   G +A+Y V+      P P          +P   + LTA  A
Sbjct: 80  TDFKVGDAV-----ATMSFGAFAEYQVVPARHAVPVP----ELKPEVLPLLVSGLTASIA 130

Query: 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-------KSI--DRVLA 216
           L+    M  G+ +LV    G  G  AVQ +  +GCHV  TC S       KS+  DR   
Sbjct: 131 LEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRP-- 188

Query: 217 AGAEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
                 ++Y ++D+   +K ++    D V +++G 
Sbjct: 189 ------INYKTEDLGEVLKKEYPKGVDVVYESVGG 217

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 91.1 bits (227), Expect = 1e-20
 Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 48/267 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+VL    GP  L    ++  P+  P EVLV+ +A  I   D     G G        P
Sbjct: 2   KALVLT---GPGDLRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHP----P 53

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV---------------------------FGALHP 122
           L+LG + SG V  VG+ V  L VG  V                            G+   
Sbjct: 54  LVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRD 113

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG 182
               G +A+Y  +    L   P  V + +A+ I  AA  A  A++  A ++ G  ++V+G
Sbjct: 114 ----GAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAA-VALHAVR-LAGITLGDTVVVIG 167

Query: 183 GGGAVGFAAVQFSVASGCH-VSATC-GSKSIDRVLAAGAEQAVDYSSKDIEL---AIKGK 237
            G  +G  A+Q+    G   V A     + +      GA+  ++   +D+E      +G+
Sbjct: 168 AG-TIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGR 226

Query: 238 -FDAVLDTIGAPETERLGLNFLKRGGH 263
             D V++  G+P T    L   + GG 
Sbjct: 227 GADLVIEAAGSPATIEQALALARPGGK 253

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 90.6 bits (225), Expect = 1e-20
 Identities = 91/334 (27%), Positives = 148/334 (44%), Gaps = 29/334 (8%)

Query: 38  GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDI 96
           GGPEVL+        D   NEV V  +A+ IN +DT +RSG Y      P LP  LG + 
Sbjct: 11  GGPEVLQA-VEFTPADPAENEVQVENKAIGINYIDTYIRSGLYP----PPSLPSGLGTEA 65

Query: 97  SGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156
           +G V+ VG+ V+ + VG  V  A       G Y+    +  D+    P +++   A+A  
Sbjct: 66  AGVVSKVGSGVKHIKVGDRVVYAQSAL---GAYSSVHNVPADKAAILPDAISFEQAAASF 122

Query: 157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVL 215
              LT +  L+    +   ++ L     G VG  A Q++ A G  +  T GS +   R  
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK 182

Query: 216 AAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270
            AGA Q ++Y  ++I     E+    K   V D++G  +T    L+ L+R G  ++    
Sbjct: 183 KAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNA 241

Query: 271 TAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-AEGLEEIRRLSETGK 329
           +  +    G+ LG       +L ++   + +      YI  R +  E   E+  L  +G 
Sbjct: 242 SGPVT---GVNLG-------ILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGV 291

Query: 330 LKIPV--DKTFHMTQVREAHEAKDKRLIPGKVVL 361
           +K+ V   + F +   + AHE  + R   G  +L
Sbjct: 292 IKVDVAEQQKFPLKDAQRAHEILESRATQGSSLL 325

Length = 327

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 90.8 bits (226), Expect = 2e-20
 Identities = 85/356 (23%), Positives = 137/356 (38%), Gaps = 66/356 (18%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY----GRSIFE-----PLLPLILGRDISG 98
            ++ P     EVLV+  A  +   D  +  G     G            LPL+LG +I G
Sbjct: 17  EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVG 76

Query: 99  EVAAVGASVRSLTVGQEVFGALHP-------------------------TAVRGTYADYA 133
           EV AVG     + VG +V   ++P                             G YA+Y 
Sbjct: 77  EVVAVGPDAADVKVGDKV--LVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYV 134

Query: 134 VLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQ 193
           ++        P  +  A A+ +  + LTA+ A+K    +   + ++++G GG +G  A+ 
Sbjct: 135 IVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGG-LGLMALA 193

Query: 194 FSVASGCHVSATCGSKS---IDRVLAAGAEQAVDYSS----KDIELAIKGKFDAVLDTIG 246
              A G   +          ++   AAGA+  V+ S     K I  A  G  DAV+D + 
Sbjct: 194 LLKALG-PANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVN 252

Query: 247 APETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDY 306
              T  L  + L +GG  +        L   +G    LP+    L    +Q  Y   +  
Sbjct: 253 NSATASLAFDILAKGGKLV--------LVGLFGGEATLPLPLLPLRALTIQGSYVGSL-- 302

Query: 307 SYIYMRADAEGLEEIRRLSETGKLK-IPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
                    E L E+  L++ GKLK IP+     ++ V +A +      + G+ VL
Sbjct: 303 ---------EELRELVALAKAGKLKPIPL-TERPLSDVNDALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 89.7 bits (223), Expect = 3e-20
 Identities = 98/346 (28%), Positives = 142/346 (41%), Gaps = 38/346 (10%)

Query: 30  RAVVLPRFGGPE-VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL 87
           RA V  +FG P  VLE+   V  P     EVLVRT    I+  D     G YG   ++P 
Sbjct: 2   RAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYG---YKPE 57

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP I G +  G V AVG  V+ L VGQ V  A     V GT+A+Y V   D L P P  +
Sbjct: 58  LPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVA----PVHGTWAEYFVAPADGLVPLPDGI 113

Query: 148 ---THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV-S 203
                A   A+P +AL     L     +  GQ L+    GGAVG      + A G +V +
Sbjct: 114 SDEVAAQLIAMPLSALMLLDFLG----VKPGQWLIQNAAGGAVGKLVAMLAAARGINVIN 169

Query: 204 ATCGSKSIDRVLAAGAEQAV-----DYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFL 258
                  +  + A G    V      +  K  E A        LD++G      L L+ L
Sbjct: 170 LVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGEL-LSLL 228

Query: 259 KRGGHYMTLHGETAALADHYGLALGLPI---ATTVLLKKRMQTWYSYGIDYSYIYMRADA 315
             GG  ++           +G   G P+   +  ++ K+     +  G     + +    
Sbjct: 229 GEGGTLVS-----------FGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRK 277

Query: 316 EGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
             + E+  L+  G+L +PV+  F +    +A  A  +    GKV+L
Sbjct: 278 RMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLL 323

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 90/368 (24%), Positives = 138/368 (37%), Gaps = 60/368 (16%)

Query: 29  CRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLD-TRMRSGYG-RSIFE 85
            +A+V    G P EVL++      P   PNEVLV+  A  INP D  +++  Y  +    
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
           P  P + G +  GEV  VG+ V+SL  G  V          GT+  +AV+  D+L   P 
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPG---LGTWRTHAVVPADDLIKVPN 117

Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT 205
            V    A+ +     TA+R L+   ++  G  ++  G   AVG A +Q +   G      
Sbjct: 118 DVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINV 177

Query: 206 C-----GSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLN---- 256
                   +  +R+ A GA+  +       EL      + +    G     +L LN    
Sbjct: 178 VRDRPDLEELKERLKALGADHVLTEE----ELRSLLATELLKSAPGGR--PKLALNCVGG 231

Query: 257 --------FLKRGGHYMTLHGETAALADHYGLALG---LPIATTVLLKK-------RMQT 298
                    L  GG  +T           YG  +    + + T++L+ K        +  
Sbjct: 232 KSATELARLLSPGGTMVT-----------YG-GMSGQPVTVPTSLLIFKDITLRGFWLTR 279

Query: 299 WYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMT---QVREAHEAKDKRLI 355
           W           M      LEE+  L   GKLK P  +        + ++A     K   
Sbjct: 280 WLKRANPEEKEDM------LEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGG 333

Query: 356 PGKVVLEF 363
            GK VL  
Sbjct: 334 GGKQVLVM 341

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 89.7 bits (223), Expect = 4e-20
 Identities = 87/359 (24%), Positives = 148/359 (41%), Gaps = 50/359 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV+LP F     +E    V  P    +EV+++     +   D     G+   +     P
Sbjct: 2   KAVILPGFKQGYRIE---EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM---KYP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHP-----------------------TAVR 126
           +ILG ++ G V  VG +V+    G  V   L+                          + 
Sbjct: 56  VILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELD 115

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA 186
           G +A+YA +    L   P +V+   A  +P      +R L+  A + +G+ +LV G GG 
Sbjct: 116 GFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR-RAGVKKGETVLVTGAGGG 174

Query: 187 VGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIG 246
           VG  A+Q + A G  V A   S+S  ++++  A+  +  S    E+   G  D V++T+G
Sbjct: 175 VGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYVIVGSKFSEEVKKIGGADIVIETVG 234

Query: 247 APETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDY 306
            P  E   L  L  GG  +   G     +  Y L LG  I   + +   +          
Sbjct: 235 TPTLEE-SLRSLNMGGK-IIQIGNVDP-SPTYSLRLGYIILKDIEIIGHISA-------- 283

Query: 307 SYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEA-KDKRLIPGKVVLEFD 364
                + D   +EE  +L   GK+K  +     ++++ +A E  KDK  I GK++++  
Sbjct: 284 ----TKRD---VEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRI-GKILVKPS 334

Length = 334

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 84.9 bits (211), Expect = 1e-18
 Identities = 64/266 (24%), Positives = 105/266 (39%), Gaps = 43/266 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V     GP  LEV   V VP+  P+EVL++  A  I   D  +  G   +      P
Sbjct: 2   KALVYE---GPGELEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAP----P 53

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV------------------------FGALHPTAV 125
           L+ G + +G V AVG+ V    VG  V                          A+  T  
Sbjct: 54  LVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-R 112

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
            G +A+Y V+   ++   P +++  +A+     +           +   G  +LV  G G
Sbjct: 113 NGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKP--GDSVLVF-GAG 169

Query: 186 AVGFAAVQFSVASGCH---VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK---FD 239
            +G    Q    +G     V+     K ++     GA + VD S +D E   +     FD
Sbjct: 170 PIGLLLAQLLKLNGASRVTVAEPNEEK-LELAKKLGATETVDPSREDPEAQKEDNPYGFD 228

Query: 240 AVLDTIGAPETERLGLNFLKRGGHYM 265
            V++  G P+T    + + +RGG  +
Sbjct: 229 VVIEATGVPKTLEQAIEYARRGGTVL 254

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 84.3 bits (209), Expect = 2e-18
 Identities = 89/325 (27%), Positives = 130/325 (40%), Gaps = 50/325 (15%)

Query: 50  EVPDLKP--NEVLVRTRAVSINPLDTR---MRSGYGRSIFEPLLPLILGRDISGEVAAVG 104
           EVPD +P  +E LVR  A+S+N  + +    R   G          + G D +G V    
Sbjct: 18  EVPDPQPAPHEALVRVAAISLNRGELKFAAERPD-GA---------VPGWDAAGVVERAA 67

Query: 105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
           A      VG  V G        G +A+   +    L   P  V+ A A+ +P A +TA R
Sbjct: 68  ADGSGPAVGARVVGLGAM----GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALR 123

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS--KSIDRVLAAGAEQA 222
           AL+    +  G+R+LV G  G VG  AVQ +  +G HV A  GS  ++        AE  
Sbjct: 124 ALRRGGPLL-GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVV 182

Query: 223 VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL-----HGETAALADH 277
           V  S            D V+D++G P+  R  L  L  GG  +++            A  
Sbjct: 183 VGGS-----ELSGAPVDLVVDSVGGPQLARA-LELLAPGGTVVSVGSSSGEPAVFNPAAF 236

Query: 278 YGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKT 337
            G   G          +R+ T++ Y  +         A  L  +  L   G+L   +   
Sbjct: 237 VGGGGG----------RRLYTFFLYDGEPL-------AADLARLLGLVAAGRLDPRIGWR 279

Query: 338 FHMTQVREAHEAKDKRLIPGKVVLE 362
              T++ EA EA   R   GK VL+
Sbjct: 280 GSWTEIDEAAEALLARRFRGKAVLD 304

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 84.8 bits (210), Expect = 4e-18
 Identities = 94/385 (24%), Positives = 146/385 (37%), Gaps = 76/385 (19%)

Query: 36  RFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSIN----------PLDT-RMRSGYGRSIF 84
           R+G P       +V VP+L P EVLV   A  +N          P+ T   R   GR   
Sbjct: 22  RYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRD-- 79

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------ 126
           EP    I G D SG V AVG  V++  VG EV   +H +                     
Sbjct: 80  EPYH--IGGSDASGIVWAVGEGVKNWKVGDEV--VVHCSVWDGNDPERAGGDPMFDPSQR 135

Query: 127 --------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQ 176
                   G++A +A++   +L PKP  ++  +A+A      TA+R L       +  G 
Sbjct: 136 IWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGD 195

Query: 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK 235
            +L+ G  G +G  A+Q + A+G +  A   S+   +   A GAE  ++    D      
Sbjct: 196 NVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHW---- 251

Query: 236 GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAA--LADHYGLALGLPIATTVLLK 293
           G    V        T+     F K    +  L G      + +H G A      T+V + 
Sbjct: 252 GVLPDVNSEAYTAWTKEA-RRFGKA--IWDILGGREDPDIVFEHPGRA---TFPTSVFVC 305

Query: 294 KR--------MQTWYSYGIDYSYIYMR---------ADAEGLEEIRRLSETGKLKIPVDK 336
            R          T Y++  D  Y++MR         A+     E  RL   G++   + K
Sbjct: 306 DRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSK 365

Query: 337 TFHMTQVREAHEA-KDKRLIPGKVV 360
            F + +  +AH+     +   G + 
Sbjct: 366 VFSLDETPDAHQLMHRNQHHVGNMA 390

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 83.8 bits (208), Expect = 5e-18
 Identities = 74/268 (27%), Positives = 105/268 (39%), Gaps = 46/268 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RA V   FG P  LE+R  V  P+  P+ V+V   A  +   D     G+   +    LP
Sbjct: 2   RAAVYEEFGEP--LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV---TLP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVG---------------------------QEVFGALHP 122
            + G + +G V  VG  V    VG                           Q   G  HP
Sbjct: 56  HVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHP 115

Query: 123 TAVRGTYADY-AVLSEDE-LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
               G++A+Y AV   D  L   P  V    A+ +     TA+RAL   AR+  G+ + V
Sbjct: 116 ----GSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAV 171

Query: 181 LGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKD-----IELAI 234
            G GG VG +AV  + A G  V A       ++     GA   V+ S  +     +    
Sbjct: 172 HGCGG-VGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLT 230

Query: 235 KGKFDAVLDTIGAPETERLGLNFLKRGG 262
            G     +D +G PET R  +  L++ G
Sbjct: 231 GGGAHVSVDALGIPETCRNSVASLRKRG 258

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 82.2 bits (204), Expect = 2e-17
 Identities = 70/289 (24%), Positives = 101/289 (34%), Gaps = 70/289 (24%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RA VL   G P  +E    VE+ D  P EVLVR  A  +   D  + +G         LP
Sbjct: 2   RAAVLHEVGKPLEIE---EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGD----LPAPLP 54

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV-----------------------------FGAL 120
            +LG + +G V  VG  V  +  G  V                              G L
Sbjct: 55  AVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL 114

Query: 121 HPTAVR--------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
                R              GT+A+Y V+ E  +      +    A+ +     T   A+
Sbjct: 115 PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAV 174

Query: 167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRV-------LAAG 218
              AR+  G  + V+G GG VG  A+Q +  +G   + A      +D V          G
Sbjct: 175 VNTARVRPGDTVAVIGCGG-VGLNAIQGARIAGASRIIA------VDPVPEKLELARRFG 227

Query: 219 AEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           A   V+ S  D      +L      D   + +G   T R  L   ++GG
Sbjct: 228 ATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGG 276

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 76/310 (24%), Positives = 120/310 (38%), Gaps = 71/310 (22%)

Query: 36  RFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM-RSGYGRSIFEPLLPLILGR 94
              GP  + +   V VP+  P EVLV+ RA  I   D +  R G+     +   P ILG 
Sbjct: 5   VLHGPNDVRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGH----TDLKPPRILGH 59

Query: 95  DISGEVAAVGASVRSLTVGQEVFGALH------PTAVRGTY-----------------AD 131
           +I+GE+  VG  V    VG  VF A H         +RG                   A+
Sbjct: 60  EIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAE 119

Query: 132 YAV-----LSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRLLVLGGG 184
           Y       +    +   P +V+  +A+ + P A  + A R     A +  G  +LV+ G 
Sbjct: 120 YVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQR----KAGIKPGDTVLVI-GA 174

Query: 185 GAVGFAAVQFSVASGCHVSATC--GSKSIDRVLAAGAEQAVDYSSKDIELAIK----GK- 237
           G +G      + ASG             ++     GA+  +D + +D+   ++    G+ 
Sbjct: 175 GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRG 234

Query: 238 FDAVLDTIGAPETERLGLNFLKRGG---------------------HY--MTLHGETAAL 274
            D V+   G+PE +   L  +++GG                     HY  +T+ G  AA 
Sbjct: 235 ADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS 294

Query: 275 ADHYGLALGL 284
            + Y  AL L
Sbjct: 295 PEDYKEALEL 304

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 79.1 bits (196), Expect = 2e-16
 Identities = 72/278 (25%), Positives = 107/278 (38%), Gaps = 40/278 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V+    G   L +R  + + DL   +VL+R    S+N  D    +G G        P
Sbjct: 2   KALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVT--RNYP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV------FGALHPTAVRGTYADYAVLSEDELTPK 143
              G D +G V +          G EV       G        G +A+Y  +  D + P 
Sbjct: 59  HTPGIDAAGTVVSSD--DPRFREGDEVLVTGYDLGMNTD----GGFAEYVRVPADWVVPL 112

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSE-GQR-----LLVLGGGGAVGFAAVQFSVA 197
           P  ++  +A  +  A  TA  AL    R+ + GQ      +LV G  G VG  AV     
Sbjct: 113 PEGLSLREAMILGTAGFTA--AL-SVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAK 169

Query: 198 SGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELA---IKGKFDAVLDTIGAPETERL 253
            G  V A  G +   D + + GA + +D      E     +K ++   +DT+G       
Sbjct: 170 LGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLA-- 227

Query: 254 GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
             N LK         G  A+     G A G  + TTVL
Sbjct: 228 --NLLK----QTKYGGVVAS----CGNAAGPELTTTVL 255

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 77.2 bits (191), Expect = 7e-16
 Identities = 66/282 (23%), Positives = 103/282 (36%), Gaps = 76/282 (26%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSI-----------NPLDTRMRSG 78
           +A+V      P  LEV  ++  P     EVLVR + V I           NP  +     
Sbjct: 2   KALVC---EKPGRLEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFAS----- 52

Query: 79  YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQ------------------------ 114
                     P ILG ++SGEV  VG  V  L VG                         
Sbjct: 53  ---------YPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCC 103

Query: 115 ---EVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAI-PFA--ALTAWRALKC 168
              +V G +H     G +A+Y V+  D L   P  ++   A+ + P A  A    R    
Sbjct: 104 ENLQVLG-VH---RDGGFAEYIVVPADAL-LVPEGLSLDQAALVEPLAIGAHAVRR---- 154

Query: 169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSS 227
            A ++ G  +LV+ G G +G   +Q + A G  V         ++     GA+  ++   
Sbjct: 155 -AGVTAGDTVLVV-GAGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGD 212

Query: 228 KDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHY 264
           +D+   ++        D V+D  G P +    +  +  GG  
Sbjct: 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRV 254

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 77.1 bits (190), Expect = 1e-15
 Identities = 84/371 (22%), Positives = 135/371 (36%), Gaps = 77/371 (20%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL--------------ILGR 94
           V VP+L P EVLV   A  +N       +    ++ EP+                 I+G 
Sbjct: 30  VPVPELGPGEVLVAVMAAGVN------YNNVWAALGEPVSTFAFLRKYGKLDLPFHIIGS 83

Query: 95  DISGEVAAVGASVRSLTVGQEV-FGALHPTAVR-----------------------GTYA 130
           D SG V  VG  V    VG EV    L                             G++A
Sbjct: 84  DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNFGSFA 143

Query: 131 DYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQRLLVLGGGGAVG 188
           ++A++ + +L PKP  +T  +A+       TA+R L     A +  G  +L+ G  G +G
Sbjct: 144 EFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPAAVKPGDNVLIWGAAGGLG 203

Query: 189 FAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA 247
             A Q + A G +  A   S        + GAE  +D +               L     
Sbjct: 204 SYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDFG--------HWGRLPDHNT 255

Query: 248 PETERLGLNFLKRGGH-YMTLHGETAALA-DHYGLALGLPIATTVLLKKRM--------Q 297
              +    +F + G        GE   +  +H G A      T+V + +R          
Sbjct: 256 QAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA---TFPTSVYVCRRGGMVVICGGT 312

Query: 298 TWYSYGIDYSYIYMR---------ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHE 348
           T Y++  D  Y++MR         A+     E  RL   G++   + KT+ + ++ +AH+
Sbjct: 313 TGYNHDYDNRYLWMRQKRIQGSHFANLREAYEANRLVAKGRIDPTLSKTYPLEEIGQAHQ 372

Query: 349 AKDKRLIPGKV 359
              +    G V
Sbjct: 373 DVHRNHHQGNV 383

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 76.0 bits (188), Expect = 2e-15
 Identities = 78/307 (25%), Positives = 117/307 (38%), Gaps = 48/307 (15%)

Query: 49  VEVPDLKPNEVLVRTRAVSINP-LDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
           V +P+LK  EVLVRT  +S++P +   M      S      P+ LG  + G    VG  V
Sbjct: 25  VPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYS-----PPVQLGEPMRG--GGVGEVV 77

Query: 108 RS----LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA----- 158
            S      VG  V G L        + +YAV+       K   +  +    +        
Sbjct: 78  ESRSPDFKVGDLVSGFLG-------WQEYAVVDGASGLRK---LDPSLGLPLSAYLGVLG 127

Query: 159 --ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL 215
              LTA+  L    +   G+ ++V    GAVG    Q +   G  V    GS      ++
Sbjct: 128 MTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV 187

Query: 216 -AAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270
              G + A++Y + D+  A+K       D   D +G    +   L  L +GG  + L G 
Sbjct: 188 EELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILD-AALTLLNKGGR-IALCG- 244

Query: 271 TAALADHYGLALGLPIATTVLLKKR--MQTWYSYGIDYSYIYMRADAEGLEEIRRLSETG 328
             A++ +       P     ++ KR  MQ     G   S    R   E L E+ +    G
Sbjct: 245 --AISQYNATEPPGPKNLGNIITKRLTMQ-----GFIVSDYADRF-PEALAELAKWLAEG 296

Query: 329 KLKIPVD 335
           KLK   D
Sbjct: 297 KLKYRED 303

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 75.9 bits (187), Expect = 3e-15
 Identities = 107/393 (27%), Positives = 164/393 (41%), Gaps = 87/393 (22%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL     P  +E    + VP  K  E+L+R  A  +   D  +  G     F P  P
Sbjct: 2   KAAVLKGPNPPLTIE---EIPVPRPKEGEILIRVAACGVCHSDLHVLKG--ELPFPP--P 54

Query: 90  LILGRDISGEVAAVGASVRS---LTVGQEVFGA--------------------------- 119
            +LG +ISGEV  VG +V +   L+VG  V G+                           
Sbjct: 55  FVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNR 114

Query: 120 --------------LHPTAVR----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
                         L    V     G  A+YAV+    L P P S+ + +++ +  A  T
Sbjct: 115 LKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFT 174

Query: 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA---- 217
           A+ ALK AA +  G+ + V+G GG VG +A+Q + A G   S        D  LA     
Sbjct: 175 AYGALKHAADVRPGETVAVIGVGG-VGSSAIQLAKAFG--ASPIIAVDVRDEKLAKAKEL 231

Query: 218 GAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGH-YMTLHGET 271
           GA   V+ + +D   AI+        D V++ +G PET +L L+ ++ GG   +      
Sbjct: 232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG 291

Query: 272 AALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK 331
            A A          I  T L+++ ++   SYG        R D   L E+  L+ +GKL 
Sbjct: 292 GATA---------EIPITRLVRRGIKIIGSYGAR-----PRQD---LPELVGLAASGKLD 334

Query: 332 IP--VDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
               V   + + ++ EA+E   K LI G+ ++E
Sbjct: 335 PEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 75.3 bits (186), Expect = 3e-15
 Identities = 95/375 (25%), Positives = 133/375 (35%), Gaps = 90/375 (24%)

Query: 30  RAVVLPRFGGPEVLEVRP----NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           +A+VL +   P  +E  P     V VP+  P EVL++  A  +   D  +  G    +  
Sbjct: 2   KAMVLEK---PGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEG---DLPP 55

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGA--LHPT-------------------- 123
           P LPLI G +I G V AVG  V   +VG  V G   L  T                    
Sbjct: 56  PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRV-GVPWLGSTCGECRYCRSGRENLCDNARF 114

Query: 124 ---AVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AALTAWRALKCAARMSEGQRL 178
               V G YA+Y V  E    P P    + D  A P   A +  +RALK  A +  GQRL
Sbjct: 115 TGYTVDGGYAEYMVADERFAYPIPE--DYDDEEAAPLLCAGIIGYRALK-LAGLKPGQRL 171

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK 237
             L G GA    A+Q +   G  V A T   +  +     GA+ A D             
Sbjct: 172 -GLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL-----PPEP 225

Query: 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ 297
            DA +            L  +K+GG           LA  +   +               
Sbjct: 226 LDAAIIFAPVGALVPAALRAVKKGG--------RVVLAGIHMSDIP-------------- 263

Query: 298 TWYSYGIDYSYIYM-----------RADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREA 346
                  DY  ++            R D    EE  +L+    +K P  +T+ + +  EA
Sbjct: 264 -----AFDYELLWGEKTIRSVANLTRQDG---EEFLKLAAEIPIK-PEVETYPLEEANEA 314

Query: 347 HEAKDKRLIPGKVVL 361
            +   +  I G  VL
Sbjct: 315 LQDLKEGRIRGAAVL 329

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 75.3 bits (186), Expect = 4e-15
 Identities = 71/296 (23%), Positives = 97/296 (32%), Gaps = 81/296 (27%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            RA V    G P  LE+   V++   +  EVLVR  A  +   D    SG      E   
Sbjct: 3   TRAAVAREAGKP--LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSG---DDPEGF- 55

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP----------------TAVR------ 126
           P +LG + +G V AVG  V S+  G  V     P                 A+R      
Sbjct: 56  PAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKG 115

Query: 127 ----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T+A+Y V+ E  L           A  +     T   
Sbjct: 116 TMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIG 175

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA------- 217
           A+   A++  G  + V G GG VG AA+Q + A+G             R++A        
Sbjct: 176 AVVNTAKVEPGDTVAVFGLGG-VGLAAIQGAKAAGA-----------GRIIAVDINPEKL 223

Query: 218 ------GAEQAVDYSSKD-----IELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
                 GA   V+    D     I     G  D   + +G  E  R  L    RGG
Sbjct: 224 ELAKKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGG 279

Length = 366

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 70.1 bits (172), Expect = 7e-15
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 18/145 (12%)

Query: 218 GAEQAVDYSSKDIELAIKGK-FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALAD 276
           GA++ +DY+++D E A  G+  D VLDT+G     R  L  LK GG  +++         
Sbjct: 2   GADEVIDYTTEDFEEATAGEGVDVVLDTVGGETLLRALLA-LKPGGRLVSI--------- 51

Query: 277 HYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDK 336
                    + +              G+    +        L E+  L E GKL+  +D+
Sbjct: 52  ----GGPDLLLSVAAKAGGRG---VRGVFLFPVSPGEAGADLAELAELVEAGKLRPVIDR 104

Query: 337 TFHMTQVREAHEAKDKRLIPGKVVL 361
            F + +  EAH   +     GKVVL
Sbjct: 105 VFPLEEAAEAHRYLESGRARGKVVL 129

Length = 129

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 72.7 bits (179), Expect = 3e-14
 Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 17/193 (8%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108
           V+VP+    +VL+RT  +S++P   R R     S   P+    LG  + G   A   +  
Sbjct: 32  VDVPEPGEGQVLLRTLYLSLDP-YMRGRMSDAPSYAPPVE---LGEVMVGGTVAKVVASN 87

Query: 109 S--LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADA--SAIPFAALTAWR 164
                 G  V G          + +YA+   + L     S     A    +    LTA+ 
Sbjct: 88  HPGFQPGDIVVGVS-------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYF 140

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA--GAEQA 222
            L    +   G+ ++V    GAVG    Q +   GC V    G       L    G +  
Sbjct: 141 GLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAG 200

Query: 223 VDYSSKDIELAIK 235
           +DY ++D   A+K
Sbjct: 201 IDYKAEDFAQALK 213

Length = 340

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 70.7 bits (174), Expect = 9e-14
 Identities = 90/347 (25%), Positives = 140/347 (40%), Gaps = 40/347 (11%)

Query: 30  RAVVLPRFGGP-EVLEVR-PNVEVPDLKPNEVLVRTRAVSINPLD-TRMRSGYGRSIFEP 86
           +A++L  +G P EV E+  P  EVP+  P EVL++  A  INP D   ++  YG      
Sbjct: 2   KALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYG---STK 58

Query: 87  LLPLILGRDISGEVAAVGAS-VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
            LP+  G + SG V A G   +    +G+ V          GTYA+YAV    +  P P 
Sbjct: 59  ALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFL---AGSYGTYAEYAVADAQQCLPLPD 115

Query: 146 SVTHADASAIPFA-ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
            V+    ++  F   LTA   L+  AR    + ++      A+G   V+   A G  V  
Sbjct: 116 GVSFEQGAS-SFVNPLTALGMLE-TAREEGAKAVVHTAAASALGRMLVRLCKADGIKVIN 173

Query: 205 TCGSKS-IDRVLAAGAEQAVDYSSKD-----IELAIKGK----FDAVLDTIGAPETERLG 254
               K  +D +   GAE  ++ S  D      EL  K      FDAV    G   T ++ 
Sbjct: 174 IVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAV----GGGLTGQI- 228

Query: 255 LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD 314
           L  +  G    TL+         YG   G        +    +     G   +    +  
Sbjct: 229 LLAMPYGS---TLYV--------YGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLG 277

Query: 315 AEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
            E ++++++L +T +LK      + +    EA     K +  GK +L
Sbjct: 278 PEVVKKLKKLVKT-ELKTTFASRYPLALTLEAIAFYSKNMSTGKKLL 323

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 70.6 bits (174), Expect = 1e-13
 Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 39/253 (15%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRM-RSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
             E   L P++V ++     +   D    R+ +G + +    PL+ G +I G V AVG+ 
Sbjct: 16  TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKY----PLVPGHEIVGIVVAVGSK 71

Query: 107 VRSLTVGQEV-FGALH-----------------PTAV-------------RGTYADYAVL 135
           V    VG  V  G                    P  V             +G YAD+ V+
Sbjct: 72  VTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVV 131

Query: 136 SEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
            E  +   P  +  A A+ +  A +T +  LK    +  G+R+ V+G GG +G  AV+F+
Sbjct: 132 DERFVFKIPEGLDSAAAAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGG-LGHLAVKFA 189

Query: 196 VASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG 254
            A G  V+A   S S  +  L  GA++ +     +      G  D ++DT+ A       
Sbjct: 190 KALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPY 249

Query: 255 LNFLKRGGHYMTL 267
           L+ LK GG  + +
Sbjct: 250 LSLLKPGGTLVLV 262

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 70.6 bits (174), Expect = 1e-13
 Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 42/213 (19%)

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV------FGALHPTAVRGTY------------ 129
            P+ LG + SG V  VG+ V    VG  V               RG Y            
Sbjct: 64  APVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLG 123

Query: 130 ------ADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLG 182
                 A+Y V+    +   P +V   +A+ + P A   AW A++ +     G   LVL 
Sbjct: 124 GGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLA--VAWHAVRRSG-FKPGDTALVL- 179

Query: 183 GGGAVGFAAVQFSVASGCH---VSATCGSKSIDRVLA--AGAEQAVDYSSKDIELAIK-- 235
           G G +G   +    A+G     VS    ++   R LA   GA   +D +  D+   ++  
Sbjct: 180 GAGPIGLLTILALKAAGASKIIVSEPSEAR---RELAEELGATIVLDPTEVDVVAEVRKL 236

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
              G  D   D  G   T    ++ L+  G  +
Sbjct: 237 TGGGGVDVSFDCAGVQATLDTAIDALRPRGTAV 269

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 68.6 bits (168), Expect = 7e-13
 Identities = 82/378 (21%), Positives = 131/378 (34%), Gaps = 73/378 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+  + G   + +      P   P +VL+R  A  I   D  +  G     F P   
Sbjct: 2   KAAVV--YVGGGDVRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRG--GEPFVPPGD 56

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV----------------------------FGALH 121
           +ILG +  GEV  VG  VR   VG  V                              A  
Sbjct: 57  IILGHEFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGL 115

Query: 122 PTAVRGTYADYAVLSEDELTPKPV-SVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
              + G +A+Y  +  D    K    +    A+     A TA+      A +  G  ++V
Sbjct: 116 GGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLA-TAYHGHAERAAVRPGGTVVV 174

Query: 181 LGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRV-LAA---GAEQAVDYSSKDIELAIK- 235
           +G G  +G  A+  +   G  V      +S +R+ LA    GA+  V+ S  D    I  
Sbjct: 175 VGAG-PIGLLAIALAKLLGASV-VIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILE 232

Query: 236 ----GKFDAVLDTIGAPETERLGLNFLKRGGHYM---TLHGETAALADHYGLALGLPIAT 288
                  D V++ +G+P      L  L+ GG  +      GE   L     ++  L +  
Sbjct: 233 LTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRG 292

Query: 289 TVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREA 346
                       S        + RA    L+ +     +GK+     +     +    EA
Sbjct: 293 ------------SLRPSGREDFERA----LDLLA----SGKIDPEKLITHRLPLDDAAEA 332

Query: 347 HEA-KDKRLIPGKVVLEF 363
           +E   D++    KVVL+ 
Sbjct: 333 YELFADRKEEAIKVVLKP 350

Length = 350

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 63.8 bits (156), Expect = 8e-13
 Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 26/110 (23%)

Query: 56  PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQE 115
           P EVLVR +A  I   D  +  G         LPLILG + +G V  VG  V  L VG  
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGE---PPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDR 57

Query: 116 VF-----------------------GALHPTAVRGTYADYAVLSEDELTP 142
           V                        G      + G +A+Y V+    L P
Sbjct: 58  VVVYPLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVP 107

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 65/249 (26%), Positives = 100/249 (40%), Gaps = 37/249 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV +   GGP  L  R   +VP   P EVL++  A  +   D  ++ G    +  P +P
Sbjct: 2   KAVQVTEPGGPLELVER---DVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALH-----------------------PTAVR 126
              G ++ G + AVG  V    VG  V    H                           R
Sbjct: 59  ---GHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTR 115

Query: 127 -GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL-KCAARMSEGQRLLVLGGG 184
            G YA+Y +   + L   P  +  A+A+ +  A +T + AL    A+   G  + V G G
Sbjct: 116 DGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNSGAK--PGDLVAVQGIG 173

Query: 185 GAVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAV 241
           G +G  AVQ++   G    A + GS   D     GA   +D S +D+  A++  G    +
Sbjct: 174 G-LGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLI 232

Query: 242 LDTIGAPET 250
           L T    + 
Sbjct: 233 LATAPNAKA 241

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 66.8 bits (164), Expect = 2e-12
 Identities = 82/303 (27%), Positives = 108/303 (35%), Gaps = 89/303 (29%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
               A V+   GGP VLE   +VE+ D +P+EVLVR  A  I   D  +R G        
Sbjct: 1   MKTTAAVVREPGGPFVLE---DVELDDPRPDEVLVRIVATGICHTDLVVRDG----GLPT 53

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEV-----------------------FGAL--- 120
            LP +LG + +G V AVG++V  L  G  V                       F  L   
Sbjct: 54  PLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFS 113

Query: 121 -------------HPTAVRGTY------ADYAVLSEDELTPKPVSVTHADASAIPFAAL- 160
                          T V G +      A YAV+ E  +    V V   D      A L 
Sbjct: 114 GRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNV----VKVD-KDVPLELLAPLG 168

Query: 161 --------TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI 211
                        LK       G  + V  G GAVG AAV  +  +GC  + A      +
Sbjct: 169 CGIQTGAGAVLNVLKPRP----GSSIAVF-GAGAVGLAAVMAAKIAGCTTIIA------V 217

Query: 212 DRV-----LAA--GAEQAVDYSSKDIELAIKGKF----DAVLDTIGAPETERLGLNFLKR 260
           D V     LA   GA   ++   +D+  AI+       D  LDT G P      ++ L  
Sbjct: 218 DIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAP 277

Query: 261 GGH 263
            G 
Sbjct: 278 RGT 280

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 85/372 (22%), Positives = 135/372 (36%), Gaps = 79/372 (21%)

Query: 35  PRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM-RSGYGRSIFEPLLPLILG 93
             F G   +E+R    VP   P EVL+R +A  +   D      G+    ++ ++P   G
Sbjct: 4   AVFPGDRTVELRE-FPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIP---G 59

Query: 94  RDISGEVAAVGASVRSLTVGQEV----------------------------FGALHPTAV 125
            + +G V AVG  V    VG  V                            +G       
Sbjct: 60  HEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRD--- 116

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
            G +A+Y ++ E  L P P  ++ AD + +     TA+ AL+     S    +LV+ G G
Sbjct: 117 -GGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGV-SGRDTVLVV-GAG 173

Query: 186 AVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDY-------SSKDIELAIKGK- 237
            VG  A+  + A G       G       L        D+         ++I     G  
Sbjct: 174 PVGLGALMLARALGAEDVI--GVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAG 231

Query: 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR-- 295
            D  ++  G     RL L  ++  G  + L GE   L         + ++  ++ K+R  
Sbjct: 232 ADVAIECSGNTAARRLALEAVRPWGR-LVLVGEGGELT--------IEVSNDLIRKQRTL 282

Query: 296 MQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDK----TFHMTQVREAHEAKD 351
           + +WY     +S   M   AE L          + K+ VD+     F + Q  EA+    
Sbjct: 283 IGSWY-----FSVPDMEECAEFLA---------RHKLEVDRLVTHRFGLDQAPEAYALFA 328

Query: 352 KRLIPGKVVLEF 363
           +    GKVV  F
Sbjct: 329 QGES-GKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 65/257 (25%), Positives = 99/257 (38%), Gaps = 52/257 (20%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG--------YGR 81
           RA V     GP V+   P+   P+  P +VLV+  A  I   D    +          G 
Sbjct: 2   RAAVFR--DGPLVVRDVPD---PEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGP 56

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRS-LTVGQEV--------------FGALHPTAVR 126
           S+ +    ++LG +  GEV   G      L VG  V                 L P A  
Sbjct: 57  SLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAP- 115

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLGGGG 185
           G YA+Y +LSE  L   P  ++  DA+   P A      A++  AR++ G+  LV+ G G
Sbjct: 116 GGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA--VGLHAVR-RARLTPGEVALVI-GCG 171

Query: 186 AVGFA--------------AVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231
            +G A              A  FS      ++   G+   D V+   A+      + ++ 
Sbjct: 172 PIGLAVIAALKARGVGPIVASDFS-PERRALALAMGA---DIVVDPAADSPFAAWAAELA 227

Query: 232 LAIKGKFDAVLDTIGAP 248
            A   K   + + +GAP
Sbjct: 228 RAGGPKPAVIFECVGAP 244

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 60.2 bits (147), Expect = 4e-10
 Identities = 67/277 (24%), Positives = 98/277 (35%), Gaps = 57/277 (20%)

Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLD----TRMRSGYGRSIFEP 86
           A VL    GP  L +     +P+  P EVLVR RAV I   D       R G     F  
Sbjct: 1   AAVLH---GPGDLRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIG----DFVV 52

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP------------------------ 122
             P++LG + +G V AVG+ V  L VG  V  A+ P                        
Sbjct: 53  KEPMVLGHESAGTVVAVGSGVTHLKVGDRV--AIEPGVPCRTCEFCKSGRYNLCPDMRFA 110

Query: 123 -TA-VRGTYADYAVLSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRL 178
            T  V GT   Y     D     P +V+  + + + P +  + A R     A +  G  +
Sbjct: 111 ATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACR----RAGVRPGDTV 166

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCG--------SKSI--DRVLAAGAEQAVDYSSK 228
           LV  G G +G      + A G                +K +     +    E   + + K
Sbjct: 167 LVF-GAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEK 225

Query: 229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
             EL      D V++  GA    +  +   + GG  +
Sbjct: 226 IAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVV 262

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 59.1 bits (144), Expect = 9e-10
 Identities = 77/278 (27%), Positives = 112/278 (40%), Gaps = 41/278 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V+ +  G    +V   +++ DL   +VL++    S+N  D    +G G  +     P
Sbjct: 1   KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRS--YP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV------FGALHPTAVRGTYADYAVLSEDELTPK 143
           +I G D +G V  V +       G EV       G  H     G Y+ YA +  D L P 
Sbjct: 58  MIPGIDAAGTV--VSSEDPRFREGDEVIVTGYGLGVSHD----GGYSQYARVPADWLVPL 111

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSE-GQR-----LLVLGGGGAVGFAAVQFSVA 197
           P  ++  +A A+  A  TA  AL     +   G       +LV G  G VG  AV     
Sbjct: 112 PEGLSLREAMALGTAGFTA--AL-SVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSK 168

Query: 198 SGCHVSATCGSKSI-DRVLAAGAEQAV---DYSSKDIELAIKGKFDAVLDTIGAPETERL 253
            G  V A+ G     D +   GA + +   D S     L  K ++   +DT+G      +
Sbjct: 169 LGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLE-KERWAGAVDTVGGHTLANV 227

Query: 254 GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
            L  LK GG          A     GLA G  + TTVL
Sbjct: 228 -LAQLKYGG--------AVAA---CGLAGGPDLPTTVL 253

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 58.8 bits (143), Expect = 1e-09
 Identities = 73/284 (25%), Positives = 104/284 (36%), Gaps = 54/284 (19%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            RA VL   G P  LE+R  V +PDL+P  VLVR R   +   D    +  GR    P L
Sbjct: 1   ARAAVLTGPGKP--LEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVA--GRRPRVP-L 54

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQE-------VFG------------ALHPT------ 123
           P+ILG +  G V A+G  V +   G+         +                PT      
Sbjct: 55  PIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRK 114

Query: 124 -----------AVRGTYADYAVLSED-ELTPKPVSVTHADASAIPFAALTAWRALKCAAR 171
                       + G YA++  L     +   P +V    A+    A  T   AL  A  
Sbjct: 115 KYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGP 174

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAAGAEQAVDYSSKD 229
           +  G  ++V G G  +G  AV  +  +G   V    GS   ++     GA+  +D     
Sbjct: 175 VGAGDTVVVQGAGP-LGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELP 233

Query: 230 IELAIK--------GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
                            D V++  G P     GL  L+RGG Y+
Sbjct: 234 DPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYV 277

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 49/178 (27%), Positives = 68/178 (38%), Gaps = 14/178 (7%)

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
            LPL  G    G V  VG+ V     G  VF         G +A+  V+  + L P P  
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------GPHAERVVVPANLLVPLPDG 71

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT 205
           +    A+    AA TA   ++  A    G+R+ V+ G G VG  A Q + A+G   V   
Sbjct: 72  LPPERAALTALAA-TALNGVRD-AEPRLGERVAVV-GLGLVGLLAAQLAKAAGAREVVGV 128

Query: 206 CGSKSIDRVLAAGAEQAVDYSSKDIELAI-KGKFDAVLDTIGAPETERLGLNFLKRGG 262
                  R   A A    D  + D    I     D V++  G+P      L  L+  G
Sbjct: 129 --DPDAARRELAEALGPADPVAADTADEIGGRGADVVIEASGSPSALETALRLLRDRG 184

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 70/292 (23%), Positives = 102/292 (34%), Gaps = 60/292 (20%)

Query: 30  RAVVLPRFGGPEVL-EVRP----NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           RA VL   G P    + RP     VE+    P EVLV+  A  +   D  + +G      
Sbjct: 2   RAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVING---DRP 58

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVF--------------------------- 117
            PL P+ LG + +G V  VG  V  L VG  V                            
Sbjct: 59  RPL-PMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAA 117

Query: 118 ---GALHPTAVR--------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAAL 160
              G L     R                +A+YAV+S   +      V    A+    A L
Sbjct: 118 NGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVL 177

Query: 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH--VSATCGSKSIDRVLAAG 218
           T   A+   A +  GQ + V+G GG VG +A+  +VA+G    V+       +      G
Sbjct: 178 TGVGAVVNTAGVRPGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDLNEDKLALARELG 236

Query: 219 AEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
           A   V+    +    ++    G  D   +  G+           +RGG  +T
Sbjct: 237 ATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVT 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 63/254 (24%), Positives = 98/254 (38%), Gaps = 44/254 (17%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRS--GYGRSIFEPLLPLILGRDISGEVAAVGAS 106
           V VP+  P EVL++  A SI   D  + +   + +S  +P  P ++G +++GEV  +G  
Sbjct: 16  VPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKP--PQVVGHEVAGEVVGIGPG 73

Query: 107 VRSLTVGQEVFGALHPTAVR-----------------------GTYADYAVLSEDELTPK 143
           V  + VG  V    H    +                       G +A+YAV+    +   
Sbjct: 74  VEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN 133

Query: 144 PVSVTHADASAI-PF--AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           P S+    A+   P   A  T        A    G+ +LV  G G +G  A+  + ASG 
Sbjct: 134 PKSIPPEYATIQEPLGNAVHTV------LAGPISGKSVLVT-GAGPIGLMAIAVAKASGA 186

Query: 201 HVSATCGSKSIDRVLA--AGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERL 253
           +             LA   GA   V+   +D+     +L      D  L+  GAP+    
Sbjct: 187 YPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQ 246

Query: 254 GLNFLKRGGHYMTL 267
           GL  +  GG    L
Sbjct: 247 GLQAVTPGGRVSLL 260

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 66/289 (22%), Positives = 103/289 (35%), Gaps = 66/289 (22%)

Query: 29  CRAVVLPRFGGP---EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           C+A VL   G P   E +EV P    P  K  EV ++  A  +   D  +  G       
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAP----P--KAGEVRIKVVATGVCHTDLHVIDG----KLP 50

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEV---FGA------------------LHPTA 124
             LP+ILG + +G V ++G  V +L  G +V   FG                      T 
Sbjct: 51  TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTN 110

Query: 125 VRG-----------------------TYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
            RG                       T+A+Y V+SE  L              I     T
Sbjct: 111 GRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFST 170

Query: 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH--VSATCGSKSIDRVLAAGA 219
            + A    A+++ G    V G GG VG + +    A+G    ++        ++    GA
Sbjct: 171 GYGAAVNTAKVTPGSTCAVFGLGG-VGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGA 229

Query: 220 EQAVD--YSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGG 262
            + ++     K I   +     G  D   + IG+ +T +  L+  + GG
Sbjct: 230 TECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG 278

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 69/261 (26%), Positives = 104/261 (39%), Gaps = 65/261 (24%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLD-----------TRMRSGYGRSIFEPLLPLILGRDIS 97
              P+  P EV VR  A  I   D            R+R            P++LG ++S
Sbjct: 14  RPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLRE-----------PMVLGHEVS 62

Query: 98  GEVAAVGASVRSLTVGQEVFGALHPTA------------------------------VRG 127
           G V AVG  V  L  GQ V  A++P+                               V+G
Sbjct: 63  GVVEAVGPGVTGLAPGQRV--AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQG 120

Query: 128 TYADYAVLSEDELTPKPVSVTHADAS-AIPFAALTAWRALKCAARMSEGQRLLVLGGG-- 184
            + +Y V+   +  P P  ++   A+ A P A   A  A+  A  +  G+R+LV G G  
Sbjct: 121 GFREYLVVDASQCVPLPDGLSLRRAALAEPLA--VALHAVNRAGDL-AGKRVLVTGAGPI 177

Query: 185 GAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIEL--AIKGKFDAV 241
           GA+  AA + + A+   + AT      +    A GA++ V+ +   +    A KG FD V
Sbjct: 178 GALVVAAARRAGAA--EIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVV 235

Query: 242 LDTIGAPETERLGLNFLKRGG 262
            +  GAP      L  ++ GG
Sbjct: 236 FEASGAPAALASALRVVRPGG 256

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 54.1 bits (131), Expect = 4e-08
 Identities = 65/253 (25%), Positives = 103/253 (40%), Gaps = 52/253 (20%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRS--GYGRSIFEPLLPLILGRDISGEVAAVGAS 106
           V VP+  PN+VL++ +  +I   D  + +   + +       P+++G +  GEV  VG+ 
Sbjct: 18  VPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV--PMVVGHEFVGEVVEVGSE 75

Query: 107 VRSLTVGQEVFGALHPTAVR-----------------------GTYADYAVLSEDELTPK 143
           V    VG  V G  H                            G +A+Y V+    +   
Sbjct: 76  VTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKI 135

Query: 144 PVSVTHADASAI--PF--AALTAWRALKCAARMSEGQRLLVLGGG--GAVGFAAVQFSVA 197
           P  +   D +AI  PF  A  TA       +    G+ +L+ G G  G +  A  +   A
Sbjct: 136 PDDIP-DDLAAIFDPFGNAVHTAL------SFDLVGEDVLITGAGPIGIMAAAVAKHVGA 188

Query: 198 SGCHVSATCGSKSIDRV-LAA--GAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPE 249
              HV  T    +  R+ LA   GA +AV+ + +D+     EL +   FD  L+  GAP 
Sbjct: 189 R--HVVIT--DVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPS 244

Query: 250 TERLGLNFLKRGG 262
             R  L+ +  GG
Sbjct: 245 AFRQMLDNMNHGG 257

Length = 341

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMR--SGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
           V VP   P EVL++  A SI   D  +     + +S  +P  PLI G + +GEV  VG  
Sbjct: 18  VPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP--PLIFGHEFAGEVVEVGEG 75

Query: 107 VRSLTVGQEV 116
           V  + VG  V
Sbjct: 76  VTRVKVGDYV 85

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 22/228 (9%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
           N+ + DL   +VL+R    S+N  D       G+ +     P I G D++G V       
Sbjct: 19  NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKR--YPFIPGIDLAGTVVESNDP- 75

Query: 108 RSLTVGQEV------FGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
                G EV       G  H     G Y++YA +  + + P P  +T  +A  +  A  T
Sbjct: 76  -RFKPGDEVIVTSYDLGVSH----HGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFT 130

Query: 162 AW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAA 217
           A      L+      E   +LV G  G VG  AV      G  V A+ G     D +   
Sbjct: 131 AALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKL 190

Query: 218 GAEQAV---DYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           GA++ +   +   + I+   K ++   +D +G      L L+ L+ GG
Sbjct: 191 GAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYL-LSTLQYGG 237

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 186 AVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAAGAEQAVDYSSKDI-----ELAIKGKF 238
            VG AAVQ + A G   V A   S+  ++     GA+  ++Y  +D      EL      
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 239 DAVLDTIGAPETERLGLNFLKRGG 262
           D V+D +GAP T    L  L+ GG
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGG 84

Length = 131

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 67/278 (24%), Positives = 103/278 (37%), Gaps = 62/278 (22%)

Query: 30  RAVVL--PRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           +A+V   P  G  E+ EV      P+  P EVL++  A  I   D  +  G         
Sbjct: 2   KALVKTGPGPGNVELREV----PEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP---VE 54

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV----------------------------FGA 119
            P++LG + SG +  VG  V    VG  V                             G 
Sbjct: 55  TPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG- 113

Query: 120 LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT-----AWRALKCAARMSE 174
              T   G +A+Y ++ E+ L   P      +  ++  AALT     A  A+   + +  
Sbjct: 114 ---TQADGGFAEYVLVPEESLHELP------ENLSLEAAALTEPLAVAVHAVAERSGIRP 164

Query: 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA---GAEQAVDYSSKDI- 230
           G  ++V  G G +G  A Q +   G  V      K   R+  A   GA+ AV+   +D+ 
Sbjct: 165 GDTVVVF-GPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGAD-AVNGGEEDLA 222

Query: 231 ----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
               E+      D V++  GA       L  L++GG  
Sbjct: 223 ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRI 260

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 50.2 bits (121), Expect = 6e-07
 Identities = 63/233 (27%), Positives = 94/233 (40%), Gaps = 29/233 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+VL +  G    E+R  ++  DL   +V V     ++N  D    +G G  +     P
Sbjct: 2   KALVLEKDDGGTSAELRE-LDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRT--FP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF------GALHPTAVRGTYADYAVLSEDELTPK 143
           L+ G D++G V    +S      G  V       G  H     G YA  A +  D L P 
Sbjct: 59  LVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERHW----GGYAQRARVKADWLVPL 112

Query: 144 PVSVTHADASAIPFAALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           P  ++   A AI  A  TA     AL+          +LV G  G VG  AV      G 
Sbjct: 113 PEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY 172

Query: 201 HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGK------FDAVLDTIG 246
            V A+ G     D + + GA + +D +    EL+  G+      +   +DT+G
Sbjct: 173 EVVASTGRPEEADYLRSLGASEIIDRA----ELSEPGRPLQKERWAGAVDTVG 221

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 58/249 (23%), Positives = 85/249 (34%), Gaps = 37/249 (14%)

Query: 36  RFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRD 95
              G   L V  ++  P+  P E LVR     I   D  +  GY         P + G +
Sbjct: 5   VLDGGLDLRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP------FPGVPGHE 57

Query: 96  ISGEVAAVGAS--VRSLTVGQEVFGALH-PTAVRGTY------------------ADYAV 134
             G V     +  V    VG+            RG Y                  A+Y  
Sbjct: 58  FVGIVEEGPEAELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLT 117

Query: 135 LSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQ 193
           L  + L   P  V    A    P AA  A   L+    ++ G ++ VL G G +G    Q
Sbjct: 118 LPLENLHVVPDLVPDEQAVFAEPLAA--ALEILE-QVPITPGDKVAVL-GDGKLGLLIAQ 173

Query: 194 FSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL 253
               +G  V      +  ++ LA      V+    D   +  G FD V++  G+P    L
Sbjct: 174 VLALTGPDV--VLVGRHSEK-LALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLEL 230

Query: 254 GLNFLK-RG 261
            L  ++ RG
Sbjct: 231 ALRLVRPRG 239

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 64/266 (24%), Positives = 97/266 (36%), Gaps = 51/266 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           R V+    G P  LE    + VPD  P EV+V  +A  +   D   R G     F    P
Sbjct: 3   RGVIARSKGAPVELE---TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEF----P 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV-------------------------FGA----- 119
            +LG + +G V AVG  V  +  G  V                           A     
Sbjct: 56  FLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMT 115

Query: 120 ------LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS 173
                 L P    G +A+  ++   + T    +   A A  +    +    A      + 
Sbjct: 116 LTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVK 175

Query: 174 EGQRLLVLGGGGAVGFAAVQFSVASGCH--VSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231
            G  + V+G GG VG AA+  +  +G    ++     + ++     GA   V+ S  D  
Sbjct: 176 RGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPV 234

Query: 232 LAIK---GKF--DAVLDTIGAPETER 252
            AI+   G F  D V+D +G PET +
Sbjct: 235 EAIRALTGGFGADVVIDAVGRPETYK 260

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 63/268 (23%), Positives = 91/268 (33%), Gaps = 58/268 (21%)

Query: 39  GPEVLEVRPNVEVPDLKPNE---VLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRD 95
           GP  + +    EVPD K       +VR  A SI   D  +  G    +      +ILG +
Sbjct: 8   GPGKIGLE---EVPDPKIQGPHDAIVRVTATSICGSDLHIYRG---GVPGAKHGMILGHE 61

Query: 96  ISGEVAAVGASVRSLTVGQEV------------------------------FGA----LH 121
             GEV  VG+ V+ L  G  V                               G       
Sbjct: 62  FVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQ 121

Query: 122 PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL 181
              VR  YAD        L   P  +   DA  +     T +   +  A +  G  + V+
Sbjct: 122 AEYVRVPYADMN------LAKIPDGLPDEDALMLSDILPTGFHGAEL-AGIKPGSTVAVI 174

Query: 182 GGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIK---- 235
            G G VG  AV  +   G        S    +D    AGA   ++  + DI   I     
Sbjct: 175 -GAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTG 233

Query: 236 GK-FDAVLDTIGAPETERLGLNFLKRGG 262
           G+  D V++ +G  ET    +  ++ GG
Sbjct: 234 GRGVDCVIEAVGFEETFEQAVKVVRPGG 261

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 77/327 (23%), Positives = 112/327 (34%), Gaps = 58/327 (17%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-GRSIF-EPLLPLILGRDISGEVAAVGAS 106
              P   P +VLVR     +   D  + +   GR  F  P  P   G +  G V A+G  
Sbjct: 12  HPRPTPGPGQVLVRVEGCGVCGSD--LPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPG 69

Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
           VR L VG  V G        G +A+Y +   D   P P     +      F        L
Sbjct: 70  VRGLAVGDRVAG-----LSGGAFAEYDLADADHAVPLP-----SLLDGQAFPG----EPL 115

Query: 167 KCA------ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA--- 217
            CA        +  G+ + V+ G G +G   +Q + A+G               LA    
Sbjct: 116 GCALNVFRRGWIRAGKTVAVI-GAGFIGLLFLQLAAAAGARRVI--AIDRRPARLALARE 172

Query: 218 -GAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET 271
            GA + V   S+ I     EL      D V++ +G      L    +   G  +      
Sbjct: 173 LGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVI----- 227

Query: 272 AALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIR---RLSETG 328
                 +G     P           QTW   GID      R    GLE +R   +L   G
Sbjct: 228 ------FGYHQDGPRPVP------FQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADG 275

Query: 329 KLK--IPVDKTFHMTQVREAHEAKDKR 353
           +L     +   F + ++ +A EA  +R
Sbjct: 276 RLDLGSLLTHEFPLEELGDAFEAARRR 302

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 11/81 (13%)

Query: 43  LEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM----RSGYGRSIFEPLL---PLILGRD 95
           L V  +V VP+LKP+E+L+R +A  I   D  +    + GY   I  P L   P+++G +
Sbjct: 39  LRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGY---ILYPGLTEFPVVIGHE 94

Query: 96  ISGEVAAVGASVRSLTVGQEV 116
            SG V   G +V++   G  V
Sbjct: 95  FSGVVEKTGKNVKNFEKGDPV 115

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 11/89 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGY-GRSIFEPL 87
           +AVV   +GGP  + V  +V  P ++ P + +VR    +I   D  M   Y GR+  EP 
Sbjct: 2   KAVV---YGGPGNVAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHM---YRGRTGAEP- 53

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV 116
             L+LG +  GEV  VG++V SL VG  V
Sbjct: 54  -GLVLGHEAMGEVEEVGSAVESLKVGDRV 81

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
            C+A V    G P V+E    +EV   K NEV ++  A S+   D     G+  ++F   
Sbjct: 2   KCKAAVAWEAGKPLVIE---EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLF--- 55

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV 116
            P+ILG + +G V +VG  V +L  G +V
Sbjct: 56  -PVILGHEGAGIVESVGEGVTNLKPGDKV 83

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 83/340 (24%), Positives = 132/340 (38%), Gaps = 67/340 (19%)

Query: 30  RAVVLPRF--GGPEV--LEVRPN---VEVPDLKPNEVLVRTRAVSINP-LDTRMRSGYGR 81
           + V+L  +  G P+   LE+R     ++VP     +VLV+   +S +P +  RM+     
Sbjct: 4   KQVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS 63

Query: 82  SIFEPLLPLILGRDISG-EVAAVGASVR-SLTVGQEVFGALHPTAVRGTYADYAVLSEDE 139
               P  P   G  I+G  VA V  S      VG  V+G          + +Y+++    
Sbjct: 64  LYLPPFKP---GEVITGYGVAKVVDSGNPDFKVGDLVWGFTG-------WEEYSLI---- 109

Query: 140 LTPKPVSVTHADASAIPF---------AALTAWRALKCAARMSEGQRLLVLGGGGAVGFA 190
             P+   +   D + +P            LTA+       +  +G+ + V    GAVG  
Sbjct: 110 --PRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQL 167

Query: 191 AVQFSVASGCHVSATCGSKSIDRVLAA--GAEQAVDYSS-KDIELAIKGKF----DAVLD 243
             Q +   GC+V  + GS     +L    G + A +Y    D++ A+K  F    D   D
Sbjct: 168 VGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFD 227

Query: 244 TIGAPETERLGLNFLKRGGHYMTLHGETAA--------LADHYGLALGLPIATTVLLKKR 295
            +G    + + LN        M LHG  AA        L    G+   L        + +
Sbjct: 228 NVGGKMLDAVLLN--------MNLHGRIAACGMISQYNLEWPEGVR-NLLNIIYK--RVK 276

Query: 296 MQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVD 335
           +Q +     DY + Y     E LEE+    + GKLK   D
Sbjct: 277 IQGFLVG--DYLHRY----PEFLEEMSGYIKEGKLKYVED 310

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 66/281 (23%), Positives = 104/281 (37%), Gaps = 70/281 (24%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK---PNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           +AVV   F GP  + V    EVP  +   P + +V+  A +I   D  +  G+  S    
Sbjct: 2   KAVV---FKGPGDVRV---EEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS---- 51

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEV---------------------------FGA 119
               +LG +  GEV  VG  VR+L VG  V                           FG 
Sbjct: 52  TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGY 111

Query: 120 LHPTAVRGTYADY-AV-LSEDELTPKPVSVTHADASAIPFAAL--TAWRALKCAARMSEG 175
                + G  A+Y  V  ++  L   P  ++  D +A+    +  T +   K  A++  G
Sbjct: 112 AGSPNLDGAQAEYVRVPFADGTLLKLPDGLS--DEAALLLGDILPTGYFGAK-RAQVRPG 168

Query: 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDRV---LAAGAEQ-AVDYSSK 228
             + V+G G  VG  AV          +   G+     +D V   L   A   A   + +
Sbjct: 169 DTVAVIGCG-PVGLCAVL--------SAQVLGAARVFAVDPVPERLERAAALGAEPINFE 219

Query: 229 DIELAIKGK-------FDAVLDTIGAPETERLGLNFLKRGG 262
           D E   + +        D VL+ +G      L  + ++ GG
Sbjct: 220 DAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGG 260

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 32/220 (14%)

Query: 49  VEVPDLKPN-EVLVRTRAVSINP-LDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
             +PD     +VLVRT  +S++P +  RM    G      L P  L + + G    VG  
Sbjct: 28  CTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDY---LAPWQLSQVLDG--GGVGVV 82

Query: 107 VRS----LTVGQEVFGALHPTAVRGTYADYAVLSEDEL---TPKPV--SVTHADASAIPF 157
             S      VG  V      T+    +  YAVL    L    P+ V   +++    A+  
Sbjct: 83  EESKHQKFAVGDIV------TSFNWPWQTYAVLDGSSLEKVDPQLVDGHLSYF-LGAVGL 135

Query: 158 AALTAWRALKCAARMSEG--QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRV 214
             LTA   ++    ++ G  Q ++V G  GA G  A Q     GC  V   CGS    ++
Sbjct: 136 PGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQL 195

Query: 215 LAA--GAEQAVDYSSKDIELAIK----GKFDAVLDTIGAP 248
           L +  G + A++Y + ++   ++       D   D +G  
Sbjct: 196 LKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE 235

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|225056 COG2145, ThiM, Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 102 AVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
            VGA+        E+   + P A+RG  ++ A L+ +    K V      A AI  A   
Sbjct: 94  GVGATKFRTKFALELLAEVKPAAIRGNASEIAALAGEAGGGKGVDAGDGAADAIEAAKKA 153

Query: 162 AWRALKCAARM-------SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
           A +       +       S+G R++V+  G  +    +     +GC + A   +
Sbjct: 154 A-QKYGTVVVVTGEVDYISDGTRVVVIHNGSPL-LGKI---TGTGCLLGAVVAA 202

Length = 265

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 64/262 (24%), Positives = 95/262 (36%), Gaps = 64/262 (24%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP----LILGRDISGEVAAV 103
              +P   PN+ +VR  AV+    D          ++         +ILG +  G V  V
Sbjct: 16  EKPIPVCGPNDAIVRPTAVAPCTSDVHT-------VWGGAPGERHGMILGHEAVGVVEEV 68

Query: 104 GASVRSLTVGQEVF-GALHP-------------------------TAVRGTYADYAVLSE 137
           G+ V+    G  V   A+ P                             G +A+Y  +++
Sbjct: 69  GSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVND 128

Query: 138 DE--LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
            +  L P P  +T   A  +P    T +   +  A +  G  + V  G G VG  AV   
Sbjct: 129 ADANLAPLPDGLTDEQAVMLPDMMSTGFHGAE-LANIKLGDTVAVF-GIGPVGLMAV--- 183

Query: 196 VASGCHVSATCGSKSI-------DRVLAA---GAEQAVDYSSKDIELAIK----GK-FDA 240
             +G  +    G+  I       +RV  A   GA   VDY + D+   I     GK  DA
Sbjct: 184 --AGARL---RGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDA 238

Query: 241 VLDTIGAPETERLGLNFLKRGG 262
           V+   G  +T    L  LK GG
Sbjct: 239 VIIAGGGQDTFEQALKVLKPGG 260

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 54/222 (24%), Positives = 81/222 (36%), Gaps = 67/222 (30%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL   G P  +E    +E+ D K  EVLV+  A  +   D  + +G    +  P  P
Sbjct: 3   KAAVLWGPGQPWEVE---EIELDDPKAGEVLVKLVASGLCHSDEHLVTG---DLPMPRYP 56

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF-----------------------GA------- 119
           ++ G + +G V  VG  V  +  G  V                        GA       
Sbjct: 57  ILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQ 116

Query: 120 --------------LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AAL--- 160
                         +    + GT+++Y V+ E        SV   D   IP   A L   
Sbjct: 117 ISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEA-------SVVKIDDD-IPLDKACLVGC 168

Query: 161 ---TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG 199
              T W +    A +  G  ++V+G GG VG  AVQ +  +G
Sbjct: 169 GVPTGWGSAVNIADVRPGDTVVVMGIGG-VGINAVQGAAVAG 209

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 11/88 (12%)

Query: 39  GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTR----MRSGYGRSIFEPLLPLILGR 94
           G   L+++P  ++P L P++V VR +AV I   D      MR       F    P+++G 
Sbjct: 25  GVNTLKIQP-FKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCAD----FVVKEPMVIGH 79

Query: 95  DISGEVAAVGASVRSLTVGQEVFGALHP 122
           + +G +  VG+ V+ L VG  V  AL P
Sbjct: 80  ECAGIIEEVGSEVKHLVVGDRV--ALEP 105

Length = 364

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 177 RLLVLGGGGAVGFAAVQFSVASGCHVS-ATCGSKSIDRVLAAGAEQ-AVD-YSSKDIELA 233
           ++L++GG   +G A V+  +A+G  V+    G    D  L  G E    D      +E  
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD--LPEGVEHIVGDRNDRDALEEL 59

Query: 234 IKGK-FDAVLDTIG--APETERLGLNFLKRGGHY 264
           + G+ FD V+DTI     + ER    F  R   Y
Sbjct: 60  LGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQY 93

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A VL     P  +E    +EV   K +EV ++  A  I   D  + SG          
Sbjct: 8   CKAAVLWEPKKPFSIE---EIEVAPPKAHEVRIKIVATGICRSDDHVVSG----KLVTPF 60

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV 116
           P+ILG + +G V +VG  V ++  G +V
Sbjct: 61  PVILGHEAAGIVESVGEGVTTVKPGDKV 88

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 38/231 (16%)

Query: 39  GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISG 98
            P    V+  VE+P+L   +V+V+     +   D        R+      PL LG +ISG
Sbjct: 6   EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHAL--PLALGHEISG 63

Query: 99  EVAAVGASVRSLTVGQEVF-GALHP----------------------TAVRGTYADYAVL 135
            V   GA   S  +G+ V   A+ P                        ++G +A + V+
Sbjct: 64  RVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVV 122

Query: 136 SE------DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF 189
                   DE       +     S +  A  T ++A    A + +G  ++V+G GG  G+
Sbjct: 123 PAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGY 181

Query: 190 AAVQFSVASGCHVSAT-CGSKSIDRVLAAGAE---QAVDYSSKDIELAIKG 236
             VQ + A G  V A     + ++ +   GA+      D S+++++  IK 
Sbjct: 182 -MVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKA 231

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	364
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.98
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.76
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.63
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.55
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.44
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.18
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.42
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.27
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.24
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.13
PLN02494	477	adenosylhomocysteinase	98.12
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.07
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.01
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.9
PRK08324	681	short chain dehydrogenase; Validated	97.83
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.77
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.75
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.71
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.7
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.6
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.51
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.46
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.36
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.31
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.26
PRK12742	237	oxidoreductase; Provisional	97.26
PRK05693	274	short chain dehydrogenase; Provisional	97.25
PRK05993	277	short chain dehydrogenase; Provisional	97.21
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.2
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.17
PLN03209	576	translocon at the inner envelope of chloroplast su	97.15
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.08
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.07
PRK06182	273	short chain dehydrogenase; Validated	97.04
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.04
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.03
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.01
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.0
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.98
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.97
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.96
PRK08265	261	short chain dehydrogenase; Provisional	96.93
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.92
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.92
PRK07109	334	short chain dehydrogenase; Provisional	96.91
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.91
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.87
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.87
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.87
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.84
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.84
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.83
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.82
PRK07806	248	short chain dehydrogenase; Provisional	96.77
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.73
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.72
COG2910	211	Putative NADH-flavin reductase [General function p	96.71
PRK05872	296	short chain dehydrogenase; Provisional	96.7
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.68
CHL00194	317	ycf39 Ycf39; Provisional	96.68
PRK06139	330	short chain dehydrogenase; Provisional	96.64
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.63
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.61
PRK07326	237	short chain dehydrogenase; Provisional	96.58
PRK08339	263	short chain dehydrogenase; Provisional	96.58
PRK07060	245	short chain dehydrogenase; Provisional	96.55
PRK06128	300	oxidoreductase; Provisional	96.55
PRK07832	272	short chain dehydrogenase; Provisional	96.54
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.53
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.52
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.51
PRK12367	245	short chain dehydrogenase; Provisional	96.5
PRK12939	250	short chain dehydrogenase; Provisional	96.49
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.49
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.48
PRK07985	294	oxidoreductase; Provisional	96.47
PRK06057	255	short chain dehydrogenase; Provisional	96.47
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.47
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.45
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.43
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
PRK06500	249	short chain dehydrogenase; Provisional	96.42
PRK06484	520	short chain dehydrogenase; Validated	96.42
PRK09186	256	flagellin modification protein A; Provisional	96.42
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.42
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.4
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	96.4
PRK12829	264	short chain dehydrogenase; Provisional	96.36
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.34
PRK07825	273	short chain dehydrogenase; Provisional	96.34
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.29
PRK08267	260	short chain dehydrogenase; Provisional	96.28
PRK07831	262	short chain dehydrogenase; Provisional	96.28
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.27
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.27
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.27
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.27
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.26
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.26
PRK06841	255	short chain dehydrogenase; Provisional	96.24
PRK06196	315	oxidoreductase; Provisional	96.24
PRK08589	272	short chain dehydrogenase; Validated	96.23
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.22
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.22
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.2
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.2
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.2
PRK12828	239	short chain dehydrogenase; Provisional	96.19
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.17
PRK06179	270	short chain dehydrogenase; Provisional	96.17
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
PRK07063	260	short chain dehydrogenase; Provisional	96.15
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.15
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.14
PRK07814	263	short chain dehydrogenase; Provisional	96.14
PRK06483	236	dihydromonapterin reductase; Provisional	96.12
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.11
PRK06180	277	short chain dehydrogenase; Provisional	96.1
PRK07576	264	short chain dehydrogenase; Provisional	96.1
PRK05866	293	short chain dehydrogenase; Provisional	96.09
PRK06949	258	short chain dehydrogenase; Provisional	96.08
PRK05717	255	oxidoreductase; Validated	96.08
PRK09072	263	short chain dehydrogenase; Provisional	96.07
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.07
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.06
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.06
PRK07062	265	short chain dehydrogenase; Provisional	96.06
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.06
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.06
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.04
PRK08263	275	short chain dehydrogenase; Provisional	96.03
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.01
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.01
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.98
PRK05854	313	short chain dehydrogenase; Provisional	95.98
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.98
PRK05867	253	short chain dehydrogenase; Provisional	95.97
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.95
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.94
PRK06194	287	hypothetical protein; Provisional	95.92
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.91
PRK07478	254	short chain dehydrogenase; Provisional	95.91
PRK08017	256	oxidoreductase; Provisional	95.9
PLN02253	280	xanthoxin dehydrogenase	95.9
PRK12937	245	short chain dehydrogenase; Provisional	95.89
PRK06523	260	short chain dehydrogenase; Provisional	95.89
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.89
PRK05876	275	short chain dehydrogenase; Provisional	95.88
PRK08177	225	short chain dehydrogenase; Provisional	95.88
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.87
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.86
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.86
PRK07856	252	short chain dehydrogenase; Provisional	95.85
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.85
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.84
PRK07890	258	short chain dehydrogenase; Provisional	95.84
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.84
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.83
PRK09291	257	short chain dehydrogenase; Provisional	95.82
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.81
PRK13243	333	glyoxylate reductase; Reviewed	95.79
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.79
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.78
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.77
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.76
PRK07904	253	short chain dehydrogenase; Provisional	95.75
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.74
PRK06484	520	short chain dehydrogenase; Validated	95.73
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.72
KOG0725	270	consensus Reductases with broad range of substrate	95.71
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.7
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.7
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.69
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.66
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.63
PRK06114	254	short chain dehydrogenase; Provisional	95.6
PRK06398	258	aldose dehydrogenase; Validated	95.59
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.59
PRK07677	252	short chain dehydrogenase; Provisional	95.58
PRK07067	257	sorbitol dehydrogenase; Provisional	95.58
PRK06138	252	short chain dehydrogenase; Provisional	95.56
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.56
PRK04148	134	hypothetical protein; Provisional	95.56
PRK06172	253	short chain dehydrogenase; Provisional	95.56
PLN02928	347	oxidoreductase family protein	95.55
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.55
PRK07454	241	short chain dehydrogenase; Provisional	95.54
PRK07024	257	short chain dehydrogenase; Provisional	95.54
PRK09242	257	tropinone reductase; Provisional	95.52
PRK08628	258	short chain dehydrogenase; Provisional	95.52
PRK06198	260	short chain dehydrogenase; Provisional	95.52
PRK06197	306	short chain dehydrogenase; Provisional	95.51
PRK08303	305	short chain dehydrogenase; Provisional	95.51
PRK08643	256	acetoin reductase; Validated	95.5
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	95.5
PRK06181	263	short chain dehydrogenase; Provisional	95.48
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.47
PRK08226	263	short chain dehydrogenase; Provisional	95.47
PRK08862	227	short chain dehydrogenase; Provisional	95.47
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	95.46
PRK07774	250	short chain dehydrogenase; Provisional	95.46
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	95.46
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.45
PRK12743	256	oxidoreductase; Provisional	95.45
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.43
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.42
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.41
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.41
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.39
PRK07791	286	short chain dehydrogenase; Provisional	95.38
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.35
PRK06125	259	short chain dehydrogenase; Provisional	95.33
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.33
PRK06720	169	hypothetical protein; Provisional	95.3
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.29
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.25
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.23
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.22
PRK08278	273	short chain dehydrogenase; Provisional	95.21
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.2
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	95.18
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.17
PRK10538	248	malonic semialdehyde reductase; Provisional	95.17
PRK07035	252	short chain dehydrogenase; Provisional	95.16
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.13
PRK05884	223	short chain dehydrogenase; Provisional	95.13
PRK06953	222	short chain dehydrogenase; Provisional	95.13
PRK06914	280	short chain dehydrogenase; Provisional	95.13
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.13
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.12
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	95.11
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.11
PRK07574	385	formate dehydrogenase; Provisional	95.08
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.08
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.07
PRK05875	276	short chain dehydrogenase; Provisional	95.06
PRK06482	276	short chain dehydrogenase; Provisional	95.06
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.04
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.03
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.01
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.99
PLN00016	378	RNA-binding protein; Provisional	94.97
PRK08264	238	short chain dehydrogenase; Validated	94.97
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.94
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	94.92
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	94.92
TIGR00438	188	rrmJ cell division protein FtsJ.	94.91
PRK07069	251	short chain dehydrogenase; Validated	94.91
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.89
PLN03075	296	nicotianamine synthase; Provisional	94.89
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.87
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.87
PRK09135	249	pteridine reductase; Provisional	94.86
PLN03139	386	formate dehydrogenase; Provisional	94.85
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.84
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.83
PRK08703	239	short chain dehydrogenase; Provisional	94.81
PRK08251	248	short chain dehydrogenase; Provisional	94.8
PRK11579	346	putative oxidoreductase; Provisional	94.8
PLN02780	320	ketoreductase/ oxidoreductase	94.8
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	94.79
PRK12747	252	short chain dehydrogenase; Provisional	94.78
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	94.77
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	94.76
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	94.74
PRK07074	257	short chain dehydrogenase; Provisional	94.74
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.73
PRK07023	243	short chain dehydrogenase; Provisional	94.71
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.71
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.65
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.64
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.63
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	94.6
PRK09134	258	short chain dehydrogenase; Provisional	94.6
PRK07775	274	short chain dehydrogenase; Provisional	94.58
PRK08936	261	glucose-1-dehydrogenase; Provisional	94.57
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	94.56
PRK08655	437	prephenate dehydrogenase; Provisional	94.56
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.55
PRK06701	290	short chain dehydrogenase; Provisional	94.53
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.52
PRK07402	196	precorrin-6B methylase; Provisional	94.51
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.5
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	94.48
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	94.47
KOG1252	362	consensus Cystathionine beta-synthase and related	94.45
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.45
PRK14967	223	putative methyltransferase; Provisional	94.41
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.41
PRK08317	241	hypothetical protein; Provisional	94.39
PRK07577	234	short chain dehydrogenase; Provisional	94.37
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	94.37
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.36
PLN02256	304	arogenate dehydrogenase	94.35
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.34
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.32
PRK06436	303	glycerate dehydrogenase; Provisional	94.3
PRK14982	340	acyl-ACP reductase; Provisional	94.3
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.29
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	94.28
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.28
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.26
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	94.26
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.25
PRK05650	270	short chain dehydrogenase; Provisional	94.23
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	94.23
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.23
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.2
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.17
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.16
PRK06487	317	glycerate dehydrogenase; Provisional	94.12
PLN02214	342	cinnamoyl-CoA reductase	94.11
PRK06932	314	glycerate dehydrogenase; Provisional	94.09
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	94.07
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.03
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.01
COG4122	219	Predicted O-methyltransferase [General function pr	94.0
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	93.99
PRK12935	247	acetoacetyl-CoA reductase; Provisional	93.99
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	93.98
PLN02695	370	GDP-D-mannose-3',5'-epimerase	93.95
PRK12548	289	shikimate 5-dehydrogenase; Provisional	93.93
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	93.92
TIGR02415	254	23BDH acetoin reductases. One member of this famil	93.91
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	93.9
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.89
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	93.89
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	93.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	93.88
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	93.86
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.86
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	93.85
PLN00203	519	glutamyl-tRNA reductase	93.85
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.84
PRK07340	304	ornithine cyclodeaminase; Validated	93.84
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.82
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	93.8
PRK06940	275	short chain dehydrogenase; Provisional	93.79
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	93.77
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	93.77
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.77
PRK05855	582	short chain dehydrogenase; Validated	93.7
PRK12744	257	short chain dehydrogenase; Provisional	93.67
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	93.67
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.66
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	93.65
PRK08618	325	ornithine cyclodeaminase; Validated	93.64
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	93.63
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.6
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	93.58
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.47
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	93.45
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	93.43
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	93.43
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	93.42
PRK10258	251	biotin biosynthesis protein BioC; Provisional	93.4
PRK08219	227	short chain dehydrogenase; Provisional	93.39
PRK12480	330	D-lactate dehydrogenase; Provisional	93.39
PRK05599	246	hypothetical protein; Provisional	93.39
PRK10669	558	putative cation:proton antiport protein; Provision	93.38
PRK11207	197	tellurite resistance protein TehB; Provisional	93.35
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.35
PRK06101	240	short chain dehydrogenase; Provisional	93.34
PRK05562	223	precorrin-2 dehydrogenase; Provisional	93.33
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.33
PLN02366	308	spermidine synthase	93.32
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	93.3
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	93.28
PLN00198	338	anthocyanidin reductase; Provisional	93.28
PRK05479	330	ketol-acid reductoisomerase; Provisional	93.26
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.25
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	93.24
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	93.22

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=8.7e-59  Score=412.13  Aligned_cols=313  Identities=31%  Similarity=0.438  Sum_probs=280.8

Q ss_pred             ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      +.+|||+++.+++++  ++++ +++.|+|+|+||+|+|.|||+|+||++.++|.   |....+|+++|||.+|+|+++|+
T Consensus         1 ~~~mkA~~~~~~~~p--l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~---~~~~~~P~ipGHEivG~V~~vG~   74 (339)
T COG1064           1 MMTMKAAVLKKFGQP--LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGD---WPVPKLPLIPGHEIVGTVVEVGE   74 (339)
T ss_pred             CcceEEEEEccCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCC---CCCCCCCccCCcceEEEEEEecC
Confidence            368999999999988  8999 99999999999999999999999999999997   44456999999999999999999


Q ss_pred             CCCCCCCCCEEEE-ecC-----------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHH
Q 017901          106 SVRSLTVGQEVFG-ALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT  161 (364)
Q Consensus       106 ~~~~~~~Gd~V~~-~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  161 (364)
                      +|+.|++||||.. ...                       .+..+|+|+||+++|+++++++|+++++.+||.+.|++.|
T Consensus        75 ~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT  154 (339)
T COG1064          75 GVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGIT  154 (339)
T ss_pred             CCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeee
Confidence            9999999999987 221                       1248999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccE
Q 017901          162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDA  240 (364)
Q Consensus       162 a~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~  240 (364)
                      .|++| ++.+++||++|+|.| .|++|++++|+|+++|++|+++++++++ +.++++|++++++.++.+..+.+++.+|+
T Consensus       155 ~y~al-k~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~  232 (339)
T COG1064         155 TYRAL-KKANVKPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADA  232 (339)
T ss_pred             Eeeeh-hhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcE
Confidence            99999 569999999999999 6799999999999999999999998886 88999999999998877777777755999


Q ss_pred             EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE  320 (364)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (364)
                      ++|+++ +.++..++++|+++|+++.+|...           ..+     ....+...+..+++++.|+... ++.++++
T Consensus       233 ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~-----------~~~-----~~~~~~~~li~~~~~i~GS~~g-~~~d~~e  294 (339)
T COG1064         233 IIDTVG-PATLEPSLKALRRGGTLVLVGLPG-----------GGP-----IPLLPAFLLILKEISIVGSLVG-TRADLEE  294 (339)
T ss_pred             EEECCC-hhhHHHHHHHHhcCCEEEEECCCC-----------Ccc-----cCCCCHHHhhhcCeEEEEEecC-CHHHHHH
Confidence            999999 669999999999999999999761           001     1122333578899999999976 6899999


Q ss_pred             HHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ++++..+|+++|.+.+.++|+|+++||+.|++++..|++||++.
T Consensus       295 ~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         295 ALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            99999999999998789999999999999999999999999874

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=4e-52  Score=378.80  Aligned_cols=314  Identities=34%  Similarity=0.534  Sum_probs=268.7

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |+++++.++++++.++++ +.|.|.|++|||+|||.|+|||+.|...+.|..  ....++|+++|.|++|+|+++|++++
T Consensus         1 mka~~~~~~g~~~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~--~~~~~~P~i~G~d~aG~V~avG~~V~   77 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA--PPVRPLPFIPGSEAAGVVVAVGSGVT   77 (326)
T ss_pred             CeEEEEeccCCCceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC--CCCCCCCCcccceeEEEEEEeCCCCC
Confidence            789999999999889999 999999999999999999999999999999962  22346899999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      .|++||||+.... ...+|+|+||+++|.+.++++|+++++++||+++++++|||+++....++++|++|||+||+|++|
T Consensus        78 ~~~~GdrV~~~~~-~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG  156 (326)
T COG0604          78 GFKVGDRVAALGG-VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVG  156 (326)
T ss_pred             CcCCCCEEEEccC-CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHH
Confidence            9999999999851 003699999999999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCc-cHHHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCCC
Q 017901          189 FAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGG  262 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G  262 (364)
                      ++++|+||++|+.++++++++ +.++++++|++++++|.+.++.+.++    | ++|+|||++|++ .+..++++|+++|
T Consensus       157 ~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G  235 (326)
T COG0604         157 SAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPGG  235 (326)
T ss_pred             HHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccCC
Confidence            999999999997766665544 45789999999999999988888886    2 399999999998 9999999999999


Q ss_pred             EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceecccee
Q 017901          263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIPVDKT  337 (364)
Q Consensus       263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~~~~~  337 (364)
                      +++.+|...+          + +     ...++...++.+.+...+......     .+.++++.+++.+|++++.+.++
T Consensus       236 ~lv~ig~~~g----------~-~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~  299 (326)
T COG0604         236 RLVSIGALSG----------G-P-----PVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRV  299 (326)
T ss_pred             EEEEEecCCC----------C-C-----ccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccE
Confidence            9999998621          0 1     111222345666777777665433     56788899999999999999999


Q ss_pred             eccccHHHHHHHHhc-CCCCCeEEEEc
Q 017901          338 FHMTQVREAHEAKDK-RLIPGKVVLEF  363 (364)
Q Consensus       338 ~~l~~~~eA~~~~~~-~~~~gkvvi~~  363 (364)
                      |||+|..+|..+... ++..||+|+++
T Consensus       300 ~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         300 YPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             echhhhHHHHHHHHcccCCcceEEEeC
Confidence            999996555554444 48889999974

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=7.8e-51  Score=337.25  Aligned_cols=317  Identities=28%  Similarity=0.375  Sum_probs=273.0

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      .|...+.++++++|+.++++++ +.|.|+|.|+|++||-.|+|+|.-|.....|.+.   +.+.|++||.|++|+|+++|
T Consensus         5 ~p~~~k~i~v~e~Ggydvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG   80 (336)
T KOG1197|consen    5 SPPLLKCIVVTEFGGYDVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVG   80 (336)
T ss_pred             CCchheEEEEeccCCcceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEec
Confidence            4666789999999999999999 9999999999999999999999999999999753   45889999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCC
Q 017901          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~  184 (364)
                      ++++++++||||....+    .|.|+++..+|...++++|+.+++.+||++...++|||.-+++..++++|++||++.|+
T Consensus        81 ~gvtdrkvGDrVayl~~----~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAA  156 (336)
T KOG1197|consen   81 EGVTDRKVGDRVAYLNP----FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAA  156 (336)
T ss_pred             CCccccccccEEEEecc----chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence            99999999999999875    69999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc------CCccEEEECCCCchhHHHHHhh
Q 017901          185 GAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK------GKFDAVLDTIGAPETERLGLNF  257 (364)
Q Consensus       185 g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~------g~~D~vid~~g~~~~~~~~~~~  257 (364)
                      |++|++++|++|..|+++|++++.+++ +.+++.|++++++++.+|+.+++.      | +|+++|.+|.+ ++...+.+
T Consensus       157 GGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKG-Vd~vyDsvG~d-t~~~sl~~  234 (336)
T KOG1197|consen  157 GGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKG-VDAVYDSVGKD-TFAKSLAA  234 (336)
T ss_pred             ccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCC-ceeeeccccch-hhHHHHHH
Confidence            999999999999999999999877665 889999999999999999999887      5 99999999998 99999999


Q ss_pred             ccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC--HHHHHHHHHHHHcCCceeccc
Q 017901          258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD--AEGLEEIRRLSETGKLKIPVD  335 (364)
Q Consensus       258 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~  335 (364)
                      |++.|.+|++|...+       +.  +|.+   ...++...+..-..+..|....+.  .....+++.++.+|.+++.|.
T Consensus       235 Lk~~G~mVSfG~asg-------l~--~p~~---l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~  302 (336)
T KOG1197|consen  235 LKPMGKMVSFGNASG-------LI--DPIP---LNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHID  302 (336)
T ss_pred             hccCceEEEeccccC-------CC--CCee---hhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeee
Confidence            999999999997622       11  1111   111111112222222223221110  224566788888999999999


Q ss_pred             eeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          336 KTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       336 ~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++|||+++.+|+.+++++++.||+++.+
T Consensus       303 ~~ypls~vadA~~diesrktvGkvlLlp  330 (336)
T KOG1197|consen  303 HVYPLSKVADAHADIESRKTVGKVLLLP  330 (336)
T ss_pred             eecchHHHHHHHHHHHhhhccceEEEeC
Confidence            9999999999999999999999999865

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.7e-51  Score=348.69  Aligned_cols=316  Identities=23%  Similarity=0.258  Sum_probs=274.0

Q ss_pred             cccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEe
Q 017901           23 FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (364)
Q Consensus        23 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (364)
                      ..+|++.++|.+..+++...+++. ++++|+++++||+|+++|||||+||++.+.|.   |....+|+++|||++|+|++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gd---wg~s~~PlV~GHEiaG~Vvk   79 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGD---WGLSKYPLVPGHEIAGVVVK   79 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhcc---CCcccCCccCCceeeEEEEE
Confidence            457899999999999997778889 99999999999999999999999999999996   44568999999999999999


Q ss_pred             ecCCCCCCCCCCEEEEec-------------------------------CCCCCCCcceeEEeecCCccccCCCCCChhh
Q 017901          103 VGASVRSLTVGQEVFGAL-------------------------------HPTAVRGTYADYAVLSEDELTPKPVSVTHAD  151 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~-------------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~  151 (364)
                      +|++|++|++||||-.=.                               ..+-..|+||+|+++++..+++||+++++++
T Consensus        80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~  159 (360)
T KOG0023|consen   80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLAS  159 (360)
T ss_pred             ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhh
Confidence            999999999999995310                               0112567799999999999999999999999


Q ss_pred             hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCC-Ch
Q 017901          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYS-SK  228 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~-~~  228 (364)
                      ||.+.|++.|+|.+| ...++.||+++.|.|+ |++|.+++|+|+++|.+|+++.++.+  .+.++.+|++..++.. +.
T Consensus       160 aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~  237 (360)
T KOG0023|consen  160 AAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP  237 (360)
T ss_pred             ccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence            999999999999999 5688899999999995 55999999999999999999988753  3667889999988877 77


Q ss_pred             hHHHHhcCCccEEEECCC--CchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeE
Q 017901          229 DIELAIKGKFDAVLDTIG--APETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDY  306 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (364)
                      ++.+.+.+-.|.++|++.  ....+..++.+++.+|++|++|.+..                  .+.+..+.+..+.+.+
T Consensus       238 d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~------------------~~~~~~~~lil~~~~I  299 (360)
T KOG0023|consen  238 DIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEK------------------PLKLDTFPLILGRKSI  299 (360)
T ss_pred             HHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCC------------------cccccchhhhcccEEE
Confidence            888877743677777776  55589999999999999999998611                  2233334678889999


Q ss_pred             EEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          307 SYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      .|+... ++.+.++++++..++.+++.+. ..+++++++||+.+++++..+|.|+++.
T Consensus       300 ~GS~vG-~~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  300 KGSIVG-SRKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             Eeeccc-cHHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence            999987 6889999999999999988765 8999999999999999999999999863

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.8e-49  Score=337.52  Aligned_cols=312  Identities=23%  Similarity=0.275  Sum_probs=260.1

Q ss_pred             ccceeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      .++|+|+++.   ++..++++ +.|.|++ .|+||+|++.++|||+||+|.|........-.+.|+++|||.+|+|.++|
T Consensus         2 ~~~~~A~vl~---g~~di~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG   77 (354)
T KOG0024|consen    2 AADNLALVLR---GKGDIRIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG   77 (354)
T ss_pred             CcccceeEEE---ccCceeEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence            5679999999   45558999 9999976 99999999999999999999997654333334689999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHH
Q 017901          105 ASVRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL  160 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  160 (364)
                      ++|+++++||||..-+..                        .-.+|++++|++.+++.|+|+|++++++++|.+- ++.
T Consensus        78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLs  156 (354)
T KOG0024|consen   78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLS  156 (354)
T ss_pred             ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chh
Confidence            999999999999764321                        1367999999999999999999999999998884 377


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEee-CCccHHHHHHcCCceeeeCCCh----hHHHHh
Q 017901          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATC-GSKSIDRVLAAGAEQAVDYSSK----DIELAI  234 (364)
Q Consensus       161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~-~~~~~~~~~~~g~~~v~~~~~~----~~~~~i  234 (364)
                      ++|||. +++++++|++|||.| +|++|+++...|+.+|+ +|+.+. ...+++.++++|++.+.+....    ++.+.+
T Consensus       157 V~~HAc-r~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v  234 (354)
T KOG0024|consen  157 VGVHAC-RRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELV  234 (354)
T ss_pred             hhhhhh-hhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHH
Confidence            999998 789999999999999 89999999999999999 566664 4445599999999987766553    233333


Q ss_pred             c---C--CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEE
Q 017901          235 K---G--KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI  309 (364)
Q Consensus       235 ~---g--~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (364)
                      .   |  .+|+.|||+|...+++.++.+++.+|+++..|.-              ..    ..+++......+++++.|.
T Consensus       235 ~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g--------------~~----~~~fpi~~v~~kE~~~~g~  296 (354)
T KOG0024|consen  235 EKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMG--------------AE----EIQFPIIDVALKEVDLRGS  296 (354)
T ss_pred             HhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccC--------------CC----ccccChhhhhhheeeeeee
Confidence            3   2  3899999999988999999999999999999853              11    2233344678899999998


Q ss_pred             EeccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCC-CeEEEEc
Q 017901          310 YMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIP-GKVVLEF  363 (364)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~-gkvvi~~  363 (364)
                      +-+ ...++..+++++++|++++  ++|+.|+++++.|||+.+..++.. -|+++..
T Consensus       297 fry-~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~  352 (354)
T KOG0024|consen  297 FRY-CNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITG  352 (354)
T ss_pred             eee-ccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeC
Confidence            843 4668999999999999875  699999999999999998887753 3888875

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2.4e-47  Score=331.54  Aligned_cols=310  Identities=26%  Similarity=0.332  Sum_probs=264.8

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      .++|++..+++.|  +.++ ++.+++|++|||+||+.|+|+|+||.+..+|..|.    .+|.++|||++|+|++||++|
T Consensus         2 k~~aAV~~~~~~P--l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~----~~P~vLGHEgAGiVe~VG~gV   74 (366)
T COG1062           2 KTRAAVAREAGKP--LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE----GFPAVLGHEGAGIVEAVGEGV   74 (366)
T ss_pred             CceEeeeecCCCC--eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC----CCceecccccccEEEEecCCc
Confidence            4789999998888  9999 99999999999999999999999999999996543    599999999999999999999


Q ss_pred             CCCCCCCEEEEecCCC------------------------------------------C--CCCcceeEEeecCCccccC
Q 017901          108 RSLTVGQEVFGALHPT------------------------------------------A--VRGTYADYAVLSEDELTPK  143 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~------------------------------------------~--~~g~~~~~~~~~~~~~~~i  143 (364)
                      +.+++||+|+......                                          .  ..++|++|.+++..+++|+
T Consensus        75 t~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki  154 (366)
T COG1062          75 TSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKI  154 (366)
T ss_pred             cccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEEC
Confidence            9999999998754310                                          1  2348999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHHcCCce
Q 017901          144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQ  221 (364)
Q Consensus       144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~~g~~~  221 (364)
                      +++.+++.++.+.|..+|.+.+..+.+++++|+++.|.| .|++|++++|-|+..|+ ++|++..++. +++++++|+++
T Consensus       155 ~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~  233 (366)
T COG1062         155 DPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATH  233 (366)
T ss_pred             CCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCce
Confidence            999999999999999999999988999999999999999 99999999999999999 7888866555 49999999999


Q ss_pred             eeeCCCh-hHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh
Q 017901          222 AVDYSSK-DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (364)
Q Consensus       222 v~~~~~~-~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (364)
                      ++|.++. ++.+.+.    +.+|++|||+|+...+++++.++.++|+.+.+|....          +...      +.+.
T Consensus       234 ~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----------~~~i------~~~~  297 (366)
T COG1062         234 FVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----------GQEI------STRP  297 (366)
T ss_pred             eecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----------Ccee------ecCh
Confidence            9998876 4666554    2499999999999899999999999999999997621          1111      1111


Q ss_pred             hhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          297 QTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       297 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ..+.. +.++.|++...  -+.++..+++++.+|++..  ++++.++|||++|||+++.+++. -|.||.+
T Consensus       298 ~~lv~-gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~-IR~Vi~~  366 (366)
T COG1062         298 FQLVT-GRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKS-IRSVIRF  366 (366)
T ss_pred             HHeec-cceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCce-eeEEecC
Confidence            12333 37888887742  3679999999999999985  69999999999999999999987 4666653

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=2.6e-46  Score=350.13  Aligned_cols=311  Identities=24%  Similarity=0.294  Sum_probs=261.9

Q ss_pred             eeeEEecccCC------CceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEe
Q 017901           29 CRAVVLPRFGG------PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (364)
Q Consensus        29 ~~a~~~~~~g~------~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (364)
                      |||+++.++|+      ++.++++ +.|.|.|+++||+||+.++|||++|++.+.|..+    ..+|+++|||++|+|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~   75 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVE   75 (371)
T ss_pred             CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEE
Confidence            79999999876      4789999 9999999999999999999999999999988642    25689999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCC
Q 017901          103 VGASVRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSED  138 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~  138 (364)
                      +|+++++|++||||+......                                            ...|+|++|+.++.+
T Consensus        76 vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~  155 (371)
T cd08281          76 VGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRR  155 (371)
T ss_pred             eCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEeccc
Confidence            999999999999998742100                                            012799999999999


Q ss_pred             ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHH
Q 017901          139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLA  216 (364)
Q Consensus       139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~  216 (364)
                      .++++|+++++++++.++++++|||+++.+.+.+++|++|+|.| +|++|++++|+|+..|+ +|+++.+++++ +.+++
T Consensus       156 ~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~  234 (371)
T cd08281         156 SVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE  234 (371)
T ss_pred             ceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence            99999999999999999999999999987788999999999998 69999999999999999 68888766554 88899


Q ss_pred             cCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHH
Q 017901          217 AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (364)
Q Consensus       217 ~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (364)
                      +|+++++++.+.++.+.++    +++|++|||+|+...+..++++++++|+++.+|....            ..    ..
T Consensus       235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~----~~  298 (371)
T cd08281         235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDP------------EA----RL  298 (371)
T ss_pred             cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCC------------Cc----ee
Confidence            9999999987776665554    2399999999987689999999999999999986411            00    01


Q ss_pred             HHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          293 KKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      .++...+..+++++.+++...  ..++++++++++.+|++++  ++++.|+|+|+++||+.+.+++..+|+|+
T Consensus       299 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         299 SVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             eecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            112224677889998887532  2568899999999999975  58999999999999999999998877663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=2.3e-45  Score=342.29  Aligned_cols=310  Identities=23%  Similarity=0.306  Sum_probs=258.0

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      |||++++.+++++  ++++ +.|.|.|+++||+||+.++|+|++|++.+.|..+    ..+|+++|||++|+|+++|+++
T Consensus         1 ~mka~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v   73 (358)
T TIGR03451         1 TVRGVIARSKGAP--VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGV   73 (358)
T ss_pred             CcEEEEEccCCCC--CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCC
Confidence            6999999998876  7888 9999999999999999999999999999988542    2578999999999999999999


Q ss_pred             CCCCCCCEEEEecCC------------------------------C------CCCCcceeEEeecCCccccCCCCCChhh
Q 017901          108 RSLTVGQEVFGALHP------------------------------T------AVRGTYADYAVLSEDELTPKPVSVTHAD  151 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~------------------------------~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~  151 (364)
                      ++|++||+|+.....                              +      ..+|+|+||+.++.+.++++|+++++++
T Consensus        74 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~  153 (358)
T TIGR03451        74 TDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAA  153 (358)
T ss_pred             cccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhH
Confidence            999999999863210                              0      1258999999999999999999999999


Q ss_pred             hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChh
Q 017901          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKD  229 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~  229 (364)
                      ++.+++.+.++|+++.+.+.+++|++|+|+| +|++|++++|+|+..|++ |+++.+++++ +.++++|+++++++.+.+
T Consensus       154 aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~  232 (358)
T TIGR03451       154 AGLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD  232 (358)
T ss_pred             hhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence            9999999999999887778899999999998 699999999999999995 8888766554 888999999999987766


Q ss_pred             HHHHhc----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccce
Q 017901          230 IELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI  304 (364)
Q Consensus       230 ~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (364)
                      +.+.+.    + ++|++|||+|++..+..++++++++|+++.+|....            ..    ...++...++.+++
T Consensus       233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~------------~~----~~~~~~~~~~~~~~  296 (358)
T TIGR03451       233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP------------DM----TLELPLLDVFGRGG  296 (358)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC------------Cc----eeeccHHHHhhcCC
Confidence            655443    1 399999999986689999999999999999996511            00    01111224556788


Q ss_pred             eEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          305 DYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       305 ~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ++.+++..  ...++++.+++++++|++++  .++++|+|+|+++||+.+.+++.. |+++.
T Consensus       297 ~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       297 ALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             EEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            88877642  13577899999999999975  589999999999999999888774 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=3.3e-45  Score=339.10  Aligned_cols=306  Identities=26%  Similarity=0.327  Sum_probs=255.7

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++..   ++.++++ +.|.|.|.++||+||+.++++|++|++.+.+....  +...|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~---~~~l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~   74 (339)
T cd08239           1 MRGAVFPG---DRTVELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVT   74 (339)
T ss_pred             CeEEEEec---CCceEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCc
Confidence            78999984   4568999 99999999999999999999999999998775321  123578999999999999999999


Q ss_pred             CCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      .|++||+|+.....                        ...+|+|++|+.++.+.++++|+++++++++.+++++.|||+
T Consensus        75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  154 (339)
T cd08239          75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH  154 (339)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence            99999999876421                        123699999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-C
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-K  237 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~  237 (364)
                      ++ ....+++|++|+|+| +|.+|++++|+|+.+|++ |+++.+++++ +.++++|+++++++++.+ .+.+.    + +
T Consensus       155 ~l-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~  231 (339)
T cd08239         155 AL-RRVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELTSGAG  231 (339)
T ss_pred             HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHhCCCC
Confidence            98 567899999999998 699999999999999998 9988766554 788999999999887654 33332    2 3


Q ss_pred             ccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG  317 (364)
Q Consensus       238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (364)
                      +|++|||+|+...+..++++++++|+++.+|....           ...   ..    ...++.+++++.+++.. +.++
T Consensus       232 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~---~~----~~~~~~~~~~i~g~~~~-~~~~  292 (339)
T cd08239         232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-----------LTI---EV----SNDLIRKQRTLIGSWYF-SVPD  292 (339)
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-----------ccc---Cc----HHHHHhCCCEEEEEecC-CHHH
Confidence            99999999998667889999999999999986411           010   00    01356688899888764 4678


Q ss_pred             HHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          318 LEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       318 ~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++++++.+|++++  .++++|+|+|+++||+.+.+++ .||+|+++
T Consensus       293 ~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         293 MEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            999999999999875  6899999999999999998876 59999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=4.6e-45  Score=339.82  Aligned_cols=311  Identities=18%  Similarity=0.190  Sum_probs=250.6

Q ss_pred             ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      |+.+.++.+.+  ....+++. +++.|.|+++||+|||.++|||++|++.+.|..+   ...+|.++|||++|+|+++|+
T Consensus        10 ~~~~~~~~~~~--~~~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~vG~   83 (360)
T PLN02586         10 PQKAFGWAARD--PSGVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGIVTKLGK   83 (360)
T ss_pred             hhheeEEEecC--CCCCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEEEEEECC
Confidence            34455555554  44458888 8999999999999999999999999999988543   125689999999999999999


Q ss_pred             CCCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhcc
Q 017901          106 SVRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASA  154 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~  154 (364)
                      ++++|++||+|+....                               ....+|+|+||++++.+.++++|+++++++++.
T Consensus        84 ~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~  163 (360)
T PLN02586         84 NVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAP  163 (360)
T ss_pred             CCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhh
Confidence            9999999999974211                               001269999999999999999999999999999


Q ss_pred             ccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-HHHHHcCCceeeeCCChhHHH
Q 017901          155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       155 ~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      +++.+.|+|+++.....+++|++|+|.| +|++|++++|+|+.+|++|+++..+++ + +.++++|+++++++.+.+...
T Consensus       164 l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~  242 (360)
T PLN02586        164 LLCAGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMK  242 (360)
T ss_pred             hhcchHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHH
Confidence            9999999999986666778999999988 699999999999999999988865544 3 566899999998876542222


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR  312 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (364)
                      ...+.+|++||++|+...+..++++++++|+++.+|....            +.      .++...++.++..+.+++..
T Consensus       243 ~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------------~~------~~~~~~~~~~~~~i~g~~~~  304 (360)
T PLN02586        243 AAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------------PL------ELPIFPLVLGRKLVGGSDIG  304 (360)
T ss_pred             hhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------------CC------ccCHHHHHhCCeEEEEcCcC
Confidence            2223399999999987688999999999999999986410            11      01111345566777776644


Q ss_pred             cCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          313 ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       313 ~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                       +..+++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus       305 -~~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        305 -GIKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             -CHHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence             467899999999999998766 5899999999999999999889999875

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-45  Score=338.23  Aligned_cols=305  Identities=20%  Similarity=0.246  Sum_probs=247.5

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhc-cCCccccCCCCCcccccceeEEEEeecCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS-GYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      .++++++.   +++.++++ +.+.| ++++||+|||.++|||++|++.+. |..+ .....+|+++|||++|+|+++  +
T Consensus         4 ~~~~~~~~---~~~~~~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~-~~~~~~p~v~GhE~~G~V~~v--~   75 (343)
T PRK09880          4 KTQSCVVA---GKKDVAVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVG-NFVIKAPMVLGHEVIGKIVHS--D   75 (343)
T ss_pred             cceEEEEe---cCCceEEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcc-cccccCCcccCcccEEEEEEe--c
Confidence            47889998   55568998 99887 689999999999999999999875 4321 112357999999999999999  7


Q ss_pred             CCCCCCCCEEEEecCC----------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccch
Q 017901          107 VRSLTVGQEVFGALHP----------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA  158 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~----------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  158 (364)
                      +++|++||||+.....                            ...+|+|+||++++.+.++++|+++++++++ +..+
T Consensus        76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~  154 (343)
T PRK09880         76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEP  154 (343)
T ss_pred             CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcH
Confidence            8899999999864210                            0136999999999999999999999987655 4556


Q ss_pred             HHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhc-
Q 017901          159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-  235 (364)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~-  235 (364)
                      +.+||+++. .....+|++|+|.| +|++|++++|+|+.+|+ +|+++.++++ ++.++++|+++++++++.++.+... 
T Consensus       155 ~~~a~~al~-~~~~~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~  232 (343)
T PRK09880        155 LAVAIHAAH-QAGDLQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAE  232 (343)
T ss_pred             HHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhcc
Confidence            779999984 55667899999999 69999999999999999 6888876555 4889999999999987766544333 


Q ss_pred             -CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC
Q 017901          236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD  314 (364)
Q Consensus       236 -g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (364)
                       |++|++|||+|++..+..++++++++|+++.+|....            ..      +++...+..+++++.+++..  
T Consensus       233 ~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~k~~~i~g~~~~--  292 (343)
T PRK09880        233 KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------------PP------EFPMMTLIVKEISLKGSFRF--  292 (343)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------------CC------ccCHHHHHhCCcEEEEEeec--
Confidence             3499999999987688999999999999999986410            11      11122456778888887743  


Q ss_pred             HHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          315 AEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       315 ~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .++++++++++++|++++  .++++|+|+|+++||+.+.+++..||+++.+
T Consensus       293 ~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        293 TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            467899999999999986  5889999999999999999888789999975

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.3e-44  Score=335.09  Aligned_cols=309  Identities=18%  Similarity=0.201  Sum_probs=250.8

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      .+|+.+...+.+..+... +++.|.|+++||+|||.++|||++|++.+.|.++.   ..+|.++|||++|+|+++|++++
T Consensus         5 ~~a~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~---~~~p~i~GhE~aG~Vv~vG~~v~   80 (375)
T PLN02178          5 NKAFGWAANDESGVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF---SRYPIIPGHEIVGIATKVGKNVT   80 (375)
T ss_pred             ceeEEEEEccCCCCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC---CCCCcccCceeeEEEEEECCCCC
Confidence            345555545555568888 88889999999999999999999999999885421   24688999999999999999999


Q ss_pred             CCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccc
Q 017901          109 SLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF  157 (364)
Q Consensus       109 ~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  157 (364)
                      +|++||||.....                               ....+|+|+||++++.+.++++|+++++++++.+++
T Consensus        81 ~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~  160 (375)
T PLN02178         81 KFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLC  160 (375)
T ss_pred             ccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhc
Confidence            9999999974211                               001269999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-c-HHHHHHcCCceeeeCCChh-HHHH
Q 017901          158 AALTAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDRVLAAGAEQAVDYSSKD-IELA  233 (364)
Q Consensus       158 ~~~ta~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~-~~~~~~~g~~~v~~~~~~~-~~~~  233 (364)
                      .+.|+|+++..... .++|++|+|.| +|++|++++|+|+.+|++|+++.+++ + .+.++++|+++++++.+.+ +.+.
T Consensus       161 ~~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~  239 (375)
T PLN02178        161 AGITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA  239 (375)
T ss_pred             cchHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHh
Confidence            99999999854433 36899999998 69999999999999999999987654 3 3677899999998876532 2222


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                      ..+ +|++|||+|++..+..++++++++|+++.+|....            +.      .++...+..+++++.+++.. 
T Consensus       240 ~~~-~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------------~~------~~~~~~~~~~~~~i~g~~~~-  299 (375)
T PLN02178        240 VGT-MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------------PL------DLPIFPLVLGRKMVGGSQIG-  299 (375)
T ss_pred             hCC-CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------------CC------ccCHHHHHhCCeEEEEeCcc-
Confidence            224 99999999987678999999999999999986410            11      11112455678888888754 


Q ss_pred             CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ..+++.++++++.+|++++.+ +.|+|+|+++||+.+.+++..||+|+++
T Consensus       300 ~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        300 GMKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             CHHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            467899999999999998876 5799999999999999999889999875

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1.7e-44  Score=304.93  Aligned_cols=318  Identities=24%  Similarity=0.355  Sum_probs=269.4

Q ss_pred             ecccccceeeEEecccCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEE
Q 017901           22 RFLVTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV  100 (364)
Q Consensus        22 ~~~~~~~~~a~~~~~~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V  100 (364)
                      .+.++...|+++|.+.|+| +.+++. +.++|+...++|+|+.+|++|||+|+..++|.+|.  ++.+|.+-|+|++|+|
T Consensus        13 a~q~~~~~kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpv--rP~~PAVgGnEGv~eV   89 (354)
T KOG0025|consen   13 ASQMPARSKALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPV--RPELPAVGGNEGVGEV   89 (354)
T ss_pred             ccccccccceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccCC--CCCCCcccCCcceEEE
Confidence            3447788899999999998 789999 99999988888999999999999999999998754  4467899999999999


Q ss_pred             EeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEE
Q 017901          101 AAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV  180 (364)
Q Consensus       101 ~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli  180 (364)
                      +.+|+++.+|++||+|+....   ..|.|++|.+.+++.++++++.++++.||++..+.+|||++|.+...+.+||+|+.
T Consensus        90 v~vGs~vkgfk~Gd~VIp~~a---~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQ  166 (354)
T KOG0025|consen   90 VAVGSNVKGFKPGDWVIPLSA---NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQ  166 (354)
T ss_pred             EEecCCcCccCCCCeEeecCC---CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeee
Confidence            999999999999999999887   45999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCchHHHHHHHHHHHcCCeEEEeeCCcc----H-HHHHHcCCceeeeCCC---hhHHHHhc--CCccEEEECCCCchh
Q 017901          181 LGGGGAVGFAAVQFSVASGCHVSATCGSKS----I-DRVLAAGAEQAVDYSS---KDIELAIK--GKFDAVLDTIGAPET  250 (364)
Q Consensus       181 ~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~----~-~~~~~~g~~~v~~~~~---~~~~~~i~--g~~D~vid~~g~~~~  250 (364)
                      +||++.+|++.+|+|+++|.+-+.++|+..    . +.++++||++|+..+.   .+......  .++.+.|+|+|+. +
T Consensus       167 NganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGk-s  245 (354)
T KOG0025|consen  167 NGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGK-S  245 (354)
T ss_pred             cCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCch-h
Confidence            999999999999999999999999887643    2 5578899999985322   12222211  2489999999998 8


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc------C----HHHHHH
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA------D----AEGLEE  320 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~  320 (364)
                      .....+.|.+||+++++|+.           +..|.      ..+...++++++.+.|+++..      +    .+.+.+
T Consensus       246 a~~iar~L~~GgtmvTYGGM-----------SkqPv------~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~  308 (354)
T KOG0025|consen  246 ATEIARYLERGGTMVTYGGM-----------SKQPV------TVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDE  308 (354)
T ss_pred             HHHHHHHHhcCceEEEecCc-----------cCCCc------ccccchheeccceeeeeeeeehhhccCCcHHHHHHHHH
Confidence            88999999999999999987           22332      223336899999999999821      1    246788


Q ss_pred             HHHHHHcCCceeccceeeccccHHHHHHHHhcC-CCCCeEEEEc
Q 017901          321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKR-LIPGKVVLEF  363 (364)
Q Consensus       321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~-~~~gkvvi~~  363 (364)
                      +.++++.|+|........+|++.+.|++...+. ...||-+|.+
T Consensus       309 ~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  309 LCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             HHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            899999999999888899999999999864443 3446777765

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=8.3e-44  Score=334.15  Aligned_cols=314  Identities=19%  Similarity=0.247  Sum_probs=255.8

Q ss_pred             ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      +.+||++++..++.+  +.++ +.+.|.|+++||+||+.++|||++|++.+.|..+.  ...+|+++|||++|+|+++|+
T Consensus         8 ~~~mka~~~~~~~~~--~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG~   82 (381)
T PLN02740          8 VITCKAAVAWGPGEP--LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVGE   82 (381)
T ss_pred             ceeeEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeCC
Confidence            457999999976644  7788 99999999999999999999999999999886421  225789999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCC-----------------------------------------------CCCCcceeEEeecCC
Q 017901          106 SVRSLTVGQEVFGALHPT-----------------------------------------------AVRGTYADYAVLSED  138 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~~~~-----------------------------------------------~~~g~~~~~~~~~~~  138 (364)
                      +++.|++||||+......                                               ..+|+|+||++++.+
T Consensus        83 ~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~  162 (381)
T PLN02740         83 GVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSA  162 (381)
T ss_pred             CCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehH
Confidence            999999999998753110                                               015899999999999


Q ss_pred             ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHH
Q 017901          139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA  216 (364)
Q Consensus       139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~  216 (364)
                      .++++|+++++++++.+++++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.++++ .+.+++
T Consensus       163 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~  241 (381)
T PLN02740        163 CVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE  241 (381)
T ss_pred             HeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence            99999999999999999999999999887778999999999999 69999999999999999 6988876655 488899


Q ss_pred             cCCceeeeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhH
Q 017901          217 AGAEQAVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATT  289 (364)
Q Consensus       217 ~g~~~v~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (364)
                      +|+++++++.+.  ++.+.+.    +.+|++|||+|++..+..++.+++++ |+++.+|....            +.   
T Consensus       242 ~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~------------~~---  306 (381)
T PLN02740        242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT------------PK---  306 (381)
T ss_pred             cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCC------------Cc---
Confidence            999999987653  3444433    23999999999876899999999997 99999986511            10   


Q ss_pred             HHHHHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          290 VLLKKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                       .+.+.... +.+++++.+++...  ...++.++++++.++.+++  .++++|+|+|+++||+.+.+++. .|++|+.
T Consensus       307 -~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        307 -MLPLHPME-LFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             -eecccHHH-HhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence             00111111 23577888776532  2467899999999998865  58999999999999999988876 5999863

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2e-43  Score=328.72  Aligned_cols=311  Identities=19%  Similarity=0.216  Sum_probs=255.6

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      +.+++++++.+++.  +.++ +++.|.|+++||+||+.+++||++|++.+.|..+.   ..+|.++|||++|+|+++|++
T Consensus         8 ~~~~~~~~~~~~~~--~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~   81 (357)
T PLN02514          8 KKTTGWAARDPSGH--LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSD   81 (357)
T ss_pred             ceEEEEEEecCCCC--ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCC
Confidence            34889999988765  8888 99999999999999999999999999999885421   246889999999999999999


Q ss_pred             CCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccc
Q 017901          107 VRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAI  155 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  155 (364)
                      +++|++||+|+....                               ....+|+|++|++++.+.++++|+++++.+++.+
T Consensus        82 v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  161 (357)
T PLN02514         82 VSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL  161 (357)
T ss_pred             cccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence            999999999974210                               0013599999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHH
Q 017901          156 PFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       156 ~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ++++.|||+++......++|++++|+| +|++|++++|+|+.+|++++++++++++  ..++++|+++++++.+.+....
T Consensus       162 ~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~  240 (357)
T PLN02514        162 LCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE  240 (357)
T ss_pred             hhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence            999999999986666668999999997 7999999999999999999888766543  3456799988776654322222


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                      ..+.+|++|||+|....+..++++++++|+++.+|....            +.      .+....++.+++++.+++.. 
T Consensus       241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~i~g~~~~-  301 (357)
T PLN02514        241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------------PL------QFVTPMLMLGRKVITGSFIG-  301 (357)
T ss_pred             hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------------CC------cccHHHHhhCCcEEEEEecC-
Confidence            222399999999976688999999999999999997511            11      11112456778899888764 


Q ss_pred             CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ...+++++++++.+|++.+.+ +.|+|+|+++||+.+.+++..||+|++++
T Consensus       302 ~~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        302 SMKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             CHHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence            567899999999999998766 58999999999999999998899999864

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.5e-43  Score=329.43  Aligned_cols=310  Identities=24%  Similarity=0.305  Sum_probs=250.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++..++..  ++++ +.|.|.|+++||+||+.++|||++|++.+.|..+.   ..+|.++|||++|+|+++|++++
T Consensus         2 ~~a~~~~~~~~~--l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~   75 (368)
T TIGR02818         2 SRAAVAWAAGQP--LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVT   75 (368)
T ss_pred             ceEEEEecCCCC--eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCc
Confidence            789998876654  8888 99999999999999999999999999999886432   25789999999999999999999


Q ss_pred             CCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCccccCC
Q 017901          109 SLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTPKP  144 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~ip  144 (364)
                      +|++||||.......                                            ...|+|+||+++|.+.++++|
T Consensus        76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP  155 (368)
T TIGR02818        76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN  155 (368)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence            999999998753100                                            013799999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCcee
Q 017901          145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQA  222 (364)
Q Consensus       145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v  222 (364)
                      +++++++++.+++++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ +.++++|++++
T Consensus       156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~  234 (368)
T TIGR02818       156 PAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDC  234 (368)
T ss_pred             CCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeE
Confidence            99999999999999999999987788999999999998 69999999999999999 79998766554 88899999999


Q ss_pred             eeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901          223 VDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (364)
Q Consensus       223 ~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (364)
                      +++++  .++.+.+.    +.+|++|||+|++..+..++++++++ |+++.+|....          +....      +.
T Consensus       235 i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~----------~~~~~------~~  298 (368)
T TIGR02818       235 VNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGA----------GQEIS------TR  298 (368)
T ss_pred             EcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCC----------CCccc------cc
Confidence            98763  23333332    23999999999876889999999986 99999986411          00110      00


Q ss_pred             hhhhhccceeEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          296 MQTWYSYGIDYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       296 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ...+.. +..+.+....  ....++.++++++.++++++  +++++|+|+|+++||+.+.+++. .|+++++
T Consensus       299 ~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       299 PFQLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             HHHHhc-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            001222 2345554432  13567899999999999864  58999999999999999988765 7999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.7e-43  Score=329.91  Aligned_cols=309  Identities=18%  Similarity=0.256  Sum_probs=254.5

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      .||++++.+++  +.++++ +.|.|.|+++||+|||.++|||++|++.+.+..      .+|+++|||++|+|+++|+++
T Consensus        12 ~mka~~~~~~~--~~~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~------~~p~i~GhE~~G~V~~vG~~v   82 (378)
T PLN02827         12 TCRAAVAWGAG--EALVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA------LFPRIFGHEASGIVESIGEGV   82 (378)
T ss_pred             eeEEEEEecCC--CCceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCCC------CCCeeecccceEEEEEcCCCC
Confidence            59999998654  348888 999999999999999999999999999987741      358899999999999999999


Q ss_pred             CCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCccccC
Q 017901          108 RSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTPK  143 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~i  143 (364)
                      ++|++||+|+......                                            ...|+|++|+.++.+.++++
T Consensus        83 ~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~i  162 (378)
T PLN02827         83 TEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  162 (378)
T ss_pred             cccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEEC
Confidence            9999999999864210                                            01389999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCcc-HHHHHHcCCce
Q 017901          144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKS-IDRVLAAGAEQ  221 (364)
Q Consensus       144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~-~~~~~~~g~~~  221 (364)
                      |+++++++++.+.+++.++|+++.+.+++++|++|+|+| +|++|++++|+|+.+|++ |+++.++++ .+.++++|+++
T Consensus       163 P~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~  241 (378)
T PLN02827        163 DPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTD  241 (378)
T ss_pred             CCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence            999999999998888889998876778899999999998 699999999999999995 777765544 48889999999


Q ss_pred             eeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901          222 AVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (364)
Q Consensus       222 v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (364)
                      ++++++  .++.+.+.    +.+|++|||+|....+..++++++++ |+++.+|....           .+.     +..
T Consensus       242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-----------~~~-----~~~  305 (378)
T PLN02827        242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-----------KPE-----VSA  305 (378)
T ss_pred             EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-----------Ccc-----ccc
Confidence            998765  24444332    23999999999876789999999998 99999986511           010     000


Q ss_pred             hhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          295 RMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                       ...++.+++++.|++...  ...++.++++++.+|++++  .++++|+|+|+++||+.+.+++. +|+||++.
T Consensus       306 -~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        306 -HYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             -cHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence             013456788888877532  2457889999999999998  68999999999999999998887 69999863

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.3e-43  Score=326.25  Aligned_cols=302  Identities=23%  Similarity=0.238  Sum_probs=250.6

Q ss_pred             eEEecccCCC--ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           31 AVVLPRFGGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        31 a~~~~~~g~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |+.+.++|++  ..++++ +.|.|.|+++||+||+.++|||++|++.+.|.++.   ...|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~   76 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAG   76 (329)
T ss_pred             CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCc
Confidence            3566777765  569999 99999999999999999999999999999986432   13478999999999999999999


Q ss_pred             CCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      +|++||+|+.....                        ...+|+|++|+.++.+.++++|+++++++++.+++.+.|||+
T Consensus        77 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~  156 (329)
T TIGR02822        77 GFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYR  156 (329)
T ss_pred             ccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHH
Confidence            99999999753110                        013699999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEE
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLD  243 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid  243 (364)
                      ++ ..+++++|++|+|+| +|++|++++|+|+.+|++|+++.+++++ +.++++|+++++++.+..    -.+ +|++++
T Consensus       157 ~~-~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~-~d~~i~  229 (329)
T TIGR02822       157 AL-LRASLPPGGRLGLYG-FGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP----PEP-LDAAIL  229 (329)
T ss_pred             HH-HhcCCCCCCEEEEEc-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC----ccc-ceEEEE
Confidence            98 468899999999999 5999999999999999999998776554 889999999998854321    114 899999


Q ss_pred             CCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHH
Q 017901          244 TIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR  323 (364)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (364)
                      +.+....+..++++++++|+++.+|....          ..+.       +....+..+++++.+.+.. .++++.++++
T Consensus       230 ~~~~~~~~~~~~~~l~~~G~~v~~G~~~~----------~~~~-------~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~  291 (329)
T TIGR02822       230 FAPAGGLVPPALEALDRGGVLAVAGIHLT----------DTPP-------LNYQRHLFYERQIRSVTSN-TRADAREFLE  291 (329)
T ss_pred             CCCcHHHHHHHHHhhCCCcEEEEEeccCc----------cCCC-------CCHHHHhhCCcEEEEeecC-CHHHHHHHHH
Confidence            98877789999999999999999986411          0000       1112345677888887643 5678889999


Q ss_pred             HHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       324 ~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ++.+|++++ ++++|+|+|+++||+.+.+++..||+|+.
T Consensus       292 l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~  329 (329)
T TIGR02822       292 LAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVLV  329 (329)
T ss_pred             HHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence            999999975 57899999999999999999999999873

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-43  Score=303.09  Aligned_cols=314  Identities=22%  Similarity=0.293  Sum_probs=264.2

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      .+.++||++.++++.|  |.++ ++..++|+.+||+||++++++|+||.+.+.|..   ....+|.++|||++|+|+.+|
T Consensus         4 kvI~CKAAV~w~a~~P--L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvG   77 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKP--LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVG   77 (375)
T ss_pred             CceEEeEeeeccCCCC--eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEec
Confidence            3568999999999988  9999 999999999999999999999999999999963   345789999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCC-------------------------------------------CC--CCCcceeEEeecCCc
Q 017901          105 ASVRSLTVGQEVFGALHP-------------------------------------------TA--VRGTYADYAVLSEDE  139 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~-------------------------------------------~~--~~g~~~~~~~~~~~~  139 (364)
                      .+|+.+++||+|+.....                                           ++  .-.+|+||.+++...
T Consensus        78 egV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~  157 (375)
T KOG0022|consen   78 EGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDIS  157 (375)
T ss_pred             CCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecce
Confidence            999999999999865421                                           01  224799999999999


Q ss_pred             cccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHc
Q 017901          140 LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAA  217 (364)
Q Consensus       140 ~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~  217 (364)
                      +++|++..+++.++++.|...|+|.|..+.+.+++|+++.|.| .|.+|+++++-||+.|| ++|++.-++++ +.++++
T Consensus       158 v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~f  236 (375)
T KOG0022|consen  158 VAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEF  236 (375)
T ss_pred             eEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhc
Confidence            9999999999999999999999999998999999999999999 99999999999999999 89999766665 899999


Q ss_pred             CCceeeeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHH
Q 017901          218 GAEQAVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTV  290 (364)
Q Consensus       218 g~~~v~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (364)
                      |+++.+|..+.  .+.+.+.    |.+|+-|||+|+..++.+++.+...| |+-|.+|....          +...    
T Consensus       237 GaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----------~~~i----  302 (375)
T KOG0022|consen  237 GATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----------GQEI----  302 (375)
T ss_pred             CcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----------Cccc----
Confidence            99999998732  2334333    34999999999998999999999999 99999997511          1111    


Q ss_pred             HHHHhhhhhhccceeEEEEEe--ccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          291 LLKKRMQTWYSYGIDYSYIYM--RADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                        +... .....+..+.|...  ...++++..+.+.+.++++..  .+++.+||+++++||+.|.+++.. |.|+.+
T Consensus       303 --~~~p-~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  303 --STRP-FQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             --ccch-hhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence              1111 12233555555544  235889999999999998875  599999999999999999999985 777754

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=4.2e-43  Score=322.95  Aligned_cols=307  Identities=25%  Similarity=0.290  Sum_probs=253.6

Q ss_pred             eeeEEecccCCC---ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           29 CRAVVLPRFGGP---EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        29 ~~a~~~~~~g~~---~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      ||++++.+++++   +.+++. +.|.|.|+++||+||+.++|+|++|++.+.|..+.  ...+|.++|||++|+|+++|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~   77 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGG   77 (324)
T ss_pred             CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECC
Confidence            789999988876   678999 99999999999999999999999999999886532  225688999999999999999


Q ss_pred             CCCC-CCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEE-cC
Q 017901          106 SVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL-GG  183 (364)
Q Consensus       106 ~~~~-~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~-g~  183 (364)
                      ++++ |++||+|++...   .+|+|++|+.++.+.++++|+++++.+++.+++.+.|||.++ ..... +++.++|+ ++
T Consensus        78 ~v~~~~~vGd~V~~~~~---~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g  152 (324)
T cd08291          78 GPLAQSLIGKRVAFLAG---SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAA  152 (324)
T ss_pred             CccccCCCCCEEEecCC---CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccC
Confidence            9996 999999998653   148999999999999999999999999998888889998654 55555 45556565 77


Q ss_pred             CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhh
Q 017901          184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNF  257 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~  257 (364)
                      +|.+|++++|+|+.+|++|+++++++++ +.++++|++++++++..++.+.++     .++|++|||+|+. .....+++
T Consensus       153 ~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~  231 (324)
T cd08291         153 ASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLA  231 (324)
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHh
Confidence            9999999999999999999999776655 788999999999988776665553     1399999999997 77888999


Q ss_pred             ccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----CHHHHHHHHHHHHcCCcee
Q 017901          258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----DAEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       258 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~i~~  332 (364)
                      ++++|+++.+|....           ....     .++......+++++.+++...     ..+.+++++++++ +.+++
T Consensus       232 l~~~G~~v~~g~~~~-----------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  294 (324)
T cd08291         232 MPYGSTLYVYGYLSG-----------KLDE-----PIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKT  294 (324)
T ss_pred             hCCCCEEEEEEecCC-----------CCcc-----cCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccccc
Confidence            999999999986411           0100     011113456788888876531     2457888899988 89999


Q ss_pred             ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          333 PVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       333 ~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      .++++|+|+|+++||+.+.+++..||+++
T Consensus       295 ~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~  323 (324)
T cd08291         295 TFASRYPLALTLEAIAFYSKNMSTGKKLL  323 (324)
T ss_pred             ceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence            99999999999999999999998999987

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=9.9e-43  Score=325.95  Aligned_cols=309  Identities=19%  Similarity=0.260  Sum_probs=254.2

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +|||+++.+++.+  ++++ +.+.|+|+++||+||+.++|||++|++.+.|..+   ...+|.++|||++|+|+++|+++
T Consensus         2 ~~ka~~~~~~~~~--~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v   75 (369)
T cd08301           2 TCKAAVAWEAGKP--LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGV   75 (369)
T ss_pred             ccEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCC
Confidence            7899999977655  8888 9999999999999999999999999999988643   23578999999999999999999


Q ss_pred             CCCCCCCEEEEecCCC---------------------------------------------CCCCcceeEEeecCCcccc
Q 017901          108 RSLTVGQEVFGALHPT---------------------------------------------AVRGTYADYAVLSEDELTP  142 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~---------------------------------------------~~~g~~~~~~~~~~~~~~~  142 (364)
                      ++|++||||+......                                             ...|+|+||+.++.+.+++
T Consensus        76 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  155 (369)
T cd08301          76 TDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAK  155 (369)
T ss_pred             CccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEE
Confidence            9999999999753100                                             0237899999999999999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCc
Q 017901          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAE  220 (364)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~  220 (364)
                      +|+++++++++.+++++.|||+++.+..++++|++|+|+| +|.+|++++|+|+.+|+ +|+++.+++++ +.++++|++
T Consensus       156 iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~  234 (369)
T cd08301         156 INPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVT  234 (369)
T ss_pred             CCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence            9999999999999999999999887778999999999998 69999999999999999 79999776655 888999999


Q ss_pred             eeeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHH
Q 017901          221 QAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (364)
Q Consensus       221 ~v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (364)
                      .++++..  .++.+.++    +.+|++|||+|+...+..++++++++ |+++.+|....            +.    .++
T Consensus       235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~------------~~----~~~  298 (369)
T cd08301         235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHK------------DA----VFS  298 (369)
T ss_pred             eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCC------------Cc----ccc
Confidence            8888764  23443332    33999999999876789999999996 99999997511            00    011


Q ss_pred             HhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          294 KRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      +....+ .+++++.+++...  .+.+++++++++.++.+++  .++++|+|+|+++||+.+.+++. .|+++
T Consensus       299 ~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~  368 (369)
T cd08301         299 THPMNL-LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCIL  368 (369)
T ss_pred             cCHHHH-hcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEe
Confidence            111112 3578888876532  2457899999999998865  48899999999999999999887 58886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=7.8e-43  Score=318.32  Aligned_cols=298  Identities=19%  Similarity=0.217  Sum_probs=231.9

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecC-hhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSIN-PLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      +||++++.   +++.++++ +.+.|+|+++||+||+.++||| ++|++.+.|..+......+|+++|||++|+|+++|++
T Consensus         1 ~~ka~~~~---~~~~l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~   76 (308)
T TIGR01202         1 KTQAIVLS---GPNQIELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD   76 (308)
T ss_pred             CceEEEEe---CCCeEEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence            47899998   45568999 9999999999999999999996 7999999887543221357999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCC-----CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEE
Q 017901          107 VRSLTVGQEVFGALHPT-----AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~~-----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~  181 (364)
                      + .|++||||+......     ...|+|+||++++.+.++++|++++++. +.+. .+.|||+++.+ . ..++++++|+
T Consensus        77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~  151 (308)
T TIGR01202        77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIV  151 (308)
T ss_pred             C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEE
Confidence            8 599999999743211     1259999999999999999999999864 4443 46899999844 3 3468899999


Q ss_pred             cCCchHHHHHHHHHHHcCCeEEEeeC-CccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHHhhcc
Q 017901          182 GGGGAVGFAAVQFSVASGCHVSATCG-SKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLK  259 (364)
Q Consensus       182 g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~  259 (364)
                      | +|++|++++|+|+.+|++++++++ .+++ +.+.   ...++|+.+.    .-.+ +|++|||+|++..+..++++++
T Consensus       152 G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~---~~~~i~~~~~----~~~g-~Dvvid~~G~~~~~~~~~~~l~  222 (308)
T TIGR01202       152 G-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT---GYEVLDPEKD----PRRD-YRAIYDASGDPSLIDTLVRRLA  222 (308)
T ss_pred             C-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh---hccccChhhc----cCCC-CCEEEECCCCHHHHHHHHHhhh
Confidence            8 799999999999999998665543 3222 3332   3345554321    1124 9999999999767899999999


Q ss_pred             CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--cccee
Q 017901          260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVDKT  337 (364)
Q Consensus       260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~  337 (364)
                      ++|+++.+|....            +.      .+++..++.+++++.++... ..++++++++++++|++++  .+++.
T Consensus       223 ~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~~g~i~~~~~it~~  283 (308)
T TIGR01202       223 KGGEIVLAGFYTE------------PV------NFDFVPAFMKEARLRIAAEW-QPGDLHAVRELIESGALSLDGLITHQ  283 (308)
T ss_pred             cCcEEEEEeecCC------------Cc------ccccchhhhcceEEEEeccc-chhHHHHHHHHHHcCCCChhhcccee
Confidence            9999999986511            11      11222355677888876643 4678999999999999986  58999


Q ss_pred             eccccHHHHHHHHhcCCCCCeEEEE
Q 017901          338 FHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       338 ~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      |+|+|+++||+.+.++...+|++++
T Consensus       284 ~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       284 RPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             ecHHHHHHHHHHHhcCcCceEEEeC
Confidence            9999999999988777667899874

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.1e-42  Score=324.04  Aligned_cols=312  Identities=21%  Similarity=0.220  Sum_probs=238.3

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||+++++.. +++ ++++ +.|.|+|+++||+||+.|+|||++|++.+.|..+......+|.++|||++|+|+++|++ +
T Consensus         1 mka~~~~~~-~~~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~   76 (355)
T cd08230           1 MKAIAVKPG-KPG-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S   76 (355)
T ss_pred             CceeEecCC-CCC-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence            688888843 333 8999 99999999999999999999999999999986433222346899999999999999999 9


Q ss_pred             CCCCCCEEEEecCCC--------------------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH
Q 017901          109 SLTVGQEVFGALHPT--------------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~--------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (364)
                      .|++||||+......                          ..+|+|+||++++.+.++++|++++  +++++..++.++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~  154 (355)
T cd08230          77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVV  154 (355)
T ss_pred             CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHH
Confidence            999999998753210                          1358999999999999999999999  344454555555


Q ss_pred             HHHHHH------hcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC----CccHHHHHHcCCceeeeCCChhHHH
Q 017901          163 WRALKC------AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG----SKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       163 ~~~l~~------~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~----~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ++++..      ....++|++|+|.| +|++|++++|+|+..|++|+++.+    +++++.++++|++. +++.+.++.+
T Consensus       155 ~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~  232 (355)
T cd08230         155 EKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAE  232 (355)
T ss_pred             HHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhh
Confidence            544322      22357899999998 699999999999999999999876    23347889999986 4555544332


Q ss_pred             -HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEe
Q 017901          233 -AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYM  311 (364)
Q Consensus       233 -~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                       ...+++|+||||+|++..+..++++++++|+++.+|....          ..+. .+..... ...++.+++++.+++.
T Consensus       233 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~----------~~~~-~~~~~~~-~~~~~~k~~~i~g~~~  300 (355)
T cd08230         233 VKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGG----------GREF-EVDGGEL-NRDLVLGNKALVGSVN  300 (355)
T ss_pred             hhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCC----------CCcc-ccChhhh-hhhHhhcCcEEEEecC
Confidence             1112399999999987688999999999999999997511          0010 0000000 1246778999999865


Q ss_pred             ccCHHHHHHHHHHHHcCC------ceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          312 RADAEGLEEIRRLSETGK------LKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       312 ~~~~~~~~~~~~~~~~g~------i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      . +.++++++++++.++.      +++.++++|+|+|+++||+.+.++.  +|+|++|
T Consensus       301 ~-~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         301 A-NKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             C-chhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            4 4677888999998776      5556899999999999999887554  5999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=3.2e-42  Score=322.22  Aligned_cols=310  Identities=23%  Similarity=0.318  Sum_probs=250.2

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +||++++.+++++  ++++ +.|.|.|+++||+||++++|||++|++.+.|..+.   ..+|+++|||++|+|+++|+++
T Consensus         2 ~~~a~~~~~~~~~--~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v   75 (368)
T cd08300           2 TCKAAVAWEAGKP--LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGV   75 (368)
T ss_pred             cceEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCC
Confidence            6899998876654  8888 99999999999999999999999999999886432   2578999999999999999999


Q ss_pred             CCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCccccC
Q 017901          108 RSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTPK  143 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~i  143 (364)
                      ++|++||+|+......                                            ...|+|+||+.++.+.++++
T Consensus        76 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  155 (368)
T cd08300          76 TSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKI  155 (368)
T ss_pred             ccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeC
Confidence            9999999998752100                                            01368999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCce
Q 017901          144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQ  221 (364)
Q Consensus       144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~  221 (364)
                      |+++++++++.+++++.|||+++.+.+.+++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ +.++++|+++
T Consensus       156 P~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~  234 (368)
T cd08300         156 NPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATD  234 (368)
T ss_pred             CCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCE
Confidence            999999999999999999999987778999999999998 69999999999999999 69988776655 7889999999


Q ss_pred             eeeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901          222 AVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (364)
Q Consensus       222 v~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (364)
                      ++++.+.  ++.+.+.    +++|+||||+|+...+..++++++++ |+++.+|....          +.... ....  
T Consensus       235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~----------~~~~~-~~~~--  301 (368)
T cd08300         235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAA----------GQEIS-TRPF--  301 (368)
T ss_pred             EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCC----------CCccc-cCHH--
Confidence            9987653  3444432    23999999999866899999999987 99999986411          00110 0010  


Q ss_pred             hhhhhhccceeEEEEEe--ccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          295 RMQTWYSYGIDYSYIYM--RADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       295 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                         .+. .+..+.++..  ....+++.++++++.++++++  .++++|+|+|+++||+.+.+++. .|++++
T Consensus       302 ---~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         302 ---QLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             ---HHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence               111 1234444433  224678899999999999985  58999999999999999988775 698875

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-42  Score=317.13  Aligned_cols=310  Identities=22%  Similarity=0.311  Sum_probs=246.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      ||++++.+++   .+++. +.|.|.| .++||+||+.++++|++|++.+....    ...+|.++|||++|+|+++|+++
T Consensus         1 Mka~~~~~~~---~~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v   72 (347)
T PRK10309          1 MKSVVNDTDG---IVRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG----AHYYPITLGHEFSGYVEAVGSGV   72 (347)
T ss_pred             CceEEEeCCC---ceEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC----CCCCCcccccceEEEEEEeCCCC
Confidence            7899998654   48888 9999987 59999999999999999997543211    01357899999999999999999


Q ss_pred             CCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          108 RSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      ++|++||+|+.....                       ...+|+|++|+.++.+.++++|+++++++++.+. +..++|+
T Consensus        73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~  151 (347)
T PRK10309         73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH  151 (347)
T ss_pred             CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence            999999999986311                       0136999999999999999999999999988773 3456788


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhH---HHHhc-CCc
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDI---ELAIK-GKF  238 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~---~~~i~-g~~  238 (364)
                      ++ +...+++|++|+|+| +|.+|++++|+|+.+|++ |+++.+++++ +.++++|++++++++..+.   .+... +++
T Consensus       152 ~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~  229 (347)
T PRK10309        152 AF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRF  229 (347)
T ss_pred             HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence            86 667889999999998 699999999999999997 6777665554 7789999999988765431   12222 238


Q ss_pred             c-EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----
Q 017901          239 D-AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----  313 (364)
Q Consensus       239 D-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  313 (364)
                      | ++|||+|+...+..++++++++|+++.+|....          .....   .  ..+..+..+++++.+++...    
T Consensus       230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----------~~~~~---~--~~~~~~~~~~~~i~g~~~~~~~~~  294 (347)
T PRK10309        230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHH----------DLHLT---S--ATFGKILRKELTVIGSWMNYSSPW  294 (347)
T ss_pred             CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC----------CcccC---h--hhhhHHhhcCcEEEEEeccccCCc
Confidence            8 999999987788999999999999999986511          00010   0  01113566788888876532    


Q ss_pred             CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          314 DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ..++++++++++++|.++  +.++++|+|+|+++||+.+.+++..||+|+++.
T Consensus       295 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  347 (347)
T PRK10309        295 PGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP  347 (347)
T ss_pred             chhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence            246789999999999985  568999999999999999999988899999863

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.1e-41  Score=319.67  Aligned_cols=320  Identities=18%  Similarity=0.190  Sum_probs=238.6

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCC-------CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEE
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLK-------PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV  100 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V  100 (364)
                      .|||+++..++   .++++ ++|.|+|+       +|||||||.++|||++|++.+.|..+    ..+|+++|||++|+|
T Consensus         2 ~mka~v~~~~~---~~~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~----~~~p~i~GhE~~G~V   73 (393)
T TIGR02819         2 GNRGVVYLGPG---KVEVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT----APTGLVLGHEITGEV   73 (393)
T ss_pred             CceEEEEecCC---ceeEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC----CCCCccccceeEEEE
Confidence            58999998544   48888 99999874       68999999999999999999988532    256899999999999


Q ss_pred             EeecCCCCCCCCCCEEEEecCC----------------------------C-----CCCCcceeEEeecCC--ccccCCC
Q 017901          101 AAVGASVRSLTVGQEVFGALHP----------------------------T-----AVRGTYADYAVLSED--ELTPKPV  145 (364)
Q Consensus       101 ~~vG~~~~~~~~Gd~V~~~~~~----------------------------~-----~~~g~~~~~~~~~~~--~~~~ip~  145 (364)
                      +++|+++++|++||||+.....                            +     ..+|+|+||++++..  +++++|+
T Consensus        74 ~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~  153 (393)
T TIGR02819        74 IEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPD  153 (393)
T ss_pred             EEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCC
Confidence            9999999999999999764210                            0     136999999999964  6999999


Q ss_pred             CCCh----hhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCc-cHHHHHHcCC
Q 017901          146 SVTH----ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSK-SIDRVLAAGA  219 (364)
Q Consensus       146 ~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~-~~~~~~~~g~  219 (364)
                      +++.    .+++.+.+++.++|+++ ....+++|++|+|.| +|++|++++|+|+.+|++++.+ .+++ ++++++++|+
T Consensus       154 ~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga  231 (393)
T TIGR02819       154 RDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGC  231 (393)
T ss_pred             cccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCC
Confidence            8753    34677788889999998 468899999999976 7999999999999999986555 3444 4588999999


Q ss_pred             ceeeeCCChhHHHHhc-----CCccEEEECCCCc--------------hhHHHHHhhccCCCEEEEEccCchhhhhcccc
Q 017901          220 EQAVDYSSKDIELAIK-----GKFDAVLDTIGAP--------------ETERLGLNFLKRGGHYMTLHGETAALADHYGL  280 (364)
Q Consensus       220 ~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  280 (364)
                      +.+.+....++.+.+.     ..+|++|||+|.+              ..+..++++++++|+++.+|.......     
T Consensus       232 ~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~-----  306 (393)
T TIGR02819       232 ETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDP-----  306 (393)
T ss_pred             eEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccc-----
Confidence            7533333333433332     1399999999986              379999999999999999997511000     


Q ss_pred             ccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--ccc-eeeccccHHHHHHHHhcCCCCC
Q 017901          281 ALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVD-KTFHMTQVREAHEAKDKRLIPG  357 (364)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~-~~~~l~~~~eA~~~~~~~~~~g  357 (364)
                      ...........+++.....+.+++++.+.... ..+....+++++.+|++++  +++ +.|+|+|+++||+.+.+++. +
T Consensus       307 ~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~  384 (393)
T TIGR02819       307 GAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTP-VMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-K  384 (393)
T ss_pred             ccccccccccccccchHHhhccCceEEeccCC-hhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-e
Confidence            00000000001122223445666777664321 2234467999999999875  355 78999999999999988765 8


Q ss_pred             eEEEEcC
Q 017901          358 KVVLEFD  364 (364)
Q Consensus       358 kvvi~~~  364 (364)
                      |++++++
T Consensus       385 Kvvi~~~  391 (393)
T TIGR02819       385 KFVIDPH  391 (393)
T ss_pred             EEEEeCC
Confidence            9999863

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=6.8e-42  Score=316.53  Aligned_cols=301  Identities=19%  Similarity=0.209  Sum_probs=231.7

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccc-cCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-FEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      .+++++.   ++++++++ +.|.|. +++||+|||.++|||++|++.+.|..... ....+|+++|||++|+|+++|.+ 
T Consensus         3 ~~~~~~~---~~~~~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-   76 (341)
T cd08237           3 NQVYRLV---RPKFFEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-   76 (341)
T ss_pred             ccceEEe---ccceEEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence            3677887   56678999 999995 99999999999999999999999864221 12357999999999999998875 


Q ss_pred             CCCCCCCEEEEecCC--------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHH
Q 017901          108 RSLTVGQEVFGALHP--------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK  167 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~  167 (364)
                       .|++||||+.....                    ...+|+|+||+++|.++++++|+++++++||.+ .++.++|+++.
T Consensus        77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~  154 (341)
T cd08237          77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS  154 (341)
T ss_pred             -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence             69999999875321                    013599999999999999999999999887644 57788999885


Q ss_pred             Hh--cccCCCCEEEEEcCCchHHHHHHHHHHH-cC-CeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEE
Q 017901          168 CA--ARMSEGQRLLVLGGGGAVGFAAVQFSVA-SG-CHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       168 ~~--~~~~~g~~vli~g~~g~~G~~~~~~a~~-~g-~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vi  242 (364)
                      ..  +.+++|++|+|.| +|++|++++|+|++ .| ++|+++.+++++ +.+++.+++..++    ++.+.. + +|+||
T Consensus       155 ~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~~~~~-g-~d~vi  227 (341)
T cd08237         155 RFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DIPEDL-A-VDHAF  227 (341)
T ss_pred             HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hhhhcc-C-CcEEE
Confidence            42  4568899999999 69999999999986 55 578888766554 7777766653332    222222 5 99999


Q ss_pred             ECCCC---chhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901          243 DTIGA---PETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE  319 (364)
Q Consensus       243 d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (364)
                      ||+|+   +..+..++++++++|+++.+|....            +.      .+....++.+++++.+++.. +.++++
T Consensus       228 D~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~k~~~i~g~~~~-~~~~~~  288 (341)
T cd08237         228 ECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------------PV------PINTRMVLEKGLTLVGSSRS-TREDFE  288 (341)
T ss_pred             ECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------------Cc------ccCHHHHhhCceEEEEeccc-CHHHHH
Confidence            99995   3478999999999999999986410            11      11122456788899887643 467899


Q ss_pred             HHHHHHHcC-----Cceeccceeeccc---cHHHHHHHHhcCCCCCeEEEEcC
Q 017901          320 EIRRLSETG-----KLKIPVDKTFHMT---QVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       320 ~~~~~~~~g-----~i~~~~~~~~~l~---~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ++++++.++     .+++.++++|+|+   |+++||+...++ ..||+|++++
T Consensus       289 ~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         289 RAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             HHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            999999998     4667799999985   566666666554 5799999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.5e-41  Score=315.82  Aligned_cols=308  Identities=19%  Similarity=0.272  Sum_probs=249.8

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      .|||+++...+.+  ++++ +.|.|.+.++||+||+.++++|++|++.+.|..+    ..+|+++|||++|+|+++|+++
T Consensus         2 ~~ka~~~~~~~~~--~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v   74 (365)
T cd08277           2 KCKAAVAWEAGKP--LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGV   74 (365)
T ss_pred             ccEEEEEccCCCC--cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCC
Confidence            4789989876544  8888 9999999999999999999999999999988643    3578999999999999999999


Q ss_pred             CCCCCCCEEEEecCCC-------------------------------------------CCCCcceeEEeecCCccccCC
Q 017901          108 RSLTVGQEVFGALHPT-------------------------------------------AVRGTYADYAVLSEDELTPKP  144 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~~~~~ip  144 (364)
                      +.+++||+|+......                                           ...|+|+||+.++.+.++++|
T Consensus        75 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP  154 (365)
T cd08277          75 TNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKID  154 (365)
T ss_pred             ccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECC
Confidence            9999999998752100                                           014899999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCcee
Q 017901          145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQA  222 (364)
Q Consensus       145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v  222 (364)
                      +++++++++.+++++.|||+++.+.+.+++|++|+|+| +|.+|++++|+|+.+|+ +|+++.+++++ +.++++|++++
T Consensus       155 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~  233 (365)
T cd08277         155 PAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDF  233 (365)
T ss_pred             CCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence            99999999999999999999887788999999999998 69999999999999999 68888776554 78899999999


Q ss_pred             eeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901          223 VDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (364)
Q Consensus       223 ~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (364)
                      ++....  ++.+.++    +++|++|||+|+...+..++++++++ |+++.+|....           ...      ++.
T Consensus       234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-----------~~~------~~~  296 (365)
T cd08277         234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-----------AEL------SIR  296 (365)
T ss_pred             eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-----------ccc------ccC
Confidence            887542  2333332    23999999999876889999999885 99999986511           000      001


Q ss_pred             hhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          296 MQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ...+.. ++++.+++...  ...++.++++++.++.++  +.+++.|+|+|+++||+.+.+++. .|+++.
T Consensus       297 ~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~  365 (365)
T cd08277         297 PFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT  365 (365)
T ss_pred             HhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence            111222 67777776532  245789999999998765  468999999999999999988874 688863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-41  Score=312.71  Aligned_cols=313  Identities=19%  Similarity=0.243  Sum_probs=247.0

Q ss_pred             ceeeEEeccc--CC--CceEEEccc---ccCC-CCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCccccc--cee
Q 017901           28 SCRAVVLPRF--GG--PEVLEVRPN---VEVP-DLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGR--DIS   97 (364)
Q Consensus        28 ~~~a~~~~~~--g~--~~~~~~~~~---~~~p-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~--e~~   97 (364)
                      ++|.|++.+.  |.  ++.++++ +   .+.| ++++||||||+.|+++|+.|+..+.+....   ...|+++|+  |++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~f~~~-~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~---~~~p~~~G~~~~~~   83 (348)
T PLN03154          8 ENKQVILKNYIDGIPKETDMEVK-LGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS---YLPPFVPGQRIEGF   83 (348)
T ss_pred             cceEEEEecCCCCCCCcccEEEE-eecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC---CCCCcCCCCeeEee
Confidence            4577777533  22  3678887 5   3555 458999999999999999998755442211   135889997  889


Q ss_pred             EEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCc--c--ccCCCCCChh-hhccccchHHHHHHHHHHhccc
Q 017901           98 GEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE--L--TPKPVSVTHA-DASAIPFAALTAWRALKCAARM  172 (364)
Q Consensus        98 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~--~--~~ip~~~~~~-~aa~~~~~~~ta~~~l~~~~~~  172 (364)
                      |+|..+|+++++|++||+|+++       |+|++|++++.+.  +  +++|+++++. ++++++++++|||+++.+.+.+
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~-------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~  156 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGI-------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSP  156 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEec-------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCC
Confidence            9999999999999999999875       6899999998753  5  4559999986 6888999999999999778899


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceeeeCCCh-hHHHHhc----CCccEEEECC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAVDYSSK-DIELAIK----GKFDAVLDTI  245 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~~~~~~-~~~~~i~----g~~D~vid~~  245 (364)
                      ++|++|+|+|++|++|++++|+|+.+|++|+++++++++ +.++ ++|+++++++++. ++.+.++    +.+|++|||+
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~v  236 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNV  236 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECC
Confidence            999999999988999999999999999999998877655 6666 7999999998753 5554443    2399999999


Q ss_pred             CCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHHHH
Q 017901          246 GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLEEI  321 (364)
Q Consensus       246 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  321 (364)
                      |+. .+..++++++++|+++.+|....           .+.... ........++.+++++.+++...    ..+.++++
T Consensus       237 G~~-~~~~~~~~l~~~G~iv~~G~~~~-----------~~~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~  303 (348)
T PLN03154        237 GGD-MLDAALLNMKIHGRIAVCGMVSL-----------NSLSAS-QGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENV  303 (348)
T ss_pred             CHH-HHHHHHHHhccCCEEEEECcccc-----------CCCCCC-CCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHH
Confidence            986 89999999999999999986511           000000 00001123566788888876531    13567889


Q ss_pred             HHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       322 ~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ++++++|++++.+.+.|+|+++++||+.+.+++..||+|+++.
T Consensus       304 ~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~  346 (348)
T PLN03154        304 SRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVA  346 (348)
T ss_pred             HHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence            9999999999888889999999999999999999999999863

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3e-41  Score=313.53  Aligned_cols=304  Identities=21%  Similarity=0.287  Sum_probs=246.0

Q ss_pred             EEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCC
Q 017901           32 VVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT  111 (364)
Q Consensus        32 ~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~  111 (364)
                      +++.+++.+  ++++ +.|.|.|+++||+||+.++|+|++|++.+.+...  ....+|.++|||++|+|+++|++++.+ 
T Consensus         2 ~~~~~~g~~--~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-   75 (349)
T TIGR03201         2 WMMTEPGKP--MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-   75 (349)
T ss_pred             ceEecCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-
Confidence            456656654  7888 9999999999999999999999999998744221  122568999999999999999999887 


Q ss_pred             CCCEEEEecC-----------------------CCCCCCcceeEEeecCCccccCCC------CCChhhhccccchHHHH
Q 017901          112 VGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPV------SVTHADASAIPFAALTA  162 (364)
Q Consensus       112 ~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta  162 (364)
                      +||+|+....                       ....+|+|++|+.++.+.++++|+      ++++++++.+++++.|+
T Consensus        76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta  155 (349)
T TIGR03201        76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP  155 (349)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence            9999987321                       011369999999999999999999      89999999999999999


Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCCh---hHHHHhc---
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSK---DIELAIK---  235 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~---~~~~~i~---  235 (364)
                      |+++. ...+++|++|+|+|+ |++|++++|+|+..|++|+++.+++++ +.++++|+++++++.+.   ++.+.++   
T Consensus       156 ~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t  233 (349)
T TIGR03201       156 YQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA  233 (349)
T ss_pred             HHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence            99984 588999999999996 999999999999999999998766554 88899999999887653   3444433   


Q ss_pred             ---CCcc----EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEE
Q 017901          236 ---GKFD----AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSY  308 (364)
Q Consensus       236 ---g~~D----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (364)
                         | +|    ++|||+|+...+..++++++++|+++.+|....            +.      .++...++.++.++.+
T Consensus       234 ~~~g-~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~~~g  294 (349)
T TIGR03201       234 KARG-LRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------------KT------EYRLSNLMAFHARALG  294 (349)
T ss_pred             ccCC-CCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------------Cc------ccCHHHHhhcccEEEE
Confidence               3 65    899999998678889999999999999997511            11      1111234556777887


Q ss_pred             EEeccCHHHHHHHHHHHHcCCceec-cceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          309 IYMRADAEGLEEIRRLSETGKLKIP-VDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~g~i~~~-~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .+.. +.+++..+++++.+|++++. +.+.|+|+|+++||+.+.+++..||+++++
T Consensus       295 ~~~~-~~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       295 NWGC-PPDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             EecC-CHHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence            7643 46789999999999999752 334799999999999999999889999864

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.1e-41  Score=320.55  Aligned_cols=315  Identities=19%  Similarity=0.229  Sum_probs=244.1

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhh-ccCCccc---cCCCCCcccccceeEEEEee
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSI---FEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~---~~~~~p~~~G~e~~G~V~~v  103 (364)
                      .|+++++..+   ..++++ +.|.|.|+++||+||+.++|||++|++.+ .|.....   ....+|+++|||++|+|+++
T Consensus         2 ~~~a~~~~~~---~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v   77 (410)
T cd08238           2 KTKAWRMYGK---GDLRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV   77 (410)
T ss_pred             CcEEEEEEcC---CceEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence            5889999854   458999 99999999999999999999999999976 4542111   01246889999999999999


Q ss_pred             cCCCC-CCCCCCEEEEecCC------------CCCCCcceeEEeecCC----ccccCCCCCChhhhccc-cch-HHHHHH
Q 017901          104 GASVR-SLTVGQEVFGALHP------------TAVRGTYADYAVLSED----ELTPKPVSVTHADASAI-PFA-ALTAWR  164 (364)
Q Consensus       104 G~~~~-~~~~Gd~V~~~~~~------------~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~-~~~-~~ta~~  164 (364)
                      |++++ .|++||||+.....            ...+|+|++|++++.+    .++++|+++++.+++.+ +.+ ..+++.
T Consensus        78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~  157 (410)
T cd08238          78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT  157 (410)
T ss_pred             CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence            99998 59999999875320            1136999999999987    68999999999988865 321 122343


Q ss_pred             HH--------HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC---eEEEeeCCccH-HHHHHc--------CCc-eee
Q 017901          165 AL--------KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKSI-DRVLAA--------GAE-QAV  223 (364)
Q Consensus       165 ~l--------~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~---~vi~~~~~~~~-~~~~~~--------g~~-~v~  223 (364)
                      ++        .+.+++++|++|+|+|++|++|++++|+|+.+|+   +|+++..++++ +.++++        |++ .++
T Consensus       158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i  237 (410)
T cd08238         158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV  237 (410)
T ss_pred             hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE
Confidence            32        2457889999999999899999999999999864   79888776654 778886        766 467


Q ss_pred             eCCC-hhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhh
Q 017901          224 DYSS-KDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (364)
Q Consensus       224 ~~~~-~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (364)
                      +++. .++.+.++    + .+|++||++|++..+..++++++++|+++.+++...          . ..    ..+++..
T Consensus       238 ~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~----------~-~~----~~~~~~~  302 (410)
T cd08238         238 NPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVD----------K-NF----SAPLNFY  302 (410)
T ss_pred             CCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCC----------C-Cc----cccccHH
Confidence            7654 34444332    1 399999999987789999999999999887754310          0 00    0112223


Q ss_pred             hhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          298 TWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .+..+++++.+++.. ..++++++++++.+|++++  .++++|+|+|+++||+.+. ++..||+|+.+
T Consensus       303 ~~~~~~~~i~g~~~~-~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         303 NVHYNNTHYVGTSGG-NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             HhhhcCcEEEEeCCC-CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence            567788999998754 5678999999999999987  5899999999999999998 67779999976

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=7.1e-41  Score=311.50  Aligned_cols=307  Identities=21%  Similarity=0.268  Sum_probs=251.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCC---cc-----ccCCCCCcccccceeEEE
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG---RS-----IFEPLLPLILGRDISGEV  100 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~-----~~~~~~p~~~G~e~~G~V  100 (364)
                      |||+++.++   +.++++ +.+.|.|+++||+||+.++++|++|++.+.+..   +.     .....+|.++|||++|+|
T Consensus         1 mka~~~~~~---~~l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   76 (351)
T cd08233           1 MKAARYHGR---KDIRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV   76 (351)
T ss_pred             CceEEEecC---CceEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence            789999854   458999 999999999999999999999999998765421   10     001236889999999999


Q ss_pred             EeecCCCCCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901          101 AAVGASVRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (364)
Q Consensus       101 ~~vG~~~~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (364)
                      +++|+++++|++||+|++....                        ...+|+|++|+.++.+.++++|+++++++++.+ 
T Consensus        77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-  155 (351)
T cd08233          77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-  155 (351)
T ss_pred             EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence            9999999999999999974320                        012599999999999999999999999988766 


Q ss_pred             chHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh
Q 017901          157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI  234 (364)
Q Consensus       157 ~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i  234 (364)
                      .++.|||+++ ..+++++|++|+|+| +|.+|++++|+|+.+|+ +|+++.+++++ +.++++|++.++++++.++.+.+
T Consensus       156 ~~~~ta~~~l-~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l  233 (351)
T cd08233         156 EPLAVAWHAV-RRSGFKPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEV  233 (351)
T ss_pred             cHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHH
Confidence            5778999998 778999999999998 69999999999999999 78888766554 77788999999998877666555


Q ss_pred             c----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEE
Q 017901          235 K----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI  309 (364)
Q Consensus       235 ~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (364)
                      +    + .+|++|||+|+...+..++++++++|+++.+|...            .+.      .++...+..+++++.++
T Consensus       234 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~------------~~~------~~~~~~~~~~~~~i~g~  295 (351)
T cd08233         234 RKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE------------KPI------SFNPNDLVLKEKTLTGS  295 (351)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC------------CCC------ccCHHHHHhhCcEEEEE
Confidence            3    2 39999999997668899999999999999999751            011      11222456778899888


Q ss_pred             EeccCHHHHHHHHHHHHcCCcee--ccceeeccccH-HHHHHHHhcCCCC-CeEEE
Q 017901          310 YMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQV-REAHEAKDKRLIP-GKVVL  361 (364)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~-~eA~~~~~~~~~~-gkvvi  361 (364)
                      +.. ..+++++++++++++.+++  .++++|+|+|+ ++||+.+.+++.. +|+||
T Consensus       296 ~~~-~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         296 ICY-TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             ecc-CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            754 4578999999999999964  57889999996 7999999988874 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=9.8e-41  Score=307.18  Aligned_cols=308  Identities=28%  Similarity=0.356  Sum_probs=258.2

Q ss_pred             eeeEEecccCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      ||++++.+++.+ +.+++. ++|.|.+.++||+||+.++++|++|+..+.|..+.  ....|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v   77 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGV   77 (324)
T ss_pred             CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCC
Confidence            689999877765 568899 99999999999999999999999999999886532  12457899999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      +++++||+|+++..    .|+|++|+.++...++++|+++++.+++.+++.+++||+++ ..+++++|++|+|+|++|.+
T Consensus        78 ~~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~i  152 (324)
T cd08292          78 KGLQVGQRVAVAPV----HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAV  152 (324)
T ss_pred             CCCCCCCEEEeccC----CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHH
Confidence            99999999999762    48999999999999999999999999999998899999998 56899999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      |++++|+|+.+|+++++++++++. +.++++|+++++++++.++.+.+.    + ++|++|||+|+. ....++++++++
T Consensus       153 g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~  231 (324)
T cd08292         153 GKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG  231 (324)
T ss_pred             HHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC
Confidence            999999999999999999776654 677788999898887766655543    1 399999999997 888999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc---------CHHHHHHHHHHHHcCCcee
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA---------DAEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~i~~  332 (364)
                      |+++.+|....           ...      .+.......+++++.++....         ..+.+..+++++.++.+++
T Consensus       232 g~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~  294 (324)
T cd08292         232 GTLVSFGSMSG-----------EPM------QISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLL  294 (324)
T ss_pred             cEEEEEecCCC-----------CCC------cCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence            99999986410           010      111112455788888876521         1346888999999999987


Q ss_pred             ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          333 PVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       333 ~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .+.+.|+++|+++|++.+.++...+|++++
T Consensus       295 ~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         295 PVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             ccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            678899999999999999988888899874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2.3e-40  Score=305.34  Aligned_cols=307  Identities=20%  Similarity=0.238  Sum_probs=246.1

Q ss_pred             ceeeEEeccc--CCC--ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           28 SCRAVVLPRF--GGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        28 ~~~a~~~~~~--g~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      .|++|++.++  |++  +.++++ +.+.|+|++|||+|||.++|||+.|.....+      ....|.++|+|++|+|++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~------~~~~p~v~G~e~~G~V~~-   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR------LNEGDTMIGTQVAKVIES-   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc------CCCCCcEecceEEEEEec-
Confidence            4899999983  454  789999 9999999999999999999999987652111      114588999999999995 


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCC---ccccCCCCCC--h---hhhccccchHHHHHHHHHHhcccCCC
Q 017901          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSED---ELTPKPVSVT--H---ADASAIPFAALTAWRALKCAARMSEG  175 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~---~~~~ip~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g  175 (364)
                        .++.|++||+|+++       ++|++|++++.+   .++++|++++  +   ..+++++++++|||+++.+.+++++|
T Consensus        74 --~~~~~~~Gd~V~~~-------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g  144 (329)
T cd08294          74 --KNSKFPVGTIVVAS-------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAG  144 (329)
T ss_pred             --CCCCCCCCCEEEee-------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCC
Confidence              44679999999975       579999999999   9999999988  2   33346788999999999788999999


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchh
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~  250 (364)
                      ++++|+|++|++|++++|+|+.+|++|+++++++++ +.++++|+++++++++.++.+.++    +.+|++||++|+. .
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~-~  223 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGE-F  223 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHH-H
Confidence            999999999999999999999999999999876655 888999999999998777666553    2399999999996 8


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC----HHHHHHHHHHHH
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD----AEGLEEIRRLSE  326 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  326 (364)
                      +..++++++++|+++.+|....     +......+.      .........+++++.+++....    .+.+++++++++
T Consensus       224 ~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  292 (329)
T cd08294         224 SSTVLSHMNDFGRVAVCGSIST-----YNDKEPKKG------PYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIK  292 (329)
T ss_pred             HHHHHHhhccCCEEEEEcchhc-----cCCCCCCcC------cccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHH
Confidence            8999999999999999985311     100000000      0011134556777777654211    345778899999


Q ss_pred             cCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          327 TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       327 ~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++++.....|+++++++|++.+.+++..||+|+++
T Consensus       293 ~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         293 EGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             CCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            9999987667799999999999999999999999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=2.8e-40  Score=305.93  Aligned_cols=311  Identities=22%  Similarity=0.241  Sum_probs=245.0

Q ss_pred             eeeEEecccCCCceEEEcccccC----CCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccce--eEEEEe
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEV----PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDI--SGEVAA  102 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~----p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~  102 (364)
                      +|+|....+. ++.++++ +.++    |+|++|||||||+|++||+.|++...|..+.  ....|+++|+++  .|.+..
T Consensus         8 ~~~~~~~~~~-~~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~   83 (338)
T cd08295           8 LKAYVTGFPK-ESDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKV   83 (338)
T ss_pred             EecCCCCCCC-ccceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEE
Confidence            4566544332 4678998 8877    7899999999999999999999999885321  124578889754  456666


Q ss_pred             ecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecC-CccccCC-CCCChh-hhccccchHHHHHHHHHHhcccCCCCEEE
Q 017901          103 VGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE-DELTPKP-VSVTHA-DASAIPFAALTAWRALKCAARMSEGQRLL  179 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  179 (364)
                      +|+++++|++||+|+++       |+|+||++++. +.++++| +++++. ++++++++++|||+++.+.+++++|++|+
T Consensus        84 v~~~v~~~~vGd~V~~~-------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~Vl  156 (338)
T cd08295          84 VDSGNPDFKVGDLVWGF-------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVF  156 (338)
T ss_pred             EecCCCCCCCCCEEEec-------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEE
Confidence            78888899999999875       68999999999 7999995 678886 78999999999999997788999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-cCCceeeeCCC-hhHHHHhc----CCccEEEECCCCchhHH
Q 017901          180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAEQAVDYSS-KDIELAIK----GKFDAVLDTIGAPETER  252 (364)
Q Consensus       180 i~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-~g~~~v~~~~~-~~~~~~i~----g~~D~vid~~g~~~~~~  252 (364)
                      |+|++|++|++++|+|+.+|++|+++++++++ +.+++ +|+++++++++ .++.+.+.    +++|++||++|+. .+.
T Consensus       157 I~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~  235 (338)
T cd08295         157 VSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK-MLD  235 (338)
T ss_pred             EecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH-HHH
Confidence            99999999999999999999999998876665 77777 99999998754 35554443    2399999999986 899


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC----HHHHHHHHHHHHcC
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD----AEGLEEIRRLSETG  328 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g  328 (364)
                      .++++++++|+++.+|....           ...... ...........+++++.++.....    .+.++++++++.+|
T Consensus       236 ~~~~~l~~~G~iv~~G~~~~-----------~~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g  303 (338)
T cd08295         236 AVLLNMNLHGRIAACGMISQ-----------YNLEWP-EGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEG  303 (338)
T ss_pred             HHHHHhccCcEEEEeccccc-----------CCCCCC-CCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCC
Confidence            99999999999999986411           000000 000011134556677777654321    34578889999999


Q ss_pred             CceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          329 KLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       329 ~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++.+...|+|+++++|++.+.+++..||+|+++
T Consensus       304 ~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         304 KLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             CeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            99987767799999999999999999999999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=5.3e-40  Score=304.99  Aligned_cols=307  Identities=20%  Similarity=0.258  Sum_probs=235.0

Q ss_pred             CceEEEcccccCCCCC-CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEE
Q 017901           40 PEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFG  118 (364)
Q Consensus        40 ~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~  118 (364)
                      ++.++++ +.+.|+|. +|||+|||.|+|||+.|+..............+|+++|||++|+|+++|+++++|++||+|++
T Consensus        20 ~~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   98 (345)
T cd08293          20 AENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS   98 (345)
T ss_pred             ccceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence            4789999 99999874 999999999999999997543221110112356789999999999999999999999999987


Q ss_pred             ecCCCCCCCcceeEEeecCCccccCCCCCChhh----hccccchHHHHHHHHHHhcccCCC--CEEEEEcCCchHHHHHH
Q 017901          119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD----ASAIPFAALTAWRALKCAARMSEG--QRLLVLGGGGAVGFAAV  192 (364)
Q Consensus       119 ~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g--~~vli~g~~g~~G~~~~  192 (364)
                      +.      +.|++|++++.+.++++|+++++.+    +++++.+++|||+++.+.+++++|  ++|+|+|++|++|++++
T Consensus        99 ~~------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~ai  172 (345)
T cd08293          99 FN------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAG  172 (345)
T ss_pred             cC------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHH
Confidence            52      5799999999999999999864432    456677899999999777888877  99999998999999999


Q ss_pred             HHHHHcCC-eEEEeeCCccH-HHHHH-cCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEE
Q 017901          193 QFSVASGC-HVSATCGSKSI-DRVLA-AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYM  265 (364)
Q Consensus       193 ~~a~~~g~-~vi~~~~~~~~-~~~~~-~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v  265 (364)
                      |+|+++|+ +|+++++++++ +.+++ +|+++++++++.++.+.++    +++|++|||+|+. .+..++++++++|+++
T Consensus       173 qlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv  251 (345)
T cd08293         173 QIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNENSHII  251 (345)
T ss_pred             HHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccCCEEE
Confidence            99999999 79999877665 66655 9999999988776665553    2399999999997 7899999999999999


Q ss_pred             EEccCchhhhhccccccccchhhHHHHHHhh-hhhhccceeEEEEEeccC----HHHHHHHHHHHHcCCceeccceeecc
Q 017901          266 TLHGETAALADHYGLALGLPIATTVLLKKRM-QTWYSYGIDYSYIYMRAD----AEGLEEIRRLSETGKLKIPVDKTFHM  340 (364)
Q Consensus       266 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~i~~~~~~~~~l  340 (364)
                      .+|....     +.  ...+..  ..+.... .....+++.+..+.....    .+.++++++++.++++++.....+++
T Consensus       252 ~~G~~~~-----~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l  322 (345)
T cd08293         252 LCGQISQ-----YN--KDVPYP--PPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGL  322 (345)
T ss_pred             EEeeeec-----cc--CccCcc--ccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecH
Confidence            9985311     00  000000  0000000 011234444444432111    34577888999999998776666799


Q ss_pred             ccHHHHHHHHhcCCCCCeEEEEc
Q 017901          341 TQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       341 ~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++++||+.+.+++..||+|+++
T Consensus       323 ~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         323 ENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHHHHhcCCCCCeEEEEC
Confidence            99999999999999889999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.8e-40  Score=304.41  Aligned_cols=305  Identities=24%  Similarity=0.280  Sum_probs=256.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++..+++  .++++ +.|.|.+.++||+||+.++++|++|+..+.|..+.   ...|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~--~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~   74 (333)
T cd08296           1 YKAVQVTEPGG--PLELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVS   74 (333)
T ss_pred             CeEEEEccCCC--CceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCc
Confidence            78999997644  38888 99999999999999999999999999999886432   24578999999999999999999


Q ss_pred             CCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      ++++||+|+.....                        ...+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  154 (333)
T cd08296          75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN  154 (333)
T ss_pred             cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence            99999999863210                        012589999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---CCccE
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---GKFDA  240 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---g~~D~  240 (364)
                      ++. ...+.++++|+|+| +|.+|++++++|+.+|++|+++++++++ +.++++|+++++++...++.+.+.   + +|+
T Consensus       155 ~~~-~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~-~d~  231 (333)
T cd08296         155 ALR-NSGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGG-AKL  231 (333)
T ss_pred             HHH-hcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCC-CCE
Confidence            985 45899999999999 8999999999999999999999877654 788999999999887766555443   5 999


Q ss_pred             EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE  320 (364)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (364)
                      ++|++|....+..++++++++|+++.+|...              .    ..+++...++.+++++.++... ...++..
T Consensus       232 vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~--------------~----~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~  292 (333)
T cd08296         232 ILATAPNAKAISALVGGLAPRGKLLILGAAG--------------E----PVAVSPLQLIMGRKSIHGWPSG-TALDSED  292 (333)
T ss_pred             EEECCCchHHHHHHHHHcccCCEEEEEecCC--------------C----CCCcCHHHHhhcccEEEEeCcC-CHHHHHH
Confidence            9999986658999999999999999998751              0    1111222456789999987743 4678889


Q ss_pred             HHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      +++++.++++++.+ +.|+++|+++||+.+.+++..||+|++
T Consensus       293 ~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         293 TLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            99999999888765 589999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=7.3e-40  Score=305.85  Aligned_cols=309  Identities=27%  Similarity=0.354  Sum_probs=250.9

Q ss_pred             eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~  109 (364)
                      |++++.+++.  .++++ +.+.|.|+++||+||+.++++|++|+....|..+.   ..+|.++|||++|+|+++|++++.
T Consensus         2 ka~~~~~~~~--~l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~   75 (361)
T cd08231           2 RAAVLTGPGK--PLEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTT   75 (361)
T ss_pred             eEEEEcCCCC--CCEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCccc
Confidence            6888997773  48999 99999999999999999999999999999886431   357889999999999999999986


Q ss_pred             ------CCCCCEEEEecCC------------------------------CCCCCcceeEEeecCC-ccccCCCCCChhhh
Q 017901          110 ------LTVGQEVFGALHP------------------------------TAVRGTYADYAVLSED-ELTPKPVSVTHADA  152 (364)
Q Consensus       110 ------~~~Gd~V~~~~~~------------------------------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~a  152 (364)
                            |++||+|++....                              ....|+|++|+.++.+ .++++|++++..++
T Consensus        76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a  155 (361)
T cd08231          76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA  155 (361)
T ss_pred             cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence                  9999999987321                              0135899999999996 79999999999999


Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDI  230 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~  230 (364)
                      +++++++.|||+++.+....++|++|||+| +|.+|++++++|+.+|+ +|+++.+++++ .+++++|++.+++++..++
T Consensus       156 a~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  234 (361)
T cd08231         156 APANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPD  234 (361)
T ss_pred             HHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCccccc
Confidence            998899999999997666667999999998 79999999999999999 89988776655 7788999998888765432


Q ss_pred             H---HHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcc
Q 017901          231 E---LAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY  302 (364)
Q Consensus       231 ~---~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (364)
                      .   ..+.     ..+|++|||+|+...+..++++++++|+++.+|....            ..    ...+....++.+
T Consensus       235 ~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~----~~~~~~~~~~~~  298 (361)
T cd08231         235 PQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAP------------AG----TVPLDPERIVRK  298 (361)
T ss_pred             HHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCC------------CC----ccccCHHHHhhc
Confidence            2   2222     1399999999986588999999999999999986510            00    011111235777


Q ss_pred             ceeEEEEEeccCHHHHHHHHHHHHcC--Cc--eeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          303 GIDYSYIYMRADAEGLEEIRRLSETG--KL--KIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~g--~i--~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++.+++.. +.+++.++++++.++  .+  .+.+++.|+++|+++||+.+.++.. +|+||++
T Consensus       299 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         299 NLTIIGVHNY-DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             ccEEEEcccC-CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            8888888754 466788889999887  43  3467889999999999999988774 8999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=6.5e-40  Score=302.53  Aligned_cols=309  Identities=24%  Similarity=0.294  Sum_probs=237.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCc-ccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL-ILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~~  107 (364)
                      |+++++..++..  .+++ +.+.|.+.|++|+|||.++|||+||++.++|..+..   ..|. ++|||++|+|+++| .+
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~---~~~~~i~GHE~~G~V~evG-~~   73 (350)
T COG1063           1 MKAAVVYVGGGD--VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV---PPGDIILGHEFVGEVVEVG-VV   73 (350)
T ss_pred             CceeEEEecCCc--cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC---CCCCcccCccceEEEEEec-cc
Confidence            556666644433  3366 776777899999999999999999999999964322   3344 89999999999999 77


Q ss_pred             CCCCCCCEEEEecCCC----------------------------CCCCcceeEEeecCCcccc-CCCCCChhhhccccch
Q 017901          108 RSLTVGQEVFGALHPT----------------------------AVRGTYADYAVLSEDELTP-KPVSVTHADASAIPFA  158 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~----------------------------~~~g~~~~~~~~~~~~~~~-ip~~~~~~~aa~~~~~  158 (364)
                      +.+++||||+......                            ..+|+|+||+.+|.+++++ +|+++ ..+++++..+
T Consensus        74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~ep  152 (350)
T COG1063          74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEP  152 (350)
T ss_pred             cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcCh
Confidence            8899999998764310                            1469999999999765555 58888 6667777778


Q ss_pred             HHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHH-cCCceeeeCCChhHHHHhc
Q 017901          159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA-AGAEQAVDYSSKDIELAIK  235 (364)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~-~g~~~v~~~~~~~~~~~i~  235 (364)
                      +.++|++........++++|+|.| +|++|++++++++.+|+ +|+++..+++ ++++++ .|++.+++...++....+.
T Consensus       153 la~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~  231 (350)
T COG1063         153 LATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL  231 (350)
T ss_pred             hhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHH
Confidence            889987744556666667999999 89999999999999998 5666655554 488888 6666666554433333332


Q ss_pred             ----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901          236 ----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY  310 (364)
Q Consensus       236 ----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (364)
                          | .+|++|||+|....+..++++++++|+++.+|....            ..    . .++...+..+++++.|..
T Consensus       232 ~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~------------~~----~-~~~~~~~~~kel~l~gs~  294 (350)
T COG1063         232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGG------------ED----I-PLPAGLVVSKELTLRGSL  294 (350)
T ss_pred             HHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCC------------cc----C-ccCHHHHHhcccEEEecc
Confidence                2 399999999998789999999999999999997611            10    0 122236788999999986


Q ss_pred             eccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCC-CCeEEEEc
Q 017901          311 MRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLI-PGKVVLEF  363 (364)
Q Consensus       311 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~-~gkvvi~~  363 (364)
                      ......+++.+++++.+|++.+  +++++++++|+++||+.+.+++. ..|+++++
T Consensus       295 ~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         295 RPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             CCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            4335678999999999999986  47899999999999999988655 45988864

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.2e-39  Score=300.14  Aligned_cols=296  Identities=19%  Similarity=0.251  Sum_probs=236.7

Q ss_pred             CCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEE
Q 017901           38 GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVF  117 (364)
Q Consensus        38 g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~  117 (364)
                      .+++.+++. +.+.|.|++|||+|||.|+|+|+.|+   .|..+.   ...|.++|.|++|+|+++|+   .|++||+|+
T Consensus        14 ~~~~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~---~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~   83 (325)
T TIGR02825        14 PTDSDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAKRL---KEGDTMMGQQVARVVESKNV---ALPKGTIVL   83 (325)
T ss_pred             CCCCceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccCcC---CCCCcEecceEEEEEEeCCC---CCCCCCEEE
Confidence            456789999 99999999999999999999999654   343211   13478999999999999874   599999999


Q ss_pred             EecCCCCCCCcceeEEeecCCccccC----CCCCChhhh-ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHH
Q 017901          118 GALHPTAVRGTYADYAVLSEDELTPK----PVSVTHADA-SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAV  192 (364)
Q Consensus       118 ~~~~~~~~~g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~  192 (364)
                      ++       ++|++|++++.+.+.++    |++++++++ +++++++.|||+++.+.+++++|++|+|+|++|++|++++
T Consensus        84 ~~-------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~ai  156 (325)
T TIGR02825        84 AS-------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVG  156 (325)
T ss_pred             Ee-------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHH
Confidence            85       46999999999887777    999999987 6789999999999888899999999999999999999999


Q ss_pred             HHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCCh-hHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEE
Q 017901          193 QFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSK-DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMT  266 (364)
Q Consensus       193 ~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~-~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~  266 (364)
                      |+|+..|++|+++++++++ +.++++|+++++++.+. ++.+.+.    +++|++|||+|+. .+..++++++++|+++.
T Consensus       157 qlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~  235 (325)
T TIGR02825       157 QIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAI  235 (325)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcCcEEEE
Confidence            9999999999999877655 88899999999998764 4443332    2399999999987 78999999999999999


Q ss_pred             EccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----CHHHHHHHHHHHHcCCceeccceeeccc
Q 017901          267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----DAEGLEEIRRLSETGKLKIPVDKTFHMT  341 (364)
Q Consensus       267 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~i~~~~~~~~~l~  341 (364)
                      +|....     +......+.      ......+..+++++.+++...     ..+.+.++++++++|++++.+...|+|+
T Consensus       236 ~G~~~~-----~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~  304 (325)
T TIGR02825       236 CGAIST-----YNRTGPLPP------GPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFE  304 (325)
T ss_pred             ecchhh-----cccCCCCCC------CcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHH
Confidence            986411     000000000      000113455667777765421     1357889999999999998777789999


Q ss_pred             cHHHHHHHHhcCCCCCeEEEE
Q 017901          342 QVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       342 ~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ++++|++.+.+++..||+|++
T Consensus       305 ~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       305 NMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHHHHHhcCCCCCeEEeC
Confidence            999999999999999999974

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.5e-39  Score=301.02  Aligned_cols=315  Identities=29%  Similarity=0.398  Sum_probs=257.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc-----------------ccCCCCCcc
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS-----------------IFEPLLPLI   91 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-----------------~~~~~~p~~   91 (364)
                      ||++++...+.++.+.+..+.+.|.+.+++|+||+.++++|++|++.+.|.++.                 .....+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            688888877776677776235777889999999999999999999998875431                 012356889


Q ss_pred             cccceeEEEEeecCCCCCCCCCCEEEEecCC---------------CCCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901           92 LGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (364)
Q Consensus        92 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~---------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (364)
                      +|||++|+|+++|+++++|++||+|++....               ...+|+|++|+.++.+.++++|+++++.+++.++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~  160 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP  160 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence            9999999999999999999999999985311               1135899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH-Hh-
Q 017901          157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL-AI-  234 (364)
Q Consensus       157 ~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~i-  234 (364)
                      +++.|||+++ ....+++|++++|+|++|.+|++++++|+.+|+++++++++++++.++++|++.+++.......+ .. 
T Consensus       161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  239 (350)
T cd08274         161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKAL  239 (350)
T ss_pred             cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHHHHhh
Confidence            9999999998 77899999999999988999999999999999999999877656778899997666654433322 11 


Q ss_pred             c-CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          235 K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       235 ~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                      . ..+|++|||+|+. .+..++++++++|+++.+|....            .     ....+...++.+++++.++... 
T Consensus       240 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~------------~-----~~~~~~~~~~~~~~~~~~~~~~-  300 (350)
T cd08274         240 GGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAG------------P-----VVELDLRTLYLKDLTLFGSTLG-  300 (350)
T ss_pred             CCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCC------------c-----cccCCHHHhhhcceEEEEeecC-
Confidence            1 2399999999987 89999999999999999985410            0     0111122346778888887754 


Q ss_pred             CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ..+.+.++++++.++++++.+++.|+++++++|++.+.++...+|+|+++
T Consensus       301 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         301 TREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             CHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            56789999999999999888889999999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.4e-39  Score=300.04  Aligned_cols=309  Identities=27%  Similarity=0.360  Sum_probs=256.3

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++.+++++  +++. +.+.|.+.+++|+|++.++++|++|+....|.++...+..+|.++|+|++|+|+++|+++.
T Consensus         1 ~ka~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~   77 (340)
T cd05284           1 MKAARLYEYGKP--LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD   77 (340)
T ss_pred             CeeeEeccCCCC--ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence            689999987654  7888 8888999999999999999999999999988654333446688999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .|++||+|+++...                       ...+|+|++|+.++.++++++|+++++++++.++..+.|||++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~  157 (340)
T cd05284          78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA  157 (340)
T ss_pred             cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            99999999986421                       0136899999999999999999999999999999999999999


Q ss_pred             HHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CC
Q 017901          166 LKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GK  237 (364)
Q Consensus       166 l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~  237 (364)
                      +... ..+.++++|+|+| +|.+|++++++|+..| .+|+++.+++++ +.++++|++++++++.. +...+.     .+
T Consensus       158 l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~  235 (340)
T cd05284         158 VKKALPYLDPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRG  235 (340)
T ss_pred             HHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCC
Confidence            8665 4688999999999 6669999999999999 799998776554 77899999999988765 544443     23


Q ss_pred             ccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG  317 (364)
Q Consensus       238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (364)
                      +|+++||+|+......++++++++|+++.+|....           ....   .     .....+++++.+.... ..+.
T Consensus       236 ~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-----------~~~~---~-----~~~~~~~~~~~~~~~~-~~~~  295 (340)
T cd05284         236 ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-----------GRLP---T-----SDLVPTEISVIGSLWG-TRAE  295 (340)
T ss_pred             CCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-----------CccC---H-----HHhhhcceEEEEEecc-cHHH
Confidence            99999999985588999999999999999986410           0110   1     1224678888877643 4678


Q ss_pred             HHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          318 LEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       318 ~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +..++++++++.+++ ..+.|+++++++|++.+.+++..||+|+++
T Consensus       296 ~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         296 LVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             HHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            889999999999886 456899999999999999999889999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=7.4e-39  Score=296.23  Aligned_cols=306  Identities=27%  Similarity=0.422  Sum_probs=247.9

Q ss_pred             eeEEeccc---CCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           30 RAVVLPRF---GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        30 ~a~~~~~~---g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ||+++.++   ++++.++.. +.|.|.|.++||+||++++++|++|+..+.|..+   ...+|.++|+|++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~   76 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDE   76 (336)
T ss_pred             CceeeccccCCCCcccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCC
Confidence            57888887   788899999 9999999999999999999999999998888532   2246789999999999999999


Q ss_pred             CCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCC-----CCEEEEE
Q 017901          107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE-----GQRLLVL  181 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~vli~  181 (364)
                      ++.|++||+|+++... ...|+|++|+.++.+.++++|+++++++++.++++++|||+++....++++     |++++|+
T Consensus        77 v~~~~~Gd~V~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~  155 (336)
T TIGR02817        77 VTLFKPGDEVWYAGDI-DRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLII  155 (336)
T ss_pred             CCCCCCCCEEEEcCCC-CCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEE
Confidence            9999999999987521 124899999999999999999999999999999999999999877888877     9999999


Q ss_pred             cCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHH
Q 017901          182 GGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGL  255 (364)
Q Consensus       182 g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~  255 (364)
                      |++|.+|++++|+|+.+ |++|+++++++++ +.++++|+++++++.. ++...+.    +++|+++|++++......++
T Consensus       156 ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~  234 (336)
T TIGR02817       156 GGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIV  234 (336)
T ss_pred             cCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHH
Confidence            99999999999999998 9999999876654 7788999999998654 3444332    23999999987655889999


Q ss_pred             hhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec-------cC----HHHHHHHHHH
Q 017901          256 NFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR-------AD----AEGLEEIRRL  324 (364)
Q Consensus       256 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~  324 (364)
                      ++++++|+++.++..              ...  ..     ..+..+++++.+....       +.    ...+++++++
T Consensus       235 ~~l~~~G~~v~~~~~--------------~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  293 (336)
T TIGR02817       235 ELLAPQGRFALIDDP--------------AEL--DI-----SPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARL  293 (336)
T ss_pred             HHhccCCEEEEEccc--------------ccc--cc-----hhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHH
Confidence            999999999988532              000  00     0122233443332211       01    1457889999


Q ss_pred             HHcCCceeccceeec---cccHHHHHHHHhcCCCCCeEEEE
Q 017901          325 SETGKLKIPVDKTFH---MTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       325 ~~~g~i~~~~~~~~~---l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      +.++.+++.+++.|+   ++++++|++.+.+++..||+++.
T Consensus       294 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       294 VDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            999999876665554   78999999999999998999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=9.1e-39  Score=291.05  Aligned_cols=326  Identities=35%  Similarity=0.509  Sum_probs=253.1

Q ss_pred             ceeeEEeccc-CCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcccc-CCCCCcccccceeEE---EEe
Q 017901           28 SCRAVVLPRF-GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-EPLLPLILGRDISGE---VAA  102 (364)
Q Consensus        28 ~~~a~~~~~~-g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~---V~~  102 (364)
                      .++.+.+..+ ++......+ +.++|.|.++|++|++.++++|+.|+.+.+|...+.. ...+|.+++.++.|.   +..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~-~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~   82 (347)
T KOG1198|consen    4 KIRRVSLVSPPGGGEVLFSE-EVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVES   82 (347)
T ss_pred             ccceEEEeccCCCcceEEee-cccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEec
Confidence            3444444444 444556666 9999999999999999999999999999999765432 125675555555444   444


Q ss_pred             ec-CCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhc------ccCCC
Q 017901          103 VG-ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA------RMSEG  175 (364)
Q Consensus       103 vG-~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~g  175 (364)
                      .| ..+..+..||.+.....    .|+|++|+++|...++++|+++++.++|+++.++.|||.++....      ++++|
T Consensus        83 ~g~~~~~~~~~g~~~~~~~~----~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g  158 (347)
T KOG1198|consen   83 VGDDVVGGWVHGDAVVAFLS----SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKG  158 (347)
T ss_pred             cccccccceEeeeEEeeccC----CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCC
Confidence            55 33455667776666655    699999999999999999999999999999999999999998888      89999


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchh
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~  250 (364)
                      ++|||+||+|++|++++|+|++.| ++|+++++.+..++++++|+++++||++.++.+.+.    +++|+||||+|+. .
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~-~  237 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGS-T  237 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCC-c
Confidence            999999999999999999999999 678888888888999999999999999998888776    2499999999998 8


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCc
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKL  330 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  330 (364)
                      ......++..+|+...++..... ..++..    ...+.....+.......++..+...+...+.+.+..+.++++.+++
T Consensus       238 ~~~~~~~l~~~g~~~~i~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gki  312 (347)
T KOG1198|consen  238 LTKSLSCLLKGGGGAYIGLVGDE-LANYKL----DDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKI  312 (347)
T ss_pred             cccchhhhccCCceEEEEecccc-cccccc----ccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcc
Confidence            88888888888854444332100 000000    0000001111122233445556666666678999999999999999


Q ss_pred             eeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          331 KIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       331 ~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ++.+.+.||++++++||+.+.+++..||+++.++
T Consensus       313 kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  313 KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            9999999999999999999999999999999864

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2e-38  Score=291.72  Aligned_cols=313  Identities=30%  Similarity=0.398  Sum_probs=258.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++.+..+.+. +.+.|.+.++||+|++.++++|++|+....|..+.......|.++|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~   79 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD   79 (324)
T ss_pred             CeEEEEcCCCCccceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence            689999887777788888 8888888999999999999999999999888643222235578899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      .+++||+|++...  ...|+|++|+.++.+.++++|+++++.+++.+++.++|||. +...++++++++++|+|++|.+|
T Consensus        80 ~~~~Gd~V~~~~~--~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g  156 (324)
T cd08244          80 PAWLGRRVVAHTG--RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLG  156 (324)
T ss_pred             CCCCCCEEEEccC--CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHH
Confidence            9999999999861  12489999999999999999999999999999999999964 55778999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCC
Q 017901          189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G  262 (364)
                      ++++++|+.+|++|+++++++++ +.+.++|++.++++.+.++.+.+.     .++|+++||+|+. ....++++++++|
T Consensus       157 ~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g  235 (324)
T cd08244         157 SLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPGG  235 (324)
T ss_pred             HHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccCc
Confidence            99999999999999999876654 778889998888877665555443     1399999999998 7799999999999


Q ss_pred             EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceecccee
Q 017901          263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIPVDKT  337 (364)
Q Consensus       263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~~~~~  337 (364)
                      +++.+|....           ...      .......+.+++++.++.....     .+.+.++++++.++.+.+.+++.
T Consensus       236 ~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~  298 (324)
T cd08244         236 RFLTYGWASG-----------EWT------ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQT  298 (324)
T ss_pred             EEEEEecCCC-----------CCC------ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceE
Confidence            9999986511           000      0111123467777777665321     35678889999999998778889


Q ss_pred             eccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          338 FHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       338 ~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      |+++++++|++.+.++...||+++++
T Consensus       299 ~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         299 FPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             EeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999999999999999999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=8.1e-39  Score=297.67  Aligned_cols=312  Identities=22%  Similarity=0.238  Sum_probs=248.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++   .++++ +.+.|.+.++||+||+.++++|++|++.+.+..+.   ...|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~---~~~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~   73 (351)
T cd08285           1 MKAFAMLGIG---KVGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVK   73 (351)
T ss_pred             CceEEEccCC---ccEEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcC
Confidence            7899999655   36888 88889999999999999999999999988876432   24588999999999999999999


Q ss_pred             CCCCCCEEEEecCC--------------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhccccchHH
Q 017901          109 SLTVGQEVFGALHP--------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAAL  160 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~--------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~  160 (364)
                      ++++||+|++....                          ...+|+|++|+.++.+  .++++|+++++++++.++..+.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  153 (351)
T cd08285          74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS  153 (351)
T ss_pred             ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence            99999999984310                          0136899999999974  8999999999999999988999


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---
Q 017901          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---  235 (364)
Q Consensus       161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---  235 (364)
                      |||+++ ..+.+++|++|+|+| +|.+|++++|+|+.+|++ ++++.+++++ +.++++|+++++++...++.+.+.   
T Consensus       154 ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~  231 (351)
T cd08285         154 TGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLT  231 (351)
T ss_pred             hHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHh
Confidence            999996 678999999999997 799999999999999994 7777666554 778999999999887666555443   


Q ss_pred             --CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       236 --g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                        ..+|++|||+|+...+..++++++++|+++.+|....          ....    .++...........++.+.+...
T Consensus       232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----------~~~~----~~~~~~~~~~~~~~~i~~~~~~~  297 (351)
T cd08285         232 GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE----------DDYL----PIPREEWGVGMGHKTINGGLCPG  297 (351)
T ss_pred             CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC----------Ccee----ecChhhhhhhccccEEEEeecCC
Confidence              1399999999986688999999999999999986511          0000    00000001223344555544332


Q ss_pred             CHHHHHHHHHHHHcCCcee---ccceeeccccHHHHHHHHhcCCC-CCeEEEEc
Q 017901          314 DAEGLEEIRRLSETGKLKI---PVDKTFHMTQVREAHEAKDKRLI-PGKVVLEF  363 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~---~~~~~~~l~~~~eA~~~~~~~~~-~gkvvi~~  363 (364)
                      ..+.+.++++++.+|++++   .+.+.|+++|+++|++.+.+++. ..|+++++
T Consensus       298 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         298 GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            4567899999999999987   34556999999999999998874 57999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.6e-38  Score=296.84  Aligned_cols=311  Identities=25%  Similarity=0.315  Sum_probs=252.3

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ++|||+++.+++.+  ++++ +.+.|.+.++||+||+.++++|++|++...|.++    ..+|.++|||++|+|+++|++
T Consensus         1 ~~~~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~   73 (365)
T cd08278           1 MKTTAAVVREPGGP--FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSA   73 (365)
T ss_pred             CccEEeeeccCCCc--ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCC
Confidence            36899999986654  7888 9999999999999999999999999999988643    246889999999999999999


Q ss_pred             CCCCCCCCEEEEecCC---------------------------------------------CCCCCcceeEEeecCCccc
Q 017901          107 VRSLTVGQEVFGALHP---------------------------------------------TAVRGTYADYAVLSEDELT  141 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~---------------------------------------------~~~~g~~~~~~~~~~~~~~  141 (364)
                      ++.|++||+|++....                                             ....|+|++|+.++.++++
T Consensus        74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~  153 (365)
T cd08278          74 VTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVV  153 (365)
T ss_pred             cccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEE
Confidence            9999999999963210                                             0124899999999999999


Q ss_pred             cCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCC
Q 017901          142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGA  219 (364)
Q Consensus       142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~  219 (364)
                      ++|+++++.+++.++++++||++++...+.+++|++|+|+| +|.+|++++|+|+.+|+ +++++.+++++ +.++++|+
T Consensus       154 ~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~  232 (365)
T cd08278         154 KVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA  232 (365)
T ss_pred             ECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCC
Confidence            99999999999999999999999987888999999999997 69999999999999999 57777666655 77889999


Q ss_pred             ceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901          220 EQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (364)
Q Consensus       220 ~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (364)
                      +.+++++..++.+.+.    +.+|+++||+|+...+..++++++++|+++.+|....           ...     ...+
T Consensus       233 ~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~-----~~~~  296 (365)
T cd08278         233 THVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP-----------GAE-----VTLD  296 (365)
T ss_pred             cEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC-----------CCc-----cccC
Confidence            9999887665544442    2399999999976688999999999999999986410           000     0111


Q ss_pred             hhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee-ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          296 MQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI-PVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~-~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ...+..+++++.++....  ..+.+.+++++++++++.+ .+.+.|+++++++|++.+.+++. -|+|++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         297 VNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             HHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence            223346778887765421  2456788999999999865 35568999999999999988775 488763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=9.3e-39  Score=296.18  Aligned_cols=313  Identities=27%  Similarity=0.355  Sum_probs=257.7

Q ss_pred             eeeEEecccCCC-ceEEEcccccCCCCCC-CeEEEEEeEeecChhhhhhhccCCccccC--CCCCcccccceeEEEEeec
Q 017901           29 CRAVVLPRFGGP-EVLEVRPNVEVPDLKP-NEVLVRTRAVSINPLDTRMRSGYGRSIFE--PLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        29 ~~a~~~~~~g~~-~~~~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG  104 (364)
                      |||+++..++.+ +.+.++ +.|.|.|.+ ++|+||+.++|+|++|+..+.|..+....  ...|.++|||++|+|+++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG   79 (341)
T ss_pred             CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence            789999988765 468898 999998887 99999999999999999999886532211  1257799999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCC
Q 017901          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~  184 (364)
                      +++..|++||+|++...   ..|+|++|+.++.+.++++|+++++.+++.+++.++|||+++.....+++|++|+|+|++
T Consensus        80 ~~v~~~~~Gd~V~~~~~---~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  156 (341)
T cd08290          80 SGVKSLKPGDWVIPLRP---GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGAN  156 (341)
T ss_pred             CCCCCCCCCCEEEecCC---CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccch
Confidence            99999999999998753   248999999999999999999999999999999999999999777889999999999989


Q ss_pred             chHHHHHHHHHHHcCCeEEEeeCCc-----cHHHHHHcCCceeeeCCCh---hHHHHhc----CCccEEEECCCCchhHH
Q 017901          185 GAVGFAAVQFSVASGCHVSATCGSK-----SIDRVLAAGAEQAVDYSSK---DIELAIK----GKFDAVLDTIGAPETER  252 (364)
Q Consensus       185 g~~G~~~~~~a~~~g~~vi~~~~~~-----~~~~~~~~g~~~v~~~~~~---~~~~~i~----g~~D~vid~~g~~~~~~  252 (364)
                      |.+|++++|+|+..|++++++++++     +++.++++|++++++++..   ++...+.    +++|++|||+|+. .+.
T Consensus       157 g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~  235 (341)
T cd08290         157 SAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGK-SAT  235 (341)
T ss_pred             hHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcH-hHH
Confidence            9999999999999999999997764     2467788999999887664   4444433    2399999999997 777


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----C----HHHHHHHHH
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----D----AEGLEEIRR  323 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~  323 (364)
                      .++++++++|+++.+|....           .+.      .+.....+.+++++.+.+...     .    ...+..+++
T Consensus       236 ~~~~~l~~~G~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (341)
T cd08290         236 ELARLLSPGGTMVTYGGMSG-----------QPV------TVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAE  298 (341)
T ss_pred             HHHHHhCCCCEEEEEeccCC-----------CCc------ccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHH
Confidence            89999999999999986411           011      011113456788888876521     1    125788899


Q ss_pred             HHHcCCceeccceee---ccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          324 LSETGKLKIPVDKTF---HMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       324 ~~~~g~i~~~~~~~~---~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++.++.+.+.....+   +++++++|++.+.+++..||+|+++
T Consensus       299 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         299 LIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            999999987766667   9999999999999999889999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.7e-38  Score=299.73  Aligned_cols=319  Identities=26%  Similarity=0.340  Sum_probs=256.1

Q ss_pred             ccccceeeEEec--ccCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcccc-------CCCCCcccc
Q 017901           24 LVTTSCRAVVLP--RFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-------EPLLPLILG   93 (364)
Q Consensus        24 ~~~~~~~a~~~~--~~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-------~~~~p~~~G   93 (364)
                      .+|.+|+++++.  ++|++ ..+++. +.|.|.++++||+|++.+++||++|++...|...+..       ....+.++|
T Consensus         8 ~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G   86 (393)
T cd08246           8 VVPEKMYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGG   86 (393)
T ss_pred             cCchhhhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccc
Confidence            488999999885  34555 368888 9999999999999999999999999998877411100       011235889


Q ss_pred             cceeEEEEeecCCCCCCCCCCEEEEecCCC------------------------CCCCcceeEEeecCCccccCCCCCCh
Q 017901           94 RDISGEVAAVGASVRSLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVTH  149 (364)
Q Consensus        94 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~  149 (364)
                      ||++|+|+++|++++.+++||+|++.....                        ..+|+|++|+.++.+.++++|+++++
T Consensus        87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~  166 (393)
T cd08246          87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSW  166 (393)
T ss_pred             cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCH
Confidence            999999999999999999999999875210                        12599999999999999999999999


Q ss_pred             hhhccccchHHHHHHHHHHh--cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCC
Q 017901          150 ADASAIPFAALTAWRALKCA--ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYS  226 (364)
Q Consensus       150 ~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~  226 (364)
                      .+++.+++.+.|||+++...  +++++|++|+|+|+.|.+|++++++|+.+|++++++++++++ +.++++|++++++++
T Consensus       167 ~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~  246 (393)
T cd08246         167 EEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRR  246 (393)
T ss_pred             HHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence            99999999999999998544  678999999999988999999999999999998888776554 788899999888864


Q ss_pred             Ch----------------------hHHHHhc----C--CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhcc
Q 017901          227 SK----------------------DIELAIK----G--KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHY  278 (364)
Q Consensus       227 ~~----------------------~~~~~i~----g--~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  278 (364)
                      ..                      .+.+.+.    +  .+|++|||+|+. .+..++++++++|+++.+|....      
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~------  319 (393)
T cd08246         247 DFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTTG------  319 (393)
T ss_pred             ccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccCC------
Confidence            32                      1223332    2  399999999986 88999999999999999986411      


Q ss_pred             ccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcC-CCCC
Q 017901          279 GLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKR-LIPG  357 (364)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~-~~~g  357 (364)
                           ...      ......+..++.++.+.+.. ..+.+..++++++++.+.+.+++.|+++|+++|++.+.++ +..|
T Consensus       320 -----~~~------~~~~~~l~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~g  387 (393)
T cd08246         320 -----YNH------TYDNRYLWMRQKRIQGSHFA-NDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVG  387 (393)
T ss_pred             -----CCC------CCcHHHHhhheeEEEecccC-cHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccc
Confidence                 000      01111345667777776654 4567889999999999988788999999999999999998 7889


Q ss_pred             eEEEE
Q 017901          358 KVVLE  362 (364)
Q Consensus       358 kvvi~  362 (364)
                      |+++-
T Consensus       388 kvvv~  392 (393)
T cd08246         388 NMAVL  392 (393)
T ss_pred             eEEEe
Confidence            98863

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=4.3e-38  Score=292.75  Aligned_cols=312  Identities=25%  Similarity=0.327  Sum_probs=254.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc---------ccCCCCCcccccceeEE
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS---------IFEPLLPLILGRDISGE   99 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---------~~~~~~p~~~G~e~~G~   99 (364)
                      |||+++..++.+  ++++ +.|.|++.++||+||+.++++|++|++.+.|.++.         .....+|.++|+|++|+
T Consensus         1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~   77 (350)
T cd08240           1 MKAAAVVEPGKP--LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE   77 (350)
T ss_pred             CeeEEeccCCCC--ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence            789999877765  7888 99999999999999999999999999999885421         00124567899999999


Q ss_pred             EEeecCCCCCCCCCCEEEEecCCC-----------------------CCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901          100 VAAVGASVRSLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (364)
Q Consensus       100 V~~vG~~~~~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (364)
                      |+++|++++.+++||+|+++....                       ...|+|++|+.++.+.++++|+++++.+++.+.
T Consensus        78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~  157 (350)
T cd08240          78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA  157 (350)
T ss_pred             EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence            999999999999999999863210                       135899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh
Q 017901          157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI  234 (364)
Q Consensus       157 ~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i  234 (364)
                      +.++|||+++.....+.++++|+|+| +|.+|++++|+|+..|+ +|+++.+++++ +.+.++|++.+++++..++.+.+
T Consensus       158 ~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  236 (350)
T cd08240         158 CSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRI  236 (350)
T ss_pred             chhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHH
Confidence            99999999997766677899999997 79999999999999999 68888666554 77889999888887665544433


Q ss_pred             c----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901          235 K----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY  310 (364)
Q Consensus       235 ~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (364)
                      .    +++|++||++|+...+..++++|+++|+++.+|....           ....   .+    .....+++++.+.+
T Consensus       237 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-----------~~~~---~~----~~~~~~~~~i~~~~  298 (350)
T cd08240         237 IKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGG-----------EATL---PL----PLLPLRALTIQGSY  298 (350)
T ss_pred             HHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCC-----------CCcc---cH----HHHhhcCcEEEEcc
Confidence            3    2499999999976689999999999999999986511           0000   11    12334777887776


Q ss_pred             eccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          311 MRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       311 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .. ..+++..++++++++.+++...+.|+++++++|++.+.+++..||+++++
T Consensus       299 ~~-~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         299 VG-SLEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             cC-CHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            54 45788999999999999877778999999999999999999889999864

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=3.5e-38  Score=297.89  Aligned_cols=320  Identities=25%  Similarity=0.337  Sum_probs=255.8

Q ss_pred             ccccceeeEEecc--cCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccc-------cCCCCC-ccc
Q 017901           24 LVTTSCRAVVLPR--FGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-------FEPLLP-LIL   92 (364)
Q Consensus        24 ~~~~~~~a~~~~~--~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-------~~~~~p-~~~   92 (364)
                      .+|++|||+++..  ++++ +.+++. +.|.|.|.++||+|+++++++|++|++...+....+       .+...| .++
T Consensus         3 ~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~   81 (398)
T TIGR01751         3 VVPETMYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII   81 (398)
T ss_pred             ccchhhhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence            4678999999965  6766 679999 999999999999999999999999988776532110       001223 379


Q ss_pred             ccceeEEEEeecCCCCCCCCCCEEEEecCCC------------------------CCCCcceeEEeecCCccccCCCCCC
Q 017901           93 GRDISGEVAAVGASVRSLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVT  148 (364)
Q Consensus        93 G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~  148 (364)
                      |||++|+|+++|++++.+++||+|++.....                        ...|+|++|+.++.+.++++|++++
T Consensus        82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~  161 (398)
T TIGR01751        82 GSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLT  161 (398)
T ss_pred             ccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCC
Confidence            9999999999999999999999999864210                        1258999999999999999999999


Q ss_pred             hhhhccccchHHHHHHHHHH--hcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          149 HADASAIPFAALTAWRALKC--AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       149 ~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      +++++.+...+.+||+++..  ...+.+|++++|+|++|.+|++++++|+.+|++++++++++++ +.++++|++.++|+
T Consensus       162 ~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~  241 (398)
T TIGR01751       162 WEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDR  241 (398)
T ss_pred             HHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecC
Confidence            99999999999999999854  4678999999999988999999999999999998888665554 77888999999986


Q ss_pred             CChh----------------------HHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhcc
Q 017901          226 SSKD----------------------IELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHY  278 (364)
Q Consensus       226 ~~~~----------------------~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  278 (364)
                      +..+                      +.+.+.     +.+|++|||+|+. .+..++++++++|+++.+|....      
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~------  314 (398)
T TIGR01751       242 NDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTG------  314 (398)
T ss_pred             CCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccC------
Confidence            5421                      222222     2399999999986 88999999999999999987511      


Q ss_pred             ccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCe
Q 017901          279 GLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGK  358 (364)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gk  358 (364)
                           ...      ..+...+..++..+.+.... ..+++++++++++++.+.+.+++.|+++++++||+.+.+++..||
T Consensus       315 -----~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk  382 (398)
T TIGR01751       315 -----YNH------DYDNRYLWMRQKRIQGSHFA-NLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGN  382 (398)
T ss_pred             -----CCC------CcCHHHHhhcccEEEccccC-cHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCce
Confidence                 000      00111234556666665543 345678899999999999888899999999999999999999999


Q ss_pred             EEEEc
Q 017901          359 VVLEF  363 (364)
Q Consensus       359 vvi~~  363 (364)
                      +|+++
T Consensus       383 vvv~~  387 (398)
T TIGR01751       383 VAVLV  387 (398)
T ss_pred             EEEEe
Confidence            99976

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=6.8e-38  Score=290.15  Aligned_cols=306  Identities=18%  Similarity=0.244  Sum_probs=244.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+   ++.++++ +.+.|.|.++||+||+.++++|++|++.+.|..+.   .++|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~---~~~~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~   73 (339)
T PRK10083          1 MKSIVIEK---PNSLAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVD   73 (339)
T ss_pred             CeEEEEec---CCeeEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCc
Confidence            68899985   4468999 99999999999999999999999999999886432   24688999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .+++||+|+.....                       ...+|+|++|+.++.+.++++|+++++.+++ +...+.++|++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~  152 (339)
T PRK10083         74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV  152 (339)
T ss_pred             cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence            99999999853110                       0125899999999999999999999998876 55667788865


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHH-cCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--C-Ccc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA-SGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--G-KFD  239 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~-~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--g-~~D  239 (364)
                      . ...++++|++|+|+| +|.+|++++|+|+. +|++ ++++.+++++ +.++++|+++++++...++.+.+.  + .+|
T Consensus       153 ~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d  230 (339)
T PRK10083        153 T-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPT  230 (339)
T ss_pred             H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCC
Confidence            4 678999999999999 79999999999996 6996 5555555544 778999999999887666666654  2 157


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE  319 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (364)
                      ++|||+|++..+..++++++++|+++.+|....            +..   .   .......+++++.+...  ..+.+.
T Consensus       231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~~---~---~~~~~~~~~~~~~~~~~--~~~~~~  290 (339)
T PRK10083        231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSE------------PSE---I---VQQGITGKELSIFSSRL--NANKFP  290 (339)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------------Cce---e---cHHHHhhcceEEEEEec--ChhhHH
Confidence            999999976689999999999999999986510            110   0   00112246666666553  356789


Q ss_pred             HHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCC-CCCeEEEEcC
Q 017901          320 EIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRL-IPGKVVLEFD  364 (364)
Q Consensus       320 ~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~-~~gkvvi~~~  364 (364)
                      +++++++++.+.+  .+++.|+++++++|++.+.++. ..+|+++++.
T Consensus       291 ~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~  338 (339)
T PRK10083        291 VVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA  338 (339)
T ss_pred             HHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence            9999999999987  4789999999999999998654 5589999864

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6.7e-38  Score=290.46  Aligned_cols=311  Identities=29%  Similarity=0.403  Sum_probs=257.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++..++ +..++++ +.+.|.|.++|++|++.++++|++|+..+.|..+..  ...|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~-~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~   76 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVS   76 (341)
T ss_pred             CceEEeeccC-CCCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCC
Confidence            7899998776 5578999 999999999999999999999999999988865321  24567899999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      .+++||+|+....                        .....|+|++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~  156 (341)
T cd08297          77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK  156 (341)
T ss_pred             CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence            9999999997521                        0012589999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCc
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKF  238 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~  238 (364)
                      ++.. .+++++++++|+|+++.+|++++++|+.+|++|+++.+++++ +.+.++|+++++++...++.+.+.     +.+
T Consensus       157 ~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~v  235 (341)
T cd08297         157 ALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA  235 (341)
T ss_pred             HHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCC
Confidence            9854 689999999999988889999999999999999999877655 777889999999887665554443     239


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHH
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL  318 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (364)
                      |++|||.++...+..++++++++|+++.+|....            ..     .+.....+..+++++.+.... ..+.+
T Consensus       236 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~------------~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~  297 (341)
T cd08297         236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG------------GF-----IPLDPFDLVLRGITIVGSLVG-TRQDL  297 (341)
T ss_pred             CEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC------------CC-----CCCCHHHHHhcccEEEEeccC-CHHHH
Confidence            9999988876688999999999999999986511            00     011112345678888776543 46889


Q ss_pred             HHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          319 EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       319 ~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++++++++.+.+.+ +.|+++++++|++.+.++...||+++++
T Consensus       298 ~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         298 QEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            9999999999987644 6799999999999999999899999975

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.7e-38  Score=293.19  Aligned_cols=310  Identities=30%  Similarity=0.439  Sum_probs=254.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++.+  ++++ +.|.|.+.++||+|++.++++|++|+....|..+.    .+|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~----~~p~~~g~e~~G~v~~vG~~~~   73 (367)
T cd08263           1 MKAAVLKGPNPP--LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF----PPPFVLGHEISGEVVEVGPNVE   73 (367)
T ss_pred             CeeEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC----CCCcccccccceEEEEeCCCCC
Confidence            789999987654  7888 89999999999999999999999999998886432    5678999999999999999998


Q ss_pred             C---CCCCCEEEEecCC---------------------------------------------CCCCCcceeEEeecCCcc
Q 017901          109 S---LTVGQEVFGALHP---------------------------------------------TAVRGTYADYAVLSEDEL  140 (364)
Q Consensus       109 ~---~~~Gd~V~~~~~~---------------------------------------------~~~~g~~~~~~~~~~~~~  140 (364)
                      +   |++||+|++....                                             ....|+|++|+.++.+.+
T Consensus        74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  153 (367)
T cd08263          74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL  153 (367)
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence            8   9999999983210                                             013589999999999999


Q ss_pred             ccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcC
Q 017901          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAG  218 (364)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g  218 (364)
                      +++|+++++.+++.++.+++|||+++...+.+.++++++|+| +|.+|++++++|+.+|++ ++++.+++++ +.++++|
T Consensus       154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g  232 (367)
T cd08263         154 APLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELG  232 (367)
T ss_pred             EECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence            999999999999999999999999997778889999999996 799999999999999998 8877665554 7778899


Q ss_pred             CceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHH
Q 017901          219 AEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (364)
Q Consensus       219 ~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (364)
                      ++.+++++..++.+.+.     ..+|++|||+|+......++++++++|+++.+|....           ...     ..
T Consensus       233 ~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~-----~~  296 (367)
T cd08263         233 ATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG-----------GAT-----AE  296 (367)
T ss_pred             CceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC-----------CCc-----cc
Confidence            99999887766554443     2399999999986578899999999999999986411           000     00


Q ss_pred             HhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          294 KRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .....+..+++++.+++.....+.++.+++++.++.+++.  +++.|+++++++|++.+.+++..||+|++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         297 IPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             cCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            1111233567777775433235788999999999998863  67899999999999999999988999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=9.6e-38  Score=287.72  Aligned_cols=317  Identities=26%  Similarity=0.385  Sum_probs=253.5

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +|+++.+.++|++..+.++ +.+.|.|.++||+||+.++|+|++|++...|.++.   ..+|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v   76 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGV   76 (327)
T ss_pred             CceEEEEeccCChhHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCC
Confidence            5899999999999999999 99999999999999999999999999998886432   2357789999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      +.+++||+|++...   ..|+|++|+.++.+.++++|+++++.+++.++..+.+||+++...+.+++|++++|+|++|.+
T Consensus        77 ~~~~~Gd~V~~~~~---~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~i  153 (327)
T PRK10754         77 KHIKVGDRVVYAQS---ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGV  153 (327)
T ss_pred             CCCCCCCEEEECCC---CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHH
Confidence            99999999987543   248999999999999999999999999999988999999998777889999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      |++++++|+.+|++|+++.+++.+ +.++++|++++++....++.+.+.     +.+|++|||+|+. ....++++++++
T Consensus       154 g~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~  232 (327)
T PRK10754        154 GLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR  232 (327)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC
Confidence            999999999999999999876655 778899998888877666555443     1399999999986 888999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCceec--ccee
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKIP--VDKT  337 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~~--~~~~  337 (364)
                      |+++.+|....          .........+. ...........+.+...+.  ..+.+..+++++.+|.+++.  ..+.
T Consensus       233 g~~v~~g~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~  301 (327)
T PRK10754        233 GLMVSFGNASG----------PVTGVNLGILN-QKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQK  301 (327)
T ss_pred             CEEEEEccCCC----------CCCCcCHHHHh-ccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcE
Confidence            99999986511          00000000100 0000111111222222111  12345678999999999853  5789


Q ss_pred             eccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          338 FHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       338 ~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      |+++++++|++.+.+++..+|+|+..
T Consensus       302 ~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        302 FPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             EcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            99999999999999999999999863

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-37  Score=288.41  Aligned_cols=305  Identities=24%  Similarity=0.279  Sum_probs=252.3

Q ss_pred             eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~  109 (364)
                      |+++.+..+  .++++. +.+.|+|.++||+||+.++++|++|++.+.|...   ...+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~--~~~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~   74 (337)
T cd05283           1 KGYAARDAS--GKLEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTK   74 (337)
T ss_pred             CceEEecCC--CCceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcc
Confidence            456666555  468999 9999999999999999999999999999988642   2356889999999999999999999


Q ss_pred             CCCCCEEEEec-C------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccch
Q 017901          110 LTVGQEVFGAL-H------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA  158 (364)
Q Consensus       110 ~~~Gd~V~~~~-~------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  158 (364)
                      |++||+|+... .                              .....|+|++|+.++.+.++++|+++++.+++.+.+.
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~  154 (337)
T cd05283          75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA  154 (337)
T ss_pred             cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence            99999997321 0                              0023589999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCC
Q 017901          159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGK  237 (364)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~  237 (364)
                      +.+||+++. ...+++|++++|.| .|.+|++++++|+.+|++++++.+++++ +.++++|++.+++....++.....+.
T Consensus       155 ~~ta~~~~~-~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~  232 (337)
T cd05283         155 GITVYSPLK-RNGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS  232 (337)
T ss_pred             HHHHHHHHH-hcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCC
Confidence            999999984 45689999999977 7999999999999999999999776554 77889999988887665544433333


Q ss_pred             ccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG  317 (364)
Q Consensus       238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (364)
                      +|++|||+|+...+..++++++++|+++.+|....            ..      .++...++.+++++.+.+.. ..++
T Consensus       233 ~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~~~~~~~i~~~~~~-~~~~  293 (337)
T cd05283         233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE------------PL------PVPPFPLIFGRKSVAGSLIG-GRKE  293 (337)
T ss_pred             ceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC------------CC------ccCHHHHhcCceEEEEeccc-CHHH
Confidence            99999999987458999999999999999986511            10      11112345688889888765 5778


Q ss_pred             HHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          318 LEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       318 ~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ++.+++++.++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus       294 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         294 TQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            99999999999988754 689999999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=286.39  Aligned_cols=312  Identities=29%  Similarity=0.390  Sum_probs=254.8

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      ||||+++.+++....+.+. +.+.|.+.++||+||+.++++|+.|+....|..+.  ....|.++|+|++|+|+++|+++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v   77 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDV   77 (334)
T ss_pred             CcEEEEEEecCCCcceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCC
Confidence            6999999988887778888 88888899999999999999999999998885432  22456789999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      +.+++||+|+++..    +|+|++|+.++.++++++|++++..+++.+++++.+||+++.+.+.+++|++++|+|++|.+
T Consensus        78 ~~~~~Gd~V~~~~~----~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~  153 (334)
T PTZ00354         78 KRFKEGDRVMALLP----GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGV  153 (334)
T ss_pred             CCCCCCCEEEEecC----CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence            99999999998743    48999999999999999999999999999999999999998777899999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChh-HHHHhc-----CCccEEEECCCCchhHHHHHhhccC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD-IELAIK-----GKFDAVLDTIGAPETERLGLNFLKR  260 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~-~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~  260 (364)
                      |++++++|+.+|++++.+.+++++ +.+.++|++.++++...+ +...+.     ..+|++|||+|+. .+..+++++++
T Consensus       154 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~  232 (334)
T PTZ00354        154 GTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAV  232 (334)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhcc
Confidence            999999999999998877666554 777889998888876544 444433     1399999999986 88999999999


Q ss_pred             CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC---------HHHHHHHHHHHHcCCce
Q 017901          261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD---------AEGLEEIRRLSETGKLK  331 (364)
Q Consensus       261 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~i~  331 (364)
                      +|+++.+|....           ....   .  ++...+..++.++.+......         ...++.++++++++.+.
T Consensus       233 ~g~~i~~~~~~~-----------~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  296 (334)
T PTZ00354        233 DGKWIVYGFMGG-----------AKVE---K--FNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIK  296 (334)
T ss_pred             CCeEEEEecCCC-----------Cccc---c--cCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCcc
Confidence            999999985411           0100   0  111123344555555443210         13457788999999998


Q ss_pred             eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          332 IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       332 ~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +.+.+.|++++++++++.+.+++..+|+|+++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        297 PIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             CccccEEcHHHHHHHHHHHHhCCCCceEEEec
Confidence            87888999999999999999888889999876

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=2.2e-37  Score=286.66  Aligned_cols=306  Identities=22%  Similarity=0.280  Sum_probs=247.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++++++...  .++ +.|.|.+.++||+||+.++++|++|+..+.|..+.    ..|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~~~~--~~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~----~~~~~~g~e~~G~V~~~G~~v~   73 (338)
T PRK09422          1 MKAAVVNKDHTGD--VVV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD----KTGRILGHEGIGIVKEVGPGVT   73 (338)
T ss_pred             CeEEEecCCCCCc--eEE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC----CCCccCCcccceEEEEECCCCc
Confidence            7899999877652  277 88999999999999999999999999998886432    3467899999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      .|++||+|++...                        ....+|+|++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~  153 (338)
T PRK09422         74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK  153 (338)
T ss_pred             cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence            9999999986211                        0012689999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc---CCc
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK---GKF  238 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~---g~~  238 (364)
                      ++ ..+.+++|++|+|+| +|.+|++++++|+. .|++|+++.+++++ +.++++|++.+++++. .++.+.+.   +.+
T Consensus       154 ~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~  231 (338)
T PRK09422        154 AI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGA  231 (338)
T ss_pred             HH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCC
Confidence            98 778999999999999 79999999999998 49999999776655 7889999998888754 34444443   338


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHH
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL  318 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (364)
                      |.++++.++...+..++++++++|+++.+|....            ..      .+.......++..+.++... ..+.+
T Consensus       232 d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~~~~~~~~~~~~~~-~~~~~  292 (338)
T PRK09422        232 HAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------------SM------DLSIPRLVLDGIEVVGSLVG-TRQDL  292 (338)
T ss_pred             cEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------------Cc------eecHHHHhhcCcEEEEecCC-CHHHH
Confidence            8555555555589999999999999999986410            00      01111344456667665533 46788


Q ss_pred             HHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          319 EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       319 ~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +.++++++++.+.+.+. .++++++++||+.+.++...||+++++
T Consensus       293 ~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        293 EEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             HHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEec
Confidence            99999999999876554 689999999999999999999999875

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=3e-37  Score=263.63  Aligned_cols=298  Identities=21%  Similarity=0.276  Sum_probs=244.1

Q ss_pred             ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee--cCCCCCCCCCCEEEE
Q 017901           41 EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV--GASVRSLTVGQEVFG  118 (364)
Q Consensus        41 ~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v--G~~~~~~~~Gd~V~~  118 (364)
                      +.++++ +.++|+|+++|||||++|.+++|..+..++..    ..--.|+-+|-..+|.++..  -|+.++|++||.|.+
T Consensus        25 d~F~le-e~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~----~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~   99 (340)
T COG2130          25 DDFRLE-EVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDA----PSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG   99 (340)
T ss_pred             CCceeE-eccCCCCCcCceEEEEEEeccCHHHeecccCC----cccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence            679999 99999999999999999999999544333332    22245777787776644432  266788999999999


Q ss_pred             ecCCCCCCCcceeEEeecCCccccCCCCCCh--hhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHH
Q 017901          119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTH--ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSV  196 (364)
Q Consensus       119 ~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~--~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~  196 (364)
                      .       .+|++|..++.+.+.|+++..-+  .....+..++.|||.+|.+.+..++|++|+|.+|+|.+|..+.|+||
T Consensus       100 ~-------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAK  172 (340)
T COG2130         100 V-------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAK  172 (340)
T ss_pred             c-------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHH
Confidence            7       57999999999999999864221  22345567889999999999999999999999999999999999999


Q ss_pred             HcCCeEEEeeCCccH-HHHHH-cCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          197 ASGCHVSATCGSKSI-DRVLA-AGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       197 ~~g~~vi~~~~~~~~-~~~~~-~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ..|++|++++.++++ +++.+ +|+|.++||+++++.+.++     | +|++||++|++ .++..+..|+..+|++.||.
T Consensus       173 lkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~G-IDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~  250 (340)
T COG2130         173 LKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKG-IDVYFENVGGE-VLDAVLPLLNLFARIPVCGA  250 (340)
T ss_pred             hhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCC-eEEEEEcCCch-HHHHHHHhhccccceeeeee
Confidence            999999999998887 77766 9999999999999988887     6 99999999999 99999999999999999997


Q ss_pred             CchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceeccceeeccccHH
Q 017901          270 ETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIPVDKTFHMTQVR  344 (364)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~  344 (364)
                      ..     .|+-....+.      +..+..++.+.+++.|+....+     .+..+++..++++|+|+...+-.-.||.++
T Consensus       251 IS-----~YN~~~~~~g------p~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP  319 (340)
T COG2130         251 IS-----QYNAPELPPG------PRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAP  319 (340)
T ss_pred             hh-----hcCCCCCCCC------cchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccH
Confidence            62     2433222111      1222246667888888876221     367889999999999999888778899999


Q ss_pred             HHHHHHhcCCCCCeEEEEc
Q 017901          345 EAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       345 eA~~~~~~~~~~gkvvi~~  363 (364)
                      +||.-+.+++..||.|+++
T Consensus       320 ~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         320 EAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             HHHHHHhcCCccceEEEEe
Confidence            9999999999999999986

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=7.6e-37  Score=284.38  Aligned_cols=330  Identities=39%  Similarity=0.699  Sum_probs=252.7

Q ss_pred             eeeEEecccCCCc-eEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCcc------------ccCCCCCccccc
Q 017901           29 CRAVVLPRFGGPE-VLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRS------------IFEPLLPLILGR   94 (364)
Q Consensus        29 ~~a~~~~~~g~~~-~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~------------~~~~~~p~~~G~   94 (364)
                      |||+++.++++++ .+.++ +.+.|.| .++||+|+++++++|++|+....|....            +.....|.++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~   79 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR   79 (350)
T ss_pred             CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence            7899998887753 47888 9999999 4999999999999999999998874210            002356889999


Q ss_pred             ceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCC
Q 017901           95 DISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE  174 (364)
Q Consensus        95 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  174 (364)
                      |++|+|+++|+++++|++||+|+++.... ..|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.+.+.+.+
T Consensus        80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~-~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  158 (350)
T cd08248          80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPW-SQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNP  158 (350)
T ss_pred             eeEEEEEecCCCcccCCCCCEEEEecCCC-CCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCC
Confidence            99999999999999999999999875321 35999999999999999999999999999999999999999877777754


Q ss_pred             ----CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc--CCccEEEECCCCc
Q 017901          175 ----GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAP  248 (364)
Q Consensus       175 ----g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~g~~  248 (364)
                          |++++|+|++|.+|++++++|+.+|++|+++.++++.+.++++|.+.+++....++...+.  +.+|++|||+|+.
T Consensus       159 ~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~  238 (350)
T cd08248         159 KNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGD  238 (350)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChH
Confidence                9999999999999999999999999999998876555778899998888876655555444  2399999999998


Q ss_pred             hhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcC
Q 017901          249 ETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETG  328 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  328 (364)
                       ....++++++++|+++.+|.........++...................+. +...+.+.......+.+.++++++.++
T Consensus       239 -~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g  316 (350)
T cd08248         239 -TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLL-KGSHYRWGFFSPSGSALDELAKLVEDG  316 (350)
T ss_pred             -HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHh-cCCCeeEEEECCCHHHHHHHHHHHhCC
Confidence             899999999999999999854210000000000000000000000100111 111111222222467899999999999


Q ss_pred             CceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          329 KLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       329 ~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .+.+.+++.|+++++++|++.+.+++..+|++++
T Consensus       317 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         317 KIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             CEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            9988888999999999999999988887898864

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3e-37  Score=281.60  Aligned_cols=299  Identities=28%  Similarity=0.373  Sum_probs=246.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++...+ +..++++ +.+.|.+.++||+||+.++++|++|++...+.       ..|.++|||++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-------~~~~~~g~e~~G~v~~~G~~v~   71 (305)
T cd08270           1 MRALVVDPDA-PLRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER-------PDGAVPGWDAAGVVERAAADGS   71 (305)
T ss_pred             CeEEEEccCC-CceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-------CCCCcccceeEEEEEEeCCCCC
Confidence            6889998765 7788998 99999999999999999999999999876532       2356899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      .|++||+|+++..    .|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++...... +|++++|+|+.|.+|
T Consensus        72 ~~~~Gd~V~~~~~----~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g  146 (305)
T cd08270          72 GPAVGARVVGLGA----MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVG  146 (305)
T ss_pred             CCCCCCEEEEecC----CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHH
Confidence            9999999999852    48999999999999999999999999999999999999998665544 599999999889999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901          189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~  267 (364)
                      ++++++|+..|++|+++++++++ +.++++|++.+++... ++..  .+ +|+++||+|+. .+..++++++++|+++.+
T Consensus       147 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~--~~-~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~  221 (305)
T cd08270         147 RFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-ELSG--AP-VDLVVDSVGGP-QLARALELLAPGGTVVSV  221 (305)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-cccC--CC-ceEEEECCCcH-HHHHHHHHhcCCCEEEEE
Confidence            99999999999999999876654 7788899876654322 1111  24 99999999997 889999999999999999


Q ss_pred             ccCchhhhhccccccccchhhHHHHHHhhhhhh--ccceeEEEEEecc---CHHHHHHHHHHHHcCCceeccceeecccc
Q 017901          268 HGETAALADHYGLALGLPIATTVLLKKRMQTWY--SYGIDYSYIYMRA---DAEGLEEIRRLSETGKLKIPVDKTFHMTQ  342 (364)
Q Consensus       268 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~i~~~~~~~~~l~~  342 (364)
                      |....           ...    .  .....+.  .++.++.+++...   ..+.+..++++++++++.+.+.+.+++++
T Consensus       222 g~~~~-----------~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  284 (305)
T cd08270         222 GSSSG-----------EPA----V--FNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTE  284 (305)
T ss_pred             eccCC-----------Ccc----c--ccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHH
Confidence            86410           000    0  0011122  2577777776531   24678889999999999987888999999


Q ss_pred             HHHHHHHHhcCCCCCeEEEEc
Q 017901          343 VREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       343 ~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++|++.+.++...||+|+++
T Consensus       285 ~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         285 IDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999999989999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=4.9e-37  Score=287.40  Aligned_cols=310  Identities=21%  Similarity=0.266  Sum_probs=245.6

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +||++++...++.  ++++ +.|.|.+.++||+||++++|+|++|++.+.|..+    ..+|+++|||++|+|+++|+++
T Consensus         7 ~~~a~~~~~~~~~--~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v   79 (373)
T cd08299           7 KCKAAVLWEPKKP--FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV----TPFPVILGHEAAGIVESVGEGV   79 (373)
T ss_pred             eeEEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC----CCCCccccccceEEEEEeCCCC
Confidence            4888888876554  7888 9999999999999999999999999999988642    2568899999999999999999


Q ss_pred             CCCCCCCEEEEecCC--------------------------------------------CCCCCcceeEEeecCCccccC
Q 017901          108 RSLTVGQEVFGALHP--------------------------------------------TAVRGTYADYAVLSEDELTPK  143 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~i  143 (364)
                      +.+++||+|+.+...                                            ....|+|++|++++.+.++++
T Consensus        80 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~l  159 (373)
T cd08299          80 TTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKI  159 (373)
T ss_pred             ccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeC
Confidence            999999999875210                                            002589999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCce
Q 017901          144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQ  221 (364)
Q Consensus       144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~  221 (364)
                      |+++++++++.+.+++.+||+++...+++++|++|+|+| +|.+|++++++|+.+|+ +|+++.+++++ +.++++|+++
T Consensus       160 P~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~  238 (373)
T cd08299         160 DAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATE  238 (373)
T ss_pred             CCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce
Confidence            999999999999999999999987788999999999997 79999999999999999 79998766554 7889999999


Q ss_pred             eeeCCChh--HHHHhc----CCccEEEECCCCchhHHHHHhhc-cCCCEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901          222 AVDYSSKD--IELAIK----GKFDAVLDTIGAPETERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (364)
Q Consensus       222 v~~~~~~~--~~~~i~----g~~D~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (364)
                      +++..+.+  +...+.    +.+|+++||+|++..+..++..+ +++|+++.+|....            ..    .+.+
T Consensus       239 ~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~------------~~----~~~~  302 (373)
T cd08299         239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS------------SQ----NLSI  302 (373)
T ss_pred             EecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCC------------Cc----eeec
Confidence            98875432  333322    23999999999865777767765 57999999986511            00    0011


Q ss_pred             hhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          295 RMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .. ..+.++.++.+++...  +++++.++++.+.++.++  +.+++.|+++|+++||+.+.+++. .|+++++
T Consensus       303 ~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         303 NP-MLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             CH-HHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            11 1233566777776532  246677777777777554  457899999999999999987765 5888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=285.69  Aligned_cols=307  Identities=26%  Similarity=0.383  Sum_probs=251.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |+|+++.+++.+  +++. +.|.|.+.++|++|++.++++|++|++...|..+   ...+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~g~~~~   74 (334)
T PRK13771          1 MKAVILPGFKQG--YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP---RMKYPVILGHEVVGTVEEVGENVK   74 (334)
T ss_pred             CeeEEEcCCCCC--cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC---CCCCCeeccccceEEEEEeCCCCc
Confidence            789999977764  8888 9999999999999999999999999998888643   224577899999999999999998


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .+++||+|++....                       ....|+|++|+.++.+.++++|+++++.+++.+++.+.+||++
T Consensus        75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~  154 (334)
T PRK13771         75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG  154 (334)
T ss_pred             cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence            89999999987410                       0125899999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--CCccEEE
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--GKFDAVL  242 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vi  242 (364)
                      +... .++++++++|+|++|.+|++++++|+..|++++++++++++ +.++++ ++++++++  ++.+.+.  +++|+++
T Consensus       155 ~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~~~~d~~l  230 (334)
T PRK13771        155 LRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKIGGADIVI  230 (334)
T ss_pred             HHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhcCCCcEEE
Confidence            8654 89999999999988999999999999999999998776554 666777 66676654  3333332  2399999


Q ss_pred             ECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHH
Q 017901          243 DTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIR  322 (364)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (364)
                      ||+|+. ....++++++++|+++.+|....           ...     ....+.....+++++.+... ..++.++.++
T Consensus       231 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-----------~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  292 (334)
T PRK13771        231 ETVGTP-TLEESLRSLNMGGKIIQIGNVDP-----------SPT-----YSLRLGYIILKDIEIIGHIS-ATKRDVEEAL  292 (334)
T ss_pred             EcCChH-HHHHHHHHHhcCCEEEEEeccCC-----------CCC-----cccCHHHHHhcccEEEEecC-CCHHHHHHHH
Confidence            999997 78999999999999999986511           000     00011122456777777643 2578899999


Q ss_pred             HHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          323 RLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       323 ~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++.++.+++.+++.|+++++++|++.+.++...||++++.
T Consensus       293 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        293 KLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            99999999877889999999999999999888889999875

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.1e-37  Score=284.49  Aligned_cols=311  Identities=26%  Similarity=0.344  Sum_probs=256.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++.+  +++. +.+.|.+.+++|+|++.++++|++|+....|..+.   ..+|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~   74 (345)
T cd08260           1 MRAAVYEEFGEP--LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVS   74 (345)
T ss_pred             CeeEEEecCCCC--cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCc
Confidence            799999987766  8888 89999999999999999999999999999886432   34578999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhccccchHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAALTAW  163 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~  163 (364)
                      .|++||+|++....                       ...+|+|++|++++..  .++++|++++..+++.++..++|||
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~  154 (345)
T cd08260          75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF  154 (345)
T ss_pred             cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence            99999999872100                       0126899999999974  8999999999999999999999999


Q ss_pred             HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc----CC
Q 017901          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK----GK  237 (364)
Q Consensus       164 ~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~----g~  237 (364)
                      +++.+.+++.++++++|+| +|.+|++++++|+..|++|+++.+++++ +.++++|++++++++. .++...+.    +.
T Consensus       155 ~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~  233 (345)
T cd08260         155 RALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGG  233 (345)
T ss_pred             HHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCC
Confidence            9987778899999999999 7999999999999999999999776554 7788899999998877 56555443    24


Q ss_pred             ccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG  317 (364)
Q Consensus       238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (364)
                      +|++|||+|+...+..++++++++|+++.+|....           ...    .....+..+..+++++.+.... ..+.
T Consensus       234 ~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~  297 (345)
T cd08260         234 AHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLG-----------EEA----GVALPMDRVVARELEIVGSHGM-PAHR  297 (345)
T ss_pred             CCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCC-----------CCC----ccccCHHHHhhcccEEEeCCcC-CHHH
Confidence            99999999975588899999999999999986511           000    0111112344667777776543 4678


Q ss_pred             HHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          318 LEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       318 ~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ++.++++++++++.+.  +++.|+++++++|++.+.++...||+|++
T Consensus       298 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         298 YDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             HHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            8999999999998763  67899999999999999999999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=5e-37  Score=284.58  Aligned_cols=310  Identities=24%  Similarity=0.317  Sum_probs=242.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++.+++  +.+++. +.|.|.|.++||+||+.++++|++|+.++.+.........+|+++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~--~~~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~   77 (341)
T PRK05396          1 MKALVKLKAE--PGLWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT   77 (341)
T ss_pred             CceEEEecCC--CceEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence            6899998766  458999 9999999999999999999999999998766321111224678999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .+++||+|++....                       ...+|+|++|++++.+.++++|+++++.+++.+ ..+.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~  156 (341)
T PRK05396         78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT  156 (341)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence            99999999986321                       013589999999999999999999999888754 455566665


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKF  238 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~  238 (364)
                      +..  ...+|++++|.| +|.+|++++|+|+.+|+ +++++.+++++ +.++++|++++++++..++.+.+.     +.+
T Consensus       157 ~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  233 (341)
T PRK05396        157 ALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGF  233 (341)
T ss_pred             HHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCC
Confidence            532  346899999987 79999999999999999 57777555544 778999999999887766655543     239


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHH
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL  318 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (364)
                      |++|||.|+...+..++++++++|+++.+|....            ..    .  +.+..+..+++++.++........+
T Consensus       234 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~----~--~~~~~~~~~~~~l~~~~~~~~~~~~  295 (341)
T PRK05396        234 DVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG------------DM----A--IDWNKVIFKGLTIKGIYGREMFETW  295 (341)
T ss_pred             CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------------CC----c--ccHHHHhhcceEEEEEEccCccchH
Confidence            9999999987688999999999999999986510            00    0  1112455667777776533223456


Q ss_pred             HHHHHHHHcC-CceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          319 EEIRRLSETG-KLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       319 ~~~~~~~~~g-~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ..+++++.++ ++.+.+.+.|+++++++||+.+.++. .||++++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        296 YKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             HHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            6788888888 45556788999999999999998887 799999885

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=3.6e-37  Score=289.75  Aligned_cols=308  Identities=22%  Similarity=0.254  Sum_probs=249.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      |+|+++.   +++.+++. +.+.|.| .+++|+||+.++++|++|+..+.|.++.   .++|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~---~~~~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v   73 (386)
T cd08283           1 MKALVWH---GKGDVRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEV   73 (386)
T ss_pred             CeeEEEe---cCCCceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCC
Confidence            7899998   44568999 9999988 4999999999999999999999997543   2468899999999999999999


Q ss_pred             CCCCCCCEEEEecCCC-------------------------------------------CCCCcceeEEeecCC--cccc
Q 017901          108 RSLTVGQEVFGALHPT-------------------------------------------AVRGTYADYAVLSED--ELTP  142 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~--~~~~  142 (364)
                      +++++||+|++.....                                           +.+|+|++|++++.+  .+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~  153 (386)
T cd08283          74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK  153 (386)
T ss_pred             CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence            9999999998854100                                           125899999999988  8999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCc
Q 017901          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAE  220 (364)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~  220 (364)
                      +|+++++.+++.++..++|||+++ ..+++.+|++|+|+| +|.+|++++++|+..|+ +|+++.+++++ +.+++++..
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~  231 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGA  231 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc
Confidence            999999999999999999999998 788999999999997 79999999999999998 58888776655 778888444


Q ss_pred             eeeeCCCh-hHHHHhc----C-CccEEEECCCCc---------------------hhHHHHHhhccCCCEEEEEccCchh
Q 017901          221 QAVDYSSK-DIELAIK----G-KFDAVLDTIGAP---------------------ETERLGLNFLKRGGHYMTLHGETAA  273 (364)
Q Consensus       221 ~v~~~~~~-~~~~~i~----g-~~D~vid~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~~  273 (364)
                      .++++... ++.+.+.    + .+|++|||+|+.                     ..+..++++++++|+++.+|.... 
T Consensus       232 ~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~-  310 (386)
T cd08283         232 ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGG-  310 (386)
T ss_pred             EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCC-
Confidence            67776655 3555543    1 399999999853                     367889999999999999986511 


Q ss_pred             hhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHh
Q 017901          274 LADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKD  351 (364)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~  351 (364)
                                ...    .  ......+.+++++.+.... ..+.+..+++++.++++.+  .+++.|+++++++||+.+.
T Consensus       311 ----------~~~----~--~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~  373 (386)
T cd08283         311 ----------TVN----K--FPIGAAMNKGLTLRMGQTH-VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD  373 (386)
T ss_pred             ----------CcC----c--cCHHHHHhCCcEEEeccCC-chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH
Confidence                      000    0  0111345677777776533 3567899999999999986  3678999999999999998


Q ss_pred             cCC-CCCeEEEEc
Q 017901          352 KRL-IPGKVVLEF  363 (364)
Q Consensus       352 ~~~-~~gkvvi~~  363 (364)
                      ++. ..+|+||++
T Consensus       374 ~~~~~~~k~~~~~  386 (386)
T cd08283         374 KKEDGCIKVVLKP  386 (386)
T ss_pred             hCCCCeEEEEecC
Confidence            877 457999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=5.1e-37  Score=285.19  Aligned_cols=308  Identities=23%  Similarity=0.293  Sum_probs=249.8

Q ss_pred             eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      ||++++.+++   .+++. +.|.|.| .++||+||+.++++|++|++.+.|.++.   .++|.++|+|++|+|+++|+++
T Consensus         1 ~ka~~~~~~~---~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   73 (347)
T cd05278           1 MKALVYLGPG---KIGLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDV   73 (347)
T ss_pred             CceEEEecCC---ceEEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCc
Confidence            6889998544   47888 9999999 9999999999999999999999886543   3568899999999999999999


Q ss_pred             CCCCCCCEEEEecCCC--------------------------CCCCcceeEEeecCC--ccccCCCCCChhhhccccchH
Q 017901          108 RSLTVGQEVFGALHPT--------------------------AVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~--------------------------~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      +++++||+|++.....                          ..+|+|++|+.++.+  .++++|++++..+++.++.++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~  153 (347)
T cd05278          74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL  153 (347)
T ss_pred             cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence            9999999999832100                          235899999999987  899999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--  235 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--  235 (364)
                      +|||+++ ...++++|++|+|.| +|.+|++++|+|+.+|. +++++.+++.+ +.++++|++.+++++..++.+.+.  
T Consensus       154 ~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~  231 (347)
T cd05278         154 PTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL  231 (347)
T ss_pred             hheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence            9999998 678899999999976 69999999999999996 78888655544 677899999999887766655443  


Q ss_pred             ---CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec
Q 017901          236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR  312 (364)
Q Consensus       236 ---g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (364)
                         +.+|++|||+|+...+..++++|+++|+++.+|....           ....   .   .....+.+++++.+....
T Consensus       232 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~~---~---~~~~~~~~~~~~~~~~~~  294 (347)
T cd05278         232 TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGK-----------PDPL---P---LLGEWFGKNLTFKTGLVP  294 (347)
T ss_pred             cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCC-----------Cccc---C---ccchhhhceeEEEeeccC
Confidence               2399999999985488999999999999999985411           0100   0   000123566666665432


Q ss_pred             cCHHHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCC-CCeEEEEc
Q 017901          313 ADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLI-PGKVVLEF  363 (364)
Q Consensus       313 ~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~-~gkvvi~~  363 (364)
                       ..+.++.+++++.++.+.+.  +...|+++++++|++.+.+++. .+|+|+++
T Consensus       295 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         295 -VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             -chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence             36789999999999998863  5788999999999999988776 67998864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=3.2e-37  Score=285.51  Aligned_cols=310  Identities=30%  Similarity=0.403  Sum_probs=249.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |+|+++..++ +..++++ +.+.|.|+++||+|++.++++|++|+....+..    ....|.++|||++|+|+.+|++++
T Consensus         1 m~a~~~~~~~-~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~   74 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVT   74 (339)
T ss_pred             CceEEeccCC-CCccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcC
Confidence            7899999887 6779999 999999999999999999999999998875542    113567899999999999999999


Q ss_pred             CCCCCCEEEEecCC----CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhccc----------CC
Q 017901          109 SLTVGQEVFGALHP----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM----------SE  174 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~  174 (364)
                      .+++||+|+++...    ...+|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.+..++          .+
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~  154 (339)
T cd08249          75 RFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASK  154 (339)
T ss_pred             cCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCC
Confidence            99999999997531    11358999999999999999999999999999999999999998666544          78


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchh
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~  250 (364)
                      +++++|+|++|.+|++++++|+.+|++|++++++++.+.++++|+++++++...++.+.+.    +++|++||++|++..
T Consensus       155 ~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~  234 (339)
T cd08249         155 GKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPES  234 (339)
T ss_pred             CCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchH
Confidence            9999999988999999999999999999998866566888999999999887766655553    339999999998448


Q ss_pred             HHHHHhhccC--CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE------eccCHHHHHHHH
Q 017901          251 ERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY------MRADAEGLEEIR  322 (364)
Q Consensus       251 ~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~  322 (364)
                      +..+++++++  +|+++.+|....            ..    ..  . ..............      .......+..++
T Consensus       235 ~~~~~~~l~~~~~g~~v~~g~~~~------------~~----~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (339)
T cd08249         235 AQLCAEALGRSGGGKLVSLLPVPE------------ET----EP--R-KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLP  295 (339)
T ss_pred             HHHHHHHHhccCCCEEEEecCCCc------------cc----cC--C-CCceEEEEEeeeecccccccccchHHHHHHHH
Confidence            9999999999  999999986511            00    00  0 00111111111110      011235677889


Q ss_pred             HHHHcCCceeccceeec--cccHHHHHHHHhcCC-CCCeEEEEc
Q 017901          323 RLSETGKLKIPVDKTFH--MTQVREAHEAKDKRL-IPGKVVLEF  363 (364)
Q Consensus       323 ~~~~~g~i~~~~~~~~~--l~~~~eA~~~~~~~~-~~gkvvi~~  363 (364)
                      ++++++++.+.....++  ++++++||+.+.+++ ..+|+|+++
T Consensus       296 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         296 ELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            99999999877666777  999999999999998 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.2e-36  Score=280.71  Aligned_cols=316  Identities=26%  Similarity=0.347  Sum_probs=254.5

Q ss_pred             ceeeEEecccCC--CceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           28 SCRAVVLPRFGG--PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        28 ~~~a~~~~~~g~--~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      +||++.+.+++.  ++.++++ +.+.|.+.++||+||+.++|+|++|+....|..+..  ..+|.++|+|++|+|+.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~   77 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGE   77 (329)
T ss_pred             CceEEEeccCCCCcccCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECC
Confidence            489999999887  6788999 999999999999999999999999999988864321  35788999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCc
Q 017901          106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG  185 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g  185 (364)
                      +++.+++||+|+++..     |+|++|+.++.+.++++|++  +.+++.++.++.|||+++.+...+++|++++|+|++|
T Consensus        78 ~v~~~~~Gd~V~~~~~-----g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g  150 (329)
T cd08250          78 GVTDFKVGDAVATMSF-----GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAG  150 (329)
T ss_pred             CCCCCCCCCEEEEecC-----cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCcc
Confidence            9999999999999865     89999999999999999997  3567788899999999997778899999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccC
Q 017901          186 AVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKR  260 (364)
Q Consensus       186 ~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~  260 (364)
                      .+|++++++|+..|++|+++++++++ +.++++|++.+++....++.+.+.    +.+|++|||+|+. .+..+++++++
T Consensus       151 ~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~  229 (329)
T cd08250         151 GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLAL  229 (329)
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhcc
Confidence            99999999999999999999876654 777889998888776655444332    2399999999986 89999999999


Q ss_pred             CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHHHHHHHHHcCCceec--c
Q 017901          261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLEEIRRLSETGKLKIP--V  334 (364)
Q Consensus       261 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~i~~~--~  334 (364)
                      +|+++.+|....... .++.   .+..   ..... ...+.+++++.++....    ..+.+..+++++.++.+++.  .
T Consensus       230 ~g~~v~~g~~~~~~~-~~~~---~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  301 (329)
T cd08250         230 KGRLIVIGFISGYQS-GTGP---SPVK---GATLP-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDP  301 (329)
T ss_pred             CCeEEEEecccCCcc-cCcc---cccc---ccccc-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECC
Confidence            999999986511000 0000   0000   00000 12355677888776531    13567888999999998873  4


Q ss_pred             ceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          335 DKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       335 ~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .+.|+++++++|++.+.++...+|++++
T Consensus       302 ~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         302 TRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             ccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            5679999999999999998888899874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.1e-36  Score=284.41  Aligned_cols=308  Identities=24%  Similarity=0.315  Sum_probs=250.3

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++..++++  +++. +++.|.+.++||+|++.++++|++|+..+.|..+    ..+|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~   73 (363)
T cd08279           1 MRAAVLHEVGKP--LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVT   73 (363)
T ss_pred             CeEEEEecCCCC--ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCcc
Confidence            789999987765  7888 9999999999999999999999999999888643    25678999999999999999999


Q ss_pred             CCCCCCEEEEecCC-------------------------------------------CCCCCcceeEEeecCCccccCCC
Q 017901          109 SLTVGQEVFGALHP-------------------------------------------TAVRGTYADYAVLSEDELTPKPV  145 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-------------------------------------------~~~~g~~~~~~~~~~~~~~~ip~  145 (364)
                      .+++||+|++....                                           ....|+|++|+.++.+.++++|+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~  153 (363)
T cd08279          74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD  153 (363)
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence            99999999984210                                           01358999999999999999999


Q ss_pred             CCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceee
Q 017901          146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAV  223 (364)
Q Consensus       146 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~  223 (364)
                      ++++++++.+++++++||+++.....+.++++++|+| +|.+|++++++|+..|++ |+++.+++.+ +.++++|+++++
T Consensus       154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv  232 (363)
T cd08279         154 DIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTV  232 (363)
T ss_pred             CCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEe
Confidence            9999999999999999999987888999999999996 799999999999999996 8888776655 777889999898


Q ss_pred             eCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhh
Q 017901          224 DYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT  298 (364)
Q Consensus       224 ~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (364)
                      +++..++...+.     +++|+++|++|+...+..++++++++|+++.+|....           ..     ...+....
T Consensus       233 ~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~-----~~~~~~~~  296 (363)
T cd08279         233 NASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP-----------GE-----TVSLPALE  296 (363)
T ss_pred             CCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC-----------Cc-----ccccCHHH
Confidence            887655554442     2399999999976588999999999999999986410           00     00111112


Q ss_pred             hhccceeEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEE
Q 017901          299 WYSYGIDYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVV  360 (364)
Q Consensus       299 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvv  360 (364)
                      +..++..+.+++..  ...+.+++++++++++.+++  .+++.|+++++++|++.+.+++..+.++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         297 LFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            33455666665442  23678999999999999886  3778999999999999999888754444

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=1.2e-36  Score=280.03  Aligned_cols=311  Identities=21%  Similarity=0.235  Sum_probs=245.2

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||++++.+++++.++++ +.|.|.+.++||+|++.++++|++|+..+.|..+..  ..+|.++|||++|+|+++  +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~--~~~   75 (325)
T cd05280           1 FKALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVT--RNYPHTPGIDAAGTVVSS--DDP   75 (325)
T ss_pred             CceEEEcccCCCCcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCC--CCCCCccCcccEEEEEEe--CCC
Confidence            789999988876679999 999999999999999999999999999998865321  245778999999999998  456


Q ss_pred             CCCCCCEEEEecC--CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhccc--C-CCCEEEEEcC
Q 017901          109 SLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM--S-EGQRLLVLGG  183 (364)
Q Consensus       109 ~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~--~-~g~~vli~g~  183 (364)
                      .+++||+|++...  ....+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++......  . .+++|+|+|+
T Consensus        76 ~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~  155 (325)
T cd05280          76 RFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGA  155 (325)
T ss_pred             CCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECC
Confidence            7999999998641  011358999999999999999999999999999999999999988544333  5 4579999998


Q ss_pred             CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChh--HHHHhc-CCccEEEECCCCchhHHHHHhhcc
Q 017901          184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD--IELAIK-GKFDAVLDTIGAPETERLGLNFLK  259 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~--~~~~i~-g~~D~vid~~g~~~~~~~~~~~l~  259 (364)
                      +|.+|++++++|+.+|++|+++++++++ +.++++|++++++.+...  ...... +.+|++|||+|+. .+..++++++
T Consensus       156 ~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~  234 (325)
T cd05280         156 TGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD-VLANLLKQTK  234 (325)
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-HHHHHHHhhc
Confidence            8999999999999999999998777654 778899999888765432  122222 2399999999997 8999999999


Q ss_pred             CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceecc
Q 017901          260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIPV  334 (364)
Q Consensus       260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~~  334 (364)
                      ++|+++.+|....           .+.      .........+++++.+......     .+.++.+.+++..+ +.+.+
T Consensus       235 ~~g~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  296 (325)
T cd05280         235 YGGVVASCGNAAG-----------PEL------TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPD-LLEIV  296 (325)
T ss_pred             CCCEEEEEecCCC-----------Ccc------ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcC-Cccce
Confidence            9999999986511           000      0111123367888877654311     13445555555666 33457


Q ss_pred             ceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          335 DKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       335 ~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ...|+++++++|++.+.+++..||+|+++
T Consensus       297 ~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         297 VREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             eeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            88999999999999999999999999874

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.4e-36  Score=281.20  Aligned_cols=310  Identities=26%  Similarity=0.340  Sum_probs=257.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++..++++. +.+. +.+.|.+.+++|+|++.++++|++|+....|.++.  ....|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~   76 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVT   76 (338)
T ss_pred             CeeEEEecCCCCc-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCc
Confidence            7899999887775 7788 88899999999999999999999999999886542  234577899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .+++||+|++....                       ....|+|++|+.++.+.++++|+++++.+++.++.+++|||++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~  156 (338)
T cd08254          77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA  156 (338)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            99999999872110                       0125899999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccE
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDA  240 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~  240 (364)
                      +.....++++++++|.| +|.+|++++++|+..|++|+++++++++ +.++++|++++++.........+.    +.+|+
T Consensus       157 l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~  235 (338)
T cd08254         157 VVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDV  235 (338)
T ss_pred             HHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceE
Confidence            87878899999999986 7999999999999999999999776655 778889998888776544433221    23999


Q ss_pred             EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE  320 (364)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (364)
                      ++||+|....+..++++|+++|+++.+|....            ..      ......+..++..+.+++.. ..+.+..
T Consensus       236 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~  296 (338)
T cd08254         236 IFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------------KL------TVDLSDLIARELRIIGSFGG-TPEDLPE  296 (338)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------------CC------ccCHHHHhhCccEEEEeccC-CHHHHHH
Confidence            99999977689999999999999999986410            00      01112355677777776643 5778999


Q ss_pred             HHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++++++.+.+. .+.|+++++++|++.+.+++..||+|+++
T Consensus       297 ~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         297 VLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            9999999999876 77999999999999999999999999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-36  Score=283.51  Aligned_cols=306  Identities=21%  Similarity=0.242  Sum_probs=243.0

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcccc------CCCCCcccccceeEEEEe
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF------EPLLPLILGRDISGEVAA  102 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~------~~~~p~~~G~e~~G~V~~  102 (364)
                      |||+++.++   ..++++ +.+.|++.+++|+||+.++++|++|+..+.|....+.      ...+|.++|||++|+|++
T Consensus         1 mka~~~~~~---~~~~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~   76 (350)
T cd08256           1 MRAVVCHGP---QDYRLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE   76 (350)
T ss_pred             CeeEEEecC---CceEEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence            689999854   348899 9999999999999999999999999998888531110      014677899999999999


Q ss_pred             ecCCCC--CCCCCCEEEEecCC-------------------------CCCCCcceeEEeecCC-ccccCCCCCChhhhcc
Q 017901          103 VGASVR--SLTVGQEVFGALHP-------------------------TAVRGTYADYAVLSED-ELTPKPVSVTHADASA  154 (364)
Q Consensus       103 vG~~~~--~~~~Gd~V~~~~~~-------------------------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa~  154 (364)
                      +|++++  .|++||+|++....                         ....|+|++|+.++.+ .++++|+++++.+++.
T Consensus        77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~  156 (350)
T cd08256          77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL  156 (350)
T ss_pred             eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence            999998  89999999872110                         0135899999999988 5789999999999998


Q ss_pred             ccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHH
Q 017901          155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       155 ~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      + .++.|+|+++ +.+++++|++|+|.| +|.+|++++++|+.+|++ ++++.+++++ ..+.++|+++++++...++.+
T Consensus       157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  233 (350)
T cd08256         157 I-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVE  233 (350)
T ss_pred             h-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHH
Confidence            8 7889999998 788999999999955 799999999999999986 5555555554 777899999888877655544


Q ss_pred             Hhc----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhh-hhccceeE
Q 017901          233 AIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT-WYSYGIDY  306 (364)
Q Consensus       233 ~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  306 (364)
                      .+.    + .+|++||++|+...+..++++++++|+++.+|....            ..    .  ..+.. ...+++++
T Consensus       234 ~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~----~--~~~~~~~~~~~~~i  295 (350)
T cd08256         234 KIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD------------PV----T--VDWSIIGDRKELDV  295 (350)
T ss_pred             HHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC------------CC----c--cChhHhhcccccEE
Confidence            443    1 299999999975578899999999999999985410            00    0  00111 13456677


Q ss_pred             EEEEeccCHHHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          307 SYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      .+++..  ...+.+++++++++.+++.  +++.|+++++++|++.+.+++..+|+++
T Consensus       296 ~~~~~~--~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         296 LGSHLG--PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             EEeccC--chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            776543  3468889999999999873  7889999999999999999988889874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-36  Score=280.46  Aligned_cols=306  Identities=29%  Similarity=0.399  Sum_probs=250.5

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |+++++..++  +.+.++ +.|.|.+.+++|+|+++++++|++|++.+.|..+.   ...|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~--~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~   74 (332)
T cd08259           1 MKAAILHKPN--KPLQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVE   74 (332)
T ss_pred             CeEEEEecCC--CceEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCc
Confidence            6899998633  458888 99999999999999999999999999999886432   24578999999999999999999


Q ss_pred             CCCCCCEEEEecCCC-----------------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .+++||+|+++....                       ...|+|++|+.++.+.++++|+++++++++.+++.+.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~  154 (332)
T cd08259          75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA  154 (332)
T ss_pred             cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence            999999999875210                       125899999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--CCccEEE
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--GKFDAVL  242 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vi  242 (364)
                      +.. +.+.++++++|+|++|.+|++++++++..|++|++++++++. +.+.+++.+.+++...  +.+.+.  +++|+++
T Consensus       155 l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~v~  231 (332)
T cd08259         155 LKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLGGADVVI  231 (332)
T ss_pred             HHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhccCCCEEE
Confidence            866 889999999999999999999999999999999998876554 6778888887776543  333333  2399999


Q ss_pred             ECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHH
Q 017901          243 DTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIR  322 (364)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (364)
                      +|+|.. ....++++++++|+++.+|....           ....      ........++..+.+... ....++++++
T Consensus       232 ~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~-----------~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  292 (332)
T cd08259         232 ELVGSP-TIEESLRSLNKGGRLVLIGNVTP-----------DPAP------LRPGLLILKEIRIIGSIS-ATKADVEEAL  292 (332)
T ss_pred             ECCChH-HHHHHHHHhhcCCEEEEEcCCCC-----------CCcC------CCHHHHHhCCcEEEEecC-CCHHHHHHHH
Confidence            999987 78899999999999999986511           0000      000012234556655542 2467889999


Q ss_pred             HHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          323 RLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       323 ~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      +++.++.+++.+++.|+++++++||+.+.+++..||++++
T Consensus       293 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         293 KLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            9999999988888999999999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.2e-36  Score=280.77  Aligned_cols=307  Identities=20%  Similarity=0.291  Sum_probs=248.3

Q ss_pred             eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      ||++++..++   .++++ +.+.|+| .++||+|+++++++|++|+..+.|.++.   ..+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~---~~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v   73 (345)
T cd08286           1 MKALVYHGPG---KISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAV   73 (345)
T ss_pred             CceEEEecCC---ceeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCc
Confidence            6889998554   48898 9999986 8999999999999999999999886543   2347899999999999999999


Q ss_pred             CCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhccccchHHH
Q 017901          108 RSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAALT  161 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t  161 (364)
                      +.+++||+|+.....                        ...+|+|++|+.++.+  .++++|++++..+++.++..+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t  153 (345)
T cd08286          74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT  153 (345)
T ss_pred             cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence            999999999875311                        0124899999999987  89999999999999999999999


Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----
Q 017901          162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----  235 (364)
Q Consensus       162 a~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----  235 (364)
                      ||+++.....+.+|++++|.| +|.+|++++|+|+.+| .+|+++.+++.+ ..++++|++.++++...++...+.    
T Consensus       154 a~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~  232 (345)
T cd08286         154 GYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTD  232 (345)
T ss_pred             HHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhC
Confidence            999876778899999999987 6999999999999999 688887665554 777899999999887655544332    


Q ss_pred             -CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC
Q 017901          236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD  314 (364)
Q Consensus       236 -g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (364)
                       +++|++|||+|+...+..++++++++|+++.+|....            ..      .+....++.+++++.+....  
T Consensus       233 ~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------------~~------~~~~~~~~~~~~~~~~~~~~--  292 (345)
T cd08286         233 GRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------------PV------DLHLEKLWIKNITITTGLVD--  292 (345)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------------CC------CcCHHHHhhcCcEEEeecCc--
Confidence             2399999999986688899999999999999985410            11      01111335678888765432  


Q ss_pred             HHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCC--CCeEEEEc
Q 017901          315 AEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLI--PGKVVLEF  363 (364)
Q Consensus       315 ~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~--~gkvvi~~  363 (364)
                      .+.+..++++++++.+++  .+++.|+++++++|++.+.+...  ..|++|+|
T Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         293 TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            356888899999998875  36789999999999999987643  34999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2e-36  Score=280.10  Aligned_cols=305  Identities=24%  Similarity=0.331  Sum_probs=248.2

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||++++++   +.+++. +.+.|.+.++||+|++.++++|++|+....|..+..   .+|.++|+|++|+|+++|++++
T Consensus         1 ~~a~~~~~~---~~~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~---~~~~~~g~e~~G~V~~~G~~v~   73 (337)
T cd08261           1 MKALVCEKP---GRLEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA---SYPRILGHELSGEVVEVGEGVA   73 (337)
T ss_pred             CeEEEEeCC---CceEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC---CCCcccccccEEEEEEeCCCCC
Confidence            688999864   358898 999999999999999999999999999988864321   3477899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .|++||+|++....                       ....|+|++|+.++.+ ++++|+++++++++++ ..+++++++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~  151 (337)
T cd08261          74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA  151 (337)
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence            99999999973210                       0125899999999999 9999999999999877 567788988


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCcc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFD  239 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D  239 (364)
                      + ...++.+|+++||+| +|.+|++++|+|+.+|++|+++.+++++ +.++++|+++++++...++.+.+.     ..+|
T Consensus       152 ~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd  229 (337)
T cd08261         152 V-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGAD  229 (337)
T ss_pred             H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCC
Confidence            7 778999999999997 7999999999999999999999766554 777889999999888766555543     1399


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE  319 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (364)
                      ++|||+|+...+..++++++++|+++.+|....            +.    .  .....+..+++++.+... ...+.++
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------------~~----~--~~~~~~~~~~~~~~~~~~-~~~~~~~  290 (337)
T cd08261         230 VVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------------PV----T--FPDPEFHKKELTILGSRN-ATREDFP  290 (337)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------------CC----c--cCHHHHHhCCCEEEEecc-CChhhHH
Confidence            999999886688999999999999999986510            10    0  000123445566666542 2466889


Q ss_pred             HHHHHHHcCCcee--ccceeeccccHHHHHHHHhcC-CCCCeEEEEc
Q 017901          320 EIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKR-LIPGKVVLEF  363 (364)
Q Consensus       320 ~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~-~~~gkvvi~~  363 (364)
                      .+++++.++.+++  .+...|+++++++|++.+.++ ...+|+|+++
T Consensus       291 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         291 DVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            9999999999987  678899999999999999988 4778999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.4e-36  Score=283.82  Aligned_cols=307  Identities=21%  Similarity=0.308  Sum_probs=246.7

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      +||+++.+.+..  ++++ +.+.|.+.+++|+|++.++++|++|++.+.|..+    ..+|.++|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~   73 (365)
T cd05279           1 CKAAVLWEKGKP--LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVT   73 (365)
T ss_pred             CceeEEecCCCC--cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcc
Confidence            468888876655  8888 9999999999999999999999999999988643    24678999999999999999999


Q ss_pred             CCCCCCEEEEecCC--------------------------------------------CCCCCcceeEEeecCCccccCC
Q 017901          109 SLTVGQEVFGALHP--------------------------------------------TAVRGTYADYAVLSEDELTPKP  144 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~ip  144 (364)
                      .+++||+|++....                                            ....|+|++|+.++.+.++++|
T Consensus        74 ~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  153 (365)
T cd05279          74 TLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKID  153 (365)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECC
Confidence            99999999986310                                            0023789999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCcee
Q 017901          145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQA  222 (364)
Q Consensus       145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v  222 (364)
                      +++++++++.+.+++.+||+++.+.+++++|++++|+| +|.+|++++++|+.+|++ ++++.+++++ +.++++|++++
T Consensus       154 ~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~  232 (365)
T cd05279         154 PDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATEC  232 (365)
T ss_pred             CCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCee
Confidence            99999999999999999999987888999999999997 799999999999999996 6666655544 77899999999


Q ss_pred             eeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhcc-CCCEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901          223 VDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (364)
Q Consensus       223 ~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (364)
                      ++.++.  ++.+.+.    +.+|++||++|....+..++++++ ++|+++.+|....          . ...     .++
T Consensus       233 v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----------~-~~~-----~~~  296 (365)
T cd05279         233 INPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----------G-TEA-----TLD  296 (365)
T ss_pred             cccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----------C-Cce-----eeC
Confidence            887665  4444332    239999999997558899999999 9999999985410          0 000     111


Q ss_pred             hhhhhccceeEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          296 MQTWYSYGIDYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       296 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      ...+ .++.++.+.+..  ...+.+..++++++++.+.+  .+++.|+++++++||+.+.+++. .|+++
T Consensus       297 ~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~  364 (365)
T cd05279         297 PNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL  364 (365)
T ss_pred             HHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence            1122 456667666542  24678899999999999875  48889999999999999987765 46665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.2e-36  Score=277.54  Aligned_cols=312  Identities=29%  Similarity=0.397  Sum_probs=260.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++...+..+.+.++ +.+.|.+.++|++|++.++++|++|++...|..+..  ...|.++|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~   77 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVT   77 (336)
T ss_pred             CeEEEEeccCCCcceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCc
Confidence            789999988777788998 888888999999999999999999999988865322  23678899999999999999999


Q ss_pred             CCCCCCEEEEecCCC-----------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcc
Q 017901          109 SLTVGQEVFGALHPT-----------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAAR  171 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~-----------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~  171 (364)
                      ++++||+|++.....                 ...|+|++|+.++.+.++++|+++++.+++.++..+.+||+++...+.
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~  157 (336)
T cd08276          78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP  157 (336)
T ss_pred             CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence            999999999875210                 125889999999999999999999999999999999999999877789


Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc-----CCccEEEEC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK-----GKFDAVLDT  244 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~-----g~~D~vid~  244 (364)
                      +++|++++|+| +|.+|++++++|++.|++|+++.+++++ +.++++|++++++... .++...+.     ..+|+++||
T Consensus       158 ~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  236 (336)
T cd08276         158 LKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEV  236 (336)
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEEC
Confidence            99999999996 8999999999999999999999877654 7777889998888765 44544443     139999999


Q ss_pred             CCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHH
Q 017901          245 IGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL  324 (364)
Q Consensus       245 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (364)
                      +++. .+..++++++++|+++.+|....           ...      .......+.+++++.+.... ....+.+++++
T Consensus       237 ~~~~-~~~~~~~~l~~~G~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  297 (336)
T cd08276         237 GGPG-TLAQSIKAVAPGGVISLIGFLSG-----------FEA------PVLLLPLLTKGATLRGIAVG-SRAQFEAMNRA  297 (336)
T ss_pred             CChH-HHHHHHHhhcCCCEEEEEccCCC-----------Ccc------CcCHHHHhhcceEEEEEecC-cHHHHHHHHHH
Confidence            9976 88999999999999999986511           000      01111346778888887754 46788889999


Q ss_pred             HHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          325 SETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       325 ~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +.++.+.+..++.|++++++++++.+.+++..+|+++++
T Consensus       298 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         298 IEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999988877788999999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=4.1e-36  Score=276.39  Aligned_cols=310  Identities=22%  Similarity=0.267  Sum_probs=245.1

Q ss_pred             eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~  109 (364)
                      ||+++...+++..++++ +.|.|.+.++||+||+.++++|++|+..+.|..+.  ....|.++|||++|+|+.  +++..
T Consensus         1 ~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~   75 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPR   75 (323)
T ss_pred             CeEEEccCCCCcceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCC
Confidence            68888888888889999 99999999999999999999999999999886532  124588899999999998  55678


Q ss_pred             CCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHh--cccCCCC-EEEEEcCC
Q 017901          110 LTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA--ARMSEGQ-RLLVLGGG  184 (364)
Q Consensus       110 ~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~-~vli~g~~  184 (364)
                      |++||+|++....  ...+|+|++|+.++.+.++++|+++++.+++.+++.+++||.++...  ..+.+|+ +++|+|++
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~  155 (323)
T TIGR02823        76 FREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGAT  155 (323)
T ss_pred             CCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCC
Confidence            9999999987410  11358999999999999999999999999999999999998876433  3478898 99999988


Q ss_pred             chHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhH-HHHhc-CCccEEEECCCCchhHHHHHhhccCC
Q 017901          185 GAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDI-ELAIK-GKFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       185 g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~-~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      |.+|++++++|+.+|++++++++++++ +.++++|++++++.++.+. ...+. +++|+++||+|+. .+..++++++++
T Consensus       156 g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~  234 (323)
T TIGR02823       156 GGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG  234 (323)
T ss_pred             cHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH-HHHHHHHHhCCC
Confidence            999999999999999999988665554 7788999988887755432 11222 3389999999987 889999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-C----HHHHHHHHHHHHcCCceeccce
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-D----AEGLEEIRRLSETGKLKIPVDK  336 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~g~i~~~~~~  336 (364)
                      |+++.+|....           .+.      ......++.+++++.+..... .    ...+..+.+++..+.+.+. .+
T Consensus       235 G~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  296 (323)
T TIGR02823       235 GAVAACGLAGG-----------PDL------PTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TR  296 (323)
T ss_pred             CEEEEEcccCC-----------CCc------cccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-ee
Confidence            99999986410           011      000112336677777755321 1    2245566667778877654 56


Q ss_pred             eeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          337 TFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .|+++++++||+.+.+++..+|+|+++
T Consensus       297 ~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       297 EITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             eecHHHHHHHHHHHhCCCccceEEEeC
Confidence            899999999999999999999999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=2.5e-36  Score=278.14  Aligned_cols=311  Identities=21%  Similarity=0.257  Sum_probs=238.2

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||++++.++++..+.++ +.+.|.|.++||+||+.++++|++|.....+...  ....+|.++|||++|+|++.|  +.
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~V~~~~--~~   75 (326)
T cd08289           1 FQALVVEKDEDDVSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK--IVKRYPFIPGIDLAGTVVESN--DP   75 (326)
T ss_pred             CeeEEEeccCCcceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc--ccCCCCcCcccceeEEEEEcC--CC
Confidence            789999988887788899 9999999999999999999999999876653211  122458899999999999954  56


Q ss_pred             CCCCCCEEEEecC--CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhc--c-cCCCCEEEEEcC
Q 017901          109 SLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA--R-MSEGQRLLVLGG  183 (364)
Q Consensus       109 ~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~--~-~~~g~~vli~g~  183 (364)
                      .|++||+|++...  ....+|+|++|+.++.+.++++|+++++.+++.+++++.|||+++....  . ..++++|+|+|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~  155 (326)
T cd08289          76 RFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGA  155 (326)
T ss_pred             CCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcC
Confidence            7999999998741  1113599999999999999999999999999999999999998874332  2 345789999998


Q ss_pred             CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh---c-CCccEEEECCCCchhHHHHHhhc
Q 017901          184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI---K-GKFDAVLDTIGAPETERLGLNFL  258 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i---~-g~~D~vid~~g~~~~~~~~~~~l  258 (364)
                      +|.+|++++|+|+.+|++|+++++++++ +.++++|++++++.++.. .+.+   . +.+|++|||+|+. .+..+++++
T Consensus       156 ~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l  233 (326)
T cd08289         156 TGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQ-EESIKPLEKQRWAGAVDPVGGK-TLAYLLSTL  233 (326)
T ss_pred             CchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHH-HHHHHhhccCCcCEEEECCcHH-HHHHHHHHh
Confidence            8999999999999999999999776655 778999998888865432 2222   1 2399999999996 899999999


Q ss_pred             cCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceec
Q 017901          259 KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIP  333 (364)
Q Consensus       259 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~  333 (364)
                      +++|+++.+|....           ....      .....++.+++++.+++....     .+.+..+...+....+...
T Consensus       234 ~~~G~~i~~g~~~~-----------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (326)
T cd08289         234 QYGGSVAVSGLTGG-----------GEVE------TTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNE  296 (326)
T ss_pred             hcCCEEEEEeecCC-----------CCCC------cchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccc
Confidence            99999999986410           0110      001124467788877643211     1222333332222223334


Q ss_pred             cceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          334 VDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++.|+++++++||+.+.+++..||+|+++
T Consensus       297 ~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         297 IKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             cceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            688999999999999999999999999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=2.5e-36  Score=277.67  Aligned_cols=304  Identities=29%  Similarity=0.415  Sum_probs=250.4

Q ss_pred             ecccCCCc--eEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCC
Q 017901           34 LPRFGGPE--VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT  111 (364)
Q Consensus        34 ~~~~g~~~--~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~  111 (364)
                      ++.++.+.  .++++ +.+.|.+.+++|+||+.++++|+.|+..+.|....  ....|.++|+|++|+|+++|++++.++
T Consensus         3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~   79 (323)
T cd05282           3 YTQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLL   79 (323)
T ss_pred             eCcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCC
Confidence            34455554  78888 88889999999999999999999999998876432  124578999999999999999999999


Q ss_pred             CCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHH
Q 017901          112 VGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAA  191 (364)
Q Consensus       112 ~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~  191 (364)
                      +||+|+++..    .|+|++|+.++.+.++++|+++++.+++.+++.+++||+++...+.+.+|++++|+|+.|.+|+++
T Consensus        80 ~Gd~V~~~~~----~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~  155 (323)
T cd05282          80 VGQRVLPLGG----EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRML  155 (323)
T ss_pred             CCCEEEEeCC----CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHH
Confidence            9999999862    389999999999999999999999999999999999999987878889999999999889999999


Q ss_pred             HHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEE
Q 017901          192 VQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYM  265 (364)
Q Consensus       192 ~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v  265 (364)
                      +++|+.+|++++++++++++ +.++++|+++++++...++...+.     ..+|++|||+|+. .....+++++++|+++
T Consensus       156 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v  234 (323)
T cd05282         156 IQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPGGTLV  234 (323)
T ss_pred             HHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCCCEEE
Confidence            99999999999998776654 777899999999887655555443     1399999999997 6778899999999999


Q ss_pred             EEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----C----HHHHHHHHHHHHcCCceeccce
Q 017901          266 TLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----D----AEGLEEIRRLSETGKLKIPVDK  336 (364)
Q Consensus       266 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~g~i~~~~~~  336 (364)
                      .+|....           .+.    .  .....+..+++++.+.....     .    .+.+.++++++.++.+.+.+++
T Consensus       235 ~~g~~~~-----------~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~  297 (323)
T cd05282         235 NYGLLSG-----------EPV----P--FPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGA  297 (323)
T ss_pred             EEccCCC-----------CCC----C--CCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccc
Confidence            9986411           000    0  00112233677777766531     1    2467888999999999887889


Q ss_pred             eeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          337 TFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       337 ~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .|+++++++|++.+.+++..+|+|++
T Consensus       298 ~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         298 KFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             eecHHHHHHHHHHHhcCCCCceEeeC
Confidence            99999999999999998888999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=6.2e-36  Score=280.47  Aligned_cols=317  Identities=24%  Similarity=0.272  Sum_probs=244.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      ||++++..+   +.++++ ++|.|.+ .++||+||+.++++|++|++.+.|..+    ..+|+++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~---~~~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v   72 (375)
T cd08282           1 MKAVVYGGP---GNVAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAV   72 (375)
T ss_pred             CceEEEecC---CceeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCC
Confidence            678888744   458899 9999985 799999999999999999999988653    2468899999999999999999


Q ss_pred             CCCCCCCEEEEecCC---------------------------------CCCCCcceeEEeecCC--ccccCCCCCChh--
Q 017901          108 RSLTVGQEVFGALHP---------------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHA--  150 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~---------------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~--  150 (364)
                      +.+++||+|++....                                 ...+|+|++|+.++.+  .++++|+++++.  
T Consensus        73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~  152 (375)
T cd08282          73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK  152 (375)
T ss_pred             CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence            999999999873210                                 0124899999999976  899999999998  


Q ss_pred             -hhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCC
Q 017901          151 -DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSS  227 (364)
Q Consensus       151 -~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~  227 (364)
                       +++.++.++.|||+++ ..+++.+|++|+|.| .|.+|++++|+|+.+|+ +|+++.+++++ +.++++|+. .+++++
T Consensus       153 ~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~  229 (375)
T cd08282         153 DDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSD  229 (375)
T ss_pred             hheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence             5677888899999998 788999999999977 79999999999999998 78887666554 778899984 566665


Q ss_pred             hhHHHHhc----CCccEEEECCCCch-----------hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHH
Q 017901          228 KDIELAIK----GKFDAVLDTIGAPE-----------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (364)
Q Consensus       228 ~~~~~~i~----g~~D~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (364)
                      .++...+.    +.+|++|||+|+..           .+..++++++++|+++.+|.....   ..........  ....
T Consensus       230 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~---~~~~~~~~~~--~~~~  304 (375)
T cd08282         230 GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAE---DPGAGDAAAK--QGEL  304 (375)
T ss_pred             ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCc---cccccccccc--Cccc
Confidence            55544433    23999999999862           378999999999999988764110   0000000000  0011


Q ss_pred             HHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          293 KKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .+....++.++..+.+.... ..+.+..++++++++++++  .+++.|+++++++|++.+.+++ .+|+|+++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         305 SFDFGLLWAKGLSFGTGQAP-VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             cccHHHHHhcCcEEEEecCC-chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            11222345556666555432 4567888999999999987  3889999999999999999888 89999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=6.9e-36  Score=277.19  Aligned_cols=306  Identities=25%  Similarity=0.387  Sum_probs=248.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++++++   .+.++ +.+.|.+.+++|+||+.++++|++|+..+.|..+   +...|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~---~~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~   73 (343)
T cd08235           1 MKAAVLHGPN---DVRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVT   73 (343)
T ss_pred             CeEEEEecCC---ceEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCC
Confidence            6889998665   47888 8999999999999999999999999999888542   224577899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCc-----cccCCCCCChhhhccccchHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDE-----LTPKPVSVTHADASAIPFAAL  160 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~  160 (364)
                      .+++||+|+++...                       ....|+|++|+.++.+.     ++++|+++++.+++.+ ..+.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~  152 (343)
T cd08235          74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA  152 (343)
T ss_pred             CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence            99999999986320                       01358999999999998     9999999999998776 7788


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---
Q 017901          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---  235 (364)
Q Consensus       161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---  235 (364)
                      +||+++. ...+++|++|+|+| +|.+|++++|+|+..|++ |+++.+++++ +.+.++|.++++++++.++.+.+.   
T Consensus       153 ~a~~~l~-~~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~  230 (343)
T cd08235         153 CCINAQR-KAGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT  230 (343)
T ss_pred             HHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHh
Confidence            9999984 56899999999997 799999999999999998 8888665554 677889999899887766655443   


Q ss_pred             -C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          236 -G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       236 -g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                       + ++|++|||+|+...+..++++++++|+++.+|....          ....      .........+++.+.+.+.. 
T Consensus       231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~----------~~~~------~~~~~~~~~~~~~l~~~~~~-  293 (343)
T cd08235         231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPK----------GSTV------NIDPNLIHYREITITGSYAA-  293 (343)
T ss_pred             CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCC----------CCCc------ccCHHHHhhCceEEEEEecC-
Confidence             2 399999999976688899999999999999986411          0000      01112345567777666543 


Q ss_pred             CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          314 DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ..+.++.++++++++.+.+  .+...|+++++++|++.+.+++ .+|+|+.
T Consensus       294 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         294 SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            4677889999999999873  4677899999999999999999 8999873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.2e-36  Score=277.29  Aligned_cols=307  Identities=24%  Similarity=0.258  Sum_probs=241.8

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc--------ccCCCCCcccccceeEEE
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS--------IFEPLLPLILGRDISGEV  100 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V  100 (364)
                      |||+++...    .++++ +.+.|+++++||+|++.++++|++|+....|....        .....+|.++|+|++|+|
T Consensus         1 m~a~~~~~~----~~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   75 (341)
T cd08262           1 MRAAVFRDG----PLVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV   75 (341)
T ss_pred             CceEEEeCC----ceEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence            688888744    58888 99999999999999999999999999998873210        011235788999999999


Q ss_pred             EeecCCCCC-CCCCCEEEEecCCC-------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHH
Q 017901          101 AAVGASVRS-LTVGQEVFGALHPT-------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL  166 (364)
Q Consensus       101 ~~vG~~~~~-~~~Gd~V~~~~~~~-------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l  166 (364)
                      +++|++++. |++||+|++.....             ...|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus        76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~  154 (341)
T cd08262          76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV  154 (341)
T ss_pred             EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence            999999987 99999999873210             135899999999999999999999999877 667888999986


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEE-EeeCCccH-HHHHHcCCceeeeCCChhHHH-------Hhc-C
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVS-ATCGSKSI-DRVLAAGAEQAVDYSSKDIEL-------AIK-G  236 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi-~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~-------~i~-g  236 (364)
                       ..+++++|++|+|+| +|.+|.+++|+|+.+|++++ ++.+++++ ..++++|++++++++..+...       ... +
T Consensus       155 -~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~  232 (341)
T cd08262         155 -RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGP  232 (341)
T ss_pred             -HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCC
Confidence             788999999999997 69999999999999999754 44444444 777899998888876542211       111 2


Q ss_pred             CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHH
Q 017901          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE  316 (364)
Q Consensus       237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (364)
                      .+|++|||+|+...+..++++++++|+++.+|....          .....   ..     ....+++++.+.... ..+
T Consensus       233 ~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~----------~~~~~---~~-----~~~~~~~~~~~~~~~-~~~  293 (341)
T cd08262         233 KPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCME----------SDNIE---PA-----LAIRKELTLQFSLGY-TPE  293 (341)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC----------CCccC---HH-----HHhhcceEEEEEecc-cHH
Confidence            399999999985478889999999999999986511          00000   10     123456666655433 456


Q ss_pred             HHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          317 GLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       317 ~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .+.+++++++++.+.+  .+++.|+++++++|++.+.+++..+|+|++
T Consensus       294 ~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         294 EFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            8889999999999975  357899999999999999999988999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1e-35  Score=273.04  Aligned_cols=312  Identities=28%  Similarity=0.413  Sum_probs=250.3

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++...+.++.+.+. +.+.|.+.++||+||+.++++|++|+....|..+   ....|.++|||++|+|+++|+  .
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~   74 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--G   74 (320)
T ss_pred             CeEEEEcCCCCccceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--C
Confidence            688899877776778888 8888889999999999999999999999888542   224578899999999999995  5


Q ss_pred             CCCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCch
Q 017901          109 SLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~  186 (364)
                      .+++||+|+++...  ....|+|++|+.++.+.++++|+++++.+++.++.++.|||+++.+...+++|++++|+|++|.
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~  154 (320)
T cd08243          75 TFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSS  154 (320)
T ss_pred             CCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCCh
Confidence            79999999987531  1135899999999999999999999999999999999999999987788999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh---cCCccEEEECCCCchhHHHHHhhccCCC
Q 017901          187 VGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI---KGKFDAVLDTIGAPETERLGLNFLKRGG  262 (364)
Q Consensus       187 ~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i---~g~~D~vid~~g~~~~~~~~~~~l~~~G  262 (364)
                      +|++++|+|+.+|++|+++++++++ +.+.++|++++++. ..++.+.+   .+++|+++||+|+. .+..++++++++|
T Consensus       155 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g  232 (320)
T cd08243         155 VGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGG  232 (320)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHhCCCceEEEECCChH-HHHHHHHHhccCC
Confidence            9999999999999999999876655 77888999887754 33433333   22399999999986 8999999999999


Q ss_pred             EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-CHHHHHHHHHHHHcCCceeccceeeccc
Q 017901          263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-DAEGLEEIRRLSETGKLKIPVDKTFHMT  341 (364)
Q Consensus       263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~i~~~~~~~~~l~  341 (364)
                      +++.+|....          ..........  . .....+++.+.+++... ....+..++++++++.+++..++.|+++
T Consensus       233 ~~v~~g~~~~----------~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  299 (320)
T cd08243         233 IVCMTGLLGG----------QWTLEDFNPM--D-DIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFD  299 (320)
T ss_pred             EEEEEccCCC----------CcccCCcchh--h-hhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHH
Confidence            9999986411          0000000000  0 01134566666655321 2356888999999999988788899999


Q ss_pred             cHHHHHHHHhcCCCCCeEEE
Q 017901          342 QVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       342 ~~~eA~~~~~~~~~~gkvvi  361 (364)
                      ++++|++.+.++...+|+|+
T Consensus       300 ~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         300 EIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHHHHHHhCCCCCcEEe
Confidence            99999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=6.8e-36  Score=277.35  Aligned_cols=304  Identities=25%  Similarity=0.345  Sum_probs=244.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCC-CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      |+++++..+   ..++++ +.+.|.|. ++||+|++.++++|++|+....|..+    ...|.++|+|++|+|+++|+++
T Consensus         1 ~~a~~~~~~---~~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v   72 (344)
T cd08284           1 MKAVVFKGP---GDVRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEV   72 (344)
T ss_pred             CeeEEEecC---CCceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCc
Confidence            678898854   458999 99999885 99999999999999999999888543    2457789999999999999999


Q ss_pred             CCCCCCCEEEEecCC---------------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhccccch
Q 017901          108 RSLTVGQEVFGALHP---------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFA  158 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~---------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~  158 (364)
                      +.+++||+|++....                           ...+|+|++|+.++.+  .++++|+++++.+++.++.+
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~  152 (344)
T cd08284          73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI  152 (344)
T ss_pred             cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence            999999999986411                           0125899999999965  99999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-
Q 017901          159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-  235 (364)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-  235 (364)
                      ++|||+++. ...+.+|++|+|+| +|.+|++++++|+.+|+ +++++.+++++ ..+.++|+. .++.+..++...+. 
T Consensus       153 ~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~  229 (344)
T cd08284         153 LPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVRE  229 (344)
T ss_pred             hHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHH
Confidence            999999984 58899999999997 79999999999999997 88888665544 677889975 46665544444332 


Q ss_pred             ----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEe
Q 017901          236 ----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYM  311 (364)
Q Consensus       236 ----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                          +++|++|||+|+...+..++++++++|+++.+|....           ....      ......+.+++++.+.. 
T Consensus       230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----------~~~~------~~~~~~~~~~~~~~~~~-  291 (344)
T cd08284         230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTA-----------EEFP------FPGLDAYNKNLTLRFGR-  291 (344)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCC-----------CCcc------ccHHHHhhcCcEEEEec-
Confidence                2399999999986688999999999999999986511           0100      01112345666665543 


Q ss_pred             ccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          312 RADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       312 ~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ....+.+..+++++.++.+++  .+++.|+++++++|++.+.+++. +|+|++
T Consensus       292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            224678999999999999886  36789999999999999998887 999986

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=1.9e-35  Score=273.45  Aligned_cols=308  Identities=30%  Similarity=0.418  Sum_probs=250.0

Q ss_pred             eeeEEecccCCCc---eEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           29 CRAVVLPRFGGPE---VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        29 ~~a~~~~~~g~~~---~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      |+++++++++.++   .+..+ +.+.|.+.+++|+|++.++++|++|+..+.+..+   ....|.++|||++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~   76 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGS   76 (336)
T ss_pred             CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCC
Confidence            6899999888775   58888 8888899999999999999999999998877543   124577899999999999999


Q ss_pred             CCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCC-----CCEEEE
Q 017901          106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE-----GQRLLV  180 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~vli  180 (364)
                      +++.|++||+|++.... ..+|+|++|+.++.++++++|++++.++++.+++.+.+||+++.+.+.+.+     |++++|
T Consensus        77 ~v~~~~~Gd~V~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV  155 (336)
T cd08252          77 EVTLFKVGDEVYYAGDI-TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLI  155 (336)
T ss_pred             CCCCCCCCCEEEEcCCC-CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEE
Confidence            99999999999987421 135899999999999999999999999999999999999999877788887     999999


Q ss_pred             EcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHH
Q 017901          181 LGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLG  254 (364)
Q Consensus       181 ~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~  254 (364)
                      +|+.|.+|++++++|+.+| ++|+++++++++ +.+.++|++++++... ++...+.    +++|++|||+|+...+..+
T Consensus       156 ~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~  234 (336)
T cd08252         156 IGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQHWDAM  234 (336)
T ss_pred             EcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHHHHHHH
Confidence            9989999999999999999 999999776554 7788999998888764 3433332    2399999999975589999


Q ss_pred             HhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----------CHHHHHHHHH
Q 017901          255 LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----------DAEGLEEIRR  323 (364)
Q Consensus       255 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~  323 (364)
                      +++++++|+++.+|....            ..        ....+..+++++.+.+...           ....+.++++
T Consensus       235 ~~~l~~~g~~v~~g~~~~------------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (336)
T cd08252         235 AELIAPQGHICLIVDPQE------------PL--------DLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVAD  294 (336)
T ss_pred             HHHhcCCCEEEEecCCCC------------cc--------cchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHH
Confidence            999999999999985400            00        0112234566665543311           1245788999


Q ss_pred             HHHcCCceeccc---eeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          324 LSETGKLKIPVD---KTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       324 ~~~~g~i~~~~~---~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      ++.++.+.+...   +.++++++++|++.+.++...+|++++
T Consensus       295 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         295 LLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            999999987533   357999999999999999988999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.5e-35  Score=270.95  Aligned_cols=309  Identities=35%  Similarity=0.570  Sum_probs=254.3

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++.++.++++ +.+.|.+.+++|+|++.++++|++|+....|....  ....|.++|||++|+|+.+|+++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~   77 (326)
T cd08272           1 MKALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAA--RPPLPAILGCDVAGVVEAVGEGVT   77 (326)
T ss_pred             CeEEEEccCCCchheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCCC
Confidence            789999988888788898 88888899999999999999999999998875431  123577899999999999999999


Q ss_pred             CCCCCCEEEEecCCC-CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          109 SLTVGQEVFGALHPT-AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      +|++||+|+++.... ...|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.+...+++|++++|+|+++.+
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~  157 (326)
T cd08272          78 RFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGV  157 (326)
T ss_pred             CCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcH
Confidence            999999999875211 1248999999999999999999999999999999999999998788999999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCCC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGG  262 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G  262 (364)
                      |++++++|+..|++|++++++++.+.++++|.+.+++.... +.+.+.    + .+|+++||+|+. .+..++++++++|
T Consensus       158 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g  235 (326)
T cd08272         158 GHVAVQLAKAAGARVYATASSEKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALYG  235 (326)
T ss_pred             HHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccCC
Confidence            99999999999999999987744477888999888877655 544443    1 399999999997 7888999999999


Q ss_pred             EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----------CHHHHHHHHHHHHcCCcee
Q 017901          263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----------DAEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~i~~  332 (364)
                      +++.+|...             ..    .+.    ....+++.+.+.....          ....+..+++++.++.+.+
T Consensus       236 ~~v~~~~~~-------------~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~  294 (326)
T cd08272         236 RVVSILGGA-------------TH----DLA----PLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP  294 (326)
T ss_pred             EEEEEecCC-------------cc----chh----hHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc
Confidence            999998640             00    000    1124555555554321          1456888899999999887


Q ss_pred             ccc-eeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          333 PVD-KTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       333 ~~~-~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .++ +.|+++++++|++.+.++...+|+++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         295 LLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            765 8999999999999998888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.6e-36  Score=273.47  Aligned_cols=292  Identities=22%  Similarity=0.267  Sum_probs=234.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.++   +.++++ +.+.|++.++||+||+.++++|++|+....|..      ..|.++|||++|+|+++|++  
T Consensus         1 ~~a~~~~~~---~~~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~--   68 (319)
T cd08242           1 MKALVLDGG---LDLRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA--   68 (319)
T ss_pred             CeeEEEeCC---CcEEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC--
Confidence            689999854   358999 999999999999999999999999999998854      25789999999999999998  


Q ss_pred             CCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                       +++||+|......                        ...+|+|++|+.++.++++++|++++.++++.+ ....++|.
T Consensus        69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~  146 (319)
T cd08242          69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE  146 (319)
T ss_pred             -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence             6799999753211                        013689999999999999999999999888764 34446776


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEE
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLD  243 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid  243 (364)
                      ++ +..+++++++++|+| +|.+|++++|+|+.+|++|+++++++++ +.++++|++.++++...    .-.+.+|++||
T Consensus       147 ~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~vid  220 (319)
T cd08242         147 IL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE----SEGGGFDVVVE  220 (319)
T ss_pred             HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc----ccCCCCCEEEE
Confidence            65 778999999999997 7999999999999999999998776554 78888999888776432    11123999999


Q ss_pred             CCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHH
Q 017901          244 TIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR  323 (364)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (364)
                      |+|+...+..++++++++|+++..+....            ..      .+.+..+..++.++.+.+..    .++++++
T Consensus       221 ~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------------~~------~~~~~~~~~~~~~i~~~~~~----~~~~~~~  278 (319)
T cd08242         221 ATGSPSGLELALRLVRPRGTVVLKSTYAG------------PA------SFDLTKAVVNEITLVGSRCG----PFAPALR  278 (319)
T ss_pred             CCCChHHHHHHHHHhhcCCEEEEEcccCC------------CC------ccCHHHheecceEEEEEecc----cHHHHHH
Confidence            99986588999999999999998764310            11      11122355677788776543    2788899


Q ss_pred             HHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          324 LSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       324 ~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++++++  +.+++.|+++++++||+.+.++. .+|+|+++
T Consensus       279 ~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         279 LLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            99999994  55889999999999999998776 48999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.9e-35  Score=272.41  Aligned_cols=313  Identities=35%  Similarity=0.487  Sum_probs=257.8

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++...+.+..+.+. +.+.|.+.+++|+|++.++++|++|+..+.|..+.  ...+|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~   77 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVT   77 (342)
T ss_pred             CeEEEEecCCCccceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCC
Confidence            689998877777788888 88888899999999999999999999999885431  234578999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .|++||+|++....                       ....|+|++|+.++.+.++++|+++++.+++.++.++.+||++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~  157 (342)
T cd08266          78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM  157 (342)
T ss_pred             CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence            99999999986321                       0135889999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCcc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFD  239 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D  239 (364)
                      +.+...+.++++++|+|+++.+|++++++++..|++|+.+.+++++ +.+...+.+.+++....++...+.     +++|
T Consensus       158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCc
Confidence            8778899999999999998999999999999999999988776554 667778887777766554443332     2399


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE  319 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (364)
                      +++|++|+. .+..++++++++|+++.+|....          ....       ......+.+++.+.+.+.. ....+.
T Consensus       238 ~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~  298 (342)
T cd08266         238 VVVEHVGAA-TWEKSLKSLARGGRLVTCGATTG----------YEAP-------IDLRHVFWRQLSILGSTMG-TKAELD  298 (342)
T ss_pred             EEEECCcHH-HHHHHHHHhhcCCEEEEEecCCC----------CCCC-------cCHHHHhhcceEEEEEecC-CHHHHH
Confidence            999999987 88999999999999999986511          0000       0111234567777777654 467888


Q ss_pred             HHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          320 EIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       320 ~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .++++++++.+.+.+++.|+++++++|++.+.++...+|+++++
T Consensus       299 ~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         299 EALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             HHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999888889999999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=2.2e-35  Score=273.75  Aligned_cols=306  Identities=25%  Similarity=0.339  Sum_probs=245.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++++.+   .+.++ +.+.|++.++||+||+.++++|++|+....+..    ....|.++|+|++|+|+++|++++
T Consensus         1 ~~a~~~~~~~---~l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~   72 (343)
T cd08236           1 MKALVLTGPG---DLRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVD   72 (343)
T ss_pred             CeeEEEecCC---ceeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCC
Confidence            6899999654   47888 999999999999999999999999999887753    224577899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .|++||+|+++...                       ....|+|++|+.++.+.++++|+++++.+++.+ ..+.+||++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~  151 (343)
T cd08236          73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA  151 (343)
T ss_pred             cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence            99999999986210                       013589999999999999999999999999887 567899999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-Cc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KF  238 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~  238 (364)
                      +. ...++++++++|+| +|.+|++++|+|+.+|++ |++++++++. +.+.++|++.+++++... ...+.    + ++
T Consensus       152 l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~  228 (343)
T cd08236         152 VR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGA  228 (343)
T ss_pred             HH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhCCCCC
Confidence            84 78899999999997 699999999999999997 8888776654 777889998888876554 43332    2 29


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----C
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----D  314 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  314 (364)
                      |++|||+|+...+..++++|+++|+++.+|....           ...    .....+..++.+++++.+++...    .
T Consensus       229 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (343)
T cd08236         229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYG-----------DVT----LSEEAFEKILRKELTIQGSWNSYSAPFP  293 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCC-----------Ccc----cccCCHHHHHhcCcEEEEEeeccccccc
Confidence            9999999876688999999999999999985411           000    00001112346677877776531    1


Q ss_pred             HHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhc-CCCCCeEEE
Q 017901          315 AEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDK-RLIPGKVVL  361 (364)
Q Consensus       315 ~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~-~~~~gkvvi  361 (364)
                      .+.+++++++++++.+.  +.+.+.+++++++++++.+.+ +...+|+|+
T Consensus       294 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         294 GDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            56788899999999886  346788999999999999998 666778874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=7.1e-35  Score=271.33  Aligned_cols=327  Identities=27%  Similarity=0.454  Sum_probs=244.4

Q ss_pred             eeEEecccCCCceEEEcccccCCC-CCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |++++.+++++..++.. +.|.|. +.+++|+||+.++++|++|+..+.+....  ....|.++|+|++|+|+++|++++
T Consensus         2 ~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~V~~vG~~v~   78 (352)
T cd08247           2 KALTFKNNTSPLTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFH--FKVKEKGLGRDYSGVIVKVGSNVA   78 (352)
T ss_pred             ceEEEecCCCcceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccc--cccCCCccCceeEEEEEEeCcccc
Confidence            68899988888666666 666664 59999999999999999999887653211  112377899999999999999998


Q ss_pred             -CCCCCCEEEEecCCC-CCCCcceeEEeecCC----ccccCCCCCChhhhccccchHHHHHHHHHHhc-ccCCCCEEEEE
Q 017901          109 -SLTVGQEVFGALHPT-AVRGTYADYAVLSED----ELTPKPVSVTHADASAIPFAALTAWRALKCAA-RMSEGQRLLVL  181 (364)
Q Consensus       109 -~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~vli~  181 (364)
                       .|++||+|++..... ...|+|++|+.++..    .++++|+++++.+++.++.++.|||+++.+.. .+++|++++|+
T Consensus        79 ~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~  158 (352)
T cd08247          79 SEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVL  158 (352)
T ss_pred             cCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEE
Confidence             899999999875211 125899999999987    78999999999999999999999999987666 79999999999


Q ss_pred             cCCchHHHHHHHHHHHc-CC-eEEEeeCCccHHHHHHcCCceeeeCCChh---HHHHh------cCCccEEEECCCCchh
Q 017901          182 GGGGAVGFAAVQFSVAS-GC-HVSATCGSKSIDRVLAAGAEQAVDYSSKD---IELAI------KGKFDAVLDTIGAPET  250 (364)
Q Consensus       182 g~~g~~G~~~~~~a~~~-g~-~vi~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~i------~g~~D~vid~~g~~~~  250 (364)
                      |+++.+|++++++|+.+ |. .++++.+.++...++++|++++++++..+   +...+      .+.+|++|||+|+...
T Consensus       159 ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~  238 (352)
T cd08247         159 GGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDL  238 (352)
T ss_pred             CCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHH
Confidence            99999999999999987 44 67777665555677899999888876544   32221      1239999999999558


Q ss_pred             HHHHHhhcc---CCCEEEEEccCchhhhhccccccccc--hhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHH
Q 017901          251 ERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLP--IATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLS  325 (364)
Q Consensus       251 ~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (364)
                      ...++++++   ++|+++.+++....   .+......+  .... ...............+.........+.+..+++++
T Consensus       239 ~~~~~~~l~~~~~~G~~v~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (352)
T cd08247         239 FPHINSILKPKSKNGHYVTIVGDYKA---NYKKDTFNSWDNPSA-NARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELI  314 (352)
T ss_pred             HHHHHHHhCccCCCCEEEEEeCCCcc---cccchhhhhccccch-hhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHH
Confidence            889999999   99999987543100   000000000  0000 00000011223333444333322346788899999


Q ss_pred             HcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          326 ETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       326 ~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .++.+++.+++.|+++++++|++.+.+++..||+++++
T Consensus       315 ~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         315 ADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             hCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            99999887888999999999999999999889999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-35  Score=272.54  Aligned_cols=300  Identities=30%  Similarity=0.430  Sum_probs=240.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++..++ .+.++++ +.+.|+++++||+|++.++++|++|+..+.+..    ...+|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~   74 (325)
T cd08264           1 MKALVFEKSG-IENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVK   74 (325)
T ss_pred             CeeEEeccCC-CCceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCC
Confidence            6889998766 6678888 888888999999999999999999999877521    113577899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .|++||+|+.....                       ....|+|++|+.++.+.++++|+++++++++.+++++.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  154 (325)
T cd08264          75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA  154 (325)
T ss_pred             CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence            99999999976320                       0135899999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh--hHHHHhcCCccEEEE
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK--DIELAIKGKFDAVLD  243 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~i~g~~D~vid  243 (364)
                      +. .+++++|++++|+|++|.+|++++++|+.+|++|+++.+   .+.++++|++++++..+.  .+.....+ +|+++|
T Consensus       155 l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~d~vl~  229 (325)
T cd08264         155 LK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDEVEEKVKEITKM-ADVVIN  229 (325)
T ss_pred             HH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchHHHHHHHHHhCC-CCEEEE
Confidence            85 489999999999998899999999999999999988863   356678999888876531  12221234 999999


Q ss_pred             CCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHH
Q 017901          244 TIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR  323 (364)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (364)
                      ++|+. .+..++++++++|+++.+|....           ..      ..++...+..++..+.+.... .++.+.++++
T Consensus       230 ~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-----------~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  290 (325)
T cd08264         230 SLGSS-FWDLSLSVLGRGGRLVTFGTLTG-----------GE------VKLDLSDLYSKQISIIGSTGG-TRKELLELVK  290 (325)
T ss_pred             CCCHH-HHHHHHHhhccCCEEEEEecCCC-----------CC------CccCHHHHhhcCcEEEEccCC-CHHHHHHHHH
Confidence            99986 89999999999999999986310           00      111122344556667776543 4678888999


Q ss_pred             HHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEE
Q 017901          324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV  360 (364)
Q Consensus       324 ~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvv  360 (364)
                      ++...+  ..+++.|+++|+++|++.+.++...+|++
T Consensus       291 l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv~  325 (325)
T cd08264         291 IAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRIL  325 (325)
T ss_pred             HHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCccccC
Confidence            986443  45678899999999999999888777753

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2.3e-35  Score=273.61  Aligned_cols=302  Identities=24%  Similarity=0.255  Sum_probs=237.6

Q ss_pred             EEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccC-CccccCCCCCcccccceeEEEEeecCCCCCC
Q 017901           32 VVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-GRSIFEPLLPLILGRDISGEVAAVGASVRSL  110 (364)
Q Consensus        32 ~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~  110 (364)
                      .++..+   ..++++ +.+.|.|.++||+|++.++++|++|++.+.+. ...+ ....|.++|+|++|+|+++|+++++|
T Consensus         2 ~~~~~~---~~~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~   76 (343)
T cd05285           2 AVLHGP---GDLRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDF-VVKEPMVLGHESAGTVVAVGSGVTHL   76 (343)
T ss_pred             ceEecC---CceeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCccc-CCCCCcccCcceeEEEEeeCCCCCCC
Confidence            455533   458888 99999999999999999999999999876432 1111 12457789999999999999999999


Q ss_pred             CCCCEEEEec------------------------CCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHH
Q 017901          111 TVGQEVFGAL------------------------HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL  166 (364)
Q Consensus       111 ~~Gd~V~~~~------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l  166 (364)
                      ++||+|++..                        ......|+|++|++++.+.++++|+++++.+++.+ .++.+||+++
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~  155 (343)
T cd05285          77 KVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC  155 (343)
T ss_pred             CCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence            9999998621                        10013589999999999999999999999998876 5778999987


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhH---HHHhc-----C
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDI---ELAIK-----G  236 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~---~~~i~-----g  236 (364)
                       ..+.+++|++++|.| +|.+|++++|+|+.+|++ |+++.+++++ +.++++|++++++++..++   .+.+.     +
T Consensus       156 -~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  233 (343)
T cd05285         156 -RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGK  233 (343)
T ss_pred             -HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCC
Confidence             789999999999987 689999999999999997 8888766554 7778899999998776543   33332     2


Q ss_pred             CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHH
Q 017901          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE  316 (364)
Q Consensus       237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (364)
                      ++|++|||+|+...+..++++++++|+++.+|....           ...       .++.....+++.+.+++..  .+
T Consensus       234 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~-------~~~~~~~~~~~~~~~~~~~--~~  293 (343)
T cd05285         234 GPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-----------EVT-------LPLSAASLREIDIRGVFRY--AN  293 (343)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-----------CCc-------cCHHHHhhCCcEEEEeccC--hH
Confidence            399999999986588899999999999999985411           000       0111344566677666532  36


Q ss_pred             HHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCC-CCCeEEE
Q 017901          317 GLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRL-IPGKVVL  361 (364)
Q Consensus       317 ~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~-~~gkvvi  361 (364)
                      .++.+++++.++.+.  +.+.+.|+++++++|++.+.+++ ..+|++|
T Consensus       294 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         294 TYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             HHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            788899999999875  34678899999999999998875 4589987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=4.3e-35  Score=268.69  Aligned_cols=308  Identities=31%  Similarity=0.467  Sum_probs=253.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++.+++.++.+++. +.+.|.+.+++|+||+.++++|++|+....|..+.  ...+|.++|||++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~   77 (323)
T cd05276           1 MKAIVIKEPGGPEVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVT   77 (323)
T ss_pred             CeEEEEecCCCcccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCC
Confidence            789999988878888888 88888889999999999999999999998875432  224578999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      .+++||+|+++..    +|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.+.+.+.++++++|+|++|.+|
T Consensus        78 ~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig  153 (323)
T cd05276          78 GWKVGDRVCALLA----GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVG  153 (323)
T ss_pred             CCCCCCEEEEecC----CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHH
Confidence            9999999998753    489999999999999999999999999999999999999987778899999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCC
Q 017901          189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G  262 (364)
                      ++++++++..|++|+++.++++. +.+.++|++.+++....++...+.     +++|++||++|+. .+..++++++++|
T Consensus       154 ~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~g  232 (323)
T cd05276         154 TAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPDG  232 (323)
T ss_pred             HHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccCC
Confidence            99999999999999998876554 677888988888876655544432     2399999999987 6888999999999


Q ss_pred             EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC---------HHHHHHHHHHHHcCCceec
Q 017901          263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD---------AEGLEEIRRLSETGKLKIP  333 (364)
Q Consensus       263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~i~~~  333 (364)
                      +++.+|....        .   ..      ......++.+++++.+......         ...+.++++++.++++.+.
T Consensus       233 ~~i~~~~~~~--------~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (323)
T cd05276         233 RLVLIGLLGG--------A---KA------ELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPV  295 (323)
T ss_pred             EEEEEecCCC--------C---CC------CCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCC
Confidence            9999986411        0   00      0011123356777776654211         1345678888889999877


Q ss_pred             cceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          334 VDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      .++.|+++++++|++.+.++...+|+++
T Consensus       296 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         296 IDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             cceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            8899999999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=6.5e-35  Score=266.08  Aligned_cols=308  Identities=39%  Similarity=0.642  Sum_probs=253.8

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |+++++..++..+.+.++ +.+.|.++++||+|++.++++|++|+..+.|..........|..+|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~   79 (309)
T cd05289           1 MKAVRIHEYGGPEVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT   79 (309)
T ss_pred             CceEEEcccCCccceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence            688999887777677888 8888889999999999999999999999888643222334588999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      .+++||+|+++... ...|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+.+|++++|+|++|.+|
T Consensus        80 ~~~~G~~V~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g  158 (309)
T cd05289          80 GFKVGDEVFGMTPF-TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVG  158 (309)
T ss_pred             CCCCCCEEEEccCC-CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHH
Confidence            99999999998621 11389999999999999999999999999999999999999987777799999999999889999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901          189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~  267 (364)
                      ++++++++..|++|++++++++.+.++++|++.+++....++..... +.+|+++||+|+. ....++++++++|+++.+
T Consensus       159 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~  237 (309)
T cd05289         159 SFAVQLAKARGARVIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSI  237 (309)
T ss_pred             HHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEE
Confidence            99999999999999998876655777889988888766554443111 2399999999998 889999999999999999


Q ss_pred             ccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHH
Q 017901          268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAH  347 (364)
Q Consensus       268 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~  347 (364)
                      |....            ..    .      ....+++.+......+....+.+++++++++.+.+.+++.|+++++++|+
T Consensus       238 g~~~~------------~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  295 (309)
T cd05289         238 AGPPP------------AE----Q------AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAH  295 (309)
T ss_pred             cCCCc------------ch----h------hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHH
Confidence            86411            00    0      12334555555544333678899999999999988888999999999999


Q ss_pred             HHHhcCCCCCeEEE
Q 017901          348 EAKDKRLIPGKVVL  361 (364)
Q Consensus       348 ~~~~~~~~~gkvvi  361 (364)
                      +.+.++...+|+++
T Consensus       296 ~~~~~~~~~~kvv~  309 (309)
T cd05289         296 ERLESGHARGKVVL  309 (309)
T ss_pred             HHHHhCCCCCcEeC
Confidence            99998888788874

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=4.2e-35  Score=271.66  Aligned_cols=309  Identities=26%  Similarity=0.324  Sum_probs=240.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||+++++.+++  .+++. +.+.|.|.++|++||++++++|++|+..+.+..........|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~   77 (341)
T cd05281           1 MKAIVKTKAGP--GAELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT   77 (341)
T ss_pred             CcceEEecCCC--ceEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence            68899997665  48888 9999999999999999999999999988654210011123567899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .+++||+|++....                       ....|+|++|++++.+.++++|++++.+ +++++..+.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~~  156 (341)
T cd05281          78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVHT  156 (341)
T ss_pred             CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHHH
Confidence            99999999885210                       0025899999999999999999999985 44666777888887


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKF  238 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~  238 (364)
                      +.  ....+|++|+|.| +|.+|++++|+|+.+|+ +|+++.+++++ ..++++|++++++++..++. .+.     +++
T Consensus       157 ~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~v  232 (341)
T cd05281         157 VL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVTDGTGV  232 (341)
T ss_pred             HH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHcCCCCC
Confidence            74  4567899999987 69999999999999999 68888555544 67789999888887665554 433     249


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHH
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL  318 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (364)
                      |++|||+|+......++++|+++|+++.+|....            ..    .+.. ......+++.+.+.......+.+
T Consensus       233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~  295 (341)
T cd05281         233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG------------PV----DIDL-NNLVIFKGLTVQGITGRKMFETW  295 (341)
T ss_pred             CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC------------Cc----cccc-chhhhccceEEEEEecCCcchhH
Confidence            9999999987688999999999999999986411            10    0000 01244566677666543334667


Q ss_pred             HHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          319 EEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       319 ~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ..+++++.++.+.+  .+.+.++++++++||+.+.+++ .||+|+++
T Consensus       296 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         296 YQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             HHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            88999999999863  4678899999999999999988 89999864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3.6e-35  Score=272.62  Aligned_cols=304  Identities=22%  Similarity=0.250  Sum_probs=241.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      ||+++++.+   +.+++. +.|.|.| .++||+||+.++++|++|+..+.|..+.    ..|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~---~~~~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~----~~~~~~g~e~~G~V~~vG~~v   72 (345)
T cd08287           1 MRATVIHGP---GDIRVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT----RAPAPIGHEFVGVVEEVGSEV   72 (345)
T ss_pred             CceeEEecC---CceeEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC----CCCcccccceEEEEEEeCCCC
Confidence            689999843   358899 9999986 8999999999999999999998886432    357899999999999999999


Q ss_pred             CCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhc-----cccc
Q 017901          108 RSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADAS-----AIPF  157 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~  157 (364)
                      ..+++||+|++....                       ...+|+|++|+.++.+  .++++|+++++..+.     ++..
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~  152 (345)
T cd08287          73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD  152 (345)
T ss_pred             CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence            999999999872110                       0134899999999975  899999999872211     2235


Q ss_pred             hHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc
Q 017901          158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK  235 (364)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~  235 (364)
                      .+.+||+++ ..+.+++|++++|.| +|.+|++++|+|+..|++ ++++.+++.+ +.++++|++.++++...++.+.+.
T Consensus       153 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~  230 (345)
T cd08287         153 VMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVR  230 (345)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHH
Confidence            678999998 578899999999977 899999999999999996 6676666544 778899999999987766555443


Q ss_pred             -----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901          236 -----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY  310 (364)
Q Consensus       236 -----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (364)
                           ..+|+++||+|+...+..++++++++|+++.+|....            ..    .  +.....+.+++++.+..
T Consensus       231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------------~~----~--~~~~~~~~~~~~~~~~~  292 (345)
T cd08287         231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------------GV----E--LDVRELFFRNVGLAGGP  292 (345)
T ss_pred             HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------------CC----c--cCHHHHHhcceEEEEec
Confidence                 1399999999986689999999999999999986510            00    0  11112356777777654


Q ss_pred             eccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          311 MRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       311 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .. ..+.+.++++++.++.+++  .+++.|+++++++|++.+.++.. .|++|+
T Consensus       293 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         293 AP-VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             CC-cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence            22 4678999999999999886  36789999999999999887765 499986

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=6.8e-35  Score=270.11  Aligned_cols=300  Identities=25%  Similarity=0.351  Sum_probs=237.4

Q ss_pred             CCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhc-cCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEE
Q 017901           39 GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS-GYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVF  117 (364)
Q Consensus        39 ~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~  117 (364)
                      +.++++++ +.+.|.+.++||+||+.++++|++|+..+. |..+. ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus         5 ~~~~~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~-~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~   82 (339)
T cd08232           5 AAGDLRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGT-VRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVA   82 (339)
T ss_pred             cCCceEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCc-ccccCCeecCccceEEEEeeCCCCCcCCCCCEEE
Confidence            45678999 999999999999999999999999998764 32211 1224578999999999999999999999999998


Q ss_pred             EecCC----------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHh
Q 017901          118 GALHP----------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA  169 (364)
Q Consensus       118 ~~~~~----------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~  169 (364)
                      +....                            ...+|+|++|+.++.+.++++|+++++.+++. ..++.+||+++...
T Consensus        83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~  161 (339)
T cd08232          83 VNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRA  161 (339)
T ss_pred             EccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhc
Confidence            73210                            01358999999999999999999999998875 56788999998665


Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--CCccEEEECC
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTI  245 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~  245 (364)
                      ... ++++|+|.| +|.+|++++|+|+.+|+ +++++.+++++ ++++++|++++++++..++.....  +++|+++||+
T Consensus       162 ~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~  239 (339)
T cd08232         162 GDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEAS  239 (339)
T ss_pred             CCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECC
Confidence            555 999999987 79999999999999999 78888776554 677889999999876654322221  2399999999


Q ss_pred             CCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHH
Q 017901          246 GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLS  325 (364)
Q Consensus       246 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (364)
                      |+...+...+++|+++|+++.+|....            ..    .  ........+++++.+...  ..+.++.+++++
T Consensus       240 g~~~~~~~~~~~L~~~G~~v~~g~~~~------------~~----~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  299 (339)
T cd08232         240 GAPAALASALRVVRPGGTVVQVGMLGG------------PV----P--LPLNALVAKELDLRGSFR--FDDEFAEAVRLL  299 (339)
T ss_pred             CCHHHHHHHHHHHhcCCEEEEEecCCC------------Cc----c--CcHHHHhhcceEEEEEec--CHHHHHHHHHHH
Confidence            975588999999999999999986410            11    0  001123456677777653  356788999999


Q ss_pred             HcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          326 ETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       326 ~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++.+++  .+.+.|+++++++|++.+.++...||+|+++
T Consensus       300 ~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         300 AAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            9998864  3778999999999999999888889999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=4.7e-35  Score=270.01  Aligned_cols=310  Identities=24%  Similarity=0.277  Sum_probs=243.1

Q ss_pred             eeeEEecccC----CCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           29 CRAVVLPRFG----GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        29 ~~a~~~~~~g----~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      .++|.++..+    +++.+.++ +.+.|.+.+++|+||+.++++|++|+....+......+...+.++|+|++|+|+++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G   80 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESR   80 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecC
Confidence            4677777655    56889999 999999999999999999999998876665532111122235678999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEeecC-CccccCCCCCC--hhhhcc-ccchHHHHHHHHHHhcccCCCCEEEE
Q 017901          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE-DELTPKPVSVT--HADASA-IPFAALTAWRALKCAARMSEGQRLLV  180 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~vli  180 (364)
                      ++  ++++||+|+.+       ++|++|+.++. +.++++|++++  +.+++. +++++.|||+++.....+.++++++|
T Consensus        81 ~~--~~~~Gd~V~~~-------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI  151 (329)
T cd05288          81 SP--DFKVGDLVSGF-------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV  151 (329)
T ss_pred             CC--CCCCCCEEecc-------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE
Confidence            65  79999999986       57999999999 99999999985  445555 88899999999877788999999999


Q ss_pred             EcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-cCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHH
Q 017901          181 LGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLG  254 (364)
Q Consensus       181 ~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~  254 (364)
                      +|++|.+|++++++|+..|++|+++++++++ +.+++ +|+++++++.+.++...+.    +++|++|||+|+. .+..+
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~  230 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE-ILDAA  230 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH-HHHHH
Confidence            9999999999999999999999999876654 66777 9999899887665554433    2399999999986 89999


Q ss_pred             HhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC----HHHHHHHHHHHHcCCc
Q 017901          255 LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD----AEGLEEIRRLSETGKL  330 (364)
Q Consensus       255 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~i  330 (364)
                      +++++++|+++.+|....           ........ .........+++++.++.....    .+.+.++++++.++.+
T Consensus       231 ~~~l~~~G~~v~~g~~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  298 (329)
T cd05288         231 LTLLNKGGRIALCGAISQ-----------YNATEPPG-PKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKL  298 (329)
T ss_pred             HHhcCCCceEEEEeeccC-----------cccccccc-cccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCc
Confidence            999999999999986411           00000000 0001123456777777664322    2467888999999999


Q ss_pred             eeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          331 KIPVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       331 ~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      ++.....++++++++|++.+.+++..||+++
T Consensus       299 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         299 KYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             cccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            8766667999999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=1.2e-34  Score=266.18  Aligned_cols=313  Identities=32%  Similarity=0.443  Sum_probs=254.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++..++.+..+.+. +.+.|.+.+++|+|++.++++|++|+....|..+.  ....|+++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~   77 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVD   77 (325)
T ss_pred             CceEEEcccCCcccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCC
Confidence            688888877777778898 99999999999999999999999999988875432  225688999999999999999999


Q ss_pred             CCCCCCEEEEecCCC-CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          109 SLTVGQEVFGALHPT-AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      +|++||+|+...... ...|+|++|+.++.+.++++|+++++.+++.+++++.+||+++...+.+.+|++++|+|+++.+
T Consensus        78 ~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~  157 (325)
T cd08253          78 GLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAV  157 (325)
T ss_pred             CCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchH
Confidence            999999999986211 1258999999999999999999999999999999999999998777899999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      |++++++++..|++|+++++++++ +.+.++|++++++....++...+.     +++|+++||+|+. .....+++++++
T Consensus       158 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~  236 (325)
T cd08253         158 GHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG  236 (325)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC
Confidence            999999999999999999876654 777889998888876655544432     2399999999997 788899999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-C----HHHHHHHHHHHHcCCceeccce
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-D----AEGLEEIRRLSETGKLKIPVDK  336 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~g~i~~~~~~  336 (364)
                      |+++.+|....            ..    .  .....+..++.++.+..... .    .+.++.+.+++.++.+++..++
T Consensus       237 g~~v~~~~~~~------------~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  298 (325)
T cd08253         237 GRIVVYGSGGL------------RG----T--IPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAR  298 (325)
T ss_pred             CEEEEEeecCC------------cC----C--CChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCcccc
Confidence            99999986410            00    0  00001234555665544321 1    2355666778888888877888


Q ss_pred             eeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          337 TFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .|++++++++++.+.++...||+++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         299 EYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             EEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            999999999999999988889999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=1.2e-34  Score=266.66  Aligned_cols=311  Identities=23%  Similarity=0.277  Sum_probs=245.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||++++++|+++.++++ +.|.|.|+++||+|++.++++|++|+..+.|..+.  ...+|.++|||++|+|++  ++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~   75 (324)
T cd08288           1 FKALVLEKDDGGTSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSP   75 (324)
T ss_pred             CeeEEEeccCCCcceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCC
Confidence            789999998887789999 99999999999999999999999999988885421  123577899999999998  6777


Q ss_pred             CCCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHH--HhcccC-CCCEEEEEcC
Q 017901          109 SLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK--CAARMS-EGQRLLVLGG  183 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~vli~g~  183 (364)
                      ++++||+|+++...  ....|+|++|+.++.+.++++|+++++++++.++..+++|+.++.  +..... ++++++|+|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga  155 (324)
T cd08288          76 RFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGA  155 (324)
T ss_pred             CCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECC
Confidence            89999999986410  012589999999999999999999999999999999999987653  123445 6789999998


Q ss_pred             CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHH-HHh-cCCccEEEECCCCchhHHHHHhhccC
Q 017901          184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIE-LAI-KGKFDAVLDTIGAPETERLGLNFLKR  260 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~-~~i-~g~~D~vid~~g~~~~~~~~~~~l~~  260 (364)
                      +|.+|++++|+|+.+|++|++++.++++ +.++++|+++++++++.+.. ..+ .+++|.+||++|+. .+..++..++.
T Consensus       156 ~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~  234 (324)
T cd08288         156 AGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRY  234 (324)
T ss_pred             CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcC
Confidence            8999999999999999999998765554 77899999999887653321 111 12388999999986 77788899999


Q ss_pred             CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----CHHHHHHHHHHHHcCCceeccc
Q 017901          261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----DAEGLEEIRRLSETGKLKIPVD  335 (364)
Q Consensus       261 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~i~~~~~  335 (364)
                      +|+++.+|....           .+..      .....+..+++++.+.....     ..+.+..+.+++.++.+.+ +.
T Consensus       235 ~g~~~~~G~~~~-----------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~  296 (324)
T cd08288         235 GGAVAACGLAGG-----------ADLP------TTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LT  296 (324)
T ss_pred             CCEEEEEEecCC-----------CCCC------cchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cc
Confidence            999999986410           0110      01112336677877764311     1345677778888888876 57


Q ss_pred             eeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          336 KTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       336 ~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +.|+++++++|++.+.+++..+|+++++
T Consensus       297 ~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         297 REIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             eeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            8999999999999999999999999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=7.7e-35  Score=268.61  Aligned_cols=302  Identities=26%  Similarity=0.281  Sum_probs=245.5

Q ss_pred             eeeEEecccCCC--ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           29 CRAVVLPRFGGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        29 ~~a~~~~~~g~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      |+++++.+++.+  ..+++. +.+.|.+.++||+||+.++++|++|+..+.|..+.   ...|.++|||++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~   76 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPG   76 (329)
T ss_pred             CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCC
Confidence            688999877742  357787 88888899999999999999999999999886532   245889999999999999999


Q ss_pred             CCCCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH
Q 017901          107 VRSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (364)
                      ++++++||+|.....                        ....+|+|++|+.++.+.++++|+++++.+++.+++++.||
T Consensus        77 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta  156 (329)
T cd08298          77 VTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG  156 (329)
T ss_pred             CCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence            999999999986310                        00135899999999999999999999999999999999999


Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEE
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAV  241 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~v  241 (364)
                      |+++ +.++++++++++|+| +|.+|++++++++..|++|+++++++++ +.++++|++.+++.+...    -.+ +|++
T Consensus       157 ~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~-vD~v  229 (329)
T cd08298         157 YRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDLP----PEP-LDAA  229 (329)
T ss_pred             HHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCccC----CCc-ccEE
Confidence            9998 889999999999997 7999999999999999999999776654 778899998877765321    124 9999


Q ss_pred             EECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHH
Q 017901          242 LDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEI  321 (364)
Q Consensus       242 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (364)
                      +++.+....+..++++++++|+++.+|....           ...    .  +++ .....+..+.+.... ..+.+..+
T Consensus       230 i~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~----~--~~~-~~~~~~~~i~~~~~~-~~~~~~~~  290 (329)
T cd08298         230 IIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----------DIP----A--FDY-ELLWGEKTIRSVANL-TRQDGEEF  290 (329)
T ss_pred             EEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----------CCC----c--cch-hhhhCceEEEEecCC-CHHHHHHH
Confidence            9997766689999999999999998874310           000    0  011 113345556555432 46778899


Q ss_pred             HHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       322 ~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      +++++++.+++. ++.|+++++++|++.+.+++..||+|+
T Consensus       291 ~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         291 LKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            999999988874 689999999999999999999899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-34  Score=267.50  Aligned_cols=321  Identities=29%  Similarity=0.448  Sum_probs=249.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      .|++.+.+.+.+..+++. +.+.|.|.+++|+|++.++++|++|+..+.|..+..  ..+|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~   77 (331)
T cd08273           1 NREVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVT   77 (331)
T ss_pred             CeeEEEccCCCcccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCc
Confidence            378999998888889999 999999999999999999999999999988865322  24688999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      .|++||+|.++..    .|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.+.+.+.+|++++|+|++|.+|
T Consensus        78 ~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig  153 (331)
T cd08273          78 GFEVGDRVAALTR----VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVG  153 (331)
T ss_pred             cCCCCCEEEEeCC----CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH
Confidence            9999999999853    389999999999999999999999999999999999999987778899999999999889999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH-hc-CCccEEEECCCCchhHHHHHhhccCCCEEEE
Q 017901          189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA-IK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMT  266 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~  266 (364)
                      ++++++|+..|++|+++++.++.+.++++|+.. ++....++... .. +.+|+++||+|+. .+..++++++++|+++.
T Consensus       154 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~  231 (331)
T cd08273         154 QALLELALLAGAEVYGTASERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGE-SYEESYAALAPGGTLVC  231 (331)
T ss_pred             HHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchH-HHHHHHHHhcCCCEEEE
Confidence            999999999999999998733347778888753 44443333321 22 2399999999998 68899999999999999


Q ss_pred             EccCchhhhhccccccccchhhH-HHHHHhhhhhhccceeEEEEEec------cCHHHHHHHHHHHHcCCceeccceeec
Q 017901          267 LHGETAALADHYGLALGLPIATT-VLLKKRMQTWYSYGIDYSYIYMR------ADAEGLEEIRRLSETGKLKIPVDKTFH  339 (364)
Q Consensus       267 ~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~  339 (364)
                      +|..........   ...+..+. ............++..+.+....      ...+.+..++++++++.+.+.+.+.|+
T Consensus       232 ~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~  308 (331)
T cd08273         232 YGGNSSLLQGRR---SLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLP  308 (331)
T ss_pred             EccCCCCCCccc---cccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEc
Confidence            986521000000   00000000 00000000112223333332221      013578889999999999888888999


Q ss_pred             cccHHHHHHHHhcCCCCCeEEE
Q 017901          340 MTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       340 l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      ++++++|++.+.++...||+|+
T Consensus       309 ~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         309 LSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHHHHHHHcCCCcceEEe
Confidence            9999999999998888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=2e-34  Score=269.36  Aligned_cols=309  Identities=21%  Similarity=0.263  Sum_probs=236.3

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ..|+++++.   +++.++++ +.+.|.+.++||+||+.++++|++|++.+.+.........+|+++|||++|+|+++|++
T Consensus        16 ~~~~~~~~~---~~~~l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
T PLN02702         16 EENMAAWLV---GVNTLKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSE   91 (364)
T ss_pred             cccceEEEe---cCCceEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCC
Confidence            344555555   33558888 88888899999999999999999999988763221112235789999999999999999


Q ss_pred             CCCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH
Q 017901          107 VRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (364)
                      ++.|++||+|++....                        ....|+|++|+.++.+.++++|+++++.+++.. .+..++
T Consensus        92 v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a  170 (364)
T PLN02702         92 VKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVG  170 (364)
T ss_pred             CCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHH
Confidence            9999999999873210                        012589999999999999999999999988753 234468


Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCC--ChhHHHHh----
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYS--SKDIELAI----  234 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~--~~~~~~~i----  234 (364)
                      |+++ ...++.+|++++|+| +|.+|++++++|+.+|++ ++++.+++.+ +.++++|+++++++.  ..++.+.+    
T Consensus       171 ~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  248 (364)
T PLN02702        171 VHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQ  248 (364)
T ss_pred             HHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHh
Confidence            8887 678899999999997 799999999999999996 5555544443 778899998877643  23333322    


Q ss_pred             ---cCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEe
Q 017901          235 ---KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYM  311 (364)
Q Consensus       235 ---~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                         .+++|++|||+|+...+..++++++++|+++.+|...           + ...      ........+++++.+++.
T Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-----------~-~~~------~~~~~~~~~~~~i~~~~~  310 (364)
T PLN02702        249 KAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGH-----------N-EMT------VPLTPAAAREVDVVGVFR  310 (364)
T ss_pred             hhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCC-----------C-CCc------ccHHHHHhCccEEEEecc
Confidence               1249999999997658999999999999999998641           0 110      011134566778877664


Q ss_pred             ccCHHHHHHHHHHHHcCCce--eccceeecc--ccHHHHHHHHhcCCCCCeEEEE
Q 017901          312 RADAEGLEEIRRLSETGKLK--IPVDKTFHM--TQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       312 ~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l--~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .  ...+..++++++++.+.  +.+++.|++  +++++|++.+.+++..+|+|+.
T Consensus       311 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        311 Y--RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             C--hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            2  45788899999999886  346778655  7999999999988888899985

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=2.3e-34  Score=263.52  Aligned_cols=307  Identities=30%  Similarity=0.443  Sum_probs=250.6

Q ss_pred             eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~  109 (364)
                      +|+.+..++.+..+.+. +.+.|.+.++||+|++.++++|++|+....+..+.    .+|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~----~~~~~~g~e~~G~v~~~g~~~~~   75 (320)
T cd05286           1 KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL----PLPFVLGVEGAGVVEAVGPGVTG   75 (320)
T ss_pred             CeEEEecCCCccceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC----CCCccCCcceeEEEEEECCCCCC
Confidence            46777777777778888 77777889999999999999999999998885432    45778999999999999999999


Q ss_pred             CCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHH
Q 017901          110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF  189 (364)
Q Consensus       110 ~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~  189 (364)
                      +++||+|+++.    ..|+|++|+.++.+.++++|++++..+++.++...+++|+++.+...+.+|++++|+|++|.+|+
T Consensus        76 ~~~G~~V~~~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~  151 (320)
T cd05286          76 FKVGDRVAYAG----PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGL  151 (320)
T ss_pred             CCCCCEEEEec----CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHH
Confidence            99999999985    13899999999999999999999999999999999999999877889999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCE
Q 017901          190 AAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGH  263 (364)
Q Consensus       190 ~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~  263 (364)
                      +++++++.+|++|+++++++++ +.++++|++++++....++.+.+.     ..+|+++||+|+. ....++++++++|+
T Consensus       152 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~  230 (320)
T cd05286         152 LLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPRGT  230 (320)
T ss_pred             HHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccCcE
Confidence            9999999999999999876654 777889998888876655544443     1399999999986 88999999999999


Q ss_pred             EEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec---cC----HHHHHHHHHHHHcCCceeccce
Q 017901          264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR---AD----AEGLEEIRRLSETGKLKIPVDK  336 (364)
Q Consensus       264 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~g~i~~~~~~  336 (364)
                      ++.+|....            ...   .+.  ...+..+++++.+....   ..    .+.+..+++++.++.+.+..++
T Consensus       231 ~v~~g~~~~------------~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (320)
T cd05286         231 LVSFGNASG------------PVP---PFD--LLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGK  293 (320)
T ss_pred             EEEEecCCC------------CCC---ccC--HHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccc
Confidence            999986411            000   000  00122556666543321   11    2345678889999998877888


Q ss_pred             eeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          337 TFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .|+++++++|++.+.++...+|+++++
T Consensus       294 ~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         294 RYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             eEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999999999999988889999864

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=1.2e-34  Score=268.53  Aligned_cols=303  Identities=25%  Similarity=0.321  Sum_probs=235.0

Q ss_pred             ccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCE
Q 017901           36 RFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQE  115 (364)
Q Consensus        36 ~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~  115 (364)
                      .++.+  ++++ +.|.|.|.++||+|++.++++|++|+..+.+.........+|.++|+|++|+|+++|+++++|++||+
T Consensus         6 ~~~~~--~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   82 (340)
T TIGR00692         6 KPGYG--AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDY   82 (340)
T ss_pred             cCCCC--cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCE
Confidence            34444  7888 99999999999999999999999999987553111112245778999999999999999999999999


Q ss_pred             EEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhccc
Q 017901          116 VFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM  172 (364)
Q Consensus       116 V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~  172 (364)
                      |++....                       ....|+|++|++++.+.++++|++++..++ +++..+.+|++++  ....
T Consensus        83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~  159 (340)
T TIGR00692        83 VSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGP  159 (340)
T ss_pred             EEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccC
Confidence            9884211                       003589999999999999999999998644 5677788999876  3457


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTI  245 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~  245 (364)
                      .+|++++|.| +|.+|++++|+|+.+|++ |+++.+++++ +.++++|++.++++...++.+.+.     .++|++|||+
T Consensus       160 ~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~  238 (340)
T TIGR00692       160 ISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMS  238 (340)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECC
Confidence            8999999977 799999999999999997 7777555544 677889998888877666655442     2399999999


Q ss_pred             CCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHH
Q 017901          246 GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLS  325 (364)
Q Consensus       246 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (364)
                      |+...+..++++++++|+++.+|....          ..+. .+.      ..+..+++.+.+.......+.+.++++++
T Consensus       239 g~~~~~~~~~~~l~~~g~~v~~g~~~~----------~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  301 (340)
T TIGR00692       239 GAPKALEQGLQAVTPGGRVSLLGLPPG----------KVTI-DFT------NKVIFKGLTIYGITGRHMFETWYTVSRLI  301 (340)
T ss_pred             CCHHHHHHHHHhhcCCCEEEEEccCCC----------Cccc-chh------hhhhhcceEEEEEecCCchhhHHHHHHHH
Confidence            976688999999999999999986410          0000 010      12344566666655332345678899999


Q ss_pred             HcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          326 ETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       326 ~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++++  +.+.+.|++++++++++.+.+++. ||+|+++
T Consensus       302 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       302 QSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             HcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            999987  457889999999999999988875 9999875

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.6e-34  Score=267.02  Aligned_cols=303  Identities=24%  Similarity=0.340  Sum_probs=243.7

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++   .+++. +.+.|++.++||+||++++++|+.|+....|..+.    .+|.++|+|++|+|+++|++++
T Consensus         1 ~~a~~~~~~~---~~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~----~~p~~~g~~~~G~v~~vG~~v~   72 (334)
T cd08234           1 MKALVYEGPG---ELEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA----APPLVPGHEFAGVVVAVGSKVT   72 (334)
T ss_pred             CeeEEecCCC---ceEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC----CCCcccccceEEEEEEeCCCCC
Confidence            6899998655   58888 99999999999999999999999999999886532    3678999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      .+++||+|++....                       ....|+|++|+.++.+.++++|+++++.+++.+ ..+.+++++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  151 (334)
T cd08234          73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG  151 (334)
T ss_pred             CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence            99999999872110                       013589999999999999999999999988766 677899999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHH--hc-CCccE
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELA--IK-GKFDA  240 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~--i~-g~~D~  240 (364)
                      + ..+++++|++++|+| +|.+|.+++++|+..|++ |+++.+++++ +.++++|++.++++...+....  .. +++|+
T Consensus       152 l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~  229 (334)
T cd08234         152 L-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDV  229 (334)
T ss_pred             H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcE
Confidence            8 788999999999997 699999999999999997 7777666554 7778899988888765543322  11 23999


Q ss_pred             EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE  320 (364)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (364)
                      +|||+|+...+..++++++++|+++.+|....          ....      .........+++++.+...  ....+++
T Consensus       230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----------~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~~  291 (334)
T cd08234         230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAP----------DARV------SISPFEIFQKELTIIGSFI--NPYTFPR  291 (334)
T ss_pred             EEECCCChHHHHHHHHHHhcCCEEEEEecCCC----------CCCc------ccCHHHHHhCCcEEEEecc--CHHHHHH
Confidence            99999876688899999999999999986511          0000      0011122346677777654  3567889


Q ss_pred             HHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          321 IRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       321 ~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      ++++++++++++  .+++.|+++++++|++.+.+ ...+|+|+
T Consensus       292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         292 AIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            999999999875  36788999999999999998 77789986

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.8e-34  Score=271.31  Aligned_cols=310  Identities=20%  Similarity=0.264  Sum_probs=237.5

Q ss_pred             ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc----ccCCCCCcccccceeEEEE
Q 017901           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS----IFEPLLPLILGRDISGEVA  101 (364)
Q Consensus        26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~  101 (364)
                      -+.+...++..  .  .++++ +.|.|.++++||+|++.++++|++|++.+.+....    .....+|.++|||++|+|+
T Consensus        26 ~~~~~~~~~~~--~--~~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~  100 (384)
T cd08265          26 LTNLGSKVWRY--P--ELRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVE  100 (384)
T ss_pred             hccceeEEEeC--C--CEEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEE
Confidence            34455556662  1  38999 99999999999999999999999999988632100    0113567899999999999


Q ss_pred             eecCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCC-------Chhh
Q 017901          102 AVGASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSV-------THAD  151 (364)
Q Consensus       102 ~vG~~~~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~-------~~~~  151 (364)
                      ++|++++.|++||+|++....                       ...+|+|++|+.++.+.++++|+++       +.. 
T Consensus       101 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-  179 (384)
T cd08265         101 KTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-  179 (384)
T ss_pred             EECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-
Confidence            999999999999999862110                       0126899999999999999999864       444 


Q ss_pred             hccccchHHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCCh
Q 017901          152 ASAIPFAALTAWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSK  228 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~  228 (364)
                      +++++.++++||+++... +.+++|++|+|+| +|.+|++++++|+..|+ +|+++.+++++ +.++++|+++++++...
T Consensus       180 ~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~  258 (384)
T cd08265         180 AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKM  258 (384)
T ss_pred             HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccc
Confidence            666777888999998655 6899999999996 79999999999999999 78888766554 77899999988887632


Q ss_pred             ---hHHHHhc----C-CccEEEECCCCc-hhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhh
Q 017901          229 ---DIELAIK----G-KFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW  299 (364)
Q Consensus       229 ---~~~~~i~----g-~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (364)
                         ++.+.+.    + .+|+|+||+|+. ..+..++++|+++|+++.+|....            ..      .+.....
T Consensus       259 ~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~  320 (384)
T cd08265         259 RDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------------TV------PLHLEVL  320 (384)
T ss_pred             ccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------------CC------cccHHHH
Confidence               4444443    1 399999999973 367899999999999999985411            00      0011134


Q ss_pred             hccceeEEEEEeccCHHHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          300 YSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      ..+..++.+.+.......+.+++++++++.+++.  +++.|+++++++|++.+.++ ..+|+|+
T Consensus       321 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         321 QVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             hhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            4455667766543234578899999999999863  67889999999999997665 5688885

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.9e-34  Score=261.91  Aligned_cols=313  Identities=31%  Similarity=0.421  Sum_probs=251.0

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++....++++ +.|.|.+.+++|+|++.++++|++|+....+....+   ..|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~---~~~~~~g~e~~G~v~~~G~~~~   76 (325)
T cd08271           1 MKAWVLPKPGAALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW---SYPHVPGVDGAGVVVAVGAKVT   76 (325)
T ss_pred             CeeEEEccCCCcceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC---CCCcccccceEEEEEEeCCCCC
Confidence            789999977753479999 999999999999999999999999999887754221   2367899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      .+++||+|.++.... ..|+|++|+.++.+.++++|++++..+++.+.+.+.+||+++.+.+.+.+|++++|+|+++.+|
T Consensus        77 ~~~~Gd~V~~~~~~~-~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig  155 (325)
T cd08271          77 GWKVGDRVAYHASLA-RGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVG  155 (325)
T ss_pred             cCCCCCEEEeccCCC-CCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHH
Confidence            999999999985211 2489999999999999999999999999999999999999998888999999999999889999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCE
Q 017901          189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGH  263 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~  263 (364)
                      ++++++++..|++|++++++++.+.+.++|++.+++....++...+.     ..+|++++|+++. ....++++++++|+
T Consensus       156 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~  234 (325)
T cd08271         156 SFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFNGH  234 (325)
T ss_pred             HHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccCCE
Confidence            99999999999999988754445777889998888876655444333     1399999999997 66789999999999


Q ss_pred             EEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-------CHHHHHHHHHHHHcCCceeccce
Q 017901          264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-------DAEGLEEIRRLSETGKLKIPVDK  336 (364)
Q Consensus       264 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~i~~~~~~  336 (364)
                      ++.++....          ....   ..   .......+++.+...+...       ..+.+.++++++.++.+.+..++
T Consensus       235 ~v~~~~~~~----------~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  298 (325)
T cd08271         235 LVCIQGRPD----------ASPD---PP---FTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIE  298 (325)
T ss_pred             EEEEcCCCC----------Ccch---hH---HhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccce
Confidence            999975411          0000   01   0112333444444432211       12456778899999999887778


Q ss_pred             eeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          337 TFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .|+++++.+|++.+.++...+|+++++
T Consensus       299 ~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         299 VLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             EEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            999999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-34  Score=263.57  Aligned_cols=294  Identities=25%  Similarity=0.327  Sum_probs=235.3

Q ss_pred             CceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhh-ccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEE
Q 017901           40 PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFG  118 (364)
Q Consensus        40 ~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~  118 (364)
                      ++.++++ +++.|++.++||+|++.++++|++|+..+ .|..... ...+|.++|+|++|+|+++|++++++++||+|++
T Consensus         4 ~~~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           4 PGRFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             CCeeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            4568999 99999999999999999999999999987 6643211 1235789999999999999999999999999999


Q ss_pred             ecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc
Q 017901          119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS  198 (364)
Q Consensus       119 ~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~  198 (364)
                      +..     |+|++|+.++.+.++++|+++  ..++....++.++++++. ..+++++++++|+| +|.+|++++++|+..
T Consensus        82 ~~~-----g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~  152 (312)
T cd08269          82 LSG-----GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAA  152 (312)
T ss_pred             ecC-----CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence            865     899999999999999999998  222222367789999985 78899999999997 799999999999999


Q ss_pred             CCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCc
Q 017901          199 GCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (364)
Q Consensus       199 g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (364)
                      |++ |+++.+.+++ +++.++|++++++.+..++.+.+.     .++|+++||+|+......++++++++|+++.+|...
T Consensus       153 g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~  232 (312)
T cd08269         153 GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQ  232 (312)
T ss_pred             CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCC
Confidence            998 8888776654 778899998888876655555443     139999999987668899999999999999998641


Q ss_pred             hhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc---CHHHHHHHHHHHHcCCcee--ccceeeccccHHHH
Q 017901          272 AALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA---DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREA  346 (364)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA  346 (364)
                      .           .+.      .........+++.+.++....   ..+.++.++++++++.+.+  .+.+.|+++++++|
T Consensus       233 ~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a  295 (312)
T cd08269         233 D-----------GPR------PVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDA  295 (312)
T ss_pred             C-----------CCc------ccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHH
Confidence            0           011      011113455666666665321   2468899999999999986  36788999999999


Q ss_pred             HHHHhcCCC-CCeEEE
Q 017901          347 HEAKDKRLI-PGKVVL  361 (364)
Q Consensus       347 ~~~~~~~~~-~gkvvi  361 (364)
                      ++.+.+++. .+|+++
T Consensus       296 ~~~~~~~~~~~~~~~~  311 (312)
T cd08269         296 FEAARRRPDGFIKGVI  311 (312)
T ss_pred             HHHHHhCCCCceEEEe
Confidence            999998865 478886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=3.7e-34  Score=264.18  Aligned_cols=305  Identities=29%  Similarity=0.340  Sum_probs=247.3

Q ss_pred             eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~  109 (364)
                      |++++.+.|+  .+.++ +.|.|.+.+++|+|++.++++|++|+..+.|..+   ...+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~   74 (330)
T cd08245           1 KAAVVHAAGG--PLEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEG   74 (330)
T ss_pred             CeEEEecCCC--CceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCcc
Confidence            5788887765  48888 9999999999999999999999999999988642   2246789999999999999999999


Q ss_pred             CCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          110 LTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       110 ~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      |++||+|+....                        .....|+|++|+.++.+.++++|+++++.+++.+++.+.+||++
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~  154 (330)
T cd08245          75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA  154 (330)
T ss_pred             cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence            999999985310                        00135899999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEEC
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT  244 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~  244 (364)
                      +. ...+.++++++|+| +|.+|++++++|+.+|++|+++.+++++ +.++++|++.+++....+......+.+|++|||
T Consensus       155 l~-~~~~~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~  232 (330)
T cd08245         155 LR-DAGPRPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT  232 (330)
T ss_pred             HH-hhCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence            85 47899999999997 6779999999999999999999877665 777889988888765543332222239999999


Q ss_pred             CCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHH
Q 017901          245 IGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL  324 (364)
Q Consensus       245 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (364)
                      +++......++++++++|+++.+|....            ...   .  .....+..++.++.+.... ....++.++++
T Consensus       233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~------------~~~---~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  294 (330)
T cd08245         233 VVSGAAAEAALGGLRRGGRIVLVGLPES------------PPF---S--PDIFPLIMKRQSIAGSTHG-GRADLQEALDF  294 (330)
T ss_pred             CCcHHHHHHHHHhcccCCEEEEECCCCC------------Ccc---c--cchHHHHhCCCEEEEeccC-CHHHHHHHHHH
Confidence            8876688999999999999999986411            000   0  0011244567777776643 46788889999


Q ss_pred             HHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          325 SETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       325 ~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      +.++.+.+ ..+.|+++++++||+.+.+++..+|+|+
T Consensus       295 l~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         295 AAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            99999876 5578999999999999999999899875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=1.1e-33  Score=259.83  Aligned_cols=310  Identities=28%  Similarity=0.426  Sum_probs=254.2

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |+++.+...+.+..+++. +.+.|.+++++++|++.++++|++|+....+..+.  +..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~   77 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP--PPGASDILGLEVAGEVVAVGEGVS   77 (325)
T ss_pred             CceEEEccCCCcccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCCccceeEEEEEEeCCCCC
Confidence            678888877777778887 77777789999999999999999999988775432  124578999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      ++++||+|+++..    +|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+...+.++++++|+|++|.+|
T Consensus        78 ~~~~Gd~V~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g  153 (325)
T TIGR02824        78 RWKVGDRVCALVA----GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIG  153 (325)
T ss_pred             CCCCCCEEEEccC----CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHH
Confidence            9999999999743    489999999999999999999999999999999999999987888999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCC
Q 017901          189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G  262 (364)
                      ++++++++..|++|+++.++++. +.++++|++.+++....++.+.+.     +++|+++||+|+. ....++++++++|
T Consensus       154 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g  232 (325)
T TIGR02824       154 TTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALDG  232 (325)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccCc
Confidence            99999999999999998876654 667888988888776655554443     2399999999987 8889999999999


Q ss_pred             EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC---------HHHHHHHHHHHHcCCceec
Q 017901          263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD---------AEGLEEIRRLSETGKLKIP  333 (364)
Q Consensus       263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~i~~~  333 (364)
                      +++.+|....     .      ..      ..+...++.+++++.+......         ...+..++++++++.+.+.
T Consensus       233 ~~v~~g~~~~-----~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  295 (325)
T TIGR02824       233 RIVQIGFQGG-----R------KA------ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV  295 (325)
T ss_pred             EEEEEecCCC-----C------cC------CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc
Confidence            9999986411     0      00      0111123467888877664210         2345667888899998877


Q ss_pred             cceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          334 VDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      .++.|++++++++++.+.++...+|+++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       296 IDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             cccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            888999999999999999888889999874

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-33  Score=259.12  Aligned_cols=313  Identities=36%  Similarity=0.569  Sum_probs=240.2

Q ss_pred             EecccCCCceE--EEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCC
Q 017901           33 VLPRFGGPEVL--EVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSL  110 (364)
Q Consensus        33 ~~~~~g~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~  110 (364)
                      +++..++++++  ++. +.+.|.+.++||+|+++++++|++|+..+.|..+.......|..+|||++|+|+++|+++.++
T Consensus         2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~   80 (319)
T cd08267           2 VYTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF   80 (319)
T ss_pred             eeCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCC
Confidence            34556676665  788 889999999999999999999999999988754321122446789999999999999999999


Q ss_pred             CCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHH
Q 017901          111 TVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFA  190 (364)
Q Consensus       111 ~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~  190 (364)
                      ++||+|+..... ...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.....+++|++++|+|++|.+|++
T Consensus        81 ~~Gd~V~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~  159 (319)
T cd08267          81 KVGDEVFGRLPP-KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTF  159 (319)
T ss_pred             CCCCEEEEeccC-CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHH
Confidence            999999987521 1248999999999999999999999999999999999999999777779999999999988999999


Q ss_pred             HHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc--CCccEEEECCCCc-hhHHHHHhhccCCCEEEEE
Q 017901          191 AVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       191 ~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~  267 (364)
                      ++++|+..|++|++++++++.+.++++|++++++....++.....  +.+|+++||+|+. ......+..++++|+++.+
T Consensus       160 ~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~  239 (319)
T cd08267         160 AVQIAKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSV  239 (319)
T ss_pred             HHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEe
Confidence            999999999999998876445778899998888766544421111  2399999999953 2333444459999999999


Q ss_pred             ccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHH
Q 017901          268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAH  347 (364)
Q Consensus       268 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~  347 (364)
                      |.....          ...... ... .......+......  .....+.+.++++++.++.+.+.+++.|+++++++|+
T Consensus       240 g~~~~~----------~~~~~~-~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~  305 (319)
T cd08267         240 GGGPSG----------LLLVLL-LLP-LTLGGGGRRLKFFL--AKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAY  305 (319)
T ss_pred             cccccc----------cccccc-ccc-hhhccccceEEEEE--ecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHH
Confidence            865110          000000 000 00011122222222  2223778999999999999988888999999999999


Q ss_pred             HHHhcCCCCCeEEE
Q 017901          348 EAKDKRLIPGKVVL  361 (364)
Q Consensus       348 ~~~~~~~~~gkvvi  361 (364)
                      +.+.++...+|+++
T Consensus       306 ~~~~~~~~~~~vvv  319 (319)
T cd08267         306 RRLKSGRARGKVVI  319 (319)
T ss_pred             HHHhcCCCCCcEeC
Confidence            99998888888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.1e-33  Score=257.20  Aligned_cols=314  Identities=30%  Similarity=0.416  Sum_probs=252.8

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++.+.+.+.++.+.+. +.+.|.+.+++++|++.++++|++|+....+.....  ..+|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~   77 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVT   77 (328)
T ss_pred             CeEEEEeccCCcceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCC
Confidence            688889877777788888 888888999999999999999999999887764332  24577899999999999999999


Q ss_pred             CCCCCCEEEEecCC-CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          109 SLTVGQEVFGALHP-TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      ++++||+|.++... ....|+|++|+.++.+.++++|++++..+++.+++.+.++|+++.....+.++++++|+|++|.+
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~  157 (328)
T cd08268          78 GFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSV  157 (328)
T ss_pred             cCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence            99999999987431 12358999999999999999999999999999999999999998778899999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      |++++++++..|++++++++++.. +.+.++|.+.+++....++...+.    + .+|++++++|+. ....++++++++
T Consensus       158 g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~  236 (328)
T cd08268         158 GLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPG  236 (328)
T ss_pred             HHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccC
Confidence            999999999999999999776554 667888988888776655444332    1 399999999996 888999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc---C----HHHHHHHHHHHHcCCceecc
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA---D----AEGLEEIRRLSETGKLKIPV  334 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~g~i~~~~  334 (364)
                      |+++.+|....           .+.    .  ......+.+++.+.+.....   .    ...+..+.+++.++.+.+..
T Consensus       237 g~~v~~g~~~~-----------~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (328)
T cd08268         237 GTLVVYGALSG-----------EPT----P--FPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVV  299 (328)
T ss_pred             CEEEEEEeCCC-----------CCC----C--CchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCc
Confidence            99999986411           000    0  00011355666666654321   1    23455566667788888777


Q ss_pred             ceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          335 DKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       335 ~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +..|++++++++++.+.+++..+|+++++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         300 DRVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             ccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            88999999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.5e-33  Score=253.47  Aligned_cols=274  Identities=23%  Similarity=0.339  Sum_probs=222.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||++++.+. .+..++++ +++.|++.+++|+|++.++++|++|+....|...   +...|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~-~~~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~   75 (306)
T cd08258           1 MKALVKTGP-GPGNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVE   75 (306)
T ss_pred             CeeEEEecC-CCCceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcC
Confidence            578888763 34568999 9999999999999999999999999998888642   224578899999999999999999


Q ss_pred             CCCCCCEEEEecCCC------------------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      .|++||+|++.....                        ...|+|++|+.++.+.++++|+++++.+++ ++....+||+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~  154 (306)
T cd08258          76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH  154 (306)
T ss_pred             cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence            999999999865210                        124899999999999999999999999887 6677889999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-c-c-HHHHHHcCCceeeeCCChhHHHHhc-----C
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-K-S-IDRVLAAGAEQAVDYSSKDIELAIK-----G  236 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~-~-~~~~~~~g~~~v~~~~~~~~~~~i~-----g  236 (364)
                      ++...+.++++++|+|.| +|.+|++++|+|+..|++|+++..+ + + ...++++|++++ ++...++.+.+.     +
T Consensus       155 ~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~  232 (306)
T cd08258         155 AVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGD  232 (306)
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence            988888999999999977 7999999999999999999887432 2 2 366788999878 776666555443     2


Q ss_pred             CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHH
Q 017901          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE  316 (364)
Q Consensus       237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (364)
                      ++|++|||+|+...+...+++|+++|+++.+|....           .+      ..+++..++.+++++.|++++ +++
T Consensus       233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~------~~~~~~~~~~~~~~i~g~~~~-~~~  294 (306)
T cd08258         233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----------LA------ASIDVERIIQKELSVIGSRSS-TPA  294 (306)
T ss_pred             CCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----------CC------cccCHHHHhhcCcEEEEEecC-chH
Confidence            399999999876688899999999999999987510           01      111222456789999999976 578


Q ss_pred             HHHHHHHHHHcC
Q 017901          317 GLEEIRRLSETG  328 (364)
Q Consensus       317 ~~~~~~~~~~~g  328 (364)
                      +++++++++++|
T Consensus       295 ~~~~~~~~~~~~  306 (306)
T cd08258         295 SWETALRLLASG  306 (306)
T ss_pred             hHHHHHHHHhcC
Confidence            899999999875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.5e-32  Score=251.86  Aligned_cols=308  Identities=32%  Similarity=0.459  Sum_probs=250.3

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCC-CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      |+|+++..++.+..+.+. +.+ |.+. +++++|++.++++|++|+..+.|....  ....|+++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~   76 (323)
T cd08241           1 MKAVVCKELGGPEDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGV   76 (323)
T ss_pred             CeEEEEecCCCcceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCC
Confidence            688999877777778888 777 7666 499999999999999999988875421  12346789999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      ..+++||+|+++..    .|+|++|+.++.+.++++|++++..+++.+...+.+||+++.....+.++++++|+|+.|.+
T Consensus        77 ~~~~~G~~V~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~  152 (323)
T cd08241          77 TGFKVGDRVVALTG----QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGV  152 (323)
T ss_pred             CCCCCCCEEEEecC----CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence            99999999999861    38999999999999999999999999988989999999998777889999999999988999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      |++++++|+..|++|+.+.++.++ +.+.++|++.+++....++.+.+.     +.+|.++||+|+. .+..++++++++
T Consensus       153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~  231 (323)
T cd08241         153 GLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG  231 (323)
T ss_pred             HHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccC
Confidence            999999999999999999776554 777888988888776655544443     2399999999986 888999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc--------CHHHHHHHHHHHHcCCceec
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA--------DAEGLEEIRRLSETGKLKIP  333 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~i~~~  333 (364)
                      |+++.+|....            ...   .  ........+++++.+.....        ..+.+.++++++.++.+.+.
T Consensus       232 g~~v~~~~~~~------------~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (323)
T cd08241         232 GRLLVIGFASG------------EIP---Q--IPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPH  294 (323)
T ss_pred             CEEEEEccCCC------------CcC---c--CCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccc
Confidence            99999986410            000   0  00002344667777665421        12567888999999999887


Q ss_pred             cceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901          334 VDKTFHMTQVREAHEAKDKRLIPGKVVLE  362 (364)
Q Consensus       334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi~  362 (364)
                      .++.|+++++++|++.+.++...+|++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         295 VSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             cceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            88999999999999999888888898864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.8e-32  Score=253.39  Aligned_cols=325  Identities=29%  Similarity=0.373  Sum_probs=248.4

Q ss_pred             eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~  109 (364)
                      |++.+...+.+..+.+. +.+.|.|.+++|+|++.++++|++|+..+.|..+.  ....|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~   77 (337)
T cd08275           1 RAVVLTGFGGLDKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKD   77 (337)
T ss_pred             CeEEEcCCCCccceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcC
Confidence            46677766666678888 88888899999999999999999999998875432  1245778999999999999999999


Q ss_pred             CCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHH
Q 017901          110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF  189 (364)
Q Consensus       110 ~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~  189 (364)
                      +++||+|+++..    .|+|++|+.++.+.++++|+++++.+++.+++...+||+++.+...+++|++++|+|++|.+|+
T Consensus        78 ~~~G~~V~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~  153 (337)
T cd08275          78 FKVGDRVMGLTR----FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGL  153 (337)
T ss_pred             CCCCCEEEEecC----CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHH
Confidence            999999999853    4899999999999999999999999999999999999999878889999999999998899999


Q ss_pred             HHHHHHHHc-CCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEE
Q 017901          190 AAVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHY  264 (364)
Q Consensus       190 ~~~~~a~~~-g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~  264 (364)
                      +++++|+.. +..++....+++.+.+.++|++.+++....++...+.    +.+|+++||+|+. ....++++++++|++
T Consensus       154 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~g~~  232 (337)
T cd08275         154 AAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPMGRL  232 (337)
T ss_pred             HHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccCcEE
Confidence            999999998 3333322222244777889998888876655544433    2399999999987 788999999999999


Q ss_pred             EEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----C---HHHHHHHHHHHHcCCceecccee
Q 017901          265 MTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----D---AEGLEEIRRLSETGKLKIPVDKT  337 (364)
Q Consensus       265 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~g~i~~~~~~~  337 (364)
                      +.+|................+. +.............+++++.++....    .   ...+.++++++.++.+.+..++.
T Consensus       233 v~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (337)
T cd08275         233 VVYGAANLVTGEKRSWFKLAKK-WWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSV  311 (337)
T ss_pred             EEEeecCCcCcccccccccccc-cccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeE
Confidence            9998652100000000000000 00000111113456677777765421    1   23467788899999988878889


Q ss_pred             eccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          338 FHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       338 ~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      |++++++++++.+.++...+|+++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         312 FPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             EcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            99999999999999888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=6.4e-33  Score=252.32  Aligned_cols=288  Identities=28%  Similarity=0.394  Sum_probs=232.2

Q ss_pred             CCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcce
Q 017901           51 VPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYA  130 (364)
Q Consensus        51 ~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~  130 (364)
                      .|.+.+++|+|++.++++|++|+....+.++.  ...+|.++|+|++|+|+++|++++++++||+|+++...  ..|+|+
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--~~g~~~   77 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE--SMGGHA   77 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC--CCccee
Confidence            46789999999999999999999999886532  22568899999999999999999999999999987531  358999


Q ss_pred             eEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          131 DYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       131 ~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +|+.++.+.++++|+++++.+++.++..+.+||+++ +...+++|++++|+++++.+|++++++++.+|++|+++++.++
T Consensus        78 ~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~  156 (303)
T cd08251          78 TLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDD  156 (303)
T ss_pred             eEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence            999999999999999999999999999999999998 5789999999999999999999999999999999999977665


Q ss_pred             H-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhcccccccc
Q 017901          211 I-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGL  284 (364)
Q Consensus       211 ~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  284 (364)
                      + +.++++|++.+++....++...+.     ..+|+++|++++. ....++++++++|+++.+|....        ....
T Consensus       157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~--------~~~~  227 (303)
T cd08251         157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPGGRYVEIAMTAL--------KSAP  227 (303)
T ss_pred             HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccCcEEEEEeccCC--------CccC
Confidence            4 777889999898877665555443     2399999999876 88899999999999999985411        0000


Q ss_pred             chhhHHHHHHhhhhhhccceeEEEEEe-----c-c--CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCC
Q 017901          285 PIATTVLLKKRMQTWYSYGIDYSYIYM-----R-A--DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIP  356 (364)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~--~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~  356 (364)
                      ..    ..     ..+.+++.+.....     . +  ..+.+.++++++.++.+++..++.|++++++++++.+.+++..
T Consensus       228 ~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (303)
T cd08251         228 SV----DL-----SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENI  298 (303)
T ss_pred             cc----Ch-----hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCc
Confidence            00    00     01122222222211     1 0  1345777889999999988788999999999999999998888


Q ss_pred             CeEEE
Q 017901          357 GKVVL  361 (364)
Q Consensus       357 gkvvi  361 (364)
                      +|+++
T Consensus       299 ~~iv~  303 (303)
T cd08251         299 GKVVV  303 (303)
T ss_pred             ceEeC
Confidence            88874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=6e-31  Score=237.58  Aligned_cols=277  Identities=26%  Similarity=0.289  Sum_probs=226.5

Q ss_pred             CeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeec
Q 017901           57 NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLS  136 (364)
Q Consensus        57 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~  136 (364)
                      +||+||+.++++|++|++...|..+     .+|.++|||++|+|+++|++++.+++||+|++...     |+|++|+.++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~-----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~-----g~~~~~~~~~   70 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP-----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP-----GAFATHVRVD   70 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC-----CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec-----CcccceEEec
Confidence            5899999999999999999988531     35778999999999999999999999999999865     8999999999


Q ss_pred             CCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH
Q 017901          137 EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL  215 (364)
Q Consensus       137 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~  215 (364)
                      .+.++++|+++++.+++.+++++.++|+++.+...+++|++++|+|+.|.+|++++++|+.+|++++++++++++ +.+.
T Consensus        71 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~  150 (293)
T cd05195          71 ARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR  150 (293)
T ss_pred             hhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            999999999999999999999999999998777899999999999989999999999999999999999877654 6777


Q ss_pred             HcC--CceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhh
Q 017901          216 AAG--AEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (364)
Q Consensus       216 ~~g--~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (364)
                      +++  ++.+++....++.+.+.     ..+|+++||+|+. .+..++++++++|+++.+|....     ..    ...  
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~-----~~----~~~--  218 (293)
T cd05195         151 ELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRDI-----LS----NSK--  218 (293)
T ss_pred             HhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccCceEEEeecccc-----cc----CCc--
Confidence            787  67788776655554443     1399999999998 89999999999999999986511     00    000  


Q ss_pred             HHHHHHhhhhhhccceeEEEEEec------c--CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEE
Q 017901          289 TVLLKKRMQTWYSYGIDYSYIYMR------A--DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV  360 (364)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvv  360 (364)
                      . .  .   ..+.+++.+......      .  ..+.+..+++++.++.+.+..+..|+++++++|++.+.+++..+|++
T Consensus       219 ~-~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~iv  292 (293)
T cd05195         219 L-G--M---RPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVV  292 (293)
T ss_pred             c-c--h---hhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceec
Confidence            0 0  0   112234444443321      0  13467788999999999888888999999999999999888888887


Q ss_pred             E
Q 017901          361 L  361 (364)
Q Consensus       361 i  361 (364)
                      +
T Consensus       293 v  293 (293)
T cd05195         293 L  293 (293)
T ss_pred             C
Confidence            4

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.4e-31  Score=241.08  Aligned_cols=233  Identities=25%  Similarity=0.330  Sum_probs=185.1

Q ss_pred             ccccceeEEEEeecCCCC------CCCCCCEEEEecCCC------------------------------CCCCcceeEEe
Q 017901           91 ILGRDISGEVAAVGASVR------SLTVGQEVFGALHPT------------------------------AVRGTYADYAV  134 (364)
Q Consensus        91 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~~~~------------------------------~~~g~~~~~~~  134 (364)
                      ++|||++|+|+++|++++      +|++||||.......                              ..+|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999998      899999997643200                              03699999999


Q ss_pred             ecCC-ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-
Q 017901          135 LSED-ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-  211 (364)
Q Consensus       135 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-  211 (364)
                      ++.+ .++++|+++++++++.+++.+.|+|+++. .....+|++|+|+| +|++|++++|+|+.+|++ |+++.+++++ 
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            9997 69999999999999999999999999984 45667999999998 699999999999999996 8887655544 


Q ss_pred             HHHHHcCCceeeeCCCh-hHHHHhc---CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchh
Q 017901          212 DRVLAAGAEQAVDYSSK-DIELAIK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA  287 (364)
Q Consensus       212 ~~~~~~g~~~v~~~~~~-~~~~~i~---g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (364)
                      +.++++|++.++++... .....+.   + +|++|||+|++..+..++++++++|+++.+|....          ..+  
T Consensus       159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g-~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----------~~~--  225 (280)
T TIGR03366       159 ELALSFGATALAEPEVLAERQGGLQNGRG-VDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP----------GGP--  225 (280)
T ss_pred             HHHHHcCCcEecCchhhHHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCC----------CCc--
Confidence            88899999988876542 1111121   4 99999999988789999999999999999996410          001  


Q ss_pred             hHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcC--Cce--eccceeeccccH
Q 017901          288 TTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETG--KLK--IPVDKTFHMTQV  343 (364)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~i~--~~~~~~~~l~~~  343 (364)
                          .+++...+..+++++.+++.. +.++++++++++.++  ++.  ++++++|+|+|+
T Consensus       226 ----~~i~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       226 ----VALDPEQVVRRWLTIRGVHNY-EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             ----eeeCHHHHHhCCcEEEecCCC-CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence                112223567789999998754 567899999999974  444  468999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>smart00829 PKS_ER Enoylreductase

Probab=99.98  E-value=1.6e-30  Score=234.49  Aligned_cols=272  Identities=26%  Similarity=0.359  Sum_probs=221.1

Q ss_pred             EEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCcc
Q 017901           61 VRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL  140 (364)
Q Consensus        61 V~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~  140 (364)
                      ||+.++++|++|++...|.++      .|.++|||++|+|+++|++++.|++||+|++...     |+|++|+.++.+.+
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~------~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-----g~~~~~~~~~~~~~   70 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP------GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-----GSFATYVRTDARLV   70 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC------CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-----CceeeEEEccHHHe
Confidence            789999999999999988532      3678999999999999999999999999999865     89999999999999


Q ss_pred             ccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC
Q 017901          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA  219 (364)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~  219 (364)
                      +++|+++++.+++.+++.+.++|+++.+...+.+|++++|+|+.|.+|++++++|+..|++|+++++++++ +.++++|+
T Consensus        71 ~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~  150 (288)
T smart00829       71 VPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGI  150 (288)
T ss_pred             EECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence            99999999999999999999999998777899999999999999999999999999999999999876654 77788998


Q ss_pred             --ceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHH
Q 017901          220 --EQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (364)
Q Consensus       220 --~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (364)
                        +.++++...++.+.+.     .++|+++|++|+. .+..++++++++|+++.+|....     .   .....      
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~-----~---~~~~~------  215 (288)
T smart00829      151 PDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGRFVEIGKRDI-----R---DNSQL------  215 (288)
T ss_pred             ChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcEEEEEcCcCC-----c---ccccc------
Confidence              6788776655554443     1399999999975 88899999999999999986410     0   00000      


Q ss_pred             HHhhhhhhccceeEEEEEec-----c--CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          293 KKRMQTWYSYGIDYSYIYMR-----A--DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                        .. ..+.+++.+.+....     +  ..+.+..+++++.++++.+...+.|++++++++++.+..++..+|+++
T Consensus       216 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      216 --GM-APFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             --ch-hhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence              00 112344555444321     0  124567788899999888767788999999999999998887788774

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.97  E-value=5.2e-29  Score=212.49  Aligned_cols=287  Identities=20%  Similarity=0.207  Sum_probs=227.6

Q ss_pred             CCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccc----cceeEEEEeecCCCCCCCCCCEEEEecCCCCCCC
Q 017901           52 PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILG----RDISGEVAAVGASVRSLTVGQEVFGALHPTAVRG  127 (364)
Q Consensus        52 p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g  127 (364)
                      .++++++|+||.+|.+.+|..+..++...+...  -.|+.+|    ..++|+|++  +..+++++||.|.++.       
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y--~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~-------  101 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDY--APPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV-------  101 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCcccc--cCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec-------
Confidence            357899999999999999987776655333211  2234444    377999999  4567899999999984       


Q ss_pred             cceeEEeecCCc--cccCCC--CCChhhh-ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeE
Q 017901          128 TYADYAVLSEDE--LTPKPV--SVTHADA-SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV  202 (364)
Q Consensus       128 ~~~~~~~~~~~~--~~~ip~--~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~v  202 (364)
                      +|.+|.+++...  .++++.  +.++.-. .++..+++|||-++.+.+..+.|++++|.||+|.+|+++.|+|+.+|++|
T Consensus       102 gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~V  181 (343)
T KOG1196|consen  102 GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYV  181 (343)
T ss_pred             cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEE
Confidence            699999997753  455554  4444433 44477899999999999999999999999999999999999999999999


Q ss_pred             EEeeCCccH-HH-HHHcCCceeeeCCCh-hHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhh
Q 017901          203 SATCGSKSI-DR-VLAAGAEQAVDYSSK-DIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAAL  274 (364)
Q Consensus       203 i~~~~~~~~-~~-~~~~g~~~v~~~~~~-~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~  274 (364)
                      ++++.++++ .+ ..++|.+.++||.++ +....++     | +|+.||.+|+. .++..+..|+..||++.||...   
T Consensus       182 VGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~G-IDiYfeNVGG~-~lDavl~nM~~~gri~~CG~IS---  256 (343)
T KOG1196|consen  182 VGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEG-IDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMIS---  256 (343)
T ss_pred             EEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCc-ceEEEeccCcH-HHHHHHHhhhhccceEeeeeeh---
Confidence            999988886 44 577899999999988 6666665     6 99999999998 9999999999999999999652   


Q ss_pred             hhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHH
Q 017901          275 ADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAK  350 (364)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~  350 (364)
                        .|..+...+.       ..+...+.+++.+.++....    ....++.+..++++|+|...-+-.-.|+..++||.-+
T Consensus       257 --qYN~~~~~~~-------~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vgl  327 (343)
T KOG1196|consen  257 --QYNLENPEGL-------HNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGL  327 (343)
T ss_pred             --hccccCCccc-------cchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHH
Confidence              2433333221       11125677888888876522    2456788899999999998766566799999999999


Q ss_pred             hcCCCCCeEEEEc
Q 017901          351 DKRLIPGKVVLEF  363 (364)
Q Consensus       351 ~~~~~~gkvvi~~  363 (364)
                      .+++..||.++++
T Consensus       328 f~GkNvGKqiv~v  340 (343)
T KOG1196|consen  328 FHGKNVGKQLVKV  340 (343)
T ss_pred             hccCcccceEEEe
Confidence            9999999999976

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=5.3e-29  Score=222.89  Aligned_cols=246  Identities=33%  Similarity=0.494  Sum_probs=200.6

Q ss_pred             eEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCC--------------
Q 017901           58 EVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT--------------  123 (364)
Q Consensus        58 eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~--------------  123 (364)
                      ||+|++.++++|++|+..+.|..+  ....+|.++|+|++|+|+++|++++.|++||+|+......              
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~   78 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG   78 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence            689999999999999999988643  1235578999999999999999999999999999876311              


Q ss_pred             -----CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc
Q 017901          124 -----AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS  198 (364)
Q Consensus       124 -----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~  198 (364)
                           ...|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.....+.++++++|+|+++ +|++++++++..
T Consensus        79 ~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~  157 (271)
T cd05188          79 GILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA  157 (271)
T ss_pred             CEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc
Confidence                 13589999999999999999999999999999999999999997777779999999999766 999999999999


Q ss_pred             CCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh----cCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchh
Q 017901          199 GCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAA  273 (364)
Q Consensus       199 g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i----~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  273 (364)
                      |.+|+++.++++. +.++++|++++++....+....+    .+++|++||++|+......++++++++|+++.+|.... 
T Consensus       158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-  236 (271)
T cd05188         158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSG-  236 (271)
T ss_pred             CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCC-
Confidence            9999999877554 77888998888887765555443    13499999999994488999999999999999986511 


Q ss_pred             hhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHH
Q 017901          274 LADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL  324 (364)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (364)
                               ....    .   .....+.+++++.+++.. ...++++++++
T Consensus       237 ---------~~~~----~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  270 (271)
T cd05188         237 ---------GPPL----D---DLRRLLFKELTIIGSTGG-TREDFEEALDL  270 (271)
T ss_pred             ---------CCCc----c---cHHHHHhcceEEEEeecC-CHHHHHHHHhh
Confidence                     0000    0   011356788999988765 46677777765

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.96  E-value=1.6e-28  Score=238.75  Aligned_cols=292  Identities=23%  Similarity=0.306  Sum_probs=242.4

Q ss_pred             CCCceEEEcccccCC---CCCCCeEEEEEeEeecChhhhhhhccCCccc-cC---CCCCcccccceeEEEEeecCCCCCC
Q 017901           38 GGPEVLEVRPNVEVP---DLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-FE---PLLPLILGRDISGEVAAVGASVRSL  110 (364)
Q Consensus        38 g~~~~~~~~~~~~~p---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~---~~~p~~~G~e~~G~V~~vG~~~~~~  110 (364)
                      |+...++|. +-|..   +..++.=+.-|.|++||..|+....|+.++. .+   .....++|.|++|+          .
T Consensus      1424 GDlsSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d 1492 (2376)
T KOG1202|consen 1424 GDLSSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------D 1492 (2376)
T ss_pred             ccccceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------c
Confidence            556678887 66654   3456778899999999999999999986432 22   23457899999998          5


Q ss_pred             CCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHH
Q 017901          111 TVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFA  190 (364)
Q Consensus       111 ~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~  190 (364)
                      +-|.||+++..    .-++++.+.++.+.+|.+|+++++++|++.|+-+.|||+||..++..++|+++||++++|++|++
T Consensus      1493 ~~GrRvM~mvp----AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQA 1568 (2376)
T KOG1202|consen 1493 ASGRRVMGMVP----AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQA 1568 (2376)
T ss_pred             CCCcEEEEeee----hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHH
Confidence            67999999987    35889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCeEEEeeCCccH-HHHH----HcCCceeeeCCChhHHHHhc------CCccEEEECCCCchhHHHHHhhcc
Q 017901          191 AVQFSVASGCHVSATCGSKSI-DRVL----AAGAEQAVDYSSKDIELAIK------GKFDAVLDTIGAPETERLGLNFLK  259 (364)
Q Consensus       191 ~~~~a~~~g~~vi~~~~~~~~-~~~~----~~g~~~v~~~~~~~~~~~i~------g~~D~vid~~g~~~~~~~~~~~l~  259 (364)
                      +|.+|.++|++||.++.++++ +++.    ++...++-|+++.+|...+.      | +|+|++....+ -++..++||+
T Consensus      1569 AIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrG-VdlVLNSLaeE-kLQASiRCLa 1646 (2376)
T KOG1202|consen 1569 AIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRG-VDLVLNSLAEE-KLQASIRCLA 1646 (2376)
T ss_pred             HHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCC-eeeehhhhhHH-HHHHHHHHHH
Confidence            999999999999999887775 5443    34455677888888888776      5 99999999988 9999999999


Q ss_pred             CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec----cCHHHHHHHHHHHHc----CCce
Q 017901          260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR----ADAEGLEEIRRLSET----GKLK  331 (364)
Q Consensus       260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----g~i~  331 (364)
                      -+|||..+|..+.        ..+.|.    .+     ..+.+|.++.|...+    .+.+.+.++..++++    |.++
T Consensus      1647 ~~GRFLEIGKfDL--------SqNspL----GM-----avfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~ 1709 (2376)
T KOG1202|consen 1647 LHGRFLEIGKFDL--------SQNSPL----GM-----AVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVR 1709 (2376)
T ss_pred             hcCeeeeecceec--------ccCCcc----hh-----hhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCcee
Confidence            9999999997622        122222    11     467788898887653    245677777777765    6778


Q ss_pred             eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          332 IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       332 ~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      |+.+++|+-.++++||++|.++++.||+|+++
T Consensus      1710 PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1710 PLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             ccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence            89999999999999999999999999999975

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=3.8e-27  Score=212.01  Aligned_cols=246  Identities=26%  Similarity=0.305  Sum_probs=192.7

Q ss_pred             CCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901           85 EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus        85 ~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      +.++|.++|||++|+|+++|+++++|++||+|+++       +.|++|+.++.+.++++|+++++.+++.+ .++++||+
T Consensus        17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~   88 (277)
T cd08255          17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALN   88 (277)
T ss_pred             cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHH
Confidence            34678999999999999999999999999999997       45899999999999999999999998888 78999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcC-CceeeeCCChhHHHHhcCCccEE
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAG-AEQAVDYSSKDIELAIKGKFDAV  241 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g-~~~v~~~~~~~~~~~i~g~~D~v  241 (364)
                      ++ ..+++++|++++|+| +|.+|++++++|+.+|++ |+++.+++++ +.++++| ++.+++......  .-.+ +|++
T Consensus        89 ~~-~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~-~d~v  163 (277)
T cd08255          89 GV-RDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEI--GGRG-ADVV  163 (277)
T ss_pred             HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhh--cCCC-CCEE
Confidence            98 478999999999997 799999999999999998 9998776655 7788888 555555432111  1114 9999


Q ss_pred             EECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc--------
Q 017901          242 LDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA--------  313 (364)
Q Consensus       242 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  313 (364)
                      |||++....+..++++++++|+++.+|....           ...    ...   ..+..+.+++.+.....        
T Consensus       164 l~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~-----------~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  225 (277)
T cd08255         164 IEASGSPSALETALRLLRDRGRVVLVGWYGL-----------KPL----LLG---EEFHFKRLPIRSSQVYGIGRYDRPR  225 (277)
T ss_pred             EEccCChHHHHHHHHHhcCCcEEEEEeccCC-----------Ccc----ccH---HHHHhccCeEEeecccccccccccc
Confidence            9999976688999999999999999986511           000    000   01222333444433210        


Q ss_pred             ---CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcC-CCCCeEEE
Q 017901          314 ---DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKR-LIPGKVVL  361 (364)
Q Consensus       314 ---~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~-~~~gkvvi  361 (364)
                         ..+.+.++++++.++.+++.+.+.|+++++++|++.+.++ ....|+++
T Consensus       226 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         226 RWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence               1256888999999999988888899999999999999877 33457653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.76  E-value=3e-18  Score=131.48  Aligned_cols=86  Identities=37%  Similarity=0.561  Sum_probs=72.2

Q ss_pred             CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCC-------------
Q 017901           56 PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP-------------  122 (364)
Q Consensus        56 ~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~-------------  122 (364)
                      |+||+||++++|||++|++.+.|..  ......|+++|||++|+|+++|+++++|++||+|+.....             
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~--~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGP--PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSS--SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhcc--ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            7999999999999999999999941  3345789999999999999999999999999999985421             


Q ss_pred             ----------CCCCCcceeEEeecCCccccC
Q 017901          123 ----------TAVRGTYADYAVLSEDELTPK  143 (364)
Q Consensus       123 ----------~~~~g~~~~~~~~~~~~~~~i  143 (364)
                                ...+|+|+||+++|.++++|+
T Consensus        79 ~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                      136899999999999999885

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.63  E-value=1.7e-15  Score=120.14  Aligned_cols=124  Identities=26%  Similarity=0.368  Sum_probs=103.4

Q ss_pred             hHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhcc
Q 017901          186 AVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLK  259 (364)
Q Consensus       186 ~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~  259 (364)
                      ++|++++|+|++.|++|+++++++++ +.++++|+++++++++.++.+.++    + ++|+||||+|++..++.++++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~   80 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR   80 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence            58999999999999999999988765 889999999999999988877776    2 49999999997779999999999


Q ss_pred             CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHc
Q 017901          260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSET  327 (364)
Q Consensus       260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (364)
                      ++|+++.+|...           +.+      ...+...++.+++++.+++.. +.++++++++++.+
T Consensus        81 ~~G~~v~vg~~~-----------~~~------~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~la~  130 (130)
T PF00107_consen   81 PGGRIVVVGVYG-----------GDP------ISFNLMNLMFKEITIRGSWGG-SPEDFQEALQLLAQ  130 (130)
T ss_dssp             EEEEEEEESSTS-----------TSE------EEEEHHHHHHTTEEEEEESSG-GHHHHHHHHHHHH-
T ss_pred             cCCEEEEEEccC-----------CCC------CCCCHHHHHhCCcEEEEEccC-CHHHHHHHHHHhcC
Confidence            999999999862           011      112223678899999999976 47889999988763

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.55  E-value=8e-15  Score=115.82  Aligned_cols=121  Identities=33%  Similarity=0.564  Sum_probs=80.6

Q ss_pred             cCCceeeeCCChhHHHHhcCCccEEEECCC--CchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901          217 AGAEQAVDYSSKDIELAIKGKFDAVLDTIG--APETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (364)
Q Consensus       217 ~g~~~v~~~~~~~~~~~i~g~~D~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (364)
                      +|+++++||+..++ ..-.+ +|+||||+|  ++..+..+.++| ++|++|+++..              ..    ....
T Consensus         1 LGAd~vidy~~~~~-~~~~~-~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~--------------~~----~~~~   59 (127)
T PF13602_consen    1 LGADEVIDYRDTDF-AGPGG-VDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD--------------LP----SFAR   59 (127)
T ss_dssp             CT-SEEEETTCSHH-HTTS--EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH--------------HH----HHHH
T ss_pred             CCcCEEecCCCccc-cCCCC-ceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc--------------cc----chhh
Confidence            68999999997777 21224 999999999  654457888888 99999999741              00    1000


Q ss_pred             hhhhhhccceeEEEEEe-cc---CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          295 RMQTWYSYGIDYSYIYM-RA---DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       295 ~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                         ........+..... .+   ..+.++++.+++.+|++++.+.++|||+++++|++.+.+++..||+|+
T Consensus        60 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   60 ---RLKGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             ---HHHCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ---hhcccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence               01112222322221 11   245699999999999999999999999999999999999999999996

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.44  E-value=2e-12  Score=120.23  Aligned_cols=175  Identities=20%  Similarity=0.117  Sum_probs=128.5

Q ss_pred             HHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCc
Q 017901          161 TAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       161 ta~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~  238 (364)
                      ..|.++.+..+ .-+|++|+|.| .|.+|+.+++.++.+|++|+++..++. ...+..+|++.+ +     ..+.+.+ +
T Consensus       187 s~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----~~e~v~~-a  258 (413)
T cd00401         187 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----MEEAVKE-G  258 (413)
T ss_pred             hhHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----HHHHHcC-C
Confidence            34555545434 36899999999 899999999999999999998865544 477888998533 2     1234445 9


Q ss_pred             cEEEECCCCchhHHHH-HhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901          239 DAVLDTIGAPETERLG-LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG  317 (364)
Q Consensus       239 D~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (364)
                      |+||+|+|....+... +++++++|+++.+|..              +.      .++...+..+++++.+........+
T Consensus       259 DVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------------~~------eId~~~L~~~el~i~g~~~~~~~~~  318 (413)
T cd00401         259 DIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------------DV------EIDVKGLKENAVEVVNIKPQVDRYE  318 (413)
T ss_pred             CEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------------CC------ccCHHHHHhhccEEEEccCCcceEE
Confidence            9999999998777765 9999999999999854              11      1122245567777777765322224


Q ss_pred             HH--HHHHHHHcCCc-e--ecccee-----eccc-cHHHHHHHHhcCCCC-CeEEEEc
Q 017901          318 LE--EIRRLSETGKL-K--IPVDKT-----FHMT-QVREAHEAKDKRLIP-GKVVLEF  363 (364)
Q Consensus       318 ~~--~~~~~~~~g~i-~--~~~~~~-----~~l~-~~~eA~~~~~~~~~~-gkvvi~~  363 (364)
                      +.  ..+.++.+|.+ .  ..+++.     |+|+ |+.+++..+.++... .|+++.+
T Consensus       319 ~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         319 LPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             cCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence            45  68999999988 3  457888     9999 999999999877642 4777654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.18  E-value=1.2e-09  Score=104.49  Aligned_cols=143  Identities=20%  Similarity=0.187  Sum_probs=100.7

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCcee-eeCCCh-------------hHH-----
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSSK-------------DIE-----  231 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v-~~~~~~-------------~~~-----  231 (364)
                      ..++++|+|.| +|.+|+++++.|+.+|++|+++..+++ ++.++++|++.+ ++..+.             ++.     
T Consensus       162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            35799999999 899999999999999999999966555 488999999854 554221             211     


Q ss_pred             ---HHhcCCccEEEECCCCch-----h-HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhc-
Q 017901          232 ---LAIKGKFDAVLDTIGAPE-----T-ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS-  301 (364)
Q Consensus       232 ---~~i~g~~D~vid~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  301 (364)
                         +.+++ +|++|+|+|.+.     . .+.+++.+++||+++.+|...+          +.-.     ...+...++. 
T Consensus       241 ~~~~~~~g-aDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~G----------G~~e-----~t~~~~~v~~~  304 (509)
T PRK09424        241 LFAEQAKE-VDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENG----------GNCE-----LTVPGEVVVTD  304 (509)
T ss_pred             HHHhccCC-CCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCC----------CCcc-----cccCccceEeE
Confidence               11234 999999999742     4 4999999999999999986411          1000     0111113444 


Q ss_pred             cceeEEEEEeccCHHHHHHHHHHHHcCCcee
Q 017901          302 YGIDYSYIYMRADAEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~  332 (364)
                      +++++.+.+..+ .+...+..+++.++.+..
T Consensus       305 ~gVti~Gv~n~P-~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        305 NGVTIIGYTDLP-SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             CCEEEEEeCCCc-hhHHHHHHHHHHhCCccH
Confidence            789998876432 233345889999888765

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.42  E-value=4.3e-06  Score=78.49  Aligned_cols=103  Identities=18%  Similarity=0.138  Sum_probs=78.3

Q ss_pred             HHHHHHHHHhcccC-CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCC
Q 017901          160 LTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGK  237 (364)
Q Consensus       160 ~ta~~~l~~~~~~~-~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~  237 (364)
                      ..+|+++.+..++. .|++++|.| .|.+|..+++.++.+|++|+++..++.+ ..+...|+. +.+     +.+.+.+ 
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal~~-  267 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT-----MEEAAEL-  267 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHHhC-
Confidence            34566665443444 899999999 8999999999999999999998766554 445555664 322     2333445 


Q ss_pred             ccEEEECCCCchhHH-HHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPETER-LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+||+|+|....+. ..+..+++|+.++..|..
T Consensus       268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~  301 (425)
T PRK05476        268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHF  301 (425)
T ss_pred             CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCC
Confidence            999999999876665 688999999999999875

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.27  E-value=7.9e-06  Score=78.29  Aligned_cols=95  Identities=25%  Similarity=0.385  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCcee-eeCCC-------------hh--------H
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSS-------------KD--------I  230 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v-~~~~~-------------~~--------~  230 (364)
                      ++++++|.| .|.+|++++++++.+|++|+++..+.+ ++.++++|++.+ ++..+             .+        +
T Consensus       163 p~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~  241 (511)
T TIGR00561       163 PPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF  241 (511)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence            568999999 899999999999999999999866654 478888998752 22211             11        2


Q ss_pred             HHHhcCCccEEEECC---CCch---hHHHHHhhccCCCEEEEEccC
Q 017901          231 ELAIKGKFDAVLDTI---GAPE---TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       231 ~~~i~g~~D~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.+++ +|++|+|+   |.+.   .....++.+++|+.+|.++..
T Consensus       242 ~e~~~~-~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d  286 (511)
T TIGR00561       242 AAQAKE-VDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE  286 (511)
T ss_pred             HHHhCC-CCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence            233345 99999999   6643   567889999999999999754

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.24  E-value=1.8e-05  Score=73.88  Aligned_cols=102  Identities=18%  Similarity=0.127  Sum_probs=77.3

Q ss_pred             HHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCc
Q 017901          161 TAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       161 ta~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~  238 (364)
                      .++.++.+..+ ...|++|+|.| .|.+|+.+++.++.+|++|+++..+..+ ..+...|+. +.+     ..+.+.+ .
T Consensus       180 s~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----leeal~~-a  251 (406)
T TIGR00936       180 STIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAAKI-G  251 (406)
T ss_pred             hHHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----HHHHHhc-C
Confidence            45555544433 46899999999 8999999999999999999998655443 555666763 322     2234445 8


Q ss_pred             cEEEECCCCchhHH-HHHhhccCCCEEEEEccC
Q 017901          239 DAVLDTIGAPETER-LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~  270 (364)
                      |++|+++|....+. ..+..+++++.++.+|..
T Consensus       252 DVVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       252 DIFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             CEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence            99999999986676 488999999999999865

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.13  E-value=3.2e-05  Score=69.27  Aligned_cols=167  Identities=16%  Similarity=0.192  Sum_probs=94.9

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHH----cCCceeeeCCChhHHHH-h-cCCccE
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLA----AGAEQAVDYSSKDIELA-I-KGKFDA  240 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~----~g~~~v~~~~~~~~~~~-i-~g~~D~  240 (364)
                      +.+++|++||..| +|. |..+.++++..|.  +|+++..++.. +.+++    .+.+.+- ....++.+. . .+.+|+
T Consensus        73 ~~~~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~~~l~~~~~~fD~  149 (272)
T PRK11873         73 AELKPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEIEALPVADNSVDV  149 (272)
T ss_pred             ccCCCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcchhhCCCCCCceeE
Confidence            5688999999999 666 8888888888775  69999776654 44443    4443221 111122110 1 134999


Q ss_pred             EEECC------CCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC
Q 017901          241 VLDTI------GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD  314 (364)
Q Consensus       241 vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (364)
                      |+...      .....+..+.+.|++||+++..+....           .+.+  ....        +...+.+.... .
T Consensus       150 Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~-----------~~~~--~~~~--------~~~~~~~~~~~-~  207 (272)
T PRK11873        150 IISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLR-----------GELP--EEIR--------NDAELYAGCVA-G  207 (272)
T ss_pred             EEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeecc-----------CCCC--HHHH--------HhHHHHhcccc-C
Confidence            98643      223478999999999999998765410           0110  0110        11111111110 0


Q ss_pred             HHHHHHHHHHHHcCCce---eccceeeccccHHHHHHHH--hcCCCCCeEEE
Q 017901          315 AEGLEEIRRLSETGKLK---IPVDKTFHMTQVREAHEAK--DKRLIPGKVVL  361 (364)
Q Consensus       315 ~~~~~~~~~~~~~g~i~---~~~~~~~~l~~~~eA~~~~--~~~~~~gkvvi  361 (364)
                      .....++.+++++..+.   ....+.++++++.++++.+  ..+...++.+.
T Consensus       208 ~~~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        208 ALQEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             CCCHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence            11233445555553232   3456678899999999988  55554455543

>PLN02494 adenosylhomocysteinase

Probab=98.12  E-value=3.3e-05  Score=72.85  Aligned_cols=101  Identities=18%  Similarity=0.121  Sum_probs=78.0

Q ss_pred             HHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCcc
Q 017901          162 AWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       162 a~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D  239 (364)
                      .+.++.+..++ -.|++++|.| .|.+|..+++.++.+|++|+++..++.+ ..+...|+.. +     ++.+.+.. .|
T Consensus       240 ~~d~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~v-v-----~leEal~~-AD  311 (477)
T PLN02494        240 LPDGLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV-L-----TLEDVVSE-AD  311 (477)
T ss_pred             HHHHHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCee-c-----cHHHHHhh-CC
Confidence            35555454443 6799999999 8999999999999999999998666543 5666677752 2     12334445 99


Q ss_pred             EEEECCCCchhH-HHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPETE-RLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++++|.|....+ ...+..|++++.++.+|..
T Consensus       312 VVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        312 IFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             EEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence            999999987554 7899999999999999974

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.07  E-value=8e-05  Score=67.32  Aligned_cols=92  Identities=20%  Similarity=0.266  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~  252 (364)
                      .+.+++|.| .|.+|+.+++.++.+|++|+++.++.+. +.++++|+..+ ..  .++.+.+.+ +|+||+|++..-...
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~-aDiVI~t~p~~~i~~  225 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL--SELAEEVGK-IDIIFNTIPALVLTK  225 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHhCC-CCEEEECCChhhhhH
Confidence            689999999 7999999999999999999999777554 66778887532 21  234455555 999999998763446


Q ss_pred             HHHhhccCCCEEEEEccC
Q 017901          253 LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~  270 (364)
                      ..++.+++++.++.++..
T Consensus       226 ~~l~~~~~g~vIIDla~~  243 (296)
T PRK08306        226 EVLSKMPPEALIIDLASK  243 (296)
T ss_pred             HHHHcCCCCcEEEEEccC
Confidence            778889999999999864

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.01  E-value=0.00058  Score=61.24  Aligned_cols=164  Identities=13%  Similarity=0.107  Sum_probs=105.5

Q ss_pred             eEEEEeecCCCCCCCCCCEEEEecCCC-----------------------CCCCcceeEEeecCCccccCCCCCChhh-h
Q 017901           97 SGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHAD-A  152 (364)
Q Consensus        97 ~G~V~~vG~~~~~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~-a  152 (364)
                      -++|++  |.++++.+|.||+++.++.                       ...-.|.+|..+..+..+.-    +.++ -
T Consensus        38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~----~~e~~~  111 (314)
T PF11017_consen   38 FATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP----EREDWQ  111 (314)
T ss_pred             EEEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc----chhHHH
Confidence            367777  8889999999999987632                       01122344444443332211    1111 1


Q ss_pred             ccccchHHHHHHHHHHhcc---cCCCCEEEEEcCCchHHHHHHHHHH--HcCCeEEEeeCCccHHHHHHcCC-ceeeeCC
Q 017901          153 SAIPFAALTAWRALKCAAR---MSEGQRLLVLGGGGAVGFAAVQFSV--ASGCHVSATCGSKSIDRVLAAGA-EQAVDYS  226 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~---~~~g~~vli~g~~g~~G~~~~~~a~--~~g~~vi~~~~~~~~~~~~~~g~-~~v~~~~  226 (364)
                      +++-.-+.|.|- |.+...   .-..+.|++..|++..++.++..++  ..+.+++++++.....+.+.+|+ +.|+.|+
T Consensus       112 ~LlrPLf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd  190 (314)
T PF11017_consen  112 MLLRPLFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGCYDEVLTYD  190 (314)
T ss_pred             HHHHHHHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCCceEEeehh
Confidence            222223456663 222221   2344678999999999999999998  33459999999999999999996 6788886


Q ss_pred             ChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCC-EEEEEcc
Q 017901          227 SKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG-HYMTLHG  269 (364)
Q Consensus       227 ~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~  269 (364)
                      +-+..+.  ..--+++|..|+........+.++..= ..+.+|.
T Consensus       191 ~i~~l~~--~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~  232 (314)
T PF11017_consen  191 DIDSLDA--PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGA  232 (314)
T ss_pred             hhhhccC--CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEc
Confidence            5332211  236889999999877777777777653 4555554

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.90  E-value=0.00016  Score=68.49  Aligned_cols=91  Identities=19%  Similarity=0.146  Sum_probs=71.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      .-.|++++|.| .|.+|..+++.++.+|++|+++.++... ..+...|+.. .     ++.+.+.. +|+|+.++|....
T Consensus       251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~-~-----~leell~~-ADIVI~atGt~~i  322 (476)
T PTZ00075        251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV-V-----TLEDVVET-ADIFVTATGNKDI  322 (476)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCcee-c-----cHHHHHhc-CCEEEECCCcccc
Confidence            45799999999 8999999999999999999888665444 3344456542 2     23344445 9999999998756


Q ss_pred             HH-HHHhhccCCCEEEEEccC
Q 017901          251 ER-LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 ~~-~~~~~l~~~G~~v~~g~~  270 (364)
                      +. ..+..|++++.++.+|..
T Consensus       323 I~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        323 ITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             cCHHHHhccCCCcEEEEcCCC
Confidence            64 899999999999999865

>PRK08324 short chain dehydrogenase; Validated

Probab=97.83  E-value=0.00011  Score=74.46  Aligned_cols=133  Identities=20%  Similarity=0.233  Sum_probs=85.1

Q ss_pred             CcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee
Q 017901          127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (364)
Q Consensus       127 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~  206 (364)
                      .++++|..++...++++ +.++.+++..-...          .....+|++++|+||+|++|..+++.+...|++|+++.
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence            35567777777777777 66666655421000          11223689999999999999999999999999999998


Q ss_pred             CCccH--HHHHHcCC--c---eeeeCCChh-H---HHHhc---CCccEEEECCCCc------------------------
Q 017901          207 GSKSI--DRVLAAGA--E---QAVDYSSKD-I---ELAIK---GKFDAVLDTIGAP------------------------  248 (364)
Q Consensus       207 ~~~~~--~~~~~~g~--~---~v~~~~~~~-~---~~~i~---g~~D~vid~~g~~------------------------  248 (364)
                      ++...  ....+++.  .   ...|..+.+ +   .+.+.   |++|++|++.|..                        
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~  533 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH  533 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            77653  23334433  1   123444432 2   22221   4599999999831                        


Q ss_pred             -hhHHHHHhhccC---CCEEEEEccC
Q 017901          249 -ETERLGLNFLKR---GGHYMTLHGE  270 (364)
Q Consensus       249 -~~~~~~~~~l~~---~G~~v~~g~~  270 (364)
                       ..++.+++.+++   +|+++.++..
T Consensus       534 ~~l~~~~~~~l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        534 FLVAREAVRIMKAQGLGGSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCc
Confidence             123455666665   6899998864

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.77  E-value=0.00018  Score=65.68  Aligned_cols=106  Identities=20%  Similarity=0.258  Sum_probs=74.9

Q ss_pred             CccccCCCCCChhhhccccchHHHHHHHHHHhccc----CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-
Q 017901          138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARM----SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-  211 (364)
Q Consensus       138 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-  211 (364)
                      ..++++|+.+..+.++... +...++.++. .+..    .++++|+|.| +|.+|..+++.++..|+ +|+.+.++.++ 
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~-~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra  215 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVE-LAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA  215 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHH-HHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            4578889988877666553 3446666653 3332    4789999999 79999999999998876 56666766543 


Q ss_pred             -HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          212 -DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       212 -~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                       +++.++|.. +++.  .++.+.+.. +|+||.|++.+..
T Consensus       216 ~~la~~~g~~-~~~~--~~~~~~l~~-aDvVi~at~~~~~  251 (311)
T cd05213         216 EELAKELGGN-AVPL--DELLELLNE-ADVVISATGAPHY  251 (311)
T ss_pred             HHHHHHcCCe-EEeH--HHHHHHHhc-CCEEEECCCCCch
Confidence             667888874 3332  244555555 9999999999744

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.75  E-value=8.7e-05  Score=73.60  Aligned_cols=96  Identities=28%  Similarity=0.379  Sum_probs=66.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc----------------------cHHHHHHcCCceeeeCCC-
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----------------------SIDRVLAAGAEQAVDYSS-  227 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~----------------------~~~~~~~~g~~~v~~~~~-  227 (364)
                      ...+|++|+|.| +|+.|+.+++.++..|++|+++...+                      +.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            367899999999 89999999999999999988875321                      125578899876665432 


Q ss_pred             hhH-HHHhc-CCccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          228 KDI-ELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       228 ~~~-~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      .+. .+.+. + +|+||+++|........+.....+|.+..++
T Consensus       212 ~~~~~~~~~~~-~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~  253 (564)
T PRK12771        212 EDITLEQLEGE-FDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD  253 (564)
T ss_pred             CcCCHHHHHhh-CCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence            221 12222 5 9999999998744444455555555554443

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.71  E-value=0.00044  Score=61.06  Aligned_cols=142  Identities=18%  Similarity=0.172  Sum_probs=89.2

Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      ..+++||+++..+       +|.+|.. +...++++++++.+..+.--. +. ...+.+..  .+.++++|+-.| +|. 
T Consensus        65 ~p~~~g~~~~i~p-------~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~-~~l~~l~~--~~~~~~~VLDiG-cGs-  130 (250)
T PRK00517         65 HPIRIGDRLWIVP-------SWEDPPD-PDEINIELDPGMAFGTGTHPT-TR-LCLEALEK--LVLPGKTVLDVG-CGS-  130 (250)
T ss_pred             CCEEEcCCEEEEC-------CCcCCCC-CCeEEEEECCCCccCCCCCHH-HH-HHHHHHHh--hcCCCCEEEEeC-CcH-
Confidence            4477898887764       3666644 677789999988877544222 21 12223321  256889999999 665 


Q ss_pred             HHHHHHHHHHcCC-eEEEeeCCccH-HHH----HHcCCceeeeCCChhHHHHhcCCccEEEECCCCc---hhHHHHHhhc
Q 017901          188 GFAAVQFSVASGC-HVSATCGSKSI-DRV----LAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP---ETERLGLNFL  258 (364)
Q Consensus       188 G~~~~~~a~~~g~-~vi~~~~~~~~-~~~----~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~---~~~~~~~~~l  258 (364)
                      |.+++.+++ .|+ +|+++..++.. +.+    ...+....+.....+      .++|+|+.+....   ..+..+.+.|
T Consensus       131 G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~~------~~fD~Vvani~~~~~~~l~~~~~~~L  203 (250)
T PRK00517        131 GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQGD------LKADVIVANILANPLLELAPDLARLL  203 (250)
T ss_pred             HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccCC------CCcCEEEEcCcHHHHHHHHHHHHHhc
Confidence            888876655 566 59999776653 333    333331111111111      1399999876654   2456788899


Q ss_pred             cCCCEEEEEccC
Q 017901          259 KRGGHYMTLHGE  270 (364)
Q Consensus       259 ~~~G~~v~~g~~  270 (364)
                      ++||+++..|..
T Consensus       204 kpgG~lilsgi~  215 (250)
T PRK00517        204 KPGGRLILSGIL  215 (250)
T ss_pred             CCCcEEEEEECc
Confidence            999999998764

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.70  E-value=0.00025  Score=59.63  Aligned_cols=110  Identities=21%  Similarity=0.282  Sum_probs=79.8

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceeeeCCC
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAVDYSS  227 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~~~~~  227 (364)
                      -.+.-+.+.|. + .+...+++|++||-.|  .+.|+.++-+|+..| +|+.+-+.+.+     +.++.+|..+|.-...
T Consensus        53 qtis~P~~vA~-m-~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g  127 (209)
T COG2518          53 QTISAPHMVAR-M-LQLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHG  127 (209)
T ss_pred             ceecCcHHHHH-H-HHHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC
Confidence            33444455555 2 3678899999999999  347999999999988 99999887663     4477888865432211


Q ss_pred             h---hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          228 K---DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       228 ~---~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +   .+.+.  +++|.|+-+.+.+..-...++.|++||++|..-+
T Consensus       128 DG~~G~~~~--aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         128 DGSKGWPEE--APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             CcccCCCCC--CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            1   22221  3599999988887566789999999999997765

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.60  E-value=0.00037  Score=59.68  Aligned_cols=74  Identities=23%  Similarity=0.388  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC----ceeeeCCCh-hHHHHhc------CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA----EQAVDYSSK-DIELAIK------GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~----~~v~~~~~~-~~~~~i~------g~~D~  240 (364)
                      .++.++|+||++++|.++++.+...|++|+.+.|+.++  +++.+++.    ...+|.++. +....+.      |++|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            45789999999999999999999999999999998774  66778883    234555554 3222222      56999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      .+++.|-
T Consensus        85 LvNNAGl   91 (246)
T COG4221          85 LVNNAGL   91 (246)
T ss_pred             EEecCCC
Confidence            9999885

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.51  E-value=0.001  Score=62.23  Aligned_cols=94  Identities=21%  Similarity=0.282  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCceeeeCCC-hhHHHHhcCCccEEEECCC---C-
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAEQAVDYSS-KDIELAIKGKFDAVLDTIG---A-  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~~v~~~~~-~~~~~~i~g~~D~vid~~g---~-  247 (364)
                      +.+++|.| .|.+|+.+++.++.+|++|+++.++.++ +.+ ..++......... .++.+.+.+ +|++|+|++   . 
T Consensus       167 ~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~-aDvVI~a~~~~g~~  244 (370)
T TIGR00518       167 PGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKR-ADLLIGAVLIPGAK  244 (370)
T ss_pred             CceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHcc-CCEEEEccccCCCC
Confidence            45588999 7999999999999999998888766544 433 4455432222222 345555655 999999983   3 


Q ss_pred             -ch-hHHHHHhhccCCCEEEEEccC
Q 017901          248 -PE-TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       248 -~~-~~~~~~~~l~~~G~~v~~g~~  270 (364)
                       +. .....++.+++++.++.++..
T Consensus       245 ~p~lit~~~l~~mk~g~vIvDva~d  269 (370)
T TIGR00518       245 APKLVSNSLVAQMKPGAVIVDVAID  269 (370)
T ss_pred             CCcCcCHHHHhcCCCCCEEEEEecC
Confidence             21 136788889999999998854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.46  E-value=0.0016  Score=58.68  Aligned_cols=92  Identities=23%  Similarity=0.248  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~  252 (364)
                      .|++++|.| .|.+|..+++.++.+|++|++..++.++ ..+.+.|.. .+.  ..++.+.+.+ +|+||+|++..-.-.
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~-~~~--~~~l~~~l~~-aDiVint~P~~ii~~  224 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLI-PFP--LNKLEEKVAE-IDIVINTIPALVLTA  224 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-eec--HHHHHHHhcc-CCEEEECCChHHhCH
Confidence            578999999 7999999999999999999988877654 455566653 222  2234445555 999999998652224


Q ss_pred             HHHhhccCCCEEEEEccC
Q 017901          253 LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~  270 (364)
                      ..++.++++..++.++..
T Consensus       225 ~~l~~~k~~aliIDlas~  242 (287)
T TIGR02853       225 DVLSKLPKHAVIIDLASK  242 (287)
T ss_pred             HHHhcCCCCeEEEEeCcC
Confidence            577888999889888754

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.36  E-value=0.00063  Score=64.87  Aligned_cols=146  Identities=18%  Similarity=0.246  Sum_probs=91.5

Q ss_pred             cccccceeEEEEeecCCCCCCCCCCEEEEe-cC--------C----CCCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901           90 LILGRDISGEVAAVGASVRSLTVGQEVFGA-LH--------P----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (364)
Q Consensus        90 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~-~~--------~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (364)
                      ..-|+|+++-+.+|++++...-.|..-+.- ..        .    ...++.|++.        +++|+.+..+.. ...
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~-i~~  160 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETG-IGA  160 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcC-CCC
Confidence            345999999999999998775556543210 00        0    0122333332        455554443322 222


Q ss_pred             chHHHHHHHHHHhcc---cCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhH
Q 017901          157 FAALTAWRALKCAAR---MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDI  230 (364)
Q Consensus       157 ~~~~ta~~~l~~~~~---~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~  230 (364)
                      .+..+++.++.....   -.++++++|.| +|.+|.++++.++..|+ +|+.+.++.++  .++.++|.+ +++.  .+.
T Consensus       161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~  236 (423)
T PRK00045        161 GAVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL--DEL  236 (423)
T ss_pred             CCcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HHH
Confidence            234466666632221   25789999999 79999999999999998 67777776544  467777754 3333  344


Q ss_pred             HHHhcCCccEEEECCCCch
Q 017901          231 ELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       231 ~~~i~g~~D~vid~~g~~~  249 (364)
                      .+.+.+ +|+||+|+|.+.
T Consensus       237 ~~~l~~-aDvVI~aT~s~~  254 (423)
T PRK00045        237 PEALAE-ADIVISSTGAPH  254 (423)
T ss_pred             HHHhcc-CCEEEECCCCCC
Confidence            455556 999999999863

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.31  E-value=0.00098  Score=52.85  Aligned_cols=93  Identities=20%  Similarity=0.264  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH--HHHHHcCCc--eeeeCCChhHHHHhcCCccEEEECCCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI--DRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~--~~~~~~g~~--~v~~~~~~~~~~~i~g~~D~vid~~g~  247 (364)
                      -.+.+++|.| +|+.|.+++..+...|++ ++.+.|+.++  +++..++..  .++.++  ++.+.+.. +|+||.|++.
T Consensus        10 l~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~--~~~~~~~~-~DivI~aT~~   85 (135)
T PF01488_consen   10 LKGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE--DLEEALQE-ADIVINATPS   85 (135)
T ss_dssp             GTTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG--GHCHHHHT-ESEEEE-SST
T ss_pred             cCCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH--HHHHHHhh-CCeEEEecCC
Confidence            3588999999 799999999999999996 7777887665  455666332  233333  23334445 9999999988


Q ss_pred             chhHHHHHhhccCC----CEEEEEccC
Q 017901          248 PETERLGLNFLKRG----GHYMTLHGE  270 (364)
Q Consensus       248 ~~~~~~~~~~l~~~----G~~v~~g~~  270 (364)
                      +.. ...-..+...    +.++.++.+
T Consensus        86 ~~~-~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   86 GMP-IITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             TST-SSTHHHHTTTCHHCSEEEES-SS
T ss_pred             CCc-ccCHHHHHHHHhhhhceeccccC
Confidence            622 2122233333    577877654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.26  E-value=0.004  Score=54.30  Aligned_cols=97  Identities=22%  Similarity=0.385  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHc---CCceee--eCCChh-HH---HHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAA---GAEQAV--DYSSKD-IE---LAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~---g~~~v~--~~~~~~-~~---~~i~---g~~D  239 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.++++++. ..+ .++   +..+.+  |..+.+ ..   +.+.   +++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46799999999999999999999999999999887653 222 222   222222  223221 21   1211   3489


Q ss_pred             EEEECCCCch-----------------------hHHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPE-----------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++.+.|...                       .++...++++++|+++.++..
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            9999987521                       144556677788999998864

>PRK12742 oxidoreductase; Provisional

Probab=97.26  E-value=0.0037  Score=54.43  Aligned_cols=97  Identities=23%  Similarity=0.366  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-cc-H-HHHHHcCCcee-eeCCCh-hHHHHhc--CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KS-I-DRVLAAGAEQA-VDYSSK-DIELAIK--GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~-~-~~~~~~g~~~v-~~~~~~-~~~~~i~--g~~D~vid~~g  246 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++ ++ . +...+.++..+ .|..+. .+.+.+.  +++|++|++.|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag   84 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG   84 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence            46899999999999999999999999998877543 22 2 33344554422 343333 2222222  45999999987


Q ss_pred             Cch---h----------------------HHHHHhhccCCCEEEEEccC
Q 017901          247 APE---T----------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       247 ~~~---~----------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ...   .                      ...+.+.++.+|+++.++..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  133 (237)
T PRK12742         85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV  133 (237)
T ss_pred             CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence            520   0                      13444556678999988754

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0039  Score=55.75  Aligned_cols=72  Identities=22%  Similarity=0.316  Sum_probs=51.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCCh-hH---HHHhc---CCccEEEECCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSK-DI---ELAIK---GKFDAVLDTIG  246 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~-~~---~~~i~---g~~D~vid~~g  246 (364)
                      ++++|+||+|++|..+++.+...|++|+++.++.+. +.+.+.+...+ .|..+. ++   .+.+.   +++|++|++.|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            479999999999999999999999999999887654 44444454332 355443 22   22221   45999999998


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        82 ~   82 (274)
T PRK05693         82 Y   82 (274)
T ss_pred             C
Confidence            4

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0047  Score=55.40  Aligned_cols=74  Identities=22%  Similarity=0.364  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChh----HHHHh----cCCccEEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKD----IELAI----KGKFDAVLD  243 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~----~~~~i----~g~~D~vid  243 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+. +.+.+.+...+ .|..+.+    +.+.+    .|++|++|.
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            46789999999999999999998899999999887654 44555554432 3444432    22222    145899999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        83 ~Ag~   86 (277)
T PRK05993         83 NGAY   86 (277)
T ss_pred             CCCc
Confidence            9873

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.20  E-value=0.0023  Score=53.42  Aligned_cols=91  Identities=29%  Similarity=0.385  Sum_probs=65.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCCc----hhH
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGAP----ETE  251 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~~----~~~  251 (364)
                      |+|.||+|.+|..+++.+...|.+|++++|++.+... ..+.+.+ .|..+. ++.+.+.+ +|+||.++|..    ...
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~-~d~vi~~~~~~~~~~~~~   78 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKG-ADAVIHAAGPPPKDVDAA   78 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTT-SSEEEECCHSTTTHHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhh-cchhhhhhhhhccccccc
Confidence            7899999999999999999999999999998775222 3444322 233343 45566667 99999999842    245


Q ss_pred             HHHHhhccCCC--EEEEEccC
Q 017901          252 RLGLNFLKRGG--HYMTLHGE  270 (364)
Q Consensus       252 ~~~~~~l~~~G--~~v~~g~~  270 (364)
                      ...++.++..|  +++.++..
T Consensus        79 ~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   79 KNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             HHHHHHHHHTTSSEEEEEEET
T ss_pred             ccccccccccccccceeeecc
Confidence            66666665544  77877754

...

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.17  E-value=0.0058  Score=54.47  Aligned_cols=97  Identities=21%  Similarity=0.320  Sum_probs=72.2

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...||+....+..+.+..---.|.+++|.|.+..+|.-++.++...|++|+.+.+..                  .++.+
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t------------------~~l~~  197 (286)
T PRK14175        136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS------------------KDMAS  197 (286)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------hhHHH
Confidence            345777666666664332234789999999777799999999999999999875432                  23444


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+||.++|.+..+..  +.+++|..++.+|..
T Consensus       198 ~~~~-ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        198 YLKD-ADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             HHhh-CCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence            5555 9999999999855544  578999999999875

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.15  E-value=0.0045  Score=60.37  Aligned_cols=102  Identities=22%  Similarity=0.229  Sum_probs=67.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHH--------cCC------ce-eeeCCCh-h
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLA--------AGA------EQ-AVDYSSK-D  229 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~--------~g~------~~-v~~~~~~-~  229 (364)
                      ...+.+.|++++|.||+|.+|..+++.+...|++|+++.++.+. . .+..        .|.      .. ..|..+. +
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            44566789999999999999999999999999999999887654 2 2221        121      11 2244443 3


Q ss_pred             HHHHhcCCccEEEECCCCch---------------hHHHHHhhccC--CCEEEEEccC
Q 017901          230 IELAIKGKFDAVLDTIGAPE---------------TERLGLNFLKR--GGHYMTLHGE  270 (364)
Q Consensus       230 ~~~~i~g~~D~vid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~  270 (364)
                      +...+.+ +|+||.|.|...               ....+++.+..  .++||.++..
T Consensus       153 I~~aLgg-iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi  209 (576)
T PLN03209        153 IGPALGN-ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL  209 (576)
T ss_pred             HHHHhcC-CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence            4444445 999999998531               12233444433  3689988764

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.08  E-value=0.014  Score=49.50  Aligned_cols=98  Identities=22%  Similarity=0.329  Sum_probs=67.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-H----HHHHcC-Cce--eeeCCChhHHHHhcCC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-D----RVLAAG-AEQ--AVDYSSKDIELAIKGK  237 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~----~~~~~g-~~~--v~~~~~~~~~~~i~g~  237 (364)
                      ....+.++++++-.| +|. |..++.+++..+  .+|+++..+++. +    .++.++ .+.  ++..+..++.....++
T Consensus        34 ~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~  111 (198)
T PRK00377         34 SKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEK  111 (198)
T ss_pred             HHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCC
Confidence            456788999999999 565 999999998764  589999776553 3    345566 332  2222333333333345


Q ss_pred             ccEEEECCCC---chhHHHHHhhccCCCEEEEE
Q 017901          238 FDAVLDTIGA---PETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       238 ~D~vid~~g~---~~~~~~~~~~l~~~G~~v~~  267 (364)
                      +|.||...+.   ...+..+.+.|+++|+++..
T Consensus       112 ~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        112 FDRIFIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             CCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence            9999986653   23677888999999999853

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.07  E-value=0.0022  Score=54.71  Aligned_cols=106  Identities=23%  Similarity=0.316  Sum_probs=69.7

Q ss_pred             hHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-----HHHHHcCCcee--eeCCCh
Q 017901          158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-----DRVLAAGAEQA--VDYSSK  228 (364)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~  228 (364)
                      +.+.|. ++ +...+++|++||-.|  ++.|+.++-+++..|.  +|+++...++.     +.+.+++.+.+  +..+..
T Consensus        58 P~~~a~-~l-~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~  133 (209)
T PF01135_consen   58 PSMVAR-ML-EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGS  133 (209)
T ss_dssp             HHHHHH-HH-HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GG
T ss_pred             HHHHHH-HH-HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchh
Confidence            344444 33 667799999999998  3468999999988875  68888777663     34566676543  222211


Q ss_pred             -hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          229 -DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       229 -~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                       .+.+  .+++|.|+-+.+-+..-...++.|++||++|..-.
T Consensus       134 ~g~~~--~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~  173 (209)
T PF01135_consen  134 EGWPE--EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG  173 (209)
T ss_dssp             GTTGG--G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred             hcccc--CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence             1111  13599999998887566789999999999998543

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06182 short chain dehydrogenase; Validated

Probab=97.04  E-value=0.0079  Score=53.71  Aligned_cols=74  Identities=20%  Similarity=0.364  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-eeeCCChh-HHHHhc------CCccEEEEC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSKD-IELAIK------GKFDAVLDT  244 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~~-~~~~i~------g~~D~vid~  244 (364)
                      .+++++|+|++|.+|..+++.+...|++|+++.++.+. ..+.+.+... ..|..+.+ +...+.      +++|++|.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            36789999999999999999998999999999887654 3333344432 23444432 222221      459999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        82 ag~   84 (273)
T PRK06182         82 AGY   84 (273)
T ss_pred             CCc
Confidence            984

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.04  E-value=0.0065  Score=54.08  Aligned_cols=96  Identities=16%  Similarity=0.263  Sum_probs=71.6

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ..||+.......|.+..---.|++++|.|.+..+|.-++.++...|++|+.+.+                  .+.++.+.
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs------------------~t~~l~~~  198 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS------------------KTRDLAAH  198 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC------------------CCCCHHHH
Confidence            457766666666643322347999999998888899999999999999987532                  22334444


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|+|+-++|.+..+..  +++++|..++.+|..
T Consensus       199 ~~~-ADIVV~avG~~~~i~~--~~ik~gavVIDVGin  232 (285)
T PRK14189        199 TRQ-ADIVVAAVGKRNVLTA--DMVKPGATVIDVGMN  232 (285)
T ss_pred             hhh-CCEEEEcCCCcCccCH--HHcCCCCEEEEcccc
Confidence            544 9999999999855443  899999999999965

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.03  E-value=0.0084  Score=49.28  Aligned_cols=97  Identities=19%  Similarity=0.252  Sum_probs=67.7

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...|+....+...+.+...--.|.+++|.|++..+|..++..++..|++|+.+.+..                  +++.+
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~------------------~~l~~   83 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT------------------KNLKE   83 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc------------------hhHHH
Confidence            444665556666554444446789999999544579999999999999877766542                  23444


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.. +|+||.+++.+..+.  .+.++++-.++.++.+
T Consensus        84 ~l~~-aDiVIsat~~~~ii~--~~~~~~~~viIDla~p  118 (168)
T cd01080          84 HTKQ-ADIVIVAVGKPGLVK--GDMVKPGAVVIDVGIN  118 (168)
T ss_pred             HHhh-CCEEEEcCCCCceec--HHHccCCeEEEEccCC
Confidence            4545 999999999974333  3457777788888765

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.01  E-value=0.0034  Score=52.26  Aligned_cols=74  Identities=18%  Similarity=0.325  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC---ceeeeCCChh----HHHHhc---CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA---EQAVDYSSKD----IELAIK---GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~---~~v~~~~~~~----~~~~i~---g~~D~vi  242 (364)
                      -|.+|||+||++++|+..++-...+|-+||.+.|++++ +.+.....   ..+.|..+.+    +.+.+.   ...++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            47899999999999999999999999999999998775 55544332   2355554443    555555   2378888


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      +|.|-
T Consensus        84 NNAGI   88 (245)
T COG3967          84 NNAGI   88 (245)
T ss_pred             ecccc
Confidence            88774

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.00  E-value=0.0032  Score=55.36  Aligned_cols=76  Identities=16%  Similarity=0.243  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC----Cc-ee--eeCCChhHH----HHhc---C
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG----AE-QA--VDYSSKDIE----LAIK---G  236 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g----~~-~v--~~~~~~~~~----~~i~---g  236 (364)
                      ..+.+++|+||++++|...+..+...|.+|+.+.|++++  +++.++.    .. ++  +|..+.+-.    +.+.   +
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999999874  3333333    21 12  344443322    2222   2


Q ss_pred             CccEEEECCCCc
Q 017901          237 KFDAVLDTIGAP  248 (364)
Q Consensus       237 ~~D~vid~~g~~  248 (364)
                      .+|+.+++.|-.
T Consensus        84 ~IdvLVNNAG~g   95 (265)
T COG0300          84 PIDVLVNNAGFG   95 (265)
T ss_pred             cccEEEECCCcC
Confidence            499999999853

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.98  E-value=0.0054  Score=57.58  Aligned_cols=111  Identities=18%  Similarity=0.166  Sum_probs=73.0

Q ss_pred             ccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHH
Q 017901          155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       155 ~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      +..+....+..+.+...+++|++||-.| + +.|..+..+++..|++|+++..+++. +.+++......++....++.+ 
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~-  224 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRD-  224 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhh-
Confidence            3334445566566778889999999999 4 47888899999889999999877665 555443322111111112211 


Q ss_pred             hcCCccEEEEC-----CCC---chhHHHHHhhccCCCEEEEEc
Q 017901          234 IKGKFDAVLDT-----IGA---PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       234 i~g~~D~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +.+.+|.|+..     +|.   ...+..+.+.|+|||.++...
T Consensus       225 l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        225 LNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             cCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            12448988753     443   236788899999999998754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.011  Score=57.05  Aligned_cols=74  Identities=24%  Similarity=0.330  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH----HHHHHcCCce-eeeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----DRVLAAGAEQ-AVDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~~~~g~~~-v~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      ++++++|+|++|++|..+++.+...|++|+++.+++..    +...+++... .+|..+.+    +.+.+.   +++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            57899999999999999999999999999998765432    2334455432 23544432    222222   459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus       289 i~~AG~  294 (450)
T PRK08261        289 VHNAGI  294 (450)
T ss_pred             EECCCc
Confidence            999984

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.97  E-value=0.0027  Score=56.67  Aligned_cols=103  Identities=28%  Similarity=0.384  Sum_probs=62.1

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCceeeeCCChhHHHHhcCC
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQAVDYSSKDIELAIKGK  237 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v~~~~~~~~~~~i~g~  237 (364)
                      +..+.+++++++|++||-.| +| .|..+..+|+..|++|++++.++++ +    .+++.|...-+.....++.+ +.++
T Consensus        51 ~~~~~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~-~~~~  127 (273)
T PF02353_consen   51 LDLLCEKLGLKPGDRVLDIG-CG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRD-LPGK  127 (273)
T ss_dssp             HHHHHTTTT--TT-EEEEES--T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG----S
T ss_pred             HHHHHHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccc-cCCC
Confidence            33345788999999999999 45 8999999999999999999887764 3    34566643211111111111 1124


Q ss_pred             ccEEEE-----CCCCc---hhHHHHHhhccCCCEEEEEc
Q 017901          238 FDAVLD-----TIGAP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       238 ~D~vid-----~~g~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|.|+.     .+|..   ..+..+.++|+|||+++.-.
T Consensus       128 fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  128 FDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             -SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             CCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence            888765     46543   35788899999999997443

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.96  E-value=0.0091  Score=53.89  Aligned_cols=96  Identities=17%  Similarity=0.127  Sum_probs=59.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHH----HHcCCceeeeCCChhHHHHhcCCccEEEECC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRV----LAAGAEQAVDYSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~----~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~  245 (364)
                      ..++++|+-.| +|. |.+++.+++ .|+ +|+++..++.. +.+    ...+....+.....+......+++|+|+...
T Consensus       157 ~~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~  233 (288)
T TIGR00406       157 DLKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI  233 (288)
T ss_pred             cCCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence            45789999999 665 888877776 465 89999766543 333    3333321111101111111223599999866


Q ss_pred             CCc---hhHHHHHhhccCCCEEEEEccC
Q 017901          246 GAP---ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       246 g~~---~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ...   ..+..+.+.|++||.++..|..
T Consensus       234 ~~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       234 LAEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            543   3567788999999999988754

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.011  Score=52.49  Aligned_cols=97  Identities=20%  Similarity=0.274  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-ee--eeCCChh-HH---HHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSKD-IE---LAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~~-~~---~~i~---g~~D~v  241 (364)
                      .+++++|+|+++++|..+++.+...|++|+.+.++.+.  +...+++.. .+  .|..+.+ +.   +.+.   +++|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999887653  334454432 12  2333332 22   2221   458999


Q ss_pred             EECCCCch------------------------hHHHHHhhc-cCCCEEEEEccC
Q 017901          242 LDTIGAPE------------------------TERLGLNFL-KRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~  270 (364)
                      |.+.|...                        ..+.++..+ +.+|++|.++..
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~  138 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSI  138 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECch
Confidence            99987420                        122334444 567899988754

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.92  E-value=0.012  Score=47.82  Aligned_cols=98  Identities=18%  Similarity=0.327  Sum_probs=62.8

Q ss_pred             hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE  231 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (364)
                      -..+|++....+..|....---.|++++|.|.+..+|.-+..++...|++|+.+.+..                  .++.
T Consensus        13 ~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T------------------~~l~   74 (160)
T PF02882_consen   13 PGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT------------------KNLQ   74 (160)
T ss_dssp             TSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS------------------SSHH
T ss_pred             CCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC------------------Cccc
Confidence            3455666666666664433345789999999888999999999999999988764332                  2233


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.++. +|+|+.++|.+..+.  .+++++|..++.+|..
T Consensus        75 ~~~~~-ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~  110 (160)
T PF02882_consen   75 EITRR-ADIVVSAVGKPNLIK--ADWIKPGAVVIDVGIN  110 (160)
T ss_dssp             HHHTT-SSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred             ceeee-ccEEeeeeccccccc--cccccCCcEEEecCCc
Confidence            34444 999999999984443  4688999999999865

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.92  E-value=0.016  Score=52.86  Aligned_cols=97  Identities=26%  Similarity=0.356  Sum_probs=67.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHhc--CCc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAIK--GKF  238 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i~--g~~  238 (364)
                      +...++++++||..| +| .|..++.+++..+.  .|+++..+++.     +.+.+.|.+.+.... .+..+...  +++
T Consensus        74 ~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-gD~~~~~~~~~~f  150 (322)
T PRK13943         74 EWVGLDKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-GDGYYGVPEFAPY  150 (322)
T ss_pred             HhcCCCCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CChhhcccccCCc
Confidence            456788999999999 55 69999999998764  68888776653     234556765433221 12222111  349


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~  267 (364)
                      |+|+.+.+.........+.|+++|+++..
T Consensus       151 D~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        151 DVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             cEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            99999988765666888999999998764

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.012  Score=54.27  Aligned_cols=74  Identities=19%  Similarity=0.266  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce---eeeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ---AVDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+||+|++|..+++.+...|++|+.+.++++. +    .+++.|...   ..|..+.+ +   .+.+.   |++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            46789999999999999999999999999999887653 2    233445432   13444432 2   22221   569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|++.|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999985

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.91  E-value=0.012  Score=52.28  Aligned_cols=96  Identities=19%  Similarity=0.324  Sum_probs=71.1

Q ss_pred             ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901          153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE  231 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (364)
                      +..||+....+..| +..++ -.|++|+|.|.+..+|.-++.++...|++|+.+.+                  .+.++.
T Consensus       135 ~~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs------------------~t~~l~  195 (285)
T PRK14191        135 GFVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI------------------LTKDLS  195 (285)
T ss_pred             CCCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC------------------CcHHHH
Confidence            34577776666666 44444 36999999997779999999999999999887632                  122334


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.++. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       196 ~~~~~-ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~  231 (285)
T PRK14191        196 FYTQN-ADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHh-CCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence            44444 999999999984433  5678999999999964

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.87  E-value=0.021  Score=47.19  Aligned_cols=99  Identities=20%  Similarity=0.239  Sum_probs=70.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-----HHHHHcCCce--eeeCCChhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-----DRVLAAGAEQ--AVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-----~~~~~~g~~~--v~~~~~~~~~~~i~g~~D  239 (364)
                      ....+++|+.++=.|+.  .|..++++++.. ..+|+++.++++.     ..++++|.+.  ++..+.++....+. .+|
T Consensus        28 s~L~~~~g~~l~DIGaG--tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~d  104 (187)
T COG2242          28 SKLRPRPGDRLWDIGAG--TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPD  104 (187)
T ss_pred             HhhCCCCCCEEEEeCCC--ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCC
Confidence            45678999988888843  588888998544 3499999887763     3467888774  44444444333332 389


Q ss_pred             EEEECCCCc--hhHHHHHhhccCCCEEEEEcc
Q 017901          240 AVLDTIGAP--ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       240 ~vid~~g~~--~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .+|---|..  ..++.++..|+++|++|.-..
T Consensus       105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         105 AIFIGGGGNIEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             EEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence            998765542  478899999999999997654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.87  E-value=0.0074  Score=50.30  Aligned_cols=89  Identities=19%  Similarity=0.162  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHH-HHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch--
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE--  249 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~--  249 (364)
                      -.|.+|.|.| .|.+|..+++.++.+|++|++..+...... ....++.    +.  ++.+.+.. .|+|+.+....+  
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~--~l~ell~~-aDiv~~~~plt~~T  105 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YV--SLDELLAQ-ADIVSLHLPLTPET  105 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ES--SHHHHHHH--SEEEE-SSSSTTT
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce----ee--ehhhhcch-hhhhhhhhcccccc
Confidence            3589999999 899999999999999999999998877643 5555542    11  23333334 899999887432  


Q ss_pred             ---hHHHHHhhccCCCEEEEEcc
Q 017901          250 ---TERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ---~~~~~~~~l~~~G~~v~~g~  269 (364)
                         .-...+..++++..+|.++-
T Consensus       106 ~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  106 RGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             TTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ceeeeeeeeeccccceEEEeccc
Confidence               12577899999999998874

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.87  E-value=0.014  Score=51.74  Aligned_cols=108  Identities=20%  Similarity=0.213  Sum_probs=75.0

Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHh
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAI  234 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i  234 (364)
                      ..++..+.++.++++|+++|=.|  ++-|.+++.+|+..|++|++++-++++     +.+++.|...-+...-.++.+.-
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~  135 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFE  135 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccc
Confidence            35566666889999999999999  448999999999999999999887764     33567776521111111111111


Q ss_pred             cCCccEEE-----ECCCCc---hhHHHHHhhccCCCEEEEEccC
Q 017901          235 KGKFDAVL-----DTIGAP---ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       235 ~g~~D~vi-----d~~g~~---~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                       +++|-|+     +.+|..   .-+..+-++|+++|++++....
T Consensus       136 -e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         136 -EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             -cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence             2366654     456662   3577889999999999877654

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.84  E-value=0.02  Score=46.32  Aligned_cols=101  Identities=20%  Similarity=0.193  Sum_probs=66.5

Q ss_pred             HHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCcc
Q 017901          162 AWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       162 a~~~l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D  239 (364)
                      .+.++.+. ...-.|++++|.| -|.+|...++.++.+|++|+++..++.+ -.+..-|+. +.     .+.+.+.. .|
T Consensus         9 ~~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~-----~~~~a~~~-ad   80 (162)
T PF00670_consen    9 LVDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VM-----TLEEALRD-AD   80 (162)
T ss_dssp             HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE------HHHHTTT--S
T ss_pred             HHHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ec-----CHHHHHhh-CC
Confidence            34444333 3346899999999 9999999999999999999999766554 445556664 22     23444444 89


Q ss_pred             EEEECCCCchh-HHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPET-ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|-++|.... ..+-++.|+.+..+..+|..
T Consensus        81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~  112 (162)
T PF00670_consen   81 IFVTATGNKDVITGEHFRQMKDGAILANAGHF  112 (162)
T ss_dssp             EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred             EEEECCCCccccCHHHHHHhcCCeEEeccCcC
Confidence            99999998754 45888999999988888865

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.84  E-value=0.014  Score=51.94  Aligned_cols=95  Identities=17%  Similarity=0.232  Sum_probs=72.1

Q ss_pred             cccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ..||+....+..+ +..++ -.|++++|.|.+..+|.-++.++...|++|+.+.+.                  +.++.+
T Consensus       138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~------------------T~~l~~  198 (285)
T PRK10792        138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF------------------TKNLRH  198 (285)
T ss_pred             CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC------------------CCCHHH
Confidence            4577776677666 44444 369999999988889999999999999999887442                  223444


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|++|.++|.+..+.  -+.+++|..++.+|..
T Consensus       199 ~~~~-ADIvi~avG~p~~v~--~~~vk~gavVIDvGin  233 (285)
T PRK10792        199 HVRN-ADLLVVAVGKPGFIP--GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             HHhh-CCEEEEcCCCccccc--HHHcCCCcEEEEcccc
Confidence            4444 999999999985444  3889999999999954

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.83  E-value=0.022  Score=45.28  Aligned_cols=96  Identities=18%  Similarity=0.201  Sum_probs=70.4

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ..++........+....---.|++++|.|.+..+|.-++.++...|++|+.+.+...                  ++.+.
T Consensus         7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~------------------~l~~~   68 (140)
T cd05212           7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI------------------QLQSK   68 (140)
T ss_pred             ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc------------------CHHHH
Confidence            445555555555544333347999999999999999999999999999988854321                  23334


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|+|+-++|.+..++  -+++++|..++.+|..
T Consensus        69 v~~-ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~  102 (140)
T cd05212          69 VHD-ADVVVVGSPKPEKVP--TEWIKPGATVINCSPT  102 (140)
T ss_pred             Hhh-CCEEEEecCCCCccC--HHHcCCCCEEEEcCCC
Confidence            444 999999999984443  6789999999988864

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.82  E-value=0.015  Score=52.21  Aligned_cols=97  Identities=19%  Similarity=0.270  Sum_probs=72.0

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      +..||+.......|....---.|++|.+.|.++.+|.-.+.++...|++|+...+...                  +..+
T Consensus       137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~------------------~l~e  198 (301)
T PRK14194        137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST------------------DAKA  198 (301)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC------------------CHHH
Confidence            3457777666666644333347999999997779999999999999999998844322                  2333


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+||-++|.+..+...+  +++|..+|.+|..
T Consensus       199 ~~~~-ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin  233 (301)
T PRK14194        199 LCRQ-ADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN  233 (301)
T ss_pred             HHhc-CCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence            3444 999999999986665544  9999999999864

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.022  Score=49.99  Aligned_cols=96  Identities=20%  Similarity=0.351  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H-H---HHHcCCc-e--eeeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D-R---VLAAGAE-Q--AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~-~---~~~~g~~-~--v~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+|++|.+|..+++.+...|.+|+++.++...  + .   +...+.. .  ..|..+.+ +   .+.+.   ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999998899999988775431  1 1   2222322 1  12444332 2   22221   34


Q ss_pred             ccEEEECCCCc-------------------hhHHHHHhhccCCCEEEEEcc
Q 017901          238 FDAVLDTIGAP-------------------ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|++|.+.|..                   ..++.+.+.+..+|+++.++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            89999888642                   123455555666789988865

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.73  E-value=0.018  Score=51.69  Aligned_cols=96  Identities=18%  Similarity=0.295  Sum_probs=71.5

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee-CCccHHHHHHcCCceeeeCCChhHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDIE  231 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~~  231 (364)
                      +..||+....+..|....---.|++|+|.|.++.+|.-++.++...|++|++.. ++..                   +.
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-------------------l~  196 (296)
T PRK14188        136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-------------------LP  196 (296)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-------------------HH
Confidence            345777666666664432235799999999999999999999999999999873 3331                   22


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.++. .|+|+-++|.+..+...  ++++|..++.+|..
T Consensus       197 e~~~~-ADIVIsavg~~~~v~~~--~lk~GavVIDvGin  232 (296)
T PRK14188        197 AVCRR-ADILVAAVGRPEMVKGD--WIKPGATVIDVGIN  232 (296)
T ss_pred             HHHhc-CCEEEEecCChhhcchh--eecCCCEEEEcCCc
Confidence            33334 89999999998655544  39999999999865

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.72  E-value=0.02  Score=48.41  Aligned_cols=74  Identities=30%  Similarity=0.326  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCce-eeeCCC-hhHHHHhcCCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAEQ-AVDYSS-KDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~~-v~~~~~-~~~~~~i~g~~D~vid~~  245 (364)
                      .+.+++|.|++|.+|..++..+...|++|+.+.++.++  ....++    +... ..+..+ .++.+.+.+ +|+||.++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~diVi~at  105 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG-ADVVFAAG  105 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc-CCEEEECC
Confidence            56899999988999999998888889999988876553  223322    2221 122222 344455556 99999998


Q ss_pred             CCc
Q 017901          246 GAP  248 (364)
Q Consensus       246 g~~  248 (364)
                      ...
T Consensus       106 ~~g  108 (194)
T cd01078         106 AAG  108 (194)
T ss_pred             CCC
Confidence            876

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.71  E-value=0.0091  Score=48.88  Aligned_cols=90  Identities=21%  Similarity=0.357  Sum_probs=63.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc----eeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE----QAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      +|.|.||+|.+|....+-|+.+|-.|++++|++.+..++ .+.+    .+++.  ..+.+.+.| +|+||++.|...   
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~~~~i~q~Difd~--~~~a~~l~g-~DaVIsA~~~~~~~~   77 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-QGVTILQKDIFDL--TSLASDLAG-HDAVISAFGAGASDN   77 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-ccceeecccccCh--hhhHhhhcC-CceEEEeccCCCCCh
Confidence            588999999999999999999999999999998763222 1111    12222  234456668 999999988651   


Q ss_pred             ------hHHHHHhhccCCC--EEEEEccC
Q 017901          250 ------TERLGLNFLKRGG--HYMTLHGE  270 (364)
Q Consensus       250 ------~~~~~~~~l~~~G--~~v~~g~~  270 (364)
                            ..+..+..|+.-|  |+..+|+.
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence                  1234666777643  78888875

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.011  Score=53.60  Aligned_cols=74  Identities=16%  Similarity=0.200  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC--ce-e--eeCCChh----HHHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA--EQ-A--VDYSSKD----IELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~--~~-v--~~~~~~~----~~~~i~---g~~D  239 (364)
                      .|++++|+|++|++|..+++.+...|++|+.+.++.+.  +...+++.  .. .  .|..+.+    +.+.+.   |++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999876653  33455542  11 1  3444432    222221   5699


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|++.|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999985

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.68  E-value=0.014  Score=55.51  Aligned_cols=144  Identities=18%  Similarity=0.272  Sum_probs=92.1

Q ss_pred             cccccceeEEEEeecCCCCCCCCCCEEEEecC--------------CCCCCCcceeEEeecCCcccc---C-CCCCChhh
Q 017901           90 LILGRDISGEVAAVGASVRSLTVGQEVFGALH--------------PTAVRGTYADYAVLSEDELTP---K-PVSVTHAD  151 (364)
Q Consensus        90 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~--------------~~~~~g~~~~~~~~~~~~~~~---i-p~~~~~~~  151 (364)
                      ..-|.|+++-+.+|++++...-.|+.-+ +..              +...++.|++++.++. .+..   | +..+|...
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI-~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~  165 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSMVVGETQI-LGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISS  165 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhhhcCChHH-HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHH
Confidence            3458899999999999887755565443 110              1124567888877766 2221   3 22233221


Q ss_pred             hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHHHcCCceeeeCCCh
Q 017901          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGAEQAVDYSSK  228 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~  228 (364)
                      +         |.....+.....++++++|.| +|.+|..+++.++..| .+|+++.++.++  +++.++|.. .++.  .
T Consensus       166 ~---------Av~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~--~  232 (417)
T TIGR01035       166 A---------AVELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF--E  232 (417)
T ss_pred             H---------HHHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH--H
Confidence            1         111112333446789999999 7999999999999999 578888776554  466777764 3322  3


Q ss_pred             hHHHHhcCCccEEEECCCCch
Q 017901          229 DIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~~  249 (364)
                      ++.+.+.+ +|+||+|++.+.
T Consensus       233 ~l~~~l~~-aDvVi~aT~s~~  252 (417)
T TIGR01035       233 DLEEYLAE-ADIVISSTGAPH  252 (417)
T ss_pred             HHHHHHhh-CCEEEECCCCCC
Confidence            45555556 999999999863

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.68  E-value=0.014  Score=53.54  Aligned_cols=93  Identities=20%  Similarity=0.241  Sum_probs=63.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCCh-hHHHHhcCCccEEEECCCCch----
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSK-DIELAIKGKFDAVLDTIGAPE----  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~-~~~~~i~g~~D~vid~~g~~~----  249 (364)
                      +|+|+||+|.+|..+++.+...|.+|++++|+.+. ..+...+++.+. |..+. ++...+.| +|+||.+++...    
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g-~d~Vi~~~~~~~~~~~   80 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKG-VTAIIDASTSRPSDLY   80 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCC-CCEEEECCCCCCCCcc
Confidence            69999999999999999999999999999987554 334445654332 33333 45566667 999999876421    


Q ss_pred             --------hHHHHHhhccCCC--EEEEEccC
Q 017901          250 --------TERLGLNFLKRGG--HYMTLHGE  270 (364)
Q Consensus       250 --------~~~~~~~~l~~~G--~~v~~g~~  270 (364)
                              .....++.++..|  ++|.++..
T Consensus        81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                    1134455555544  78887753

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.0081  Score=55.37  Aligned_cols=74  Identities=19%  Similarity=0.369  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce---eeeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ---AVDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~----~~~~i~---g~~  238 (364)
                      .+++++|+|+++++|..+++.+...|++|+.+.++++. +    .+++.|.+.   ..|..+.+    +.+.+.   |++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999887653 2    234455542   23444432    222221   559


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|++.|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.63  E-value=0.022  Score=48.66  Aligned_cols=98  Identities=19%  Similarity=0.118  Sum_probs=64.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-H----HHHHcCCc---eeeeCCChhHHHHhcCC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-D----RVLAAGAE---QAVDYSSKDIELAIKGK  237 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~----~~~~~g~~---~v~~~~~~~~~~~i~g~  237 (364)
                      +...++++++||-.| + +.|..++.+++..+  .+|+++..+++. +    .+.+.+..   .++..+..+..... ++
T Consensus        66 ~~l~~~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~-~~  142 (205)
T PRK13944         66 ELIEPRPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKH-AP  142 (205)
T ss_pred             HhcCCCCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccC-CC
Confidence            556778999999998 3 45888888888764  589999777653 2    33445543   22332221111111 34


Q ss_pred             ccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+|+-+.........+.+.|++||+++..-
T Consensus       143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~  173 (205)
T PRK13944        143 FDAIIVTAAASTIPSALVRQLKDGGVLVIPV  173 (205)
T ss_pred             ccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence            9999877665546678889999999997653

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.61  E-value=0.027  Score=50.51  Aligned_cols=94  Identities=16%  Similarity=0.240  Sum_probs=63.7

Q ss_pred             cchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc
Q 017901          156 PFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK  235 (364)
Q Consensus       156 ~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~  235 (364)
                      +++.......|....---.|++++|.|+++.+|...+.++...|++|+.+.+. .                 .++.+.++
T Consensus       140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~-t-----------------~~L~~~~~  201 (283)
T PRK14192        140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR-T-----------------QNLPELVK  201 (283)
T ss_pred             CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC-c-----------------hhHHHHhc
Confidence            44442233334333334578999999965569999999999999977766541 1                 12233334


Q ss_pred             CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          236 GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       236 g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      + +|++|.++|.+..+  -.+.++++..++.+|..
T Consensus       202 ~-aDIvI~AtG~~~~v--~~~~lk~gavViDvg~n  233 (283)
T PRK14192        202 Q-ADIIVGAVGKPELI--KKDWIKQGAVVVDAGFH  233 (283)
T ss_pred             c-CCEEEEccCCCCcC--CHHHcCCCCEEEEEEEe
Confidence            4 99999999987433  34679999999999854

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.032  Score=48.47  Aligned_cols=74  Identities=24%  Similarity=0.432  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC---ceee--eCCCh-hHHH---Hhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA---EQAV--DYSSK-DIEL---AIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~---~~v~--~~~~~-~~~~---~i~---g~~D  239 (364)
                      .+.+++|+||+|.+|..+++.+...|++|+++.++...  ....++..   -+.+  |..+. ++.+   .+.   +++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            46889999999999999999998889999999876543  23333321   1222  33332 2222   221   3499


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.02  Score=50.89  Aligned_cols=97  Identities=13%  Similarity=0.197  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHc----CCc-ee--eeCCChh----HHHHhc--CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAA----GAE-QA--VDYSSKD----IELAIK--GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~----g~~-~v--~~~~~~~----~~~~i~--g~~  238 (364)
                      .|++++|+|+++++|.++++.+...|++|+.+.++.+. + ...++    +.. ..  .|..+.+    +.+.+.  |++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            47899999999999999999999999999998876543 2 22221    322 12  2333322    222222  559


Q ss_pred             cEEEECCCCch-------------------------hHHHHHhhcc--CCCEEEEEccC
Q 017901          239 DAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      |+++.+.|...                         ..+.+++.++  ..|++|.++..
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~  145 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV  145 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence            99999988521                         0244555554  34899988764

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.017  Score=50.48  Aligned_cols=74  Identities=24%  Similarity=0.398  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCChh-HHHHhc--CCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSKD-IELAIK--GKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~~-~~~~i~--g~~D~vid~~g~  247 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++.+.  +...+.+... ..|..+.+ +...+.  +++|++|.+.|.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~   87 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI   87 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            46799999999999999999999999999998886543  3334444432 23444432 222222  458999999985

>PRK06128 oxidoreductase; Provisional

Probab=96.55  E-value=0.035  Score=50.40  Aligned_cols=97  Identities=15%  Similarity=0.248  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-------HHHHHcCCce-e--eeCCChh----HHHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-------DRVLAAGAEQ-A--VDYSSKD----IELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-------~~~~~~g~~~-v--~~~~~~~----~~~~i~---g  236 (364)
                      .++++||+|++|++|..+++.+...|++|+.+.++.+.       +.+++.+... +  .|..+.+    +.+.+.   +
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999887554321       2233344322 1  2333322    222221   4


Q ss_pred             CccEEEECCCCc---h-----------------------hHHHHHhhccCCCEEEEEccC
Q 017901          237 KFDAVLDTIGAP---E-----------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~---~-----------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|++|.+.|..   .                       .++.+++.++++|++|.++..
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~  193 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI  193 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence            599999998842   0                       124455566778899988754

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.037  Score=49.38  Aligned_cols=71  Identities=27%  Similarity=0.320  Sum_probs=48.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce----eeeCCChhH----HHHhc---CCccE
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ----AVDYSSKDI----ELAIK---GKFDA  240 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~----v~~~~~~~~----~~~i~---g~~D~  240 (364)
                      +++|+||+|++|..+++.+...|++|+.+.++++.  +.   +...+...    ..|..+.+.    .+.+.   +++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999888776543  22   23334321    234444322    22221   45999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999985

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.53  E-value=0.034  Score=49.81  Aligned_cols=97  Identities=19%  Similarity=0.333  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCcee--eeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQA--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~~----~~~~i~---g~  237 (364)
                      .+++++|+||+  +++|.++++.+...|++|+.+.++++.     +...+++....  .|..+.+    +.+.+.   |+
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999986  799999999999999999988776431     22244443322  3444432    222222   56


Q ss_pred             ccEEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|++.|...                             ..+.++..++.+|+++.++..
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~  145 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL  145 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence            999999988410                             024566677778999988653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.52  E-value=0.031  Score=48.95  Aligned_cols=74  Identities=24%  Similarity=0.313  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC--Cc-ee--eeCCCh-hHHH---Hhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG--AE-QA--VDYSSK-DIEL---AIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g--~~-~v--~~~~~~-~~~~---~i~---g~~D  239 (364)
                      .+.+++|+||+|.+|..+++.+...|++|+++.++.+.  .....+.  .. ..  .|..+. ++..   .+.   +++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999999999999999999999999999887653  2223322  21 11  233332 2222   111   4489


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.51  E-value=0.029  Score=49.89  Aligned_cols=97  Identities=13%  Similarity=0.216  Sum_probs=72.3

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      +..||+....+..|....---.|++++|.|.+..+|.=+..++...+++|+.+.+.                  +.++.+
T Consensus       137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~------------------T~~l~~  198 (284)
T PRK14177        137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK------------------TQNLPS  198 (284)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence            34567666666656443333579999999999999999999999999999876432                  223333


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+  --+++++|..++.+|..
T Consensus       199 ~~~~-ADIvIsAvGk~~~i--~~~~ik~gavVIDvGin  233 (284)
T PRK14177        199 IVRQ-ADIIVGAVGKPEFI--KADWISEGAVLLDAGYN  233 (284)
T ss_pred             HHhh-CCEEEEeCCCcCcc--CHHHcCCCCEEEEecCc
Confidence            4444 99999999998443  37899999999999964

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.016  Score=50.93  Aligned_cols=74  Identities=19%  Similarity=0.202  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce--eeeCCChhHHHHhcCCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ--AVDYSSKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~--v~~~~~~~~~~~i~g~~D~vid~~g~  247 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++... ......+...  ..|..+.+-.....+++|++|++.|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            36799999999999999999999999999998876522 1111111111  23444433222222459999999985

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.028  Score=49.24  Aligned_cols=74  Identities=26%  Similarity=0.338  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChhH----HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKDI----ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~~----~~~i~---g~~  238 (364)
                      .+.+++|+|++|.+|..++..+...|++|+++.++++.  ..   ++..+.. .+  .|..+.+.    .+.+.   +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999998776553  22   2233322 12  24443321    12221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.49  E-value=0.03  Score=49.80  Aligned_cols=97  Identities=15%  Similarity=0.247  Sum_probs=71.8

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      +..||+....+..|....---.|++++|.|.+..+|.=++.++...+++|+.+.+.                  +.++.+
T Consensus       134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~------------------T~~l~~  195 (282)
T PRK14169        134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK------------------TRNLKQ  195 (282)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC------------------CCCHHH
Confidence            34577766666666433323478999999999999999999999999998866322                  223344


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+  --+++++|..++.+|..
T Consensus       196 ~~~~-ADIvI~AvG~p~~i--~~~~vk~GavVIDvGin  230 (282)
T PRK14169        196 LTKE-ADILVVAVGVPHFI--GADAVKPGAVVIDVGIS  230 (282)
T ss_pred             HHhh-CCEEEEccCCcCcc--CHHHcCCCcEEEEeecc
Confidence            4444 99999999998443  35789999999999965

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.48  E-value=0.028  Score=48.29  Aligned_cols=97  Identities=18%  Similarity=0.241  Sum_probs=65.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-H----HHHHcCCce--eeeCCChh-HHHHhcCC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-D----RVLAAGAEQ--AVDYSSKD-IELAIKGK  237 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~----~~~~~g~~~--v~~~~~~~-~~~~i~g~  237 (364)
                      ....++++++||-.|  ++.|..+..+++..+  .+|+++..+++. +    .+++.|.++  ++..+... +..  .++
T Consensus        70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~--~~~  145 (212)
T PRK13942         70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEE--NAP  145 (212)
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCc--CCC
Confidence            566789999999998  346888888888765  589999777653 3    344455432  22222111 111  134


Q ss_pred             ccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+|+-............+.|++||+++..-
T Consensus       146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~  176 (212)
T PRK13942        146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV  176 (212)
T ss_pred             cCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence            9998776555556778899999999988753

>PRK07985 oxidoreductase; Provisional

Probab=96.47  E-value=0.028  Score=50.92  Aligned_cols=97  Identities=19%  Similarity=0.247  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc---HHH----HHHcCCce---eeeCCChh-H---HHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDR----VLAAGAEQ---AVDYSSKD-I---ELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~---~~~----~~~~g~~~---v~~~~~~~-~---~~~i~---g  236 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.++.+   .+.    +.+.+...   ..|..+.+ +   .+.+.   |
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5678999999999999999999999999988765432   111    22333321   22333332 2   12221   5


Q ss_pred             CccEEEECCCCch--------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          237 KFDAVLDTIGAPE--------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|+++.+.|...                          .++.+++.++.+|++|.++..
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~  187 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI  187 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence            5899999887420                          123455556678999988754

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.022  Score=50.24  Aligned_cols=74  Identities=20%  Similarity=0.300  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCChh----HHHHhc---CCccEEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSKD----IELAIK---GKFDAVLD  243 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~~----~~~~i~---g~~D~vid  243 (364)
                      .|++++|+||+|.+|..+++.+...|++|+++.+++..  ....+++... ..|..+.+    +.+.+.   +++|++|.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999999999999999877653  2334444321 23444432    222221   45899999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9874

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.47  E-value=0.032  Score=49.64  Aligned_cols=97  Identities=15%  Similarity=0.196  Sum_probs=72.4

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      +..||+....+..|....---.|++++|.|.+..+|.=++.++...+++|+.+-+.                  +.++.+
T Consensus       136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~------------------T~dl~~  197 (282)
T PRK14180        136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF------------------TTDLKS  197 (282)
T ss_pred             CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC------------------CCCHHH
Confidence            34577776667666444333579999999999999999999999999999776332                  122333


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       198 ~~k~-ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin  232 (282)
T PRK14180        198 HTTK-ADILIVAVGKPNFIT--ADMVKEGAVVIDVGIN  232 (282)
T ss_pred             Hhhh-cCEEEEccCCcCcCC--HHHcCCCcEEEEeccc
Confidence            3334 999999999984443  4889999999999964

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.45  E-value=0.035  Score=49.45  Aligned_cols=96  Identities=17%  Similarity=0.197  Sum_probs=71.9

Q ss_pred             ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901          153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE  231 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (364)
                      +..||+....+..+ +..++ -.|++++|.|.+..+|.-++.++...|++|+.+.+.                  +.++.
T Consensus       142 ~~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~------------------T~~l~  202 (287)
T PRK14176        142 GLVPCTPHGVIRAL-EEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVF------------------TDDLK  202 (287)
T ss_pred             CCCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEecc------------------CCCHH
Confidence            34577766666666 44444 479999999988889999999999999999777432                  12333


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.++. +|+++.++|.+..+  --+++++|..++.+|..
T Consensus       203 ~~~~~-ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin  238 (287)
T PRK14176        203 KYTLD-ADILVVATGVKHLI--KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             HHHhh-CCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence            44444 99999999998544  35689999999999964

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.43  E-value=0.031  Score=49.79  Aligned_cols=95  Identities=15%  Similarity=0.233  Sum_probs=71.7

Q ss_pred             cccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ..||+....+..| +..++ -.|++++|.|.+..+|.=++.++...+++|+.+.+.                  +.++.+
T Consensus       134 ~~PcTp~avi~lL-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~------------------T~~l~~  194 (287)
T PRK14173        134 LEPCTPAGVVRLL-KHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK------------------TQDLPA  194 (287)
T ss_pred             CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence            4577766666666 44444 479999999999999999999999999998866332                  223344


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+  --+++++|..++.+|..
T Consensus       195 ~~~~-ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin  229 (287)
T PRK14173        195 VTRR-ADVLVVAVGRPHLI--TPEMVRPGAVVVDVGIN  229 (287)
T ss_pred             HHhh-CCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence            4444 99999999998444  46889999999999965

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.032  Score=49.68  Aligned_cols=96  Identities=18%  Similarity=0.248  Sum_probs=70.8

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ..||+.......|....---.|+++.+.|.++.+|.-++.++...|++|+..-+.                  +.++.+.
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~------------------t~~l~~~  198 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSR------------------TRNLAEV  198 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCC------------------CCCHHHH
Confidence            4567666666666433333579999999988999999999999999999876211                  1123344


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|+||-++|.+..+..  .++++|..+|.+|..
T Consensus       199 ~~~-ADIVI~avg~~~~v~~--~~ik~GavVIDvgin  232 (284)
T PRK14179        199 ARK-ADILVVAIGRGHFVTK--EFVKEGAVVIDVGMN  232 (284)
T ss_pred             Hhh-CCEEEEecCccccCCH--HHccCCcEEEEecce
Confidence            444 9999999999866554  359999999999865

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.016  Score=50.72  Aligned_cols=74  Identities=23%  Similarity=0.386  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      ++++++|+||+|.+|...++.+...|++|+.+.++++.  +...+++... .  .|..+.+    +.+.+.   +++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999877543  3344555432 2  2332221    222222   459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999874

>PRK06484 short chain dehydrogenase; Validated

Probab=96.42  E-value=0.03  Score=55.03  Aligned_cols=97  Identities=20%  Similarity=0.287  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCce---eeeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQ---AVDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      .|++++|+|+++++|...++.+...|++|+.+.++.+. + ...+++...   ..|..+.+    +.+.+.   |++|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57889999999999999999999999999999886553 2 334444332   23443332    222222   569999


Q ss_pred             EECCCCch---h-----------------------HHHHHhhccCCCEEEEEccC
Q 017901          242 LDTIGAPE---T-----------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~---~-----------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |.+.|...   .                       .+.++..++.+|++|.++..
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~  402 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI  402 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence            99988420   0                       24445566677999988754

>PRK09186 flagellin modification protein A; Provisional

Probab=96.42  E-value=0.048  Score=47.98  Aligned_cols=73  Identities=22%  Similarity=0.345  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCce----eeeCCChh-H---HHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAEQ----AVDYSSKD-I---ELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~~----v~~~~~~~-~---~~~i~---g  236 (364)
                      .+++++|+|++|.+|..++..+...|++|+.+.++.+.  +...++    +...    ..|..+.+ +   .+.+.   +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999876543  222222    2211    22444332 2   22221   4


Q ss_pred             CccEEEECCC
Q 017901          237 KFDAVLDTIG  246 (364)
Q Consensus       237 ~~D~vid~~g  246 (364)
                      ++|++|.+.|
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            5899999986

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.42  E-value=0.015  Score=51.69  Aligned_cols=97  Identities=16%  Similarity=0.290  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce-ee----eCCCh-hHH---HHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ-AV----DYSSK-DIE---LAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~-v~----~~~~~-~~~---~~i~---g  236 (364)
                      .|+.|+|+||++++|..++.-.-..|++++.+++..++     +.+++.+... ++    |.++. +..   +.+.   |
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999998888899998888766543     4456666554 22    33332 222   2222   5


Q ss_pred             CccEEEECCCCchh-------------------------HHHHHhhccCC--CEEEEEccC
Q 017901          237 KFDAVLDTIGAPET-------------------------ERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~~~-------------------------~~~~~~~l~~~--G~~v~~g~~  270 (364)
                      ++|+.+++.|-...                         ...++..|++.  |++|.++..
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSi  151 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSI  151 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecc
Confidence            69999998884311                         25666666644  999988754

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.40  E-value=0.039  Score=49.16  Aligned_cols=96  Identities=18%  Similarity=0.300  Sum_probs=72.2

Q ss_pred             ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901          153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE  231 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (364)
                      ...||+.......|. ..++ -.|++++|.|.+..+|.-++.++...+++|+.+.+                  .+.++.
T Consensus       136 ~~~PcTp~av~~lL~-~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs------------------~t~~l~  196 (284)
T PRK14190        136 TFLPCTPHGILELLK-EYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHS------------------KTKNLA  196 (284)
T ss_pred             CCCCCCHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeC------------------CchhHH
Confidence            345777666666664 3343 47999999999999999999999999999987632                  222344


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.++. +|+++-++|.+..  ---+++++|..++.+|..
T Consensus       197 ~~~~~-ADIvI~AvG~p~~--i~~~~ik~gavVIDvGi~  232 (284)
T PRK14190        197 ELTKQ-ADILIVAVGKPKL--ITADMVKEGAVVIDVGVN  232 (284)
T ss_pred             HHHHh-CCEEEEecCCCCc--CCHHHcCCCCEEEEeecc
Confidence            44444 9999999999843  336778999999999975

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=96.40  E-value=0.04  Score=49.39  Aligned_cols=97  Identities=15%  Similarity=0.253  Sum_probs=72.5

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      +..||+....+..|....---.|++++|.|.+..+|.=+..++...|++|+.+-+.                  +.++.+
T Consensus       145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~------------------T~nl~~  206 (299)
T PLN02516        145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR------------------TPDPES  206 (299)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence            45677776667666443323469999999999999999999999999999887432                  223344


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       207 ~~~~-ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin  241 (299)
T PLN02516        207 IVRE-ADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTN  241 (299)
T ss_pred             HHhh-CCEEEEcCCCcCccC--HHHcCCCCEEEEeecc
Confidence            4444 999999999974333  5789999999999965

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.028  Score=49.75  Aligned_cols=77  Identities=19%  Similarity=0.265  Sum_probs=51.5

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCc----eeeeCCChh-H---HHHhc---CCc
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAE----QAVDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~----~v~~~~~~~-~---~~~i~---g~~  238 (364)
                      .-++.+++|.|++|.+|..+++.+...|++|+.+.++.+. ..+ ....-.    ...|..+.+ +   .+.+.   +++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3567899999999999999999999999999999886553 222 222211    122333332 2   12221   349


Q ss_pred             cEEEECCCCc
Q 017901          239 DAVLDTIGAP  248 (364)
Q Consensus       239 D~vid~~g~~  248 (364)
                      |+||.+.|..
T Consensus        88 d~vi~~ag~~   97 (264)
T PRK12829         88 DVLVNNAGIA   97 (264)
T ss_pred             CEEEECCCCC
Confidence            9999998853

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.34  E-value=0.019  Score=50.98  Aligned_cols=74  Identities=27%  Similarity=0.291  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCc-ee--eeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QA--VDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .+++++|+|+++++|..+++.+...|++|+.+.++++. +. ..+++.. ..  .|..+.+ .   .+.+.   |++|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            46899999999999999999999999999999887654 32 3333321 12  2333322 2   22221   559999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        85 i~~ag~   90 (263)
T PRK06200         85 VGNAGI   90 (263)
T ss_pred             EECCCC
Confidence            999884

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.023  Score=50.64  Aligned_cols=73  Identities=19%  Similarity=0.358  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC-Cce-eeeCCChh-H---HHHhc---CCccEEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG-AEQ-AVDYSSKD-I---ELAIK---GKFDAVLD  243 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g-~~~-v~~~~~~~-~---~~~i~---g~~D~vid  243 (364)
                      +.+++|+||+|++|..+++.+...|++|+.+.++++.  +...+++ ... ..|..+.+ +   .+.+.   +++|++|.
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999999888899999988876654  2334444 221 23444432 2   22221   45999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        85 ~ag~   88 (273)
T PRK07825         85 NAGV   88 (273)
T ss_pred             CCCc
Confidence            9884

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.29  E-value=0.046  Score=45.63  Aligned_cols=115  Identities=13%  Similarity=0.141  Sum_probs=75.7

Q ss_pred             ccccchHHHHHHHHHHhccc----------CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee
Q 017901          153 SAIPFAALTAWRALKCAARM----------SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA  222 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~----------~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v  222 (364)
                      +.+||+....+..|. ..++          -.|++++|.|.+..+|.=++.++...||+|+.+..+.-..+.+.-.-.+-
T Consensus        31 ~~~PCTp~avi~lL~-~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs  109 (197)
T cd01079          31 SILPCTPLAIVKILE-FLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHE  109 (197)
T ss_pred             CccCCCHHHHHHHHH-HhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccc
Confidence            445777766666664 3333          57999999999999999999999999999997743322111000000000


Q ss_pred             ee--CC-ChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          223 VD--YS-SKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       223 ~~--~~-~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      -.  .+ ..++.+.++. +|+|+-++|.+ .+.---+++++|..+|.+|..
T Consensus       110 ~t~~~~~~~~l~~~~~~-ADIVIsAvG~~-~~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         110 KHHVTDEEAMTLDCLSQ-SDVVITGVPSP-NYKVPTELLKDGAICINFASI  158 (197)
T ss_pred             cccccchhhHHHHHhhh-CCEEEEccCCC-CCccCHHHcCCCcEEEEcCCC
Confidence            00  00 1124555555 99999999998 332347899999999999965

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.052  Score=48.00  Aligned_cols=72  Identities=18%  Similarity=0.314  Sum_probs=48.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcC-Cc-e--eeeCCChh-HH---HHh----cCCccEE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAG-AE-Q--AVDYSSKD-IE---LAI----KGKFDAV  241 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g-~~-~--v~~~~~~~-~~---~~i----~g~~D~v  241 (364)
                      ++++|+||+|.+|..+++.+...|++|+.+.++.+. + .....+ .. .  ..|..+.+ +.   ..+    .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            479999999999999999998899999999876654 3 233332 11 1  23433322 22   122    2458999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      +.|.|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999985

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.033  Score=49.31  Aligned_cols=75  Identities=21%  Similarity=0.328  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHH-cCCcee----eeCCChh-H---HHHhc--
Q 017901          173 SEGQRLLVLGGGG-AVGFAAVQFSVASGCHVSATCGSKSI-DR----VLA-AGAEQA----VDYSSKD-I---ELAIK--  235 (364)
Q Consensus       173 ~~g~~vli~g~~g-~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~-~g~~~v----~~~~~~~-~---~~~i~--  235 (364)
                      ..+++++|+|++| ++|.++++.+...|++|+.+.++++. +.    +++ .+...+    .|..+.+ +   .+.+.  
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999886 89999999999999999988776543 21    222 343222    2443332 2   22221  


Q ss_pred             -CCccEEEECCCC
Q 017901          236 -GKFDAVLDTIGA  247 (364)
Q Consensus       236 -g~~D~vid~~g~  247 (364)
                       |++|++|.+.|.
T Consensus        95 ~g~id~li~~ag~  107 (262)
T PRK07831         95 LGRLDVLVNNAGL  107 (262)
T ss_pred             cCCCCEEEECCCC
Confidence             558999999984

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.27  E-value=0.048  Score=48.53  Aligned_cols=97  Identities=21%  Similarity=0.282  Sum_probs=71.8

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...||+....+..|....---.|++++|.|.+..+|.=++.++...+++|+.+-+.                  +.++.+
T Consensus       135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~------------------T~nl~~  196 (282)
T PRK14166        135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK------------------TKDLSL  196 (282)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence            34577766666666443323479999999999999999999999999999866332                  122333


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       197 ~~~~-ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin  231 (282)
T PRK14166        197 YTRQ-ADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN  231 (282)
T ss_pred             HHhh-CCEEEEcCCCcCccC--HHHcCCCCEEEEeccc
Confidence            4444 999999999984433  5689999999999965

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.27  E-value=0.043  Score=48.80  Aligned_cols=96  Identities=19%  Similarity=0.304  Sum_probs=71.4

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ..||+.......|....---.|++++|.|.+..+|.=+..++...+++|+.+.+                  .+.++.+.
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs------------------~T~~l~~~  197 (284)
T PRK14170        136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHS------------------RTKDLPQV  197 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC------------------CCCCHHHH
Confidence            457776666666643332346999999999999999999999999999886632                  22234444


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|+++-++|.+..  ---+++++|..++.+|..
T Consensus       198 ~~~-ADIvI~AvG~~~~--i~~~~vk~GavVIDvGin  231 (284)
T PRK14170        198 AKE-ADILVVATGLAKF--VKKDYIKPGAIVIDVGMD  231 (284)
T ss_pred             Hhh-CCEEEEecCCcCc--cCHHHcCCCCEEEEccCc
Confidence            444 9999999999844  335789999999999965

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.27  E-value=0.047  Score=48.44  Aligned_cols=95  Identities=19%  Similarity=0.326  Sum_probs=71.2

Q ss_pred             cccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ..||+....+..|.. -++ -.|++++|.|.+..+|.=+..++...|++|+.+.+.                  +.++.+
T Consensus       137 ~~PcTp~av~~lL~~-~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~------------------T~~l~~  197 (278)
T PRK14172        137 FLPCTPNSVITLIKS-LNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK------------------TKNLKE  197 (278)
T ss_pred             CcCCCHHHHHHHHHH-hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence            457766666666643 343 479999999999999999999999999998776432                  223334


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+  --+++++|..+|.+|..
T Consensus       198 ~~~~-ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin  232 (278)
T PRK14172        198 VCKK-ADILVVAIGRPKFI--DEEYVKEGAIVIDVGTS  232 (278)
T ss_pred             HHhh-CCEEEEcCCCcCcc--CHHHcCCCcEEEEeecc
Confidence            4444 99999999998443  35779999999999865

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.27  E-value=0.05  Score=48.78  Aligned_cols=95  Identities=17%  Similarity=0.266  Sum_probs=70.6

Q ss_pred             cccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ..||+....+..|. .-++ -.|++++|.|.+..+|.=+..++...|++|+.+.+.                  +.++.+
T Consensus       137 ~~PcTp~aii~lL~-~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~------------------T~~l~~  197 (297)
T PRK14186        137 LRSCTPAGVMRLLR-SQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSR------------------TQDLAS  197 (297)
T ss_pred             CCCCCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence            44666666666563 3343 478999999999999999999999999999777332                  223333


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+  --+++++|..+|.+|..
T Consensus       198 ~~~~-ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin  232 (297)
T PRK14186        198 ITRE-ADILVAAAGRPNLI--GAEMVKPGAVVVDVGIH  232 (297)
T ss_pred             HHhh-CCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence            4444 99999999998443  36789999999999965

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.26  E-value=0.089  Score=40.42  Aligned_cols=99  Identities=16%  Similarity=0.084  Sum_probs=63.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HH----HHHcCCce--eeeCCChhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DR----VLAAGAEQ--AVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~----~~~~g~~~--v~~~~~~~~~~~i~g~~D  239 (364)
                      ....+.++++++-.| +|. |..+..+++..+ .+|+++..++.. +.    +...+...  ++..+.........+++|
T Consensus        13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   90 (124)
T TIGR02469        13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD   90 (124)
T ss_pred             HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence            445667788999998 554 999999998864 689999776553 33    34444432  222221111111123499


Q ss_pred             EEEECCCCc---hhHHHHHhhccCCCEEEEEc
Q 017901          240 AVLDTIGAP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       240 ~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+...+..   ..++.+.+.|+++|+++...
T Consensus        91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             EEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            999765432   36789999999999998754

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.26  E-value=0.029  Score=48.79  Aligned_cols=87  Identities=30%  Similarity=0.457  Sum_probs=62.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCcee-eeCCC-hhHHHHhcCCccEEEECCCC---c-
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQA-VDYSS-KDIELAIKGKFDAVLDTIGA---P-  248 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~v-~~~~~-~~~~~~i~g~~D~vid~~g~---~-  248 (364)
                      |+|.||+|.+|...++.+...+.+|.+++|+...   ..++..|+..+ .|+.+ +++.+.++| +|.||.+++.   . 
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g-~d~v~~~~~~~~~~~   79 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKG-VDAVFSVTPPSHPSE   79 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTT-CSEEEEESSCSCCCH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcC-CceEEeecCcchhhh
Confidence            6899999999999999999999999999998753   45677888644 24433 356666778 9999999993   2 


Q ss_pred             -hhHHHHHhhccCCC--EEE
Q 017901          249 -ETERLGLNFLKRGG--HYM  265 (364)
Q Consensus       249 -~~~~~~~~~l~~~G--~~v  265 (364)
                       ......+++.+.-|  ++|
T Consensus        80 ~~~~~~li~Aa~~agVk~~v   99 (233)
T PF05368_consen   80 LEQQKNLIDAAKAAGVKHFV   99 (233)
T ss_dssp             HHHHHHHHHHHHHHT-SEEE
T ss_pred             hhhhhhHHHhhhccccceEE
Confidence             12345555555544  555

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.031  Score=49.20  Aligned_cols=74  Identities=22%  Similarity=0.377  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce----eeeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ----AVDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~----v~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .+++++|+||+|.+|..+++.+...|++|+.+.++.+. ....++....    ..|..+.+ +   .+.+.   +++|++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   93 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL   93 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999887654 3333322111    22333321 2   22221   358999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        94 i~~ag~   99 (255)
T PRK06841         94 VNSAGV   99 (255)
T ss_pred             EECCCC
Confidence            999985

>PRK06196 oxidoreductase; Provisional

Probab=96.24  E-value=0.026  Score=51.67  Aligned_cols=74  Identities=16%  Similarity=0.349  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC-Cc-eeeeCCChh----HHHHhc---CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG-AE-QAVDYSSKD----IELAIK---GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g-~~-~v~~~~~~~----~~~~i~---g~~D~vi  242 (364)
                      .+.+++|+||+|++|..+++.+...|++|+.+.++.+.  +.+.++. .. ...|..+.+    +.+.+.   +++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            46899999999999999999999999999999887653  2223322 21 122333332    222222   4599999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            99884

>PRK08589 short chain dehydrogenase; Validated

Probab=96.23  E-value=0.024  Score=50.58  Aligned_cols=74  Identities=23%  Similarity=0.376  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH---HHcCCc-e--eeeCCChh----HHHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV---LAAGAE-Q--AVDYSSKD----IELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~---~~~g~~-~--v~~~~~~~----~~~~i~---g~~D  239 (364)
                      .++++||+|+++++|..+++.+...|++|+.+.++++. +.+   .+.+.. .  ..|..+.+    +.+.+.   |++|
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD   84 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence            47899999999999999999999999999999887443 222   222322 1  23433332    222222   5599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        85 ~li~~Ag~   92 (272)
T PRK08589         85 VLFNNAGV   92 (272)
T ss_pred             EEEECCCC
Confidence            99999874

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.22  E-value=0.022  Score=43.11  Aligned_cols=92  Identities=21%  Similarity=0.252  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HcCCeEEEeeCCccH-HHHHH----cCCceeeeCCChhH--HHHhcCCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKSI-DRVLA----AGAEQAVDYSSKDI--ELAIKGKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~-~~g~~vi~~~~~~~~-~~~~~----~g~~~v~~~~~~~~--~~~i~g~~D~vid~~  245 (364)
                      |+.+||-.| +| .|..+..+++ ..+++|+++..+++. +.+++    .+...-+.....++  .....+++|+|+...
T Consensus         1 p~~~vLDlG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~   78 (112)
T PF12847_consen    1 PGGRVLDLG-CG-TGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG   78 (112)
T ss_dssp             TTCEEEEET-TT-TSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred             CCCEEEEEc-Cc-CCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence            678999998 33 5888888888 578899999777653 43322    23222111111222  111113499999877


Q ss_pred             -CCc---------hhHHHHHhhccCCCEEEEE
Q 017901          246 -GAP---------ETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       246 -g~~---------~~~~~~~~~l~~~G~~v~~  267 (364)
                       ...         ..+..+.+.|+|||+++.-
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence             221         1278899999999999853

...

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.22  E-value=0.068  Score=47.86  Aligned_cols=146  Identities=18%  Similarity=0.174  Sum_probs=85.8

Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHH--HHHHHhcccCCCCEEEEEcCCch
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW--RALKCAARMSEGQRLLVLGGGGA  186 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~--~~l~~~~~~~~g~~vli~g~~g~  186 (364)
                      -++.|++.+..++       |.+|..-....++++.+++-+-    ......|++  .+|.  ..+++|++++=.| + +
T Consensus       108 P~rig~~f~I~Ps-------w~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le--~~~~~g~~vlDvG-c-G  172 (300)
T COG2264         108 PVRIGERFVIVPS-------WREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALE--KLLKKGKTVLDVG-C-G  172 (300)
T ss_pred             cEEeeeeEEECCC-------CccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHH--HhhcCCCEEEEec-C-C
Confidence            3667887776654       5554322234566676665332    222233333  2332  2356999999998 3 3


Q ss_pred             HHHHHHHHHHHcCC-eEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCc---hhHHHHHh
Q 017901          187 VGFAAVQFSVASGC-HVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAP---ETERLGLN  256 (364)
Q Consensus       187 ~G~~~~~~a~~~g~-~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~---~~~~~~~~  256 (364)
                      .|.+++..++. |+ +|+++..++-.     +.++..+.+............... +++|+|+.++=..   ...+...+
T Consensus       173 SGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~  251 (300)
T COG2264         173 SGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKR  251 (300)
T ss_pred             hhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHH
Confidence            68888877775 66 69998665532     345555554211111111111222 4699999876443   24578888


Q ss_pred             hccCCCEEEEEccC
Q 017901          257 FLKRGGHYMTLHGE  270 (364)
Q Consensus       257 ~l~~~G~~v~~g~~  270 (364)
                      .++|+|++++-|..
T Consensus       252 ~lkpgg~lIlSGIl  265 (300)
T COG2264         252 LLKPGGRLILSGIL  265 (300)
T ss_pred             HcCCCceEEEEeeh
Confidence            99999999999975

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.20  E-value=0.025  Score=49.89  Aligned_cols=74  Identities=16%  Similarity=0.240  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCce---eeeCCChh-H---HHHhc---CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQ---AVDYSSKD-I---ELAIK---GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D~  240 (364)
                      .+++++|+|+++++|.++++.+...|++|+.+.+++..   +.+.+.+...   ..|..+.+ .   .+.+.   |++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999988664322   2344444331   22443332 2   22221   56999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      ++.+.|.
T Consensus        87 lv~~ag~   93 (251)
T PRK12481         87 LINNAGI   93 (251)
T ss_pred             EEECCCc
Confidence            9999884

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.20  E-value=0.0084  Score=57.83  Aligned_cols=92  Identities=21%  Similarity=0.152  Sum_probs=61.3

Q ss_pred             hcccCCCCEEE----EEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc-eeeeCCChhHHHHhcCCccEEE
Q 017901          169 AARMSEGQRLL----VLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       169 ~~~~~~g~~vl----i~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~~~~i~g~~D~vi  242 (364)
                      ..++++|+.++    ++||.|++|.+++|+++..|++|+++.+.... ...+..+.+ .++|.+.....+.+.. .    
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~-~----  102 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKA-L----  102 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHH-H----
Confidence            45678888888    88889999999999999999999998655442 222223333 2444433222222221 0    


Q ss_pred             ECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          243 DTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                           ...+...++.|.++|+++.++..
T Consensus       103 -----~~~~~~~l~~l~~~griv~i~s~  125 (450)
T PRK08261        103 -----YEFFHPVLRSLAPCGRVVVLGRP  125 (450)
T ss_pred             -----HHHHHHHHHhccCCCEEEEEccc
Confidence                 02456778888999999998865

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.20  E-value=0.032  Score=49.41  Aligned_cols=74  Identities=30%  Similarity=0.339  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-cCCc-ee--eeCCCh-hH---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAE-QA--VDYSSK-DI---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-~g~~-~v--~~~~~~-~~---~~~i~---g~~D~v  241 (364)
                      .+++++|+||+|++|..+++.+...|++|+.+.++.+. +.+.+ .+.. ..  .|..+. +.   .+.+.   +++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46899999999999999999999999999998876553 33322 2321 11  233332 12   22221   458999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        84 i~~Ag~   89 (262)
T TIGR03325        84 IPNAGI   89 (262)
T ss_pred             EECCCC
Confidence            999873

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.029  Score=48.70  Aligned_cols=74  Identities=22%  Similarity=0.358  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH---HcCCce-eeeCCCh-hH---HHHhc---CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AAGAEQ-AVDYSSK-DI---ELAIK---GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~---~~g~~~-v~~~~~~-~~---~~~i~---g~~D~  240 (364)
                      ++++++|+|++|.+|..+++.+...|++|+++.++...  +.+.   ..+... ..|..+. ++   .+.+.   +++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            47899999999999999999998889999999886543  2222   223321 1233332 22   22221   45999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9999874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.17  E-value=0.029  Score=49.47  Aligned_cols=97  Identities=21%  Similarity=0.304  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce--e--eeCCCh----hHHHHhc---CCcc
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ--A--VDYSSK----DIELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~--v--~~~~~~----~~~~~i~---g~~D  239 (364)
                      .|++++|+||+  +++|.++++.+...|++|+.+.++++. +.+.++....  .  .|..+.    .+.+.+.   |++|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            57899999988  799999999999999999998776543 3333332211  1  233332    2222332   5699


Q ss_pred             EEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +++.+.|...                             ..+.++..++.+|+++.++..
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~  145 (252)
T PRK06079         86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYF  145 (252)
T ss_pred             EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEecc
Confidence            9999987420                             023445667778998887754

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.022  Score=50.71  Aligned_cols=73  Identities=21%  Similarity=0.366  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCCh-hHHHHhc------CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIK------GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~i~------g~~D~vid~~  245 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++...... ..+... ..|..+. ++...+.      |++|++|.+.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a   81 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA   81 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence            35689999999999999999998999999999886543111 112221 2344333 2222221      4589999999


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        82 g~   83 (270)
T PRK06179         82 GV   83 (270)
T ss_pred             CC
Confidence            85

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.055  Score=48.37  Aligned_cols=97  Identities=18%  Similarity=0.311  Sum_probs=72.0

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      +..||+....+..|....---.|++++|.|.+..+|.=+..++...+++|+.+.+.                  +.++.+
T Consensus       138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~------------------T~~l~~  199 (294)
T PRK14187        138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSA------------------TRDLAD  199 (294)
T ss_pred             CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCC------------------CCCHHH
Confidence            34567666666666443333579999999999999999999999999999876432                  122333


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+  --+++++|..+|.+|..
T Consensus       200 ~~~~-ADIvVsAvGkp~~i--~~~~ik~gaiVIDVGin  234 (294)
T PRK14187        200 YCSK-ADILVAAVGIPNFV--KYSWIKKGAIVIDVGIN  234 (294)
T ss_pred             HHhh-CCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence            4444 99999999998443  36789999999999965

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.029  Score=49.61  Aligned_cols=74  Identities=22%  Similarity=0.318  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc-----CCc-e--eeeCCCh-hH---HHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA-----GAE-Q--AVDYSSK-DI---ELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~-----g~~-~--v~~~~~~-~~---~~~i~---g  236 (364)
                      .+++++|+|+++++|..+++.+...|++|+.+.++++.  +...++     +.. .  ..|..+. ++   .+.+.   |
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46889999999999999999999999999998876553  222222     221 1  1233333 22   22221   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus        86 ~id~li~~ag~   96 (260)
T PRK07063         86 PLDVLVNNAGI   96 (260)
T ss_pred             CCcEEEECCCc
Confidence            59999999884

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.15  E-value=0.012  Score=44.14  Aligned_cols=88  Identities=20%  Similarity=0.359  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL  253 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~  253 (364)
                      .|.+|+|.| +|.+|..-++.+...|++|+.+....  ....  +-   +......+.+.+.+ +|+||.+++.+..-..
T Consensus         6 ~~~~vlVvG-gG~va~~k~~~Ll~~gA~v~vis~~~--~~~~--~~---i~~~~~~~~~~l~~-~~lV~~at~d~~~n~~   76 (103)
T PF13241_consen    6 KGKRVLVVG-GGPVAARKARLLLEAGAKVTVISPEI--EFSE--GL---IQLIRREFEEDLDG-ADLVFAATDDPELNEA   76 (103)
T ss_dssp             TT-EEEEEE-ESHHHHHHHHHHCCCTBEEEEEESSE--HHHH--TS---CEEEESS-GGGCTT-ESEEEE-SS-HHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCch--hhhh--hH---HHHHhhhHHHHHhh-heEEEecCCCHHHHHH
Confidence            578899999 79999999999999999999997775  1111  11   11112233334446 9999999999855556


Q ss_pred             HHhhccCCCEEEEEccC
Q 017901          254 GLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       254 ~~~~l~~~G~~v~~g~~  270 (364)
                      .....+..|.++.....
T Consensus        77 i~~~a~~~~i~vn~~D~   93 (103)
T PF13241_consen   77 IYADARARGILVNVVDD   93 (103)
T ss_dssp             HHHHHHHTTSEEEETT-
T ss_pred             HHHHHhhCCEEEEECCC
Confidence            66666668888887653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.14  E-value=0.067  Score=47.35  Aligned_cols=97  Identities=21%  Similarity=0.297  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCcc----H-HHHHHc-CCc-e--eeeCCChh----HHHHhc---
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS----I-DRVLAA-GAE-Q--AVDYSSKD----IELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~----~-~~~~~~-g~~-~--v~~~~~~~----~~~~i~---  235 (364)
                      .|++++|+||+  +++|.++++.+...|++|+.+.++++    . +...++ +.. .  ..|..+.+    +.+.+.   
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            47899999986  79999999999999999998865432    1 222333 211 1  23433332    222222   


Q ss_pred             CCccEEEECCCCch------h-----------------------HHHHHhhccCCCEEEEEccC
Q 017901          236 GKFDAVLDTIGAPE------T-----------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       236 g~~D~vid~~g~~~------~-----------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |++|+++.|.|...      .                       .+.+++.++++|++|.++..
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~  149 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYL  149 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEccc
Confidence            66999999887310      0                       13445566778999988754

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.031  Score=49.56  Aligned_cols=74  Identities=24%  Similarity=0.357  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HH---HHcCCc-ee--eeCCChhHH----HHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RV---LAAGAE-QA--VDYSSKDIE----LAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~---~~~g~~-~v--~~~~~~~~~----~~i~---g~~  238 (364)
                      ++.+++|+|++|.+|..+++.+...|++|+.+.++.+. + ..   ...+.. .+  .|.++.+..    +.+.   +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999886543 2 22   222322 12  344443222    2221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        89 d~vi~~Ag~   97 (263)
T PRK07814         89 DIVVNNVGG   97 (263)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.12  E-value=0.041  Score=47.85  Aligned_cols=73  Identities=22%  Similarity=0.323  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCCh-h---HHHHhc---CCccEEEEC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSK-D---IELAIK---GKFDAVLDT  244 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~-~---~~~~i~---g~~D~vid~  244 (364)
                      +++++|+|+++++|..+++.+...|++|+.+.++...  +.++..++.. ..|..+. +   +.+.+.   +++|+++.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            4689999999999999999999999999999876543  3444555421 1233332 1   222222   459999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        82 ag~   84 (236)
T PRK06483         82 ASD   84 (236)
T ss_pred             Ccc
Confidence            874

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.11  E-value=0.071  Score=47.38  Aligned_cols=96  Identities=14%  Similarity=0.209  Sum_probs=71.0

Q ss_pred             ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901          153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE  231 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (364)
                      ...||+....+..|.. .++ -.|.+++|.|.+..+|.-+..++...|++|+...+..                  .++.
T Consensus       130 ~~~PcTp~av~~ll~~-~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t------------------~~L~  190 (279)
T PRK14178        130 GFAPCTPNGIMTLLHE-YKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT------------------ENLK  190 (279)
T ss_pred             CCCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh------------------hHHH
Confidence            3457766666666643 343 4789999999888999999999999999988875432                  2344


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.++. +|++|.++|.+..+.  -+++++|..++.+|..
T Consensus       191 ~~~~~-ADIvI~Avgk~~lv~--~~~vk~GavVIDVgi~  226 (279)
T PRK14178        191 AELRQ-ADILVSAAGKAGFIT--PDMVKPGATVIDVGIN  226 (279)
T ss_pred             HHHhh-CCEEEECCCcccccC--HHHcCCCcEEEEeecc
Confidence            45555 999999999764443  3458999999999965

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.039  Score=49.39  Aligned_cols=74  Identities=23%  Similarity=0.298  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHc-CCc-e--eeeCCChh-HHHHhc------CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAA-GAE-Q--AVDYSSKD-IELAIK------GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~-g~~-~--v~~~~~~~-~~~~i~------g~~D~v  241 (364)
                      .+++++|+|++|.+|..+++.+...|++|+++.++.+. +.+.+. +.. .  ..|..+.+ +...+.      +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            35789999999999999999999999999999887654 333332 211 1  22443332 222111      458999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999886

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.029  Score=49.89  Aligned_cols=74  Identities=22%  Similarity=0.387  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-HH---HHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-IE---LAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~~---~~i~---g~~  238 (364)
                      ++++++|+|++|.+|..+++.+...|++|+.+.++.+.  ..   +.+.+...   .+|..+.+ +.   +.+.   +++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999876543  21   22233221   23443332 22   2221   448


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        88 D~vi~~ag~   96 (264)
T PRK07576         88 DVLVSGAAG   96 (264)
T ss_pred             CEEEECCCC
Confidence            999998863

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.028  Score=50.87  Aligned_cols=74  Identities=27%  Similarity=0.474  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc-ee--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+||+|++|...++.+...|++|+++.++.+. +.    +.+.+.. ..  .|..+.+ +   .+.+.   |++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999998899999999887643 22    2223322 12  2333332 2   22221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.|.|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.035  Score=48.93  Aligned_cols=75  Identities=24%  Similarity=0.359  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCc-eee--eCCCh-hHHHHhc------CC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE-QAV--DYSSK-DIELAIK------GK  237 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~-~v~--~~~~~-~~~~~i~------g~  237 (364)
                      -.+++++|+|++|.+|..+++.+...|++|+++.++.+. +.+    +..+.. +++  |..+. ++...+.      ++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            357899999999999999999999999999999887553 222    222221 222  33332 2222211      45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            8999999984

>PRK05717 oxidoreductase; Validated

Probab=96.08  E-value=0.044  Score=48.30  Aligned_cols=74  Identities=20%  Similarity=0.323  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-e--eeeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-Q--AVDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~--v~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .|++++|+|++|.+|..++..+...|++|+.+.++...  +...+++.. .  ..|..+.+ +   .+.+.   |++|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46889999999999999999999999999998765443  333444422 1  22333322 2   22222   558999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        89 i~~ag~   94 (255)
T PRK05717         89 VCNAAI   94 (255)
T ss_pred             EECCCc
Confidence            999884

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.069  Score=47.29  Aligned_cols=74  Identities=16%  Similarity=0.299  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHc--CCc-ee--eeCCChh----HHHHhc--CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAA--GAE-QA--VDYSSKD----IELAIK--GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~--g~~-~v--~~~~~~~----~~~~i~--g~~D~  240 (364)
                      ++.+++|+||+|.+|..+++.+...|++|+++.++++. + ...++  +.. ..  .|..+.+    +.+.+.  +++|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            46789999999999999999999999999999887653 2 22222  111 12  2333321    112221  45899


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999885

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.07  E-value=0.054  Score=43.76  Aligned_cols=94  Identities=18%  Similarity=0.189  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      ..+.+++|.| .|.+|...++.+...| .+|+.+.++.+.  +.+.+++... +.....+..+.+.+ +|+|+.|++...
T Consensus        17 ~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~Dvvi~~~~~~~   93 (155)
T cd01065          17 LKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEELLAE-ADLIINTTPVGM   93 (155)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhcccc-CCEEEeCcCCCC
Confidence            4578899999 6999999999988886 577777766543  3455555421 00111122223445 999999998863


Q ss_pred             h----HHHHHhhccCCCEEEEEcc
Q 017901          250 T----ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~----~~~~~~~l~~~G~~v~~g~  269 (364)
                      .    .......++++..++.++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          94 KPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             CCCCCCCCCHHHcCCCCEEEEcCc
Confidence            2    1222345677777777754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.06  E-value=0.043  Score=48.64  Aligned_cols=74  Identities=20%  Similarity=0.326  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc--eeeeCCCh-h---HHHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE--QAVDYSSK-D---IELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~--~v~~~~~~-~---~~~~i~---g~~D  239 (364)
                      .|+.|||+||++++|.+.++-...+|++++....+.+-     +..++.|-.  .+.|.++. +   .++.++   |.+|
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~  116 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD  116 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence            58999999999999999888888889987777554431     445665522  23444443 2   333343   6699


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      +++++.|-
T Consensus       117 ILVNNAGI  124 (300)
T KOG1201|consen  117 ILVNNAGI  124 (300)
T ss_pred             EEEecccc
Confidence            99999884

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.06  E-value=0.093  Score=46.12  Aligned_cols=74  Identities=20%  Similarity=0.303  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-e--eeeCCChh-HH---HHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-Q--AVDYSSKD-IE---LAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~--v~~~~~~~-~~---~~i~---g~~  238 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++...  ..   +...+.. +  ..|..+.+ +.   +.+.   +++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999886553  22   2222322 1  22333332 21   2221   349


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.034  Score=49.29  Aligned_cols=74  Identities=23%  Similarity=0.424  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHc--CCc---eeeeCCChh----HHHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAA--GAE---QAVDYSSKD----IELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~--g~~---~v~~~~~~~----~~~~i~---g  236 (364)
                      .+++++|+||++++|...++.+...|++|+.+.++.+. + .   +.+.  +..   ...|..+.+    +.+.+.   |
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999886543 2 1   2222  111   122443332    222222   5


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            59999999984

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.06  E-value=0.046  Score=47.93  Aligned_cols=74  Identities=18%  Similarity=0.366  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce---eeeCCCh-hH---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ---AVDYSSK-DI---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~---v~~~~~~-~~---~~~i~---g~~  238 (364)
                      ++++++|+|++|.+|..+++.+...|++|+.+.++...  .   .++..+...   ..|..+. +.   .+.+.   +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999988876543  2   223334331   2233332 21   22221   448


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (253)
T PRK08217         84 NGLINNAGI   92 (253)
T ss_pred             CEEEECCCc
Confidence            999999883

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.06  E-value=0.072  Score=47.50  Aligned_cols=96  Identities=17%  Similarity=0.277  Sum_probs=70.3

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ..||+....+..|....---.|++++|.|.+..+|.=+..++...+++|+.+-+.                  +.++.+.
T Consensus       138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~------------------T~~L~~~  199 (288)
T PRK14171        138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSK------------------THNLSSI  199 (288)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHH
Confidence            4566666666656433223478999999999999999999999999998865321                  2233444


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       200 ~~~-ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin  233 (288)
T PRK14171        200 TSK-ADIVVAAIGSPLKLT--AEYFNPESIVIDVGIN  233 (288)
T ss_pred             Hhh-CCEEEEccCCCCccC--HHHcCCCCEEEEeecc
Confidence            444 999999999874333  5789999999999965

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.04  E-value=0.078  Score=47.14  Aligned_cols=96  Identities=20%  Similarity=0.247  Sum_probs=70.8

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ..||+.......|....---.|++++|.|.+..+|.=+..++...+++|+.+.+.                  +.++.+.
T Consensus       136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~------------------T~nl~~~  197 (282)
T PRK14182        136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSR------------------TADLAGE  197 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHH
Confidence            4577666666666433223479999999999999999999999999988876322                  2233444


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|+++-++|.+..+  --+++++|..++.+|..
T Consensus       198 ~~~-ADIvI~AvGk~~~i--~~~~ik~gaiVIDvGin  231 (282)
T PRK14182        198 VGR-ADILVAAIGKAELV--KGAWVKEGAVVIDVGMN  231 (282)
T ss_pred             Hhh-CCEEEEecCCcCcc--CHHHcCCCCEEEEeece
Confidence            444 99999999987443  35789999999999965

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.068  Score=47.74  Aligned_cols=73  Identities=18%  Similarity=0.272  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCc-ee--eeCCCh-hH---HHHhc---CCccEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAE-QA--VDYSSK-DI---ELAIK---GKFDAVL  242 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~-~v--~~~~~~-~~---~~~i~---g~~D~vi  242 (364)
                      +.+++|+|++|.+|..+++.+...|++|+.+.++.+. +.+ ..++.. ..  .|..+. ++   .+.+.   +++|++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999998889999999887654 322 222221 12  233332 22   12221   4589999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .|.|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99885

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.01  E-value=0.049  Score=46.34  Aligned_cols=89  Identities=13%  Similarity=0.159  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHH--HHHHcCCceeeeCCChhH-HHHhcCCccEEEECCCCchh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID--RVLAAGAEQAVDYSSKDI-ELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~--~~~~~g~~~v~~~~~~~~-~~~i~g~~D~vid~~g~~~~  250 (364)
                      .|.+|+|.| +|.+|...++.+...|++|+.+...-..+  .+.+.+.- .+..  ..+ ...+.+ +|+||-|++.+ .
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i-~~~~--~~~~~~~l~~-adlViaaT~d~-e   82 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKI-RWKQ--KEFEPSDIVD-AFLVIAATNDP-R   82 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCE-EEEe--cCCChhhcCC-ceEEEEcCCCH-H
Confidence            568999999 79999999998888999988885432222  22222211 1111  111 122335 99999999998 5


Q ss_pred             HHHHHhhccCCCEEEEEc
Q 017901          251 ERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g  268 (364)
                      ++..+...+..+.++...
T Consensus        83 lN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         83 VNEQVKEDLPENALFNVI  100 (202)
T ss_pred             HHHHHHHHHHhCCcEEEC
Confidence            555554444445565554

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.01  E-value=0.073  Score=47.60  Aligned_cols=97  Identities=20%  Similarity=0.307  Sum_probs=70.7

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCCh
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSK  228 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~  228 (364)
                      +..||+....+..|....---.|++++|.|.+..+|.=+..++...    +++|+.+-+.                  +.
T Consensus       135 ~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~------------------T~  196 (293)
T PRK14185        135 CFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSR------------------SK  196 (293)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCC------------------CC
Confidence            3457776666666643322347999999999999999999999887    5777765322                  22


Q ss_pred             hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++.+.++. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       197 nl~~~~~~-ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin  235 (293)
T PRK14185        197 NLKKECLE-ADIIIAALGQPEFVK--ADMVKEGAVVIDVGTT  235 (293)
T ss_pred             CHHHHHhh-CCEEEEccCCcCccC--HHHcCCCCEEEEecCc
Confidence            34444444 999999999985543  5899999999999965

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.00  E-value=0.044  Score=48.97  Aligned_cols=74  Identities=22%  Similarity=0.371  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCcee--eeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQA--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~~----~~~~i~---g~  237 (364)
                      .++++||+|+++  ++|.++++.+...|++|+.+.++++.     +...+.|....  .|..+.+    +.+.+.   |+
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            468899999876  99999999999999999988765432     22234453322  2433332    222222   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|+++++.|.
T Consensus        86 iD~lVnnAG~   95 (271)
T PRK06505         86 LDFVVHAIGF   95 (271)
T ss_pred             CCEEEECCcc
Confidence            9999999884

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.98  E-value=0.041  Score=48.18  Aligned_cols=74  Identities=23%  Similarity=0.306  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCc-ee--eeCCCh-hHH---HHhc---CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAE-QA--VDYSSK-DIE---LAIK---GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~-~v--~~~~~~-~~~---~~i~---g~~D~  240 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++...   +.+.+.+.. ..  .|..+. ++.   +.+.   +++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999876422   333444432 12  233333 222   2221   45999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        84 li~~ag~   90 (248)
T TIGR01832        84 LVNNAGI   90 (248)
T ss_pred             EEECCCC
Confidence            9999875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.033  Score=50.93  Aligned_cols=74  Identities=20%  Similarity=0.338  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH---Hc--CCc-ee--eeCCCh----hHHHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AA--GAE-QA--VDYSSK----DIELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~---~~--g~~-~v--~~~~~~----~~~~~i~---g  236 (364)
                      .|++++|+||++++|..+++.+...|++|+.++++.+.  +.+.   +.  +.. ..  +|..+.    .+.+.+.   +
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999887653  2222   21  111 11  233332    2233332   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            59999998874

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.98  E-value=0.077  Score=47.16  Aligned_cols=96  Identities=19%  Similarity=0.286  Sum_probs=69.7

Q ss_pred             ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901          153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE  231 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (364)
                      ...||+....+..|. ..++ -.|++++|.|.+..+|.=.+.++...|++|+.+ .+..                 .++.
T Consensus       135 ~~~PcTp~avi~lL~-~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~-hs~T-----------------~~l~  195 (281)
T PRK14183        135 GFVPCTPLGVMELLE-EYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDIC-HIFT-----------------KDLK  195 (281)
T ss_pred             CCCCCcHHHHHHHHH-HcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEe-CCCC-----------------cCHH
Confidence            345666666666553 3343 479999999988899999999999999999754 2211                 1223


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.++. +|+++-++|.+..+  --+++++|..++.+|..
T Consensus       196 ~~~~~-ADIvV~AvGkp~~i--~~~~vk~gavvIDvGin  231 (281)
T PRK14183        196 AHTKK-ADIVIVGVGKPNLI--TEDMVKEGAIVIDIGIN  231 (281)
T ss_pred             HHHhh-CCEEEEecCccccc--CHHHcCCCcEEEEeecc
Confidence            33444 99999999998443  36789999999999964

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.039  Score=48.58  Aligned_cols=74  Identities=19%  Similarity=0.297  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HH---HHcCCce---eeeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RV---LAAGAEQ---AVDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~---~~~g~~~---v~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+|+++++|..+++.+...|++|+.+.++.+. + ..   ...+...   ..|..+.+ +   .+.+.   |++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999998876543 2 22   2223221   23333332 2   22221   569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |+++.+.|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.95  E-value=0.069  Score=48.91  Aligned_cols=96  Identities=19%  Similarity=0.277  Sum_probs=70.8

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ..||+.......|....---.|++++|.|.+..+|.=+..++...+++|+.+.+.                  +.++.+.
T Consensus       210 f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~------------------T~nl~~~  271 (364)
T PLN02616        210 FVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------------------TKNPEEI  271 (364)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCC------------------CCCHHHH
Confidence            4566666666655433222479999999999999999999999999988876322                  2233444


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|+++-++|.+..  ---+++++|..+|.+|..
T Consensus       272 ~r~-ADIVIsAvGkp~~--i~~d~vK~GAvVIDVGIn  305 (364)
T PLN02616        272 TRE-ADIIISAVGQPNM--VRGSWIKPGAVVIDVGIN  305 (364)
T ss_pred             Hhh-CCEEEEcCCCcCc--CCHHHcCCCCEEEecccc
Confidence            444 9999999999844  336789999999999965

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.94  E-value=0.075  Score=50.41  Aligned_cols=73  Identities=15%  Similarity=0.162  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      -.+.+++|.| +|.+|.+++..+...|+ +++.+.|+.++  .++.+++...++.+  .++.+.+.. +|+||.|++.+.
T Consensus       179 l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--~~l~~~l~~-aDiVI~aT~a~~  254 (414)
T PRK13940        179 ISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--SELPQLIKK-ADIIIAAVNVLE  254 (414)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--HHHHHHhcc-CCEEEECcCCCC
Confidence            4678999999 79999999999999997 56666666554  45566652223322  234444545 999999999973

>PRK06194 hypothetical protein; Provisional

Probab=95.92  E-value=0.044  Score=49.26  Aligned_cols=73  Identities=25%  Similarity=0.361  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH---HcCCce-ee--eCCCh-hHHH---Hhc---CCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AAGAEQ-AV--DYSSK-DIEL---AIK---GKFD  239 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~---~~g~~~-v~--~~~~~-~~~~---~i~---g~~D  239 (364)
                      +.++||+||+|.+|..+++.+...|++|+.+.++.+.  +...   ..+... ++  |..+. ++..   .+.   |++|
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id   85 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH   85 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999988776442  2222   223321 12  33332 2222   221   4589


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        86 ~vi~~Ag~   93 (287)
T PRK06194         86 LLFNNAGV   93 (287)
T ss_pred             EEEECCCC
Confidence            99999986

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.91  E-value=0.076  Score=45.68  Aligned_cols=98  Identities=16%  Similarity=0.231  Sum_probs=63.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-H----HHHHcCCce--eeeCCChhHHHHhcCCc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-D----RVLAAGAEQ--AVDYSSKDIELAIKGKF  238 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~----~~~~~g~~~--v~~~~~~~~~~~i~g~~  238 (364)
                      +...++++++||-.|  ++.|..++.+++..+.  +|+++..+++. +    .+.+.|.+.  ++..+..+..... +++
T Consensus        71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~-~~f  147 (215)
T TIGR00080        71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPL-APY  147 (215)
T ss_pred             HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCccc-CCC
Confidence            556789999999998  3468888888887654  69999776553 2    345556543  2222211111111 249


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      |+|+-............+.|++||+++..-
T Consensus       148 D~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~  177 (215)
T TIGR00080       148 DRIYVTAAGPKIPEALIDQLKEGGILVMPV  177 (215)
T ss_pred             CEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence            998865554446678889999999988653

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.045  Score=48.19  Aligned_cols=74  Identities=22%  Similarity=0.351  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce-e--eeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ-A--VDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~-v--~~~~~~~----~~~~i~---g~~  238 (364)
                      .+++++|+|+++++|..+++.+...|++|+.+.++++. + .   +++.+.+. .  .|..+.+    +.+.+.   +++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            46789999999999999999999999999999876543 2 2   23334321 2  2333322    222221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK08017 oxidoreductase; Provisional

Probab=95.90  E-value=0.055  Score=47.61  Aligned_cols=72  Identities=17%  Similarity=0.282  Sum_probs=50.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChh----HHHHhc----CCccEEEECC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKD----IELAIK----GKFDAVLDTI  245 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~----~~~~i~----g~~D~vid~~  245 (364)
                      ++++|+|++|.+|..+++.+...|++|+++.++.+. +.+++.++..+ .|..+.+    ..+.+.    +++|.++.+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            579999999999999999999999999999887654 55566665432 3443322    122221    3478999887


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        83 g~   84 (256)
T PRK08017         83 GF   84 (256)
T ss_pred             CC
Confidence            74

>PLN02253 xanthoxin dehydrogenase

Probab=95.90  E-value=0.056  Score=48.36  Aligned_cols=74  Identities=20%  Similarity=0.301  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC--c-e--eeeCCChh-HHH---Hhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA--E-Q--AVDYSSKD-IEL---AIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~--~-~--v~~~~~~~-~~~---~i~---g~~D  239 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.+.++.  +...+++.  . .  ..|..+.+ +..   .+.   |++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            36789999999999999999988899999998776543  23333322  1 1  23443332 222   221   4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.13  Score=44.76  Aligned_cols=97  Identities=22%  Similarity=0.338  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH------HHHHHcCCc-ee--eeCCCh-hHHH---Hhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI------DRVLAAGAE-QA--VDYSSK-DIEL---AIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~------~~~~~~g~~-~v--~~~~~~-~~~~---~i~---g~  237 (364)
                      ++.+++|+|++|.+|..+++.+...|++++.+.++...      +.+...+.. ..  .|..+. ++.+   .+.   ++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999998887654321      122333322 12  233332 2222   221   45


Q ss_pred             ccEEEECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|.+.|...                         .++.+++.++.+|+++.++..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS  141 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence            999999988421                         023445556677899988753

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.02  Score=50.67  Aligned_cols=72  Identities=31%  Similarity=0.484  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCChh----HHHHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKD----IELAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~~----~~~~i~---g~~D~vid~~  245 (364)
                      .|++++|+|++|++|..+++.+...|++|+++.++......  .... ...|..+.+    +.+.+.   +++|++|.+.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   85 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL   85 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            47899999999999999999999999999999876543210  0111 112333332    122221   4599999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        86 g~   87 (260)
T PRK06523         86 GG   87 (260)
T ss_pred             cc
Confidence            83

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.89  E-value=0.037  Score=44.72  Aligned_cols=76  Identities=25%  Similarity=0.361  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCC----hhHHHHhc------CCccE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSS----KDIELAIK------GKFDA  240 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~----~~~~~~i~------g~~D~  240 (364)
                      .+|-..+|+|+++++|.+++..+...|+.|+...-+..+  +.++++|-..++..-+    ++....+.      |+.|+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            356677999999999999999999999999988665554  7789999876665432    23322222      67999


Q ss_pred             EEECCCCc
Q 017901          241 VLDTIGAP  248 (364)
Q Consensus       241 vid~~g~~  248 (364)
                      .++|.|-.
T Consensus        87 ~vncagia   94 (260)
T KOG1199|consen   87 LVNCAGIA   94 (260)
T ss_pred             eeecccee
Confidence            99999964

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.042  Score=49.24  Aligned_cols=74  Identities=20%  Similarity=0.284  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+|++|++|..+++.+...|++|+.+.++...  +.   ++..+...   ..|..+.+ +   .+.+.   |++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            47889999999999999999999999999988776542  22   22334321   12333322 2   22221   558


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999999884

>PRK08177 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.053  Score=46.81  Aligned_cols=72  Identities=18%  Similarity=0.310  Sum_probs=48.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee--eeCCChh----HHHHhc-CCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA--VDYSSKD----IELAIK-GKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v--~~~~~~~----~~~~i~-g~~D~vid~~g~  247 (364)
                      ++++|+|++|.+|...++.+...|++|+++.++... ..+.+++....  .|..+.+    +.+.+. +++|++|.+.|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            479999999999999999998899999999887653 33444332222  2333322    233332 348999998864

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.87  E-value=0.096  Score=46.70  Aligned_cols=97  Identities=15%  Similarity=0.222  Sum_probs=70.7

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCCh
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSK  228 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~  228 (364)
                      +..||+....+..|....---.|++++|.|.+..+|.=+..++...    +++|+.+-+                  .+.
T Consensus       131 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs------------------~T~  192 (287)
T PRK14181        131 GFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHS------------------QSE  192 (287)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCC------------------CCC
Confidence            3457776666666644332346999999999999999999999887    677775422                  222


Q ss_pred             hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++.+.++. +|+++-++|.+..  ---+++++|..++.+|..
T Consensus       193 ~l~~~~~~-ADIvV~AvG~p~~--i~~~~ik~GavVIDvGin  231 (287)
T PRK14181        193 NLTEILKT-ADIIIAAIGVPLF--IKEEMIAEKAVIVDVGTS  231 (287)
T ss_pred             CHHHHHhh-CCEEEEccCCcCc--cCHHHcCCCCEEEEeccc
Confidence            34444444 9999999999843  346889999999999965

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.86  E-value=0.056  Score=51.14  Aligned_cols=73  Identities=16%  Similarity=0.241  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCc-ee--eeCCChh-HHHHhcCCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAE-QA--VDYSSKD-IELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~-~v--~~~~~~~-~~~~i~g~~D~vid~~g~  247 (364)
                      .+++++|+||+|++|.+.++.+...|++|+++.++++. . .....+.. ..  .|..+.+ +.+.+ +++|++|.+.|.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-~~IDiLInnAGi  255 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-EKVDILIINHGI  255 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-CCCCEEEECCCc
Confidence            46899999999999999999998899999999876543 2 12211111 12  2434432 33333 349999998874

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.86  E-value=0.087  Score=46.94  Aligned_cols=95  Identities=15%  Similarity=0.260  Sum_probs=70.7

Q ss_pred             cccchHHHHHHHHHHhcccC-CCCEEEEEcCCchHHHHHHHHHHH--cCCeEEEeeCCccHHHHHHcCCceeeeCCChhH
Q 017901          154 AIPFAALTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVA--SGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDI  230 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~-~g~~vli~g~~g~~G~~~~~~a~~--~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~  230 (364)
                      ..||+....+..|. .-++. .|++++|.|.+..+|.=++.++..  .+++|+.+-+                  .+.++
T Consensus       137 ~~PcTp~av~~ll~-~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs------------------~T~~l  197 (284)
T PRK14193        137 PLPCTPRGIVHLLR-RYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHT------------------GTRDL  197 (284)
T ss_pred             CCCCCHHHHHHHHH-HhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCC------------------CCCCH
Confidence            45777766666663 44443 699999999999999999999987  6888876633                  22334


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       231 ~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.++. +|+++-++|.+..  ---+++++|..++.+|..
T Consensus       198 ~~~~k~-ADIvV~AvGkp~~--i~~~~ik~GavVIDvGin  234 (284)
T PRK14193        198 AAHTRR-ADIIVAAAGVAHL--VTADMVKPGAAVLDVGVS  234 (284)
T ss_pred             HHHHHh-CCEEEEecCCcCc--cCHHHcCCCCEEEEcccc
Confidence            445554 9999999999843  336789999999999965

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.032  Score=49.11  Aligned_cols=73  Identities=26%  Similarity=0.364  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCCh-hH---HHHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DI---ELAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~---~~~i~---g~~D~vid~~  245 (364)
                      .+++++|+|++|++|..+++.+...|++|+.+.++.... .....+. ...|..+. ++   .+.+.   +++|++|.+.
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   83 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNA   83 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            478999999999999999999999999999998765431 1111111 12233332 22   22221   4589999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        84 g~   85 (252)
T PRK07856         84 GG   85 (252)
T ss_pred             CC
Confidence            74

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.85  E-value=0.058  Score=47.72  Aligned_cols=97  Identities=21%  Similarity=0.266  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceee--eCCCh-h---HHHHhc---CC
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAV--DYSSK-D---IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~--~~~~~-~---~~~~i~---g~  237 (364)
                      .|++++|+||+  +++|.++++.+...|++|+.+.++++.     +...+++....+  |..+. +   +.+.+.   |+
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            47899999987  489999999999999999888776432     222333432222  33332 2   222222   56


Q ss_pred             ccEEEECCCCch--------------h---------------HHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE--------------T---------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~--------------~---------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+++.+.|...              .               .+.++..++.+|+++.++..
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~  150 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYY  150 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecc
Confidence            999999987420              0               24556667778898877643

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.84  E-value=0.05  Score=47.93  Aligned_cols=74  Identities=23%  Similarity=0.368  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++++.  +.   +++.|... .  .|..+.+ +   .+.+.   +++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999998899999988876543  22   23333221 1  2433322 2   22221   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.04  Score=48.54  Aligned_cols=74  Identities=18%  Similarity=0.231  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCc---eeeeCCChh-HHH---Hhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAE---QAVDYSSKD-IEL---AIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~---~v~~~~~~~-~~~---~i~---g~~  238 (364)
                      .+++++|+||+|.+|..+++.+...|++|+.+.+++..  +..   .+.+..   ...|..+.+ +..   .+.   +++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            56889999999999999999999999999999876543  222   222322   123333332 221   221   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (258)
T PRK07890         84 DALVNNAFR   92 (258)
T ss_pred             cEEEECCcc
Confidence            999999874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.84  E-value=0.052  Score=49.82  Aligned_cols=73  Identities=18%  Similarity=0.281  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC---c-ee--eeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA---E-QA--VDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~---~-~v--~~~~~~~----~~~~i~---g~~  238 (364)
                      .+++++|+||+|++|..+++.+...|++|+.++++.+.  +...++..   . ..  .|..+.+    +.+.+.   +++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            46789999999999999999998899999999887653  23333321   1 11  2333322    222221   359


Q ss_pred             cEEEECCC
Q 017901          239 DAVLDTIG  246 (364)
Q Consensus       239 D~vid~~g  246 (364)
                      |++|.+.|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999988

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.83  E-value=0.045  Score=48.34  Aligned_cols=74  Identities=20%  Similarity=0.351  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHH----HHHHcCCc-e--eeeCCChh----HHHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID----RVLAAGAE-Q--AVDYSSKD----IELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~----~~~~~g~~-~--v~~~~~~~----~~~~i~---g~~D  239 (364)
                      .++++||+||++.+|...++.+...|++|+.+.++++.+    .+.+.+.. .  ..|..+.+    +.+.+.   |++|
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   93 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKID   93 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999988764322    23333432 1  22333332    222221   4589


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        94 ~li~~ag~  101 (258)
T PRK06935         94 ILVNNAGT  101 (258)
T ss_pred             EEEECCCC
Confidence            99999884

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.056  Score=47.60  Aligned_cols=73  Identities=19%  Similarity=0.266  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCc-e--eeeCCCh-hHHHHhcCCccEEEECC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE-Q--AVDYSSK-DIELAIKGKFDAVLDTI  245 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~-~--v~~~~~~-~~~~~i~g~~D~vid~~  245 (364)
                      +.+++|+|++|.+|..+++.+...|++|++++++... ..+    ...+.. .  ..|..+. ++.....+++|++|.+.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            4689999999999999999999999999999886543 222    223322 1  2244443 33333333499999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        82 g~   83 (257)
T PRK09291         82 GI   83 (257)
T ss_pred             Cc
Confidence            83

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.81  E-value=0.072  Score=46.94  Aligned_cols=74  Identities=20%  Similarity=0.389  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-HHHHHcCCce-eeeCCChh-H---HHHhc---CCccEEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVLAAGAEQ-AVDYSSKD-I---ELAIK---GKFDAVLD  243 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~~~~~~g~~~-v~~~~~~~-~---~~~i~---g~~D~vid  243 (364)
                      .+++++|+|++|++|..+++.+...|++|+.+.+..+ . +.+.+.+... ..|..+.+ .   .+.+.   +++|++|.
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4688999999999999999999999999988755432 2 3333333322 23443332 2   22221   45999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      |.|.
T Consensus        86 ~ag~   89 (255)
T PRK06463         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9875

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.79  E-value=0.086  Score=48.59  Aligned_cols=88  Identities=17%  Similarity=0.211  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE--  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~--  251 (364)
                      .|+++.|.| .|.+|...++.++.+|.+|++..+..+.......+..    +  .++.+.+.. .|+|+-++......  
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~----~--~~l~ell~~-aDiV~l~lP~t~~T~~  220 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAE----Y--RPLEELLRE-SDFVSLHVPLTKETYH  220 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCE----e--cCHHHHHhh-CCEEEEeCCCChHHhh
Confidence            578999999 8999999999999999999988765544333444432    1  133444444 89999988764221  


Q ss_pred             ---HHHHhhccCCCEEEEEcc
Q 017901          252 ---RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~  269 (364)
                         ...+..++++..+|.++-
T Consensus       221 ~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        221 MINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             ccCHHHHhcCCCCeEEEECcC
Confidence               366788899988888763

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.79  E-value=0.059  Score=47.48  Aligned_cols=74  Identities=19%  Similarity=0.281  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCc-ee--eeCCCh-h---HHHHhc---CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAE-QA--VDYSSK-D---IELAIK---GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~-~v--~~~~~~-~---~~~~i~---g~~D~  240 (364)
                      .|++++|+|+++++|..+++.+...|++|+.+.+.+..   +.+.+.+.. ..  .|..+. +   +.+.+.   +++|+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46799999999999999999999999999987554322   233444432 11  233332 2   222222   55999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        89 li~~Ag~   95 (253)
T PRK08993         89 LVNNAGL   95 (253)
T ss_pred             EEECCCC
Confidence            9999885

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.78  E-value=0.07  Score=47.10  Aligned_cols=74  Identities=23%  Similarity=0.377  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHcCCce---eeeCCCh-h---HHHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAAGAEQ---AVDYSSK-D---IELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~g~~~---v~~~~~~-~---~~~~i~---g~~D  239 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.+++.. +.   +...+.+.   ..|..+. +   +.+.+.   +++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            46789999999999999999999999999988876543 22   22334321   2344432 1   222221   4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        87 ~lv~nAg~   94 (260)
T PRK12823         87 VLINNVGG   94 (260)
T ss_pred             EEEECCcc
Confidence            99999873

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.77  E-value=0.1  Score=46.86  Aligned_cols=96  Identities=19%  Similarity=0.266  Sum_probs=69.4

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCChh
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSKD  229 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~  229 (364)
                      ..||+....+..|....---.|++++|.|.+..+|.=++.++...    +++|+.+-+.                  +.+
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~------------------T~~  197 (297)
T PRK14167        136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSR------------------TDD  197 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCC------------------CCC
Confidence            456766666666643322357999999999999999999999876    7888775221                  122


Q ss_pred             HHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          230 IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       230 ~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.+.++. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       198 l~~~~~~-ADIvIsAvGkp~~i~--~~~ik~gaiVIDvGin  235 (297)
T PRK14167        198 LAAKTRR-ADIVVAAAGVPELID--GSMLSEGATVIDVGIN  235 (297)
T ss_pred             HHHHHhh-CCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence            3334444 999999999985443  4889999999999965

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.76  E-value=0.056  Score=47.73  Aligned_cols=74  Identities=18%  Similarity=0.287  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++++.  +   .+++.+... .  .|.++.+ +   .+.+.   +++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999988877642  2   233444432 1  2333332 1   22221   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.|.|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999999885

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.074  Score=46.95  Aligned_cols=77  Identities=22%  Similarity=0.298  Sum_probs=49.9

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH---HH---HHHcCC-c-ee--eeCCCh-h---HHHHhc
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI---DR---VLAAGA-E-QA--VDYSSK-D---IELAIK  235 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~---~~---~~~~g~-~-~v--~~~~~~-~---~~~~i~  235 (364)
                      .+.++.+++|+||+|++|...++.+...| ++|+++.++.+.   +.   +...+. + ++  .|..+. +   +.+.+.
T Consensus         4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            35678899999999999999998877774 899999876542   22   333332 1 12  233332 2   222222


Q ss_pred             --CCccEEEECCCC
Q 017901          236 --GKFDAVLDTIGA  247 (364)
Q Consensus       236 --g~~D~vid~~g~  247 (364)
                        |++|+++.+.|.
T Consensus        84 ~~g~id~li~~ag~   97 (253)
T PRK07904         84 AGGDVDVAIVAFGL   97 (253)
T ss_pred             hcCCCCEEEEeeec
Confidence              459999988765

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.74  E-value=0.09  Score=47.93  Aligned_cols=97  Identities=19%  Similarity=0.212  Sum_probs=70.9

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...||+.......|....---.|++++|.|.+..+|.=+..++...+++|+.+.+.                  +.++.+
T Consensus       192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~------------------T~nl~~  253 (345)
T PLN02897        192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAF------------------TKDPEQ  253 (345)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCC------------------CCCHHH
Confidence            34566666666666433223479999999999999999999999999998766332                  122333


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..  ---+++++|..+|.+|..
T Consensus       254 ~~~~-ADIvIsAvGkp~~--v~~d~vk~GavVIDVGin  288 (345)
T PLN02897        254 ITRK-ADIVIAAAGIPNL--VRGSWLKPGAVVIDVGTT  288 (345)
T ss_pred             HHhh-CCEEEEccCCcCc--cCHHHcCCCCEEEEcccc
Confidence            3444 9999999999844  346889999999999965

>PRK06484 short chain dehydrogenase; Validated

Probab=95.73  E-value=0.058  Score=53.07  Aligned_cols=74  Identities=26%  Similarity=0.396  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCCh-hH---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSK-DI---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~-~~---~~~i~---g~~D~v  241 (364)
                      .+++++|+|+++++|..+++.+...|++|+.+.++...  +...+++...   .+|..+. ++   .+.+.   |++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999776553  3445555432   2344433 22   22222   559999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            999874

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.72  E-value=0.024  Score=51.01  Aligned_cols=143  Identities=20%  Similarity=0.232  Sum_probs=78.9

Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH--HHHHHHhcccCCCCEEEEEcCCch
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA--WRALKCAARMSEGQRLLVLGGGGA  186 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta--~~~l~~~~~~~~g~~vli~g~~g~  186 (364)
                      .+++|++.+..+.       |.+|-.-+.+.++.+.+++.+-..    ....|.  ...|.+  ...+|++||=.|  .+
T Consensus       107 P~~vg~~~~I~P~-------w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lcl~~l~~--~~~~g~~vLDvG--~G  171 (295)
T PF06325_consen  107 PIRVGDRLVIVPS-------WEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLCLELLEK--YVKPGKRVLDVG--CG  171 (295)
T ss_dssp             -EEECTTEEEEET-------T----SSTTSEEEEESTTSSS-SS----HCHHHHHHHHHHHH--HSSTTSEEEEES---T
T ss_pred             cEEECCcEEEECC-------CcccCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHH--hccCCCEEEEeC--Cc
Confidence            3667886666543       555522234455666666543322    111121  222322  257889999998  33


Q ss_pred             HHHHHHHHHHHcCC-eEEEeeCCccH-----HHHHHcCCceeee-CCChhHHHHhcCCccEEEECCCCch---hHHHHHh
Q 017901          187 VGFAAVQFSVASGC-HVSATCGSKSI-----DRVLAAGAEQAVD-YSSKDIELAIKGKFDAVLDTIGAPE---TERLGLN  256 (364)
Q Consensus       187 ~G~~~~~~a~~~g~-~vi~~~~~~~~-----~~~~~~g~~~v~~-~~~~~~~~~i~g~~D~vid~~g~~~---~~~~~~~  256 (364)
                      .|.+++..++. |+ +|+++..++..     +.+...|...-+. ....+..   .+++|+|+-+.-...   ......+
T Consensus       172 SGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~---~~~~dlvvANI~~~vL~~l~~~~~~  247 (295)
T PF06325_consen  172 SGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV---EGKFDLVVANILADVLLELAPDIAS  247 (295)
T ss_dssp             TSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC---CS-EEEEEEES-HHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc---cccCCEEEECCCHHHHHHHHHHHHH
Confidence            57888777775 77 79999665542     3344455432221 1111111   245999999888752   3456677


Q ss_pred             hccCCCEEEEEccC
Q 017901          257 FLKRGGHYMTLHGE  270 (364)
Q Consensus       257 ~l~~~G~~v~~g~~  270 (364)
                      +++++|.+++-|..
T Consensus       248 ~l~~~G~lIlSGIl  261 (295)
T PF06325_consen  248 LLKPGGYLILSGIL  261 (295)
T ss_dssp             HEEEEEEEEEEEEE
T ss_pred             hhCCCCEEEEcccc
Confidence            89999999999976

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.71  E-value=0.053  Score=48.36  Aligned_cols=76  Identities=25%  Similarity=0.275  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCc------eeeeCCChhHHHHh-------
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAE------QAVDYSSKDIELAI-------  234 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~------~v~~~~~~~~~~~i-------  234 (364)
                      -.|+.++|+|++.++|.+.+..+...|++|+.+.++++.  +..   ...+..      .+.|....+..+.+       
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999887764  222   233332      12333332211111       


Q ss_pred             -cCCccEEEECCCCc
Q 017901          235 -KGKFDAVLDTIGAP  248 (364)
Q Consensus       235 -~g~~D~vid~~g~~  248 (364)
                       .|+.|+.+++.|..
T Consensus        86 ~~GkidiLvnnag~~  100 (270)
T KOG0725|consen   86 FFGKIDILVNNAGAL  100 (270)
T ss_pred             hCCCCCEEEEcCCcC
Confidence             16799999988853

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.70  E-value=0.1  Score=46.83  Aligned_cols=97  Identities=15%  Similarity=0.230  Sum_probs=71.3

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCCh
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSK  228 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~  228 (364)
                      +..||+.......|....---.|++++|.|.+..+|.=++.++...    +++|+.+-+.                  +.
T Consensus       139 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~------------------T~  200 (297)
T PRK14168        139 KFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTR------------------SK  200 (297)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCC------------------Cc
Confidence            3457777666666644333357999999999999999999999887    6788765322                  22


Q ss_pred             hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++.+.++. +|+++-++|.+..+  --+++++|..++.+|..
T Consensus       201 ~l~~~~~~-ADIvVsAvGkp~~i--~~~~ik~gavVIDvGin  239 (297)
T PRK14168        201 NLARHCQR-ADILIVAAGVPNLV--KPEWIKPGATVIDVGVN  239 (297)
T ss_pred             CHHHHHhh-CCEEEEecCCcCcc--CHHHcCCCCEEEecCCC
Confidence            34444444 99999999998443  36789999999999965

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.70  E-value=0.11  Score=46.32  Aligned_cols=96  Identities=17%  Similarity=0.202  Sum_probs=70.8

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHH----cCCeEEEeeCCccHHHHHHcCCceeeeCCChh
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA----SGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD  229 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~----~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~  229 (364)
                      ..||+....+..|....---.|++++|.|.+..+|.=+..++..    .+++|+.+.+.                  +.+
T Consensus       136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~------------------t~~  197 (286)
T PRK14184        136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSR------------------TPD  197 (286)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCC------------------chh
Confidence            45777766666664433234789999999999999999999987    78888776432                  223


Q ss_pred             HHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          230 IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       230 ~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.+.++. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       198 l~~~~~~-ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~  235 (286)
T PRK14184        198 LAEECRE-ADFLFVAIGRPRFVT--ADMVKPGAVVVDVGIN  235 (286)
T ss_pred             HHHHHHh-CCEEEEecCCCCcCC--HHHcCCCCEEEEeeee
Confidence            4444444 999999999984443  4778999999999965

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.69  E-value=0.13  Score=45.10  Aligned_cols=70  Identities=19%  Similarity=0.316  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-ee--eeCCCh-hHH---HHhc---CCccEEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QA--VDYSSK-DIE---LAIK---GKFDAVLD  243 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v--~~~~~~-~~~---~~i~---g~~D~vid  243 (364)
                      .+++++|+|++|.+|..+++.+...|++|+++.++.    ....+.. ..  .|..+. ++.   +.+.   +++|++|.
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN   82 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            467899999999999999999989999999998765    1111211 11  233332 222   2221   45899999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        83 ~ag~   86 (252)
T PRK08220         83 AAGI   86 (252)
T ss_pred             CCCc
Confidence            9885

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.66  E-value=0.11  Score=44.21  Aligned_cols=91  Identities=18%  Similarity=0.248  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~  251 (364)
                      .|.+|+|.| +|.+|..-++.+...|++|+++.....  ...+.+.|--..+.. ... ...+.+ +|+||-+++.+..-
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~-~~~-~~dl~~-~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLAR-CFD-ADILEG-AFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeC-CCC-HHHhCC-cEEEEECCCCHHHH
Confidence            467999999 799999999999999999988865433  233333332112211 111 223446 99999999997444


Q ss_pred             HHHHhhccCCCEEEEEc
Q 017901          252 RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g  268 (364)
                      .......+..|.+|.+.
T Consensus        84 ~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        84 RRVAHAARARGVPVNVV  100 (205)
T ss_pred             HHHHHHHHHcCCEEEEC
Confidence            55666666777777554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.63  E-value=0.074  Score=47.18  Aligned_cols=74  Identities=18%  Similarity=0.361  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCcee--eeCCCh-h---HHHHhc---CC
Q 017901          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQA--VDYSSK-D---IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~v--~~~~~~-~---~~~~i~---g~  237 (364)
                      .+++++|+||  ++++|.+.++.+...|++|+.+.+.++. +.+    .+.+....  .|..+. +   +.+.+.   |+
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5689999996  5699999999999999999887654432 222    23332222  233332 2   222222   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|+++++.|.
T Consensus        85 iD~lVnnAG~   94 (261)
T PRK08690         85 LDGLVHSIGF   94 (261)
T ss_pred             CcEEEECCcc
Confidence            9999999875

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.082  Score=46.56  Aligned_cols=74  Identities=23%  Similarity=0.314  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---H---HHHHcCCc-ee--eeCCCh-hHHH---Hhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---D---RVLAAGAE-QA--VDYSSK-DIEL---AIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~---~~~~~g~~-~v--~~~~~~-~~~~---~i~---g~  237 (364)
                      .+++++|+|+++++|..+++.+...|++|+.+.++...   +   .+...+.. ..  .|..+. ++.+   .+.   |+
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999998765431   2   22333422 12  233332 2222   221   55


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999985

>PRK06398 aldose dehydrogenase; Validated

Probab=95.59  E-value=0.049  Score=48.17  Aligned_cols=70  Identities=21%  Similarity=0.265  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCCh-hH---HHHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DI---ELAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~---~~~i~---g~~D~vid~~  245 (364)
                      .|++++|+|+++++|..+++.+...|++|+.+.+++....    ... ...|..+. ++   .+.+.   +++|++|.+.
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A   80 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4689999999999999999999999999999877654311    111 12233333 22   22222   4599999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        81 g~   82 (258)
T PRK06398         81 GI   82 (258)
T ss_pred             CC
Confidence            74

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.59  E-value=0.074  Score=47.13  Aligned_cols=74  Identities=22%  Similarity=0.325  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCcee--eeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQA--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v--~~~~~~~----~~~~i~---g~  237 (364)
                      .|++++|+||++  ++|.++++.+...|++|+...++++. +    +..+.|....  .|..+.+    +.+.+.   |+
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            568899999886  89999998888889999888765421 1    2233343322  3444332    222221   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|+++++.|.
T Consensus        87 iDilVnnag~   96 (260)
T PRK06603         87 FDFLLHGMAF   96 (260)
T ss_pred             ccEEEEcccc
Confidence            9999998874

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.077  Score=46.67  Aligned_cols=73  Identities=19%  Similarity=0.327  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCc-eee--eCCChh-H---HHHhc---CCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAE-QAV--DYSSKD-I---ELAIK---GKFD  239 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~-~v~--~~~~~~-~---~~~i~---g~~D  239 (364)
                      |++++|.|+++++|...++.+...|++|+++.++... + .   +.+.+.. ..+  |..+.+ +   .+.+.   +++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            4689999999999999999999999999999876542 2 2   2222322 122  333332 2   22221   4589


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.58  E-value=0.069  Score=47.09  Aligned_cols=74  Identities=22%  Similarity=0.290  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-ee--eeCCCh-hHHH---Hhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSK-DIEL---AIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~-~~~~---~i~---g~~D~v  241 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++.+.  ....+++.. ..  .|..+. +...   .+.   +++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35789999999999999999999999999999877654  233333322 11  233332 2222   221   458999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      +.+.|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998874

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.064  Score=47.01  Aligned_cols=74  Identities=23%  Similarity=0.355  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc--CCc-eee--eCCCh-hHH---HHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA--GAE-QAV--DYSSK-DIE---LAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~--g~~-~v~--~~~~~-~~~---~~i~---g~~D  239 (364)
                      .+.+++|.|++|.+|..+++.+...|++|+.+.++.+.  ....++  +.. ..+  |..+. ++.   +.+.   +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999888889999999887653  222222  221 122  33332 222   2221   4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999985

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.56  E-value=0.096  Score=47.02  Aligned_cols=93  Identities=18%  Similarity=0.304  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      ..+.+++|.| +|++|.+++..+...| .+|+.+.|+.++  +++.+++....+.. ..+..+.+.+ +|+||+|++...
T Consensus       121 ~~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~-~DivInaTp~g~  197 (278)
T PRK00258        121 LKGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELAD-FDLIINATSAGM  197 (278)
T ss_pred             CCCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhcccc-CCEEEECCcCCC
Confidence            4567899999 6999999999999999 588888887654  33444432110111 1122233334 999999988641


Q ss_pred             h-----HHHHHhhccCCCEEEEEc
Q 017901          250 T-----ERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       250 ~-----~~~~~~~l~~~G~~v~~g  268 (364)
                      .     ......+++++..++.+-
T Consensus       198 ~~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        198 SGELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEee
Confidence            1     122345677777777664

>PRK04148 hypothetical protein; Provisional

Probab=95.56  E-value=0.13  Score=40.38  Aligned_cols=89  Identities=15%  Similarity=0.130  Sum_probs=58.0

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC-CChhHHHHhcCCccEEEECCCC
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY-SSKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~-~~~~~~~~i~g~~D~vid~~g~  247 (364)
                      ....++.++++.| .| .|...+..+...|..|+++..+++. +.+++.+.+.+.+. .+.++ +.-.+ +|+++.+-..
T Consensus        12 ~~~~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-~~y~~-a~liysirpp   87 (134)
T PRK04148         12 YEKGKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-EIYKN-AKLIYSIRPP   87 (134)
T ss_pred             cccccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-HHHhc-CCEEEEeCCC
Confidence            3334568899999 77 8876666666789999999877765 77777776544331 11111 11114 8999998888


Q ss_pred             chhHHHHHhhccCCC
Q 017901          248 PETERLGLNFLKRGG  262 (364)
Q Consensus       248 ~~~~~~~~~~l~~~G  262 (364)
                      ++.....++..+.-|
T Consensus        88 ~el~~~~~~la~~~~  102 (134)
T PRK04148         88 RDLQPFILELAKKIN  102 (134)
T ss_pred             HHHHHHHHHHHHHcC
Confidence            755555555554433

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.075  Score=46.72  Aligned_cols=74  Identities=22%  Similarity=0.302  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc-ee--eeCCCh-hH---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE-QA--VDYSSK-DI---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~-~v--~~~~~~-~~---~~~i~---g~~  238 (364)
                      .+++++|.|++|.+|..+++.+...|++|+.+.++++.     +.+.+.+.. ..  .|..+. ++   .+.+.   |++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999998899999999887543     122333332 12  233332 22   22221   558


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999999884

>PLN02928 oxidoreductase family protein

Probab=95.55  E-value=0.12  Score=47.99  Aligned_cols=94  Identities=20%  Similarity=0.155  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcC----C-ceeee--CCChhHHHHhcCCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAG----A-EQAVD--YSSKDIELAIKGKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g----~-~~v~~--~~~~~~~~~i~g~~D~vid~~g  246 (364)
                      .|+++.|.| .|.+|..+++.++.+|++|++..++........++    . ....+  ....++.+.+.. .|+|+.++.
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~-aDiVvl~lP  235 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGE-ADIVVLCCT  235 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhh-CCEEEECCC
Confidence            578999999 89999999999999999999987653322111110    0 00000  112244555545 899999887


Q ss_pred             Cchh-----HHHHHhhccCCCEEEEEcc
Q 017901          247 APET-----ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       247 ~~~~-----~~~~~~~l~~~G~~v~~g~  269 (364)
                      ....     -...+..|+++..+|.++-
T Consensus       236 lt~~T~~li~~~~l~~Mk~ga~lINvaR  263 (347)
T PLN02928        236 LTKETAGIVNDEFLSSMKKGALLVNIAR  263 (347)
T ss_pred             CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence            5322     1477889999999998873

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.55  E-value=0.16  Score=44.43  Aligned_cols=96  Identities=19%  Similarity=0.285  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--H-H---HHHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--I-D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~-~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      +.+++|.|++|.+|..+++.+...|++|+.+.++..  . .   .+++.+... .  .|.++.+ +   .+.+.   +++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999988889999887765432  1 1   223334321 2  2333322 2   22221   348


Q ss_pred             cEEEECCCCc----------h---------------hHHHHHhhccCCCEEEEEccC
Q 017901          239 DAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |++|.+.|..          +               ..+.+.+.++..|+++.++..
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~  142 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV  142 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence            9999999841          0               023455666778899998864

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.097  Score=45.61  Aligned_cols=75  Identities=20%  Similarity=0.288  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCc-ee--eeCCCh-hH---HHHhc---CC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAE-QA--VDYSSK-DI---ELAIK---GK  237 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~-~v--~~~~~~-~~---~~~i~---g~  237 (364)
                      ..+++++|.|++|.+|..++..+...|++|+++.++.+.  +..   .+.+.. ..  .|.++. ++   .+.+.   ++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            346789999999999999999999999999999887653  222   222222 12  233332 22   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        84 id~lv~~ag~   93 (241)
T PRK07454         84 PDVLINNAGM   93 (241)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.076  Score=46.88  Aligned_cols=73  Identities=14%  Similarity=0.186  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCC--c-e--eeeCCCh-hHHH---Hhc---CCccE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGA--E-Q--AVDYSSK-DIEL---AIK---GKFDA  240 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~--~-~--v~~~~~~-~~~~---~i~---g~~D~  240 (364)
                      +.+++|+|++|++|..+++.+...|++|+.+.++.+. + ...++..  . .  ..|..+. ++.+   .+.   |++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4689999999999999999999899999999876543 2 2232221  1 1  1233333 2222   221   45899


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        82 lv~~ag~   88 (257)
T PRK07024         82 VIANAGI   88 (257)
T ss_pred             EEECCCc
Confidence            9999874

>PRK09242 tropinone reductase; Provisional

Probab=95.52  E-value=0.074  Score=46.90  Aligned_cols=74  Identities=19%  Similarity=0.259  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHH---c--CCce---eeeCCChh----HHHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLA---A--GAEQ---AVDYSSKD----IELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~---~--g~~~---v~~~~~~~----~~~~i~---g  236 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++.+.  +...+   .  +...   ..|..+.+    +.+.+.   +
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999876543  22222   2  2211   12333322    222221   5


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            59999999985

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.072  Score=46.99  Aligned_cols=74  Identities=18%  Similarity=0.228  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHcCCc-e--eeeCCChh-HHH---Hhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAAGAE-Q--AVDYSSKD-IEL---AIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~g~~-~--v~~~~~~~-~~~---~i~---g~~D  239 (364)
                      .+.+++|+||+|.+|..+++.+...|++|+.+.+++.. +.   +++.+.. .  ..|..+.+ +..   .+.   +++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            46789999999999999999999999999888776543 22   2333432 1  22333322 222   221   4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        86 ~vi~~ag~   93 (258)
T PRK08628         86 GLVNNAGV   93 (258)
T ss_pred             EEEECCcc
Confidence            99999984

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.081  Score=46.67  Aligned_cols=74  Identities=24%  Similarity=0.360  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-H----HHHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-D----RVLAAGAEQ---AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|.|++|.+|..+++.+...|++ |+.+.++.+. .    .+.+.+...   ..|..+.+ +   .+.+.   ++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5688999999999999999999999998 8888776432 2    223334321   23444332 2   12221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.074  Score=48.37  Aligned_cols=37  Identities=22%  Similarity=0.373  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      .+++++|+||+|++|..+++.+...|++|+.+.++.+
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~   51 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLD   51 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            5689999999999999999988888999999888654

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.07  Score=48.60  Aligned_cols=35  Identities=29%  Similarity=0.222  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            47899999999999999999999999999998775

>PRK08643 acetoin reductase; Validated

Probab=95.50  E-value=0.072  Score=46.90  Aligned_cols=73  Identities=23%  Similarity=0.394  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-H---HHHhc---CCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GKFD  239 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D  239 (364)
                      +++++|+|++|.+|..+++.+...|++|+.+.++.+.  ..   +.+.+...   ..|..+.+ +   .+.+.   +++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5689999999999999999999999999999876543  22   22333221   12333332 1   22221   4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999875

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=95.50  E-value=0.11  Score=45.79  Aligned_cols=97  Identities=18%  Similarity=0.244  Sum_probs=72.0

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...||+.......+.+..---.|.+++|.|.+.-+|.=..+++...+++|..+-+..                  .++.+
T Consensus       134 ~~~PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T------------------~~l~~  195 (283)
T COG0190         134 GFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRT------------------KDLAS  195 (283)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCC------------------CCHHH
Confidence            345677666666664433335789999999999999999999999999988764322                  22333


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+.  .+++++|..++.+|..
T Consensus       196 ~~k~-ADIvv~AvG~p~~i~--~d~vk~gavVIDVGin  230 (283)
T COG0190         196 ITKN-ADIVVVAVGKPHFIK--ADMVKPGAVVIDVGIN  230 (283)
T ss_pred             Hhhh-CCEEEEecCCccccc--cccccCCCEEEecCCc
Confidence            3334 999999999984444  6899999999999975

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.077  Score=46.94  Aligned_cols=73  Identities=19%  Similarity=0.299  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce---eeeCCCh-hHH---HHhc---CCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ---AVDYSSK-DIE---LAIK---GKFD  239 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~---v~~~~~~-~~~---~~i~---g~~D  239 (364)
                      +.+++|.|++|.+|..+++.+...|++|+++.+++.. + .   +...+...   ..|..+. .+.   +.+.   +++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3579999999999999999999999999999887543 2 1   22333321   1233332 221   2221   3489


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.|.|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.47  E-value=0.13  Score=47.02  Aligned_cols=88  Identities=15%  Similarity=0.178  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE--  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~--  251 (364)
                      .|+++.|.| .|.+|...++.++.+|.+|++..+..+..    .+.....  ...++.+.+.+ .|+|+.++...+..  
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~----~~~~~~~--~~~~l~e~l~~-aDvvv~~lPlt~~T~~  206 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW----PGVQSFA--GREELSAFLSQ-TRVLINLLPNTPETVG  206 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC----CCceeec--ccccHHHHHhc-CCEEEECCCCCHHHHH
Confidence            578999999 99999999999999999999986643321    1222121  22345555555 99999998865332  


Q ss_pred             ---HHHHhhccCCCEEEEEcc
Q 017901          252 ---RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~  269 (364)
                         ...++.|+++..+|.+|-
T Consensus       207 li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        207 IINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             HhHHHHHhcCCCCcEEEECCC
Confidence               356788999999998874

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.098  Score=46.26  Aligned_cols=74  Identities=18%  Similarity=0.246  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHcCCce---eeeCCChh-H---HHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D  239 (364)
                      .+.+++|+|++|.+|..+++.+...|++|+.+.++++. +.   +.+.+...   ..|..+.+ +   .+.+.   +++|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999998877643 22   22223221   22333322 1   22221   4589


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        85 ~vi~~ag~   92 (263)
T PRK08226         85 ILVNNAGV   92 (263)
T ss_pred             EEEECCCc
Confidence            99999884

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.082  Score=45.86  Aligned_cols=74  Identities=15%  Similarity=0.128  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCCh-h---HHHHhc---C-C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSK-D---IELAIK---G-K  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~-~---~~~~i~---g-~  237 (364)
                      .|++++|.|+++++|.+.+..+...|++|+.+.++.+.  +.   +.+.+.+. .  .|..+. +   +.+.+.   | +
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999998776553  22   23334331 1  233332 2   222221   5 6


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        84 iD~li~nag~   93 (227)
T PRK08862         84 PDVLVNNWTS   93 (227)
T ss_pred             CCEEEECCcc
Confidence            9999999873

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=95.46  E-value=0.24  Score=46.15  Aligned_cols=110  Identities=26%  Similarity=0.194  Sum_probs=67.1

Q ss_pred             hccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-------------------H
Q 017901          152 ASAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-------------------I  211 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-------------------~  211 (364)
                      |-...+.+++- .++ +.... -.|.+|.|.| .|.+|+.+++.+...|++|+++..+..                   .
T Consensus       185 aTg~Gv~~~~~-~a~-~~~g~~l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~  261 (411)
T COG0334         185 ATGYGVFYAIR-EAL-KALGDDLEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERR  261 (411)
T ss_pred             ccceehHHHHH-HHH-HHcCCCcCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhh
Confidence            33333333333 444 33343 4899999999 999999999999999999999965443                   1


Q ss_pred             -HHHHHcCCceeee-----CC-------------ChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901          212 -DRVLAAGAEQAVD-----YS-------------SKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       212 -~~~~~~g~~~v~~-----~~-------------~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~  267 (364)
                       ......|+..+-+     .+             +.+-.+.+  ++++|.+...++ +...+.+.+...|.++.-
T Consensus       262 ~~v~~~~ga~~i~~~e~~~~~cDIl~PcA~~n~I~~~na~~l--~ak~V~EgAN~P-~t~eA~~i~~erGIl~~P  333 (411)
T COG0334         262 GSVAEYAGAEYITNEELLEVDCDILIPCALENVITEDNADQL--KAKIVVEGANGP-TTPEADEILLERGILVVP  333 (411)
T ss_pred             hhHHhhcCceEccccccccccCcEEcccccccccchhhHHHh--hhcEEEeccCCC-CCHHHHHHHHHCCCEEcC
Confidence             1222234322211     00             01112222  277888888887 667777777777765543

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.081  Score=46.32  Aligned_cols=74  Identities=22%  Similarity=0.256  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-e--eeeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-Q--AVDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~--v~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+.+++|+|++|.+|..+++.+...|++|+.+.+++..  ..   +.+.+.. .  ..|..+.+ +   ...+.   +++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999998899999999887542  22   2222221 1  23333322 1   12221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.46  E-value=0.092  Score=46.41  Aligned_cols=96  Identities=20%  Similarity=0.320  Sum_probs=61.7

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCCc--c-H-HHHHHcCCc---eeeeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSK--S-I-DRVLAAGAE---QAVDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~~--~-~-~~~~~~g~~---~v~~~~~~~----~~~~i~---g~  237 (364)
                      .+++++|+|+  ++++|.++++.+...|++|+.+.++.  + . +...+++..   ...|..+.+    +.+.+.   |+
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999998  79999999999988999999887653  2 1 223334321   123333332    222222   56


Q ss_pred             ccEEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEcc
Q 017901          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|++|.+.|...                             ..+.++..++++|+++.++.
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~  146 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF  146 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence            999999887420                             01345666777889887753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.45  E-value=0.075  Score=46.48  Aligned_cols=74  Identities=27%  Similarity=0.298  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCc-eee--eCCCh-hHHH---Hhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAE-QAV--DYSSK-DIEL---AIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~-~v~--~~~~~-~~~~---~i~---g~~  238 (364)
                      .+.+++|+||+|.+|...+..+...|++|+++.++...  .   .+.+.+.. .++  |..+. ++.+   .+.   +++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999998899999999887442  1   22333322 122  33332 2222   221   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999999865

>PRK12743 oxidoreductase; Provisional

Probab=95.45  E-value=0.091  Score=46.35  Aligned_cols=73  Identities=21%  Similarity=0.291  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH-----HHHHHcCCc-ee--eeCCChh----HHHHhc---CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-----DRVLAAGAE-QA--VDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~-----~~~~~~g~~-~v--~~~~~~~----~~~~i~---g~~  238 (364)
                      +++++|+||++.+|..+++.+...|++|+.+.++. +.     +.+...+.. +.  .|..+.+    +.+.+.   +++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999998875433 22     123334432 12  2333322    222222   559


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999999884

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.43  E-value=0.16  Score=44.13  Aligned_cols=100  Identities=22%  Similarity=0.242  Sum_probs=69.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCcc-H----HHHHHcCCceeeeCCChhHHHHhc-CCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-I----DRVLAAGAEQAVDYSSKDIELAIK-GKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~-~----~~~~~~g~~~v~~~~~~~~~~~i~-g~~D  239 (364)
                      .+.++.+|++|+=.|.  +.|.+++-+|+..|.  +|+.....++ .    +.++++|....+.....|..+.+- ..+|
T Consensus        88 ~~~gi~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vD  165 (256)
T COG2519          88 ARLGISPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVD  165 (256)
T ss_pred             HHcCCCCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccC
Confidence            5688999999998883  368899999998876  7888855443 2    335566655433332233333222 1399


Q ss_pred             EEEECCCCc-hhHHHHHhhccCCCEEEEEcc
Q 017901          240 AVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       240 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ++|-=...+ +.+..+.+.|++||.++++-.
T Consensus       166 av~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         166 AVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence            877666655 688999999999999999864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.42  E-value=0.09  Score=46.97  Aligned_cols=97  Identities=23%  Similarity=0.354  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCcee--eeCCCh----hHHHHhc---CC
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQA--VDYSSK----DIELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~----~~~~~i~---g~  237 (364)
                      .+++++|+|++  +++|.+.++.+...|++|+.+.++++.     +...+++....  .|..+.    .+.+.+.   |+
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   88 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK   88 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            56889999986  799999999999999999887665321     22334453222  233332    2222222   56


Q ss_pred             ccEEEECCCCch--------------h---------------HHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE--------------T---------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~--------------~---------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+++.+.|...              .               .+.++..++.+|+++.++..
T Consensus        89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~  150 (272)
T PRK08159         89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYY  150 (272)
T ss_pred             CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecc
Confidence            999999987420              0               13445566778999887653

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.41  E-value=0.13  Score=44.80  Aligned_cols=74  Identities=26%  Similarity=0.375  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce-e--eeCCCh-hHHH---Hhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ-A--VDYSSK-DIEL---AIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~-v--~~~~~~-~~~~---~i~---g~~  238 (364)
                      ++++++|+|++|.+|...++.+...|.+|+.+.++... +    .+...+... .  .|..+. ++.+   .+.   +++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999888887543 2    123334322 1  233332 2222   211   448


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |.+|.+.|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999875

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.41  E-value=0.066  Score=52.20  Aligned_cols=73  Identities=19%  Similarity=0.231  Sum_probs=53.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+.+|++|+|.| .|..|++++++++..|++|++...... ...+++.|+.. +....  ..+.+.+ +|+|+.+.|-+
T Consensus         8 ~~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~--~~~~l~~-~D~VV~SpGi~   81 (488)
T PRK03369          8 PLLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD--AVQQIAD-YALVVTSPGFR   81 (488)
T ss_pred             cccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc--hHhHhhc-CCEEEECCCCC
Confidence            355789999999 899999999999999999999765433 24466677743 32211  2233445 89999999976

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.39  E-value=0.091  Score=46.69  Aligned_cols=73  Identities=23%  Similarity=0.416  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH----cCCcee--eeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-DRVLA----AGAEQA--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~----~g~~~v--~~~~~~~----~~~~i~---g~  237 (364)
                      .|++++|+||++  ++|.++++.+...|++|+.+.++++. +.+.+    .+....  .|..+.+    +.+.+.   |+
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            478999999875  89999999998899999887765432 22222    221112  2333332    222221   56


Q ss_pred             ccEEEECCC
Q 017901          238 FDAVLDTIG  246 (364)
Q Consensus       238 ~D~vid~~g  246 (364)
                      +|++|++.|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            999999997

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.11  Score=46.79  Aligned_cols=36  Identities=28%  Similarity=0.388  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      -.+++++|+||++++|...++.+...|++|+.+.++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~   39 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG   39 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCC
Confidence            357899999999999999999998899999888654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.35  E-value=0.1  Score=46.16  Aligned_cols=71  Identities=23%  Similarity=0.296  Sum_probs=47.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCcee--eeCCChh-H---HHHhc---CCccEEE
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAEQA--VDYSSKD-I---ELAIK---GKFDAVL  242 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~~v--~~~~~~~-~---~~~i~---g~~D~vi  242 (364)
                      +++|+|+++++|..+++.+...|++|+.+.++++.  +..   .+.+..+.  .|..+.+ .   .+.+.   |++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999999999998876543  222   22232222  2333322 2   22221   5599999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            99884

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.092  Score=46.38  Aligned_cols=74  Identities=30%  Similarity=0.486  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHc-CCc-ee--eeCCCh-hHHHHhc--CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAA-GAE-QA--VDYSSK-DIELAIK--GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~-g~~-~v--~~~~~~-~~~~~i~--g~~D~v  241 (364)
                      .+++++|.|+++++|..+++.+...|++|+++.++.+.  +.   +.+. +.. ..  .|..+. ++...+.  +++|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            46899999999999999999999999999999876543  22   2221 221 12  233332 2222222  459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        86 v~~ag~   91 (259)
T PRK06125         86 VNNAGA   91 (259)
T ss_pred             EECCCC
Confidence            999885

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.33  E-value=0.14  Score=44.68  Aligned_cols=74  Identities=23%  Similarity=0.294  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-c-H-HH---HHHcCCcee---eeCCCh-hH---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-I-DR---VLAAGAEQA---VDYSSK-DI---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~-~-~~---~~~~g~~~v---~~~~~~-~~---~~~i~---g~  237 (364)
                      .+++++|+|++|.+|..+++.+...|++|++..+.. . . +.   +.+.+....   .|..+. ++   .+.+.   ++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            367899999999999999999999999988864322 2 1 22   233344322   233332 22   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK06720 hypothetical protein; Provisional

Probab=95.30  E-value=0.13  Score=42.49  Aligned_cols=37  Identities=24%  Similarity=0.336  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      .+..++|.|+++++|..++..+...|++|+.+.++..
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~   51 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQE   51 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHH
Confidence            5789999999999999999999889999998876544

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.29  E-value=0.1  Score=45.86  Aligned_cols=74  Identities=19%  Similarity=0.305  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .++++||+||++++|..+++.+...|++|+.+.++.+.  +..   +..+... .  .|..+.+ +   .+.+.   +++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            46789999999999999999999999999998876543  222   2223221 2  2333322 2   22222   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |+++.+.|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.25  E-value=0.19  Score=42.99  Aligned_cols=96  Identities=26%  Similarity=0.289  Sum_probs=59.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce--eeeCCCh-hHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ--AVDYSSK-DIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~--v~~~~~~-~~~~~i~g~~D  239 (364)
                      ....++++++||-.|+ | .|..+..+++.. .+|+++..+++. +    .+.+.+.+.  +...+.. .+. . .+++|
T Consensus        72 ~~l~~~~~~~VLeiG~-G-sG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~-~~~fD  146 (212)
T PRK00312         72 ELLELKPGDRVLEIGT-G-SGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP-A-YAPFD  146 (212)
T ss_pred             HhcCCCCCCEEEEECC-C-ccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC-c-CCCcC
Confidence            5577889999999983 3 466666666653 589998766553 2    234445432  2222111 111 1 13499


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+....-........+.|++||+++..-
T Consensus       147 ~I~~~~~~~~~~~~l~~~L~~gG~lv~~~  175 (212)
T PRK00312        147 RILVTAAAPEIPRALLEQLKEGGILVAPV  175 (212)
T ss_pred             EEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence            98876554446678889999999987654

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.23  E-value=0.14  Score=42.57  Aligned_cols=73  Identities=19%  Similarity=0.211  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCC--cee---eeCCChhHH-----HHhc--CCccE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGA--EQA---VDYSSKDIE-----LAIK--GKFDA  240 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~--~~v---~~~~~~~~~-----~~i~--g~~D~  240 (364)
                      .+.++|.|+++++|.+.+|.+...|++|.+...+..  ++.+..++.  +|.   .|.++.+..     +..+  |.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            356799999999999999999999999999865443  355677775  331   233333222     2222  67999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +++|.|-
T Consensus        94 lVncAGI  100 (256)
T KOG1200|consen   94 LVNCAGI  100 (256)
T ss_pred             EEEcCcc
Confidence            9999995

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.22  E-value=0.11  Score=45.72  Aligned_cols=74  Identities=27%  Similarity=0.476  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|.|+++.+|..+++.+...|++|+.+.++.+.  ..   +++.+.. ..  .|..+.+ +   .+.+.   +++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999888899999999887542  22   2333422 12  2333332 2   22222   558


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |.+|.+.|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.12  Score=46.18  Aligned_cols=36  Identities=17%  Similarity=0.402  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~  209 (364)
                      .+++++|+||+|.+|...++.+...|++|+++.++.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~   40 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTA   40 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence            457899999999999999999988999999988754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.20  E-value=0.12  Score=45.11  Aligned_cols=74  Identities=19%  Similarity=0.314  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-ee--eeCCChh-HH---HHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSKD-IE---LAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~~-~~---~~i~---g~~D~v  241 (364)
                      ++.+++|.|++|.+|..+++.+...|+.|+...++.+.  +....++.. .+  .|..+.+ +.   +.+.   +++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999999999999999998899988877665443  233333322 12  2333322 21   2221   459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999884

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=95.18  E-value=0.13  Score=48.04  Aligned_cols=93  Identities=24%  Similarity=0.254  Sum_probs=64.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcC---Cc-eeeeCCCh-hHHHHhcCCccEEEECCCCc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAG---AE-QAVDYSSK-DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g---~~-~v~~~~~~-~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+|||.| +|.+|+.+++.+...+ .+|+..+++.+. ..+....   .. ..+|-.+. .+.+.+.+ .|+||+|.+..
T Consensus         2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~-~d~VIn~~p~~   79 (389)
T COG1748           2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKD-FDLVINAAPPF   79 (389)
T ss_pred             CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhc-CCEEEEeCCch
Confidence            4789999 6999999999987777 799999988654 4443332   21 24455444 45566667 89999999987


Q ss_pred             hhHHHHHhhccCCCEEEEEccC
Q 017901          249 ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      -....+-.|++.|=.++.....
T Consensus        80 ~~~~i~ka~i~~gv~yvDts~~  101 (389)
T COG1748          80 VDLTILKACIKTGVDYVDTSYY  101 (389)
T ss_pred             hhHHHHHHHHHhCCCEEEcccC
Confidence            4444444566666666666543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.17  E-value=0.11  Score=45.64  Aligned_cols=97  Identities=16%  Similarity=0.158  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HH-cCCcee-eeCCC--hhHHHHh-cCCccEEEECC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LA-AGAEQA-VDYSS--KDIELAI-KGKFDAVLDTI  245 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~-~g~~~v-~~~~~--~~~~~~i-~g~~D~vid~~  245 (364)
                      ..+.+++|+||+|.+|..+++.+...|.+|+++.++.+. ... .. .++..+ .|..+  .++.+.+ .+ +|+||.+.
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~-~d~vi~~~   93 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDD-SDAVICAT   93 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcC-CCEEEECC
Confidence            446789999999999999999998889999999887654 211 11 122211 24433  2455555 35 99999987


Q ss_pred             CCch-------------hHHHHHhhccC--CCEEEEEccC
Q 017901          246 GAPE-------------TERLGLNFLKR--GGHYMTLHGE  270 (364)
Q Consensus       246 g~~~-------------~~~~~~~~l~~--~G~~v~~g~~  270 (364)
                      |...             .....++.++.  .+++|.++..
T Consensus        94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            7421             12344444443  3588887754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.17  E-value=0.1  Score=45.79  Aligned_cols=71  Identities=20%  Similarity=0.252  Sum_probs=47.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCce-e--eeCCCh-hHH---HHhc---CCccEEEEC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQ-A--VDYSSK-DIE---LAIK---GKFDAVLDT  244 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~~-v--~~~~~~-~~~---~~i~---g~~D~vid~  244 (364)
                      +++|.|++|.+|...+..+...|++|+.+.++.+. . ....++... .  .|..+. ++.   +.+.   +++|+++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999887653 2 233344321 1  233332 222   2221   349999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            874

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.11  Score=45.62  Aligned_cols=74  Identities=24%  Similarity=0.395  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-eee--eCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QAV--DYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v~--~~~~~~-~---~~~i~---g~~  238 (364)
                      .+.+++|+|++|.+|..+++.+...|++|+.+.++.+.  ..   +.+.+.. ..+  |..+.+ .   .+.+.   +++
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999876542  22   2223322 122  333322 2   22222   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |+++.+.|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.13  E-value=0.092  Score=48.78  Aligned_cols=85  Identities=19%  Similarity=0.145  Sum_probs=54.6

Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH----HHcC------Ccee-eeCC
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV----LAAG------AEQA-VDYS  226 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~----~~~g------~~~v-~~~~  226 (364)
                      +|||.-|+.+..+ .+++|+|+||+|-+|..++..+...|.+|+++.+....  ...    ...+      ...+ .|..
T Consensus         1 ~~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~   79 (348)
T PRK15181          1 MTAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIR   79 (348)
T ss_pred             Cchhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCC
Confidence            3678776444444 44789999999999999999999999999999764321  111    1111      1111 1333


Q ss_pred             Ch-hHHHHhcCCccEEEECCC
Q 017901          227 SK-DIELAIKGKFDAVLDTIG  246 (364)
Q Consensus       227 ~~-~~~~~i~g~~D~vid~~g  246 (364)
                      +. .+...+.+ +|+||.+.+
T Consensus        80 d~~~l~~~~~~-~d~ViHlAa   99 (348)
T PRK15181         80 KFTDCQKACKN-VDYVLHQAA   99 (348)
T ss_pred             CHHHHHHHhhC-CCEEEECcc
Confidence            32 33344446 999999876

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.13  Score=44.44  Aligned_cols=70  Identities=14%  Similarity=0.189  Sum_probs=47.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCChh-HHH---HhcCCccEEEECCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSKD-IEL---AIKGKFDAVLDTIG  246 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~~-~~~---~i~g~~D~vid~~g  246 (364)
                      +++|+||++++|...++.+...|++|+.+.++++.  +...+++... ..|..+.+ +.+   .+.+++|+++.+.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            58999999999999999998899999999876554  2334444432 23444432 222   22224899999865

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.14  Score=44.14  Aligned_cols=72  Identities=25%  Similarity=0.310  Sum_probs=49.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc-eeeeCCChhH-HH---Hhc-CCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKDI-EL---AIK-GKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~-~~---~i~-g~~D~vid~~g~  247 (364)
                      ++++|+|++|.+|..+++.+...|++|+.+.++.+. +.+...+.. ...|..+.+. ..   .+. +++|++|.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            468999999999999999888889999999876553 444444443 2234444322 22   222 348999998875

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.11  Score=46.32  Aligned_cols=73  Identities=16%  Similarity=0.260  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc---ee--eeCCChh-HHH--Hhc---CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QA--VDYSSKD-IEL--AIK---GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~---~v--~~~~~~~-~~~--~i~---g~~  238 (364)
                      +.+++|+||+|.+|...+..+...|++|+++.++.+. +.    ....+.+   ++  .|..+.+ +..  .+.   +++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            5689999999999999999998999999999876543 22    2222221   12  2443332 221  111   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |+++.|.|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999999875

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.13  E-value=0.051  Score=48.23  Aligned_cols=72  Identities=24%  Similarity=0.390  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCCh-hH---HHHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DI---ELAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~---~~~i~---g~~D~vid~~  245 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++.....  ..... ...|..+. ++   .+.+.   +++|++|.+.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A   85 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNA   85 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4678999999999999999999999999998876554311  01111 12233333 22   22221   5599999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        86 g~   87 (266)
T PRK06171         86 GI   87 (266)
T ss_pred             cc
Confidence            84

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.12  E-value=0.14  Score=45.82  Aligned_cols=74  Identities=27%  Similarity=0.412  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+|++|++|..+++.+...|++|+.+.++++.  ..   +.+.+.. ..  .|..+.+ .   .+.+.   +++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999998876542  22   2223322 11  2333322 2   22221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (278)
T PRK08277         89 DILINGAGG   97 (278)
T ss_pred             CEEEECCCC
Confidence            999999883

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.11  E-value=0.2  Score=49.29  Aligned_cols=88  Identities=19%  Similarity=0.134  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|+++.|.| .|.+|...++.++.+|.+|++..+....+...+.|+..+      ++.+.+.. .|+|+-++.....   
T Consensus       139 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~------~l~ell~~-aDiV~l~lP~t~~t~~  210 (526)
T PRK13581        139 YGKTLGIIG-LGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELV------SLDELLAR-ADFITLHTPLTPETRG  210 (526)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEE------cHHHHHhh-CCEEEEccCCChHhhc
Confidence            478999999 899999999999999999999876544444455565422      23334444 8999998886422   


Q ss_pred             -H-HHHHhhccCCCEEEEEcc
Q 017901          251 -E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~  269 (364)
                       + ...+..|+++..+|.++-
T Consensus       211 li~~~~l~~mk~ga~lIN~aR  231 (526)
T PRK13581        211 LIGAEELAKMKPGVRIINCAR  231 (526)
T ss_pred             CcCHHHHhcCCCCeEEEECCC
Confidence             2 456788899988887763

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.11  E-value=0.22  Score=42.88  Aligned_cols=92  Identities=26%  Similarity=0.381  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH----HcCCceeeeCCChhHHHHhc--CCccEEEE--
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL----AAGAEQAVDYSSKDIELAIK--GKFDAVLD--  243 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~----~~g~~~v~~~~~~~~~~~i~--g~~D~vid--  243 (364)
                      -+|.+||=.|++|  |++..-+|+ .|++|+++.-+++. +.++    +-|..  ++|......+...  ++||+|+.  
T Consensus        58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmE  132 (243)
T COG2227          58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCME  132 (243)
T ss_pred             CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhh
Confidence            4788999999554  566666665 48999999777664 4433    33332  5566554444333  46999876  


Q ss_pred             ---CCCCch-hHHHHHhhccCCCEEEEEcc
Q 017901          244 ---TIGAPE-TERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       244 ---~~g~~~-~~~~~~~~l~~~G~~v~~g~  269 (364)
                         -+..+. .+..+.++++|+|.++.--.
T Consensus       133 VlEHv~dp~~~~~~c~~lvkP~G~lf~STi  162 (243)
T COG2227         133 VLEHVPDPESFLRACAKLVKPGGILFLSTI  162 (243)
T ss_pred             HHHccCCHHHHHHHHHHHcCCCcEEEEecc
Confidence               466553 57789999999999876643

>PRK07574 formate dehydrogenase; Provisional

Probab=95.08  E-value=0.24  Score=46.46  Aligned_cols=89  Identities=16%  Similarity=0.118  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~-  251 (364)
                      .|.+|.|.| .|.+|..+++.++.+|.+|++..+... .+.....|....     .++.+.+.. .|+|+-++...... 
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~-aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH-----VSFDSLVSV-CDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec-----CCHHHHhhc-CCEEEEcCCCCHHHH
Confidence            568899999 899999999999999999999877653 233344553211     134444445 89999988854322 


Q ss_pred             ----HHHHhhccCCCEEEEEcc
Q 017901          252 ----RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ----~~~~~~l~~~G~~v~~g~  269 (364)
                          ...+..|+++..+|.++-
T Consensus       264 ~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECCC
Confidence                356788999988887763

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.08  E-value=0.1  Score=42.51  Aligned_cols=73  Identities=22%  Similarity=0.313  Sum_probs=45.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCC--cc-H-HH---HHHcCCce-ee--eCCCh-h---HHHHhc---CC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS--KS-I-DR---VLAAGAEQ-AV--DYSSK-D---IELAIK---GK  237 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~--~~-~-~~---~~~~g~~~-v~--~~~~~-~---~~~~i~---g~  237 (364)
                      ++++|+||++++|...++.+...|+ +|+.+.++  .. . +.   +...+... ++  |..+. +   +.+.+.   ++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4789999999999999999988877 55666666  22 2 22   33344321 22  32332 2   222222   56


Q ss_pred             ccEEEECCCCc
Q 017901          238 FDAVLDTIGAP  248 (364)
Q Consensus       238 ~D~vid~~g~~  248 (364)
                      +|++|.|.|..
T Consensus        81 ld~li~~ag~~   91 (167)
T PF00106_consen   81 LDILINNAGIF   91 (167)
T ss_dssp             ESEEEEECSCT
T ss_pred             ccccccccccc
Confidence            99999998864

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.07  E-value=0.12  Score=45.71  Aligned_cols=35  Identities=31%  Similarity=0.448  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .+++++|+||++++|..++..+...|++|+.+.++
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~   41 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS   41 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            57899999999999999999999999999887553

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.14  Score=45.58  Aligned_cols=37  Identities=27%  Similarity=0.377  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      .+++++|+|++|.+|..+++.+...|++|+.+.++.+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~   42 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPD   42 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            3679999999999999999999999999999987654

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.14  Score=45.59  Aligned_cols=72  Identities=19%  Similarity=0.291  Sum_probs=48.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCc-e--eeeCCChh-HHH---Hhc---CCccEEEE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAE-Q--AVDYSSKD-IEL---AIK---GKFDAVLD  243 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~-~--v~~~~~~~-~~~---~i~---g~~D~vid  243 (364)
                      +++||+||+|.+|..+++.+...|.+|+++.++.+. +.+. ..+.. .  ..|..+.+ +..   .+.   +++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            579999999999999999998899999999887653 3332 22221 1  22333332 221   111   44899999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9874

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.04  E-value=0.12  Score=40.02  Aligned_cols=90  Identities=19%  Similarity=0.221  Sum_probs=55.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCcc-H--HHHHHcC----Cc-eeeeCCChhHHHHhcCCccEEEECCCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-I--DRVLAAG----AE-QAVDYSSKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~-~--~~~~~~g----~~-~v~~~~~~~~~~~i~g~~D~vid~~g~  247 (364)
                      +|.|.|++|.+|..+++++..+- ++++.+..++. .  .+.....    .. ..+...   ..+.+.+ +|+||.|++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDA---DPEELSD-VDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEET---SGHHHTT-ESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeec---chhHhhc-CCEEEecCch
Confidence            58899999999999999998764 46666644333 2  2222211    11 112111   1122234 9999999999


Q ss_pred             chhHHHHHhhccCCCEEEEEccC
Q 017901          248 PETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       248 ~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .......-.+++.|-++|..+..
T Consensus        77 ~~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   77 GASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             HHHHHHHHHHHHTTSEEEESSST
T ss_pred             hHHHHHHHHHhhCCcEEEeCCHH
Confidence            84555555566777788888754

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.03  E-value=0.46  Score=37.00  Aligned_cols=90  Identities=16%  Similarity=0.213  Sum_probs=60.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCcc---H-HHHHHcCCceeeeCCCh---hHHHHh--------------
Q 017901          178 LLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS---I-DRVLAAGAEQAVDYSSK---DIELAI--------------  234 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~---~-~~~~~~g~~~v~~~~~~---~~~~~i--------------  234 (364)
                      |.|.|++|.+|.-+.++.+.+.  ++|++.+-..+   . +.++++.+..+.-.+..   .+.+..              
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            5789999999999999999997  68888854333   2 55788887766544432   122211              


Q ss_pred             ------c-CCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901          235 ------K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       235 ------~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~  267 (364)
                            . .++|+++.++-+...+.-.+.+++.|=++.+.
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA  120 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA  120 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence                  1 24999999888777888888888877666544

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.01  E-value=0.13  Score=45.28  Aligned_cols=74  Identities=24%  Similarity=0.382  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc-e--eeeCCChh-HH---HHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-Q--AVDYSSKD-IE---LAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~-~--v~~~~~~~-~~---~~i~---g~~  238 (364)
                      .+.+++|+|++|.+|..+++.+...|++|+.+.++.+. +.    +...+.. .  ..|..+.+ +.   +.+.   +++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999998876543 22    2233322 1  22333332 21   2221   448


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |.+|.+.|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.99  E-value=0.13  Score=44.79  Aligned_cols=74  Identities=24%  Similarity=0.378  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCCh-hHHHHhc------CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSK-DIELAIK------GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~-~~~~~i~------g~~  238 (364)
                      .+.+++|.|++|.+|..++..+...|++|+.+.++...  +.   +...+... +  .|..+. ++...+.      +++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            35789999999999999999988899999999887543  22   22223221 1  233332 2222221      349


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999999875

>PLN00016 RNA-binding protein; Provisional

Probab=94.97  E-value=0.18  Score=47.47  Aligned_cols=95  Identities=23%  Similarity=0.373  Sum_probs=62.1

Q ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-----------HHHHcCCceeeeCCChhHHHHhc--
Q 017901          174 EGQRLLVL----GGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-----------RVLAAGAEQAVDYSSKDIELAIK--  235 (364)
Q Consensus       174 ~g~~vli~----g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-----------~~~~~g~~~v~~~~~~~~~~~i~--  235 (364)
                      ...+|||+    ||+|.+|..+++.+...|.+|++++++... .           .+...+... +..+-.++...+.  
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~d~~~~~~~~  129 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKT-VWGDPADVKSKVAGA  129 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceE-EEecHHHHHhhhccC
Confidence            34679999    999999999999999999999999887542 1           112234432 2222223333333  


Q ss_pred             CCccEEEECCCCc-hhHHHHHhhccCCC--EEEEEccC
Q 017901          236 GKFDAVLDTIGAP-ETERLGLNFLKRGG--HYMTLHGE  270 (364)
Q Consensus       236 g~~D~vid~~g~~-~~~~~~~~~l~~~G--~~v~~g~~  270 (364)
                      + +|+||++.+.. ......++.++..|  ++|.++..
T Consensus       130 ~-~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        130 G-FDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             C-ccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            4 99999998754 23455566665443  78877753

>PRK08264 short chain dehydrogenase; Validated

Probab=94.97  E-value=0.12  Score=45.00  Aligned_cols=72  Identities=21%  Similarity=0.305  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccHHHHHHcCCc-ee--eeCCCh-hHHHHhc--CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRVLAAGAE-QA--VDYSSK-DIELAIK--GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~~~~~~~g~~-~v--~~~~~~-~~~~~i~--g~~D~vid~~g  246 (364)
                      .+.+++|+||+|.+|..+++.+...|+ +|+++.++.+....  .+.. .+  .|..+. ++...+.  +++|++|.+.|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            467899999999999999999999999 99888876554211  2221 12  233332 2222222  34899999998


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        83 ~   83 (238)
T PRK08264         83 I   83 (238)
T ss_pred             c
Confidence            7

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.94  E-value=0.16  Score=44.68  Aligned_cols=36  Identities=22%  Similarity=0.275  Sum_probs=31.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +++++|+|++|.+|..+++.+...|++|+.+.++..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~   37 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSE   37 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            568999999999999999999889999999887654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=94.92  E-value=0.16  Score=46.03  Aligned_cols=73  Identities=23%  Similarity=0.361  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH----HHHHHcCC-c---eee--eCCC-hhHHHHhcCCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----DRVLAAGA-E---QAV--DYSS-KDIELAIKGKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~~~~g~-~---~v~--~~~~-~~~~~~i~g~~D~vi  242 (364)
                      .+.+|+|+||+|-+|...+..+...|++|.+++|+.+.    +.++++.. .   .++  |-.+ .++.+.+.| +|.||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g-cdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG-CDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhC-CCEEE
Confidence            57899999999999999999999999999999987653    24555552 2   122  2222 356777778 99999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      -+...
T Consensus        84 H~Asp   88 (327)
T KOG1502|consen   84 HTASP   88 (327)
T ss_pred             EeCcc
Confidence            87653

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=94.92  E-value=0.19  Score=45.76  Aligned_cols=90  Identities=19%  Similarity=0.175  Sum_probs=61.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      .+|.|.| .|.+|...+..++..|.  +|++..++++. +.+.+.|......   .+..+.+.+ +|+||.|+....   
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~~~-aDvViiavp~~~~~~   81 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAVKG-ADLVILCVPVGASGA   81 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHhcC-CCEEEECCCHHHHHH
Confidence            5799999 89999999999888885  78877776554 6666777532111   122333445 999999999752   


Q ss_pred             hHHHHHhhccCCCEEEEEccC
Q 017901          250 TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+......++++..++.+|..
T Consensus        82 v~~~l~~~l~~~~iv~dvgs~  102 (307)
T PRK07502         82 VAAEIAPHLKPGAIVTDVGSV  102 (307)
T ss_pred             HHHHHHhhCCCCCEEEeCccc
Confidence            233444567788877777653

>TIGR00438 rrmJ cell division protein FtsJ

Probab=94.91  E-value=0.36  Score=40.42  Aligned_cols=96  Identities=17%  Similarity=0.170  Sum_probs=56.2

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHc-C-CeEEEeeCCccHHHHHHcCCcee-eeCCChhHHHH----hc-CCccE
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-G-CHVSATCGSKSIDRVLAAGAEQA-VDYSSKDIELA----IK-GKFDA  240 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g-~~vi~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~----i~-g~~D~  240 (364)
                      ...+++|++||..| +|.-++ +..+++.. + .+|+++..++..   ...+...+ .|..+....+.    .. +++|+
T Consensus        27 ~~~i~~g~~VLDiG-~GtG~~-~~~l~~~~~~~~~v~~vDis~~~---~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~  101 (188)
T TIGR00438        27 FKLIKPGDTVLDLG-AAPGGW-SQVAVEQVGGKGRVIAVDLQPMK---PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV  101 (188)
T ss_pred             hcccCCCCEEEEec-CCCCHH-HHHHHHHhCCCceEEEEeccccc---cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence            34568999999999 555454 44444443 3 479999666543   11233211 13322222221    22 34999


Q ss_pred             EEE-C----CCC------------chhHHHHHhhccCCCEEEEEcc
Q 017901          241 VLD-T----IGA------------PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       241 vid-~----~g~------------~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+. .    .|.            ...+..+.++|++||+++....
T Consensus       102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~  147 (188)
T TIGR00438       102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF  147 (188)
T ss_pred             EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence            995 2    222            2367788999999999998653

>PRK07069 short chain dehydrogenase; Validated

Probab=94.91  E-value=0.31  Score=42.58  Aligned_cols=31  Identities=23%  Similarity=0.262  Sum_probs=28.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      ++|+|++|.+|...++.+...|++|+.+.++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~   32 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN   32 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            7999999999999999998899999999876

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.89  E-value=0.18  Score=40.97  Aligned_cols=87  Identities=9%  Similarity=0.145  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhH-HHHhcCCccEEEECCCCchhHH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDI-ELAIKGKFDAVLDTIGAPETER  252 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~i~g~~D~vid~~g~~~~~~  252 (364)
                      .|.+|+|.| +|.+|.--++.+...|++|+.+. ++..+.+.+++.-. +..  ..+ ...+.+ +|+||-+++.+ .++
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs-p~~~~~l~~l~~i~-~~~--~~~~~~dl~~-a~lViaaT~d~-e~N   84 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS-PEICKEMKELPYIT-WKQ--KTFSNDDIKD-AHLIYAATNQH-AVN   84 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc-CccCHHHHhccCcE-EEe--cccChhcCCC-ceEEEECCCCH-HHH
Confidence            578899999 79999999998888999998773 33334444454211 111  111 112335 99999999998 555


Q ss_pred             HHHhhccCCCEEEEE
Q 017901          253 LGLNFLKRGGHYMTL  267 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~  267 (364)
                      ..+...+..+.++..
T Consensus        85 ~~i~~~a~~~~~vn~   99 (157)
T PRK06719         85 MMVKQAAHDFQWVNV   99 (157)
T ss_pred             HHHHHHHHHCCcEEE
Confidence            544444433334443

>PLN03075 nicotianamine synthase; Provisional

Probab=94.89  E-value=0.25  Score=44.36  Aligned_cols=95  Identities=9%  Similarity=0.067  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHHHH-----cCCceeeeCCChhHHHHh--cCCccEEE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRVLA-----AGAEQAVDYSSKDIELAI--KGKFDAVL  242 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~~~-----~g~~~v~~~~~~~~~~~i--~g~~D~vi  242 (364)
                      .++++|+-.| +|+.|+.++-+++.+  +.+++.+..+++. +.+++     .|...-+.....+..+..  .+++|+||
T Consensus       122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF  200 (296)
T PLN03075        122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF  200 (296)
T ss_pred             CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence            3779999999 899999888888655  3478888777654 44433     332222222222222211  13499998


Q ss_pred             ECC------CC-chhHHHHHhhccCCCEEEEEc
Q 017901          243 DTI------GA-PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       243 d~~------g~-~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      -.+      .. ...+....+.|++||.++.-.
T Consensus       201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            874      22 247889999999999998775

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.87  E-value=0.16  Score=44.99  Aligned_cols=74  Identities=20%  Similarity=0.351  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce---eeeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ---AVDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~---v~~~~~~~----~~~~i~---g~~  238 (364)
                      .+++++|+|+++.+|..++..+...|++|+.+.++.+.  +   .+.+.+...   ..|..+.+    +.+.+.   +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            56789999999999999999888899999888776543  2   223334321   12333321    222222   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999885

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.87  E-value=0.24  Score=44.28  Aligned_cols=93  Identities=17%  Similarity=0.156  Sum_probs=58.5

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC---CceeeeCCChhHHHHhcCCccEEEECC
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG---AEQAVDYSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g---~~~v~~~~~~~~~~~i~g~~D~vid~~  245 (364)
                      ....+++++|.| +|++|.+++..+...|++|+.+.++.++  +++.++.   .......     .+.....+|+||+|+
T Consensus       113 ~~~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~~~~~~~~DivInat  186 (270)
T TIGR00507       113 PLRPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM-----DELPLHRVDLIINAT  186 (270)
T ss_pred             CCccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech-----hhhcccCccEEEECC
Confidence            345578999999 5899999999888889988888776543  3333332   2122211     111112389999999


Q ss_pred             CCc--hhH---HHHHhhccCCCEEEEEcc
Q 017901          246 GAP--ETE---RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       246 g~~--~~~---~~~~~~l~~~G~~v~~g~  269 (364)
                      +..  ...   ......++++..++.+..
T Consensus       187 p~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       187 SAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            864  111   112456778877777753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK09135 pteridine reductase; Provisional

Probab=94.86  E-value=0.22  Score=43.39  Aligned_cols=36  Identities=22%  Similarity=0.305  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~  209 (364)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~   40 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS   40 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence            457899999999999999999988999999998753

>PLN03139 formate dehydrogenase; Provisional

Probab=94.85  E-value=0.25  Score=46.32  Aligned_cols=89  Identities=18%  Similarity=0.198  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~-  251 (364)
                      .|++|.|.| .|.+|...++.++.+|.+|++..+... .+...+.|+..+     .++.+.+.. .|+|+-++...... 
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~-sDvV~l~lPlt~~T~  270 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPK-CDVVVINTPLTEKTR  270 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhh-CCEEEEeCCCCHHHH
Confidence            578999999 899999999999999999988766543 234445554321     134444444 89999888854222 


Q ss_pred             ----HHHHhhccCCCEEEEEcc
Q 017901          252 ----RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ----~~~~~~l~~~G~~v~~g~  269 (364)
                          ...+..|+++..+|.++-
T Consensus       271 ~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        271 GMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             HHhCHHHHhhCCCCeEEEECCC
Confidence                356788899988888773

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.84  E-value=0.1  Score=52.65  Aligned_cols=73  Identities=16%  Similarity=0.271  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc----------------------HHHHHHcCCceeeeCCC---h
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS----------------------IDRVLAAGAEQAVDYSS---K  228 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~----------------------~~~~~~~g~~~v~~~~~---~  228 (364)
                      .+++|+|.| +|+.|+.++..++..|.+|+.+.+.+.                      .+.+.++|++..++...   .
T Consensus       309 ~~kkVaIIG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            489999999 899999999999999999888765432                      24567788776555421   1


Q ss_pred             hHHHHhcCCccEEEECCCCc
Q 017901          229 DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~  248 (364)
                      ++.+...+ +|.||.++|..
T Consensus       388 ~~~~l~~~-~DaV~latGa~  406 (639)
T PRK12809        388 TFSDLTSE-YDAVFIGVGTY  406 (639)
T ss_pred             CHHHHHhc-CCEEEEeCCCC
Confidence            23222235 99999999975

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.83  E-value=0.16  Score=44.39  Aligned_cols=39  Identities=21%  Similarity=0.281  Sum_probs=34.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ..++.+++|.|++|.+|..+++.+...|++|+++.++..
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~   47 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEE   47 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHH
Confidence            457889999999999999999999889999999987654

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.81  E-value=0.12  Score=45.03  Aligned_cols=38  Identities=18%  Similarity=0.255  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      .+++++|+|++|++|..+++.+...|++|+.+.+++..
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~   42 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKK   42 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHH
Confidence            45789999999999999999999999999999887653

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.16  Score=44.36  Aligned_cols=36  Identities=17%  Similarity=0.286  Sum_probs=31.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +++++|+|++|++|...++.+...|++|+.+.++..
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~   37 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTD   37 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            468999999999999999988888999999887654

>PRK11579 putative oxidoreductase; Provisional

Probab=94.80  E-value=1.2  Score=41.34  Aligned_cols=136  Identities=14%  Similarity=0.047  Sum_probs=78.9

Q ss_pred             CEEEEEcCCchHHH-HHHH-HHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHH
Q 017901          176 QRLLVLGGGGAVGF-AAVQ-FSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETER  252 (364)
Q Consensus       176 ~~vli~g~~g~~G~-~~~~-~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~  252 (364)
                      -++.|.| .|.+|. .... +.+.-++++.++++........+.+...++    .++.+.+. ..+|+|+.|+.......
T Consensus         5 irvgiiG-~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~ell~~~~vD~V~I~tp~~~H~~   79 (346)
T PRK11579          5 IRVGLIG-YGYASKTFHAPLIAGTPGLELAAVSSSDATKVKADWPTVTVV----SEPQHLFNDPNIDLIVIPTPNDTHFP   79 (346)
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHHhhCCCCcee----CCHHHHhcCCCCCEEEEcCCcHHHHH
Confidence            3689999 788886 3444 344457899999776543322333222222    23444443 23999999999887788


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      .+..+++.|= =|++-.+..              .+......-......+++.+.-.+..+....+..+.+++++|.|-
T Consensus        80 ~~~~al~aGk-hVl~EKPla--------------~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~iG  143 (346)
T PRK11579         80 LAKAALEAGK-HVVVDKPFT--------------VTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVLG  143 (346)
T ss_pred             HHHHHHHCCC-eEEEeCCCC--------------CCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCCC
Confidence            8888887764 456665411              001111111112233455554444343456788888999998764

>PLN02780 ketoreductase/ oxidoreductase

Probab=94.80  E-value=0.12  Score=47.42  Aligned_cols=38  Identities=16%  Similarity=0.116  Sum_probs=34.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      .|++++|+||++++|...++.+...|++|+.+.++++.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~   89 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDK   89 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence            58899999999999999999888899999999887653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=94.79  E-value=0.043  Score=49.27  Aligned_cols=66  Identities=26%  Similarity=0.321  Sum_probs=45.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCC
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~  247 (364)
                      |||+||+|.+|..+++.+...|.+|+++.++... ......+   +.+.........+.+ +|+||.+.+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEG-ADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccchhhhcCC-CCEEEECCCC
Confidence            6899999999999999998899999999886553 2111111   111112233344446 9999999975

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.78  E-value=0.42  Score=41.90  Aligned_cols=33  Identities=24%  Similarity=0.325  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~  206 (364)
                      .+++++|+|+++++|..+++.+...|++|+...
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~   35 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY   35 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence            467999999999999999999999999988764

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=94.77  E-value=0.26  Score=45.18  Aligned_cols=87  Identities=13%  Similarity=0.103  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~-~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~-  251 (364)
                      .|+++.|.| .|.+|...++.++ .+|.+|++..+....+.....+...      .++.+.+.. .|+|+-++.-.+.. 
T Consensus       144 ~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~------~~l~ell~~-sDvv~lh~plt~~T~  215 (323)
T PRK15409        144 HHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARY------CDLDTLLQE-SDFVCIILPLTDETH  215 (323)
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEe------cCHHHHHHh-CCEEEEeCCCChHHh
Confidence            578999999 8999999999998 8999999876553333333444321      134444444 89988877753221 


Q ss_pred             ----HHHHhhccCCCEEEEEc
Q 017901          252 ----RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       252 ----~~~~~~l~~~G~~v~~g  268 (364)
                          ...+..|+++..+|.++
T Consensus       216 ~li~~~~l~~mk~ga~lIN~a  236 (323)
T PRK15409        216 HLFGAEQFAKMKSSAIFINAG  236 (323)
T ss_pred             hccCHHHHhcCCCCeEEEECC
Confidence                36778899998888776

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=94.76  E-value=0.18  Score=46.03  Aligned_cols=73  Identities=19%  Similarity=0.303  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHHHcCC---c-ee--eeCCChh----HHHHhc---CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGA---E-QA--VDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~~~g~---~-~v--~~~~~~~----~~~~i~---g~~  238 (364)
                      +.+++|+|+++++|..+++.+...| ++|+.++++++.  +...+++.   . .+  .|..+.+    +.+.+.   +++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999999888889 899998877653  23333331   1 11  2433322    223322   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999999874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=94.74  E-value=0.22  Score=46.34  Aligned_cols=75  Identities=24%  Similarity=0.317  Sum_probs=48.7

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHcCCeEEEeeCCc---c--------------HHHHHHcCCc-eee--eCCCh--
Q 017901          173 SEGQRLLVLGGGGAVGFA--AVQFSVASGCHVSATCGSK---S--------------IDRVLAAGAE-QAV--DYSSK--  228 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~--~~~~a~~~g~~vi~~~~~~---~--------------~~~~~~~g~~-~v~--~~~~~--  228 (364)
                      ..|+++||+|+++++|++  .++.+ ..|++++++....   +              .+.+.+.|.. ..+  |..+.  
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            456899999999999999  56666 7899988886321   1              1234555643 222  33332  


Q ss_pred             --hHHHHhc---CCccEEEECCCCc
Q 017901          229 --DIELAIK---GKFDAVLDTIGAP  248 (364)
Q Consensus       229 --~~~~~i~---g~~D~vid~~g~~  248 (364)
                        .+.+.+.   |++|+++.+++.+
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence              2223332   6699999999876

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.74  E-value=0.23  Score=43.66  Aligned_cols=73  Identities=25%  Similarity=0.286  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc--ee--eeCCChh-HHHHhc------CCccEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE--QA--VDYSSKD-IELAIK------GKFDAV  241 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~--~v--~~~~~~~-~~~~i~------g~~D~v  241 (364)
                      +++++|+|++|.+|..++..+...|++|+++.++...  ....++...  +.  .|..+.+ +...+.      +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999988899999999876553  223333211  12  2333322 212111      348999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999985

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.73  E-value=0.21  Score=43.69  Aligned_cols=74  Identities=24%  Similarity=0.466  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc-eee--eCCCh-hHHHHh---c---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAV--DYSSK-DIELAI---K---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~-~v~--~~~~~-~~~~~i---~---g~~  238 (364)
                      ++.++||+||+|.+|..+++.+...|++|+.+.++... ..    +.+.+.. .++  |..+. ++...+   .   +++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999998776543 21    2222322 122  33332 222222   1   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        82 d~vi~~ag~   90 (250)
T TIGR03206        82 DVLVNNAGW   90 (250)
T ss_pred             CEEEECCCC
Confidence            999999973

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07023 short chain dehydrogenase; Provisional

Probab=94.71  E-value=0.3  Score=42.61  Aligned_cols=71  Identities=20%  Similarity=0.239  Sum_probs=46.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce---eeeCCChh-HHH---H-h----c--CCccEEE
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ---AVDYSSKD-IEL---A-I----K--GKFDAVL  242 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~---v~~~~~~~-~~~---~-i----~--g~~D~vi  242 (364)
                      +++|+|++|.+|..+++.+...|++|+.+.++.........+...   ..|..+.+ +..   . +    .  ++.|++|
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   82 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLI   82 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence            689999999999999999988999999988765543333333221   22333322 221   1 1    1  2478999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus        83 ~~ag~   87 (243)
T PRK07023         83 NNAGT   87 (243)
T ss_pred             EcCcc
Confidence            98774

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.71  E-value=0.37  Score=43.33  Aligned_cols=96  Identities=18%  Similarity=0.298  Sum_probs=67.9

Q ss_pred             ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHH----cCCeEEEeeCCccHHHHHHcCCceeeeCCC
Q 017901          153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVA----SGCHVSATCGSKSIDRVLAAGAEQAVDYSS  227 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~----~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~  227 (364)
                      +..||+....+..|.. -++ -.|++++|.|.+..+|.=+..++..    .+++|+.+.+.                  +
T Consensus       137 ~~~PcTp~ail~ll~~-y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~------------------t  197 (295)
T PRK14174        137 CFVSCTPYGILELLGR-YNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSA------------------T  197 (295)
T ss_pred             CcCCCCHHHHHHHHHH-hCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCC------------------c
Confidence            3456666666665643 343 4799999999999999988888765    57777765432                  2


Q ss_pred             hhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          228 KDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       228 ~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++.+.++. +|+++-++|.+..  -.-+++++|..+|.+|..
T Consensus       198 ~~l~~~~~~-ADIvI~Avg~~~l--i~~~~vk~GavVIDVgi~  237 (295)
T PRK14174        198 KDIPSYTRQ-ADILIAAIGKARF--ITADMVKPGAVVIDVGIN  237 (295)
T ss_pred             hhHHHHHHh-CCEEEEecCccCc--cCHHHcCCCCEEEEeecc
Confidence            233444444 9999999998833  335677999999999865

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.65  E-value=0.86  Score=39.47  Aligned_cols=90  Identities=16%  Similarity=0.252  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCe---EEEeeCC----ccH---------HHHHHcCCceeeeCCChhHHHHhcC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH---VSATCGS----KSI---------DRVLAAGAEQAVDYSSKDIELAIKG  236 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~---vi~~~~~----~~~---------~~~~~~g~~~v~~~~~~~~~~~i~g  236 (364)
                      -.+.+++|.| +|..|..++..+...|++   ++.+.++    .++         .++++.+... .+   .++.+.+.+
T Consensus        23 l~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~l~~~l~~   97 (226)
T cd05311          23 IEEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GTLKEALKG   97 (226)
T ss_pred             ccCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CCHHHHHhc
Confidence            4567999999 799999999999888985   6666665    221         2334443211 11   245556656


Q ss_pred             CccEEEECCCCchhH-HHHHhhccCCCEEEEEcc
Q 017901          237 KFDAVLDTIGAPETE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       237 ~~D~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~  269 (364)
                       +|++|.+++.. .+ ...++.++++..++....
T Consensus        98 -~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~lsn  129 (226)
T cd05311          98 -ADVFIGVSRPG-VVKKEMIKKMAKDPIVFALAN  129 (226)
T ss_pred             -CCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeCC
Confidence             99999999843 33 467777778777665544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.64  E-value=0.22  Score=45.38  Aligned_cols=74  Identities=24%  Similarity=0.302  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--H-H---HHHHcCCcee---eeCCChh----HHHHh--cCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--I-D---RVLAAGAEQA---VDYSSKD----IELAI--KGKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~-~---~~~~~g~~~v---~~~~~~~----~~~~i--~g~~  238 (364)
                      .+++++|+|+++++|...++.+...|++|+...+...  . +   .++..|....   .|..+.+    +.+.+  .|++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999988865322  1 2   2333343221   1333321    11111  1569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999999885

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.63  E-value=0.19  Score=46.57  Aligned_cols=74  Identities=19%  Similarity=0.169  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC----Cce-eeeCCCh-hHHHHhcC-CccEEEEC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG----AEQ-AVDYSSK-DIELAIKG-KFDAVLDT  244 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g----~~~-v~~~~~~-~~~~~i~g-~~D~vid~  244 (364)
                      .|.++||+||+|.+|..+++.+...|.+|+++.++...  .....++    ... ..|..+. ++.+.+.+ ++|+||.+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            46889999999999999999999999999998765442  2212222    111 1233332 33333332 27999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .+.
T Consensus        83 A~~   85 (349)
T TIGR02622        83 AAQ   85 (349)
T ss_pred             Ccc
Confidence            874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=94.60  E-value=0.31  Score=43.87  Aligned_cols=92  Identities=16%  Similarity=0.164  Sum_probs=55.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCC----ceeeeCCChhHHHHhcCCccEEEECC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGA----EQAVDYSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~----~~v~~~~~~~~~~~i~g~~D~vid~~  245 (364)
                      ..+.+++|.| +|+.|.+++..+...|+ +++.+.++.++  .++..++.    ..+...  .++.+.+.+ +|+||+|+
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~~~~-aDiVInaT  200 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAALAA-ADGLVHAT  200 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhhhCC-CCEEEECC
Confidence            3568899999 79999999999999998 67777776554  33444321    122221  123333445 99999996


Q ss_pred             CCc--h--hHHHHHhhccCCCEEEEEc
Q 017901          246 GAP--E--TERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       246 g~~--~--~~~~~~~~l~~~G~~v~~g  268 (364)
                      ...  .  ........++++..++.+-
T Consensus       201 p~Gm~~~~~~~~~~~~l~~~~~v~Div  227 (284)
T PRK12549        201 PTGMAKHPGLPLPAELLRPGLWVADIV  227 (284)
T ss_pred             cCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence            432  0  1111234566666555554

>PRK09134 short chain dehydrogenase; Provisional

Probab=94.60  E-value=0.3  Score=43.03  Aligned_cols=74  Identities=16%  Similarity=0.194  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH--HH---HHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~  237 (364)
                      .+.+++|+|++|.+|..+++.+...|++|+.+.+.. ..  ..   +...+...   ..|..+.+ +   .+.+.   ++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999988999998876533 22  12   22234321   22333322 1   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        88 iD~vi~~ag~   97 (258)
T PRK09134         88 ITLLVNNASL   97 (258)
T ss_pred             CCEEEECCcC
Confidence            8999999874

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.58  E-value=0.28  Score=43.80  Aligned_cols=74  Identities=22%  Similarity=0.329  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      ...+++|+||+|.+|..+++.+...|++|+++.++...  +.   +...+... .  .|..+.+ +   .+.+.   +++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            34689999999999999999999999999988775432  11   23334321 1  2333322 2   22221   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        89 d~vi~~Ag~   97 (274)
T PRK07775         89 EVLVSGAGD   97 (274)
T ss_pred             CEEEECCCc
Confidence            999999875

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=94.57  E-value=0.22  Score=44.04  Aligned_cols=74  Identities=20%  Similarity=0.297  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-H----HHHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-D----RVLAAGAEQ---AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~----~~~~~g~~~---v~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+||+|.+|..+++.+...|++|+.+.++.. . .    .++..+...   ..|..+.+ +   .+.+.   ++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999888766432 1 1    223334321   22333332 1   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|+++.+.|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=94.56  E-value=0.32  Score=47.82  Aligned_cols=88  Identities=22%  Similarity=0.150  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|+++.|.| .|.+|...++.++.+|.+|++..+....+...++|...+     .++.+.+.. .|+|+-++...+.   
T Consensus       137 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~-----~~l~ell~~-aDvV~l~lPlt~~T~~  209 (525)
T TIGR01327       137 YGKTLGVIG-LGRIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELV-----DDLDELLAR-ADFITVHTPLTPETRG  209 (525)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEc-----CCHHHHHhh-CCEEEEccCCChhhcc
Confidence            568999999 999999999999999999999876433344455564311     123444444 8999988875422   


Q ss_pred             -H-HHHHhhccCCCEEEEEc
Q 017901          251 -E-RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g  268 (364)
                       + ...+..|+++..+|.++
T Consensus       210 li~~~~l~~mk~ga~lIN~a  229 (525)
T TIGR01327       210 LIGAEELAKMKKGVIIVNCA  229 (525)
T ss_pred             CcCHHHHhcCCCCeEEEEcC
Confidence             1 35677888988888776

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.56  E-value=0.29  Score=47.00  Aligned_cols=87  Identities=21%  Similarity=0.218  Sum_probs=60.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---hH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---TE  251 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---~~  251 (364)
                      +|.|.||.|.+|.+.+..++..|.+|++..++.+.  +.+.+.|+. +.    .+..+.+.+ +|+||-|+....   .+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~~----~~~~e~~~~-aDvVIlavp~~~~~~vl   75 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-YA----NDNIDAAKD-ADIVIISVPINVTEDVI   75 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-ec----cCHHHHhcc-CCEEEEecCHHHHHHHH
Confidence            58899878999999999999999999888776554  455666753 11    123333444 899999988652   23


Q ss_pred             HHHHhhccCCCEEEEEcc
Q 017901          252 RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~  269 (364)
                      ......++++..++.++.
T Consensus        76 ~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         76 KEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             HHHHhhCCCCCEEEEccc
Confidence            344445667777777774

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.55  E-value=0.21  Score=43.88  Aligned_cols=74  Identities=18%  Similarity=0.325  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce---eeeCCChh-HHH---Hhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ---AVDYSSKD-IEL---AIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~---v~~~~~~~-~~~---~i~---g~~  238 (364)
                      .+++++|.|+++.+|..+++.+...|++++.+.++.+. + .   +++.+...   ..|..+.+ ..+   .+.   +++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999988776543 2 1   22333321   23444332 222   111   458


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |+++.+.|.
T Consensus        90 d~li~~ag~   98 (255)
T PRK06113         90 DILVNNAGG   98 (255)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.53  E-value=0.23  Score=44.87  Aligned_cols=97  Identities=19%  Similarity=0.283  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--H-H---HHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--I-D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~-~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .+.+++|+|++|.+|..+++.+...|++|+.+.++..  . .   .+...+... +  .|..+.+ +   .+.+.   ++
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4688999999999999999999889999998876542  1 1   122333321 1  2333322 1   22221   45


Q ss_pred             ccEEEECCCCch---h-----------------------HHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE---T-----------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~---~-----------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|.+.|...   .                       +..+.+.++++|++|.++..
T Consensus       125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~  183 (290)
T PRK06701        125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI  183 (290)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence            899999887420   0                       12334555677899988754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.52  E-value=0.24  Score=43.31  Aligned_cols=74  Identities=20%  Similarity=0.346  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH--H---HHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI--D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~--~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      ++.+++|+||+|.+|..+++.+...|++|+.+ .++...  +   .+++.+... .  .|..+.+ .   .+.+.   ++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999998775 444432  2   223334321 2  2333322 2   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK07402 precorrin-6B methylase; Provisional

Probab=94.51  E-value=1  Score=37.90  Aligned_cols=102  Identities=16%  Similarity=0.174  Sum_probs=60.8

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HH----HHHcCCce--eeeCCChhHHHHhcCC
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DR----VLAAGAEQ--AVDYSSKDIELAIKGK  237 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~----~~~~g~~~--v~~~~~~~~~~~i~g~  237 (364)
                      +.....++++++|+=.|+  +.|..++.+++.. +.+|+++..+++. +.    +.+++.+.  ++..+..+..+.+...
T Consensus        32 l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~  109 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPA  109 (196)
T ss_pred             HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCC
Confidence            335567788898888773  3566666777654 5799999776653 33    34455432  3332222222222222


Q ss_pred             ccE-EEECCCC-chhHHHHHhhccCCCEEEEEcc
Q 017901          238 FDA-VLDTIGA-PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|. +++.... ...+..+.+.|++||+++....
T Consensus       110 ~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        110 PDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             CCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence            455 4443222 2467899999999999988854

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.50  E-value=0.33  Score=42.15  Aligned_cols=74  Identities=28%  Similarity=0.368  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HH---HHHcCCce-ee--eCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DR---VLAAGAEQ-AV--DYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~---~~~~g~~~-v~--~~~~~~-~---~~~i~---g~  237 (364)
                      .+.+++|+|++|.+|..++..+...|++|+.+.++...   ..   +...+... .+  |..+.+ +   .+.+.   ++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999777654431   11   22233221 22  333332 2   12221   34


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|.+|.+.|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999999875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.48  E-value=0.3  Score=41.23  Aligned_cols=75  Identities=21%  Similarity=0.365  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-eeeeCCCh----hHHHHhc----CCccEE
Q 017901          174 EGQRLLVLGG-GGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QAVDYSSK----DIELAIK----GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~-~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v~~~~~~----~~~~~i~----g~~D~v  241 (364)
                      ..+.|+|.|+ .|++|.+++.-....|+.|+++.|.-+.  ++..+.|.. .=+|.+++    .+..+++    |+.|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            3467888875 7899999998888899999999887664  555577743 22344333    2333443    779999


Q ss_pred             EECCCCc
Q 017901          242 LDTIGAP  248 (364)
Q Consensus       242 id~~g~~  248 (364)
                      ++..|.+
T Consensus        86 ~NNAG~~   92 (289)
T KOG1209|consen   86 YNNAGQS   92 (289)
T ss_pred             EcCCCCC
Confidence            9988864

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=94.47  E-value=0.16  Score=45.73  Aligned_cols=73  Identities=19%  Similarity=0.119  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCce-eeeCCC-hhHHHHhcCCccEEEECCCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQ-AVDYSS-KDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~-v~~~~~-~~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+++++|.| +|+.+.+++..+..+|+ +++.+.|+.++  +++.+++... +..... .++...+.. +|+||+|++..
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~-~DiVInaTp~g  201 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKA-AEVLVSTVPAD  201 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccC-CCEEEECCCCC
Confidence            578899999 79999999999999998 57777777554  4445443211 111111 122223334 99999998864

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.45  E-value=0.11  Score=46.65  Aligned_cols=56  Identities=18%  Similarity=0.179  Sum_probs=47.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC----CccHHHHHHcCCceee
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG----SKSIDRVLAAGAEQAV  223 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~----~~~~~~~~~~g~~~v~  223 (364)
                      ..+.+.||.++||-..+|..|...+.++...|+++|++..    .++...++.+|+.-+.
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            5578999999999999999999999999999999998843    2334778999987554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.45  E-value=0.21  Score=45.66  Aligned_cols=73  Identities=29%  Similarity=0.361  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH---H-cCC--c-eee--eCCCh-hHHHHhcCCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL---A-AGA--E-QAV--DYSSK-DIELAIKGKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~---~-~g~--~-~v~--~~~~~-~~~~~i~g~~D~vi  242 (364)
                      .|++|+|+||+|.+|..+++.+...|.+|+++.++... +...   . .+.  . ..+  |..+. .+.+.+.+ +|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG-CDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC-CCEEE
Confidence            47899999999999999999988899999988776542 2211   1 111  1 122  22222 34444556 99999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.+.
T Consensus        83 h~A~~   87 (322)
T PLN02986         83 HTASP   87 (322)
T ss_pred             EeCCC
Confidence            98873

>PRK14967 putative methyltransferase; Provisional

Probab=94.41  E-value=0.52  Score=40.74  Aligned_cols=94  Identities=27%  Similarity=0.317  Sum_probs=59.5

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HH----HHHcCCc-eeeeCCChhHHHHhc-CCccE
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DR----VLAAGAE-QAVDYSSKDIELAIK-GKFDA  240 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~----~~~~g~~-~v~~~~~~~~~~~i~-g~~D~  240 (364)
                      ...++++++||-.| +|. |..+..+++. ++ +|+++..++.. +.    +...+.. .+++.   ++.+... +++|+
T Consensus        31 ~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~---d~~~~~~~~~fD~  104 (223)
T PRK14967         31 AEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG---DWARAVEFRPFDV  104 (223)
T ss_pred             hcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC---chhhhccCCCeeE
Confidence            34578889999999 565 8888888875 55 89999776653 32    2334432 12222   2222222 34999


Q ss_pred             EEECCCC---------------------------chhHHHHHhhccCCCEEEEEc
Q 017901          241 VLDTIGA---------------------------PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       241 vid~~g~---------------------------~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      |+...+-                           ...+..+.+.|++||+++.+-
T Consensus       105 Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967        105 VVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             EEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            9875321                           012456789999999998764

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.41  E-value=0.52  Score=42.80  Aligned_cols=90  Identities=21%  Similarity=0.207  Sum_probs=64.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch--
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE--  249 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~--  249 (364)
                      -.|++|.|.| .|.+|...++.++..|.+|++..++... +.+...|+. +.     ++.+.+.. .|+|+-++..+.  
T Consensus        14 LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~Eaak~-ADVV~llLPd~~t~   85 (335)
T PRK13403         14 LQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE-VM-----SVSEAVRT-AQVVQMLLPDEQQA   85 (335)
T ss_pred             hCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCE-EC-----CHHHHHhc-CCEEEEeCCChHHH
Confidence            3678999999 9999999999999999999887655332 455666763 21     34445545 999999988642  


Q ss_pred             -hH-HHHHhhccCCCEEEEEccC
Q 017901          250 -TE-RLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~~  270 (364)
                       .+ ...+..|+++..+++..+.
T Consensus        86 ~V~~~eil~~MK~GaiL~f~hgf  108 (335)
T PRK13403         86 HVYKAEVEENLREGQMLLFSHGF  108 (335)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCc
Confidence             22 3467778888877665543

>PRK08317 hypothetical protein; Provisional

Probab=94.39  E-value=0.25  Score=42.81  Aligned_cols=98  Identities=21%  Similarity=0.251  Sum_probs=62.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HHHHHc----CCc-eeeeCCChhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DRVLAA----GAE-QAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~~~~~----g~~-~v~~~~~~~~~~~i~g~~D  239 (364)
                      +...+.++++||-.| +|. |..+..+++..+  .+++++..++.. +.+++.    +.. .+...+..++. ...+.+|
T Consensus        13 ~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D   89 (241)
T PRK08317         13 ELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-FPDGSFD   89 (241)
T ss_pred             HHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-CCCCCce
Confidence            567888999999999 554 889999998873  589999776654 544443    111 11111111110 0113488


Q ss_pred             EEEECC-----CC-chhHHHHHhhccCCCEEEEEc
Q 017901          240 AVLDTI-----GA-PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       240 ~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+...     .. ...+..+.++|++||.++...
T Consensus        90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            887632     22 246789999999999998765

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.22  Score=43.11  Aligned_cols=69  Identities=22%  Similarity=0.263  Sum_probs=46.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCCh-hHHHHhc-----CCccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DIELAIK-----GKFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~~~~i~-----g~~D~vid~~g~  247 (364)
                      +++++|.|++|.+|..+++.+...|++|+++.++....    .... ...|..+. ++.+.+.     .++|++|.+.|.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~   78 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGI   78 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCC
Confidence            57899999999999999999999999999998765431    1111 12333333 2222221     238999999885

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=94.37  E-value=0.21  Score=43.32  Aligned_cols=32  Identities=41%  Similarity=0.622  Sum_probs=29.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~  207 (364)
                      ++++|+|++|.+|..+++.+...|++|+++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r   32 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG   32 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            46899999999999999999999999999877

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.36  E-value=0.2  Score=44.43  Aligned_cols=74  Identities=18%  Similarity=0.340  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCCcc----H-HHHHHcCCcee--eeCCCh-h---HHHHhc---CC
Q 017901          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKS----I-DRVLAAGAEQA--VDYSSK-D---IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~~~----~-~~~~~~g~~~v--~~~~~~-~---~~~~i~---g~  237 (364)
                      .+++++|+||  ++++|.++++.+...|++|+.+.+.++    . +...+++....  .|..+. +   +.+.+.   |+
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999996  579999999999889999988754322    1 22233443222  233332 2   222222   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|+++++.|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999999874

>PLN02256 arogenate dehydrogenase

Probab=94.35  E-value=0.66  Score=42.17  Aligned_cols=95  Identities=21%  Similarity=0.146  Sum_probs=63.8

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~  247 (364)
                      +..+-..+.+|.|.| .|.+|...+..++..|.+|+++.+++..+.+.+.|+..   .+  +..+.+...+|+||-|+..
T Consensus        29 ~~~~~~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~---~~--~~~e~~~~~aDvVilavp~  102 (304)
T PLN02256         29 EELEKSRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSF---FR--DPDDFCEEHPDVVLLCTSI  102 (304)
T ss_pred             HhhccCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHHHHHHHcCCee---eC--CHHHHhhCCCCEEEEecCH
Confidence            334445667899999 89999999999888898999887776545566677632   11  2222222128999999987


Q ss_pred             chhHHHHHh-----hccCCCEEEEEcc
Q 017901          248 PETERLGLN-----FLKRGGHYMTLHG  269 (364)
Q Consensus       248 ~~~~~~~~~-----~l~~~G~~v~~g~  269 (364)
                      . .+...+.     .++++..++.++.
T Consensus       103 ~-~~~~vl~~l~~~~l~~~~iviDv~S  128 (304)
T PLN02256        103 L-STEAVLRSLPLQRLKRSTLFVDVLS  128 (304)
T ss_pred             H-HHHHHHHhhhhhccCCCCEEEecCC
Confidence            6 4443333     3557777777775

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.34  E-value=0.41  Score=43.83  Aligned_cols=89  Identities=19%  Similarity=0.133  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc-hhH
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP-ETE  251 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~-~~~  251 (364)
                      -.|+++.|.| .|.||.+.++.++.+|.+|+...+....+...+.++.++    .  +.+.+.. .|++.-+.+.. ++.
T Consensus       144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~----~--l~ell~~-sDii~l~~Plt~~T~  215 (324)
T COG1052         144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYV----D--LDELLAE-SDIISLHCPLTPETR  215 (324)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceec----c--HHHHHHh-CCEEEEeCCCChHHh
Confidence            3589999999 999999999999999999999987765333344444322    1  3333334 88887766643 222


Q ss_pred             ----HHHHhhccCCCEEEEEcc
Q 017901          252 ----RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ----~~~~~~l~~~G~~v~~g~  269 (364)
                          ...+..|++++.+|.++-
T Consensus       216 hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         216 HLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             hhcCHHHHHhCCCCeEEEECCC
Confidence                467788999999988873

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.32  E-value=0.91  Score=38.50  Aligned_cols=80  Identities=20%  Similarity=0.162  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      -.|.+++|.| .|.+|..+++.+...|++|++..++.+. .. ...+|+. .++.  .++..   .++|+++-|..+...
T Consensus        26 l~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~--~~l~~---~~~Dv~vp~A~~~~I   98 (200)
T cd01075          26 LEGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAP--EEIYS---VDADVFAPCALGGVI   98 (200)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcc--hhhcc---ccCCEEEeccccccc
Confidence            3578999999 7999999999999999999977665543 33 3444543 2222  11111   126777655433323


Q ss_pred             HHHHHhhcc
Q 017901          251 ERLGLNFLK  259 (364)
Q Consensus       251 ~~~~~~~l~  259 (364)
                      ....++.++
T Consensus        99 ~~~~~~~l~  107 (200)
T cd01075          99 NDDTIPQLK  107 (200)
T ss_pred             CHHHHHHcC
Confidence            334444443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.30  E-value=0.29  Score=44.41  Aligned_cols=85  Identities=20%  Similarity=0.198  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE--  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~--  251 (364)
                      .|+++.|.| .|.+|...++.++.+|.+|++..++...     .+.....    .++.+.+.. .|+|+.++...+..  
T Consensus       121 ~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~-----~~~~~~~----~~l~ell~~-aDiv~~~lp~t~~T~~  189 (303)
T PRK06436        121 YNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVN-----DGISSIY----MEPEDIMKK-SDFVLISLPLTDETRG  189 (303)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcc-----cCccccc----CCHHHHHhh-CCEEEECCCCCchhhc
Confidence            579999999 9999999999999999999998765321     1221111    133333334 89999988864222  


Q ss_pred             ---HHHHhhccCCCEEEEEcc
Q 017901          252 ---RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~  269 (364)
                         ...++.|+++..+|.++-
T Consensus       190 li~~~~l~~mk~ga~lIN~sR  210 (303)
T PRK06436        190 MINSKMLSLFRKGLAIINVAR  210 (303)
T ss_pred             CcCHHHHhcCCCCeEEEECCC
Confidence               356788899888887763

>PRK14982 acyl-ACP reductase; Provisional

Probab=94.30  E-value=0.25  Score=45.38  Aligned_cols=92  Identities=16%  Similarity=0.163  Sum_probs=61.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-cCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVA-SGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~-~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      -.+.+|+|+||+|.+|..+++.+.. .|. +++.+.++.++  .+..+++...+     .++.+.+.+ +|+|+-+++.+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-----~~l~~~l~~-aDiVv~~ts~~  226 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-----LSLEEALPE-ADIVVWVASMP  226 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-----HhHHHHHcc-CCEEEECCcCC
Confidence            4678999999999999999988864 464 77777776543  33444432222     134445556 99999999985


Q ss_pred             hhHHHHHhhccCCCEEEEEccC
Q 017901          249 ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..+..-...++++-.++..+.+
T Consensus       227 ~~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        227 KGVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             cCCcCCHHHhCCCeEEEEecCC
Confidence            3322222456777788888766

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.29  E-value=0.18  Score=44.58  Aligned_cols=97  Identities=20%  Similarity=0.234  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCcc----HHHH---HHcCC-cee--eeCCChh----HHHHhc--
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS----IDRV---LAAGA-EQA--VDYSSKD----IELAIK--  235 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~----~~~~---~~~g~-~~v--~~~~~~~----~~~~i~--  235 (364)
                      .|++++|+|++  +++|.++++.+...|++|+.+.++.+    .+.+   .+.+. ...  .|..+.+    +.+.+.  
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            46889999975  79999999999999999987754321    1222   22221 112  2333322    222222  


Q ss_pred             -CCccEEEECCCCc-------hh----------------------HHHHHhhccCCCEEEEEccC
Q 017901          236 -GKFDAVLDTIGAP-------ET----------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       236 -g~~D~vid~~g~~-------~~----------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                       |++|+++.+.|..       ..                      .+.++..++++|+++.++..
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~  149 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL  149 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence             5699999998842       01                      24566677778999888754

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.28  E-value=0.26  Score=44.11  Aligned_cols=78  Identities=19%  Similarity=0.316  Sum_probs=54.5

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCcee-----------eeCCC-hhHHHHhc-
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA-----------VDYSS-KDIELAIK-  235 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v-----------~~~~~-~~~~~~i~-  235 (364)
                      ..++...++|.|++.++|++.+..++..|+.|..+.++.++  +..++++....           .+|+. ....++++ 
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            33455789999999999999999999999999999999875  33444443211           11111 12233333 


Q ss_pred             --CCccEEEECCCCc
Q 017901          236 --GKFDAVLDTIGAP  248 (364)
Q Consensus       236 --g~~D~vid~~g~~  248 (364)
                        +.+|.+|.|.|..
T Consensus       109 ~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGVA  123 (331)
T ss_pred             ccCCcceEEEecCcc
Confidence              5689999999974

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.28  E-value=0.51  Score=43.94  Aligned_cols=93  Identities=15%  Similarity=0.201  Sum_probs=65.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCcc--H--HHHHHcCCceeeeCCCh---hHH---------------
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS--I--DRVLAAGAEQAVDYSSK---DIE---------------  231 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~--~--~~~~~~g~~~v~~~~~~---~~~---------------  231 (364)
                      ++|.|.|++|.+|..+..+.+..  .++|++++-+..  +  +.+++++...+.-.+..   .+.               
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            47899999999999999998776  568888863322  2  56788887765433321   111               


Q ss_pred             ---HHhc-CCccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          232 ---LAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       232 ---~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                         +.+. ..+|+|+.++++...+.-.+.+++.|-++.+..
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLAN  122 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALAN  122 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeC
Confidence               1111 138999999998767888889998887776643

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.26  E-value=0.14  Score=39.98  Aligned_cols=79  Identities=20%  Similarity=0.211  Sum_probs=47.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH-HH-HHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI-DR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-~~-~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~  251 (364)
                      .-+|-|.| +|.+|..+...++..|..|..+.+ +.+. +. ...++...+.+.     .+.+.. +|++|-++.+. .+
T Consensus        10 ~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~-----~~~~~~-aDlv~iavpDd-aI   81 (127)
T PF10727_consen   10 RLKIGIIG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL-----EEILRD-ADLVFIAVPDD-AI   81 (127)
T ss_dssp             --EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T-----TGGGCC--SEEEE-S-CC-HH
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc-----cccccc-CCEEEEEechH-HH
Confidence            35789999 799999999999999999999854 4332 33 333444333332     222334 99999999998 77


Q ss_pred             HHHHhhccCC
Q 017901          252 RLGLNFLKRG  261 (364)
Q Consensus       252 ~~~~~~l~~~  261 (364)
                      ....+.|+..
T Consensus        82 ~~va~~La~~   91 (127)
T PF10727_consen   82 AEVAEQLAQY   91 (127)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHHHh
Confidence            7666666543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=94.26  E-value=0.17  Score=47.79  Aligned_cols=89  Identities=25%  Similarity=0.360  Sum_probs=57.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-H-HHHH-cCC--c-eeeeCCCh-hHHHHhcCCccEEEECCCCc
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-D-RVLA-AGA--E-QAVDYSSK-DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~-~~~~-~g~--~-~v~~~~~~-~~~~~i~g~~D~vid~~g~~  248 (364)
                      |+|.|+ |.+|..+++.+...+.  +|++..++.++ + .+.+ .+.  . ..+|.++. ++.+.+++ .|+|++|+|..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG-CDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT-SSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhc-CCEEEECCccc
Confidence            689997 9999999999988764  78888887765 3 3333 222  1 23444443 45555556 99999999987


Q ss_pred             hhHHHHHhhccCCCEEEEEc
Q 017901          249 ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g  268 (364)
                      .....+-.|++.|-.++...
T Consensus        79 ~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   79 FGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             GHHHHHHHHHHHT-EEEESS
T ss_pred             hhHHHHHHHHHhCCCeeccc
Confidence            55666677778888888854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.25  E-value=0.27  Score=46.49  Aligned_cols=101  Identities=22%  Similarity=0.267  Sum_probs=63.1

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--------HHHHHc-CCcee-eeCCCh-hHHHHhcC--
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--------DRVLAA-GAEQA-VDYSSK-DIELAIKG--  236 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--------~~~~~~-g~~~v-~~~~~~-~~~~~i~g--  236 (364)
                      .+-..+.+|+|.||+|.+|..+++.+...|.+|+++.++...        +..... ++..+ .|..+. ++...+.+  
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence            344567899999999999999999999899999999886532        111111 23222 244443 33333432  


Q ss_pred             -CccEEEECCCCch------------hHHHHHhhccCC--CEEEEEccC
Q 017901          237 -KFDAVLDTIGAPE------------TERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       237 -~~D~vid~~g~~~------------~~~~~~~~l~~~--G~~v~~g~~  270 (364)
                       ++|+||.|.+...            ....+++.++..  +++|.++..
T Consensus       135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence             4999999987421            122344444433  478877643

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.23  E-value=0.25  Score=43.96  Aligned_cols=71  Identities=17%  Similarity=0.277  Sum_probs=46.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce-ee--eCCCh-h---HHHHhc---CCccEE
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ-AV--DYSSK-D---IELAIK---GKFDAV  241 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~-v~--~~~~~-~---~~~~i~---g~~D~v  241 (364)
                      +++|+|++|.+|..+++.+...|++|+.+.++.+. + .   +...+.+. .+  |..+. +   +.+.+.   +++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999998899999998876543 2 2   22333221 12  33332 1   222221   459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999885

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=94.23  E-value=0.48  Score=38.11  Aligned_cols=90  Identities=30%  Similarity=0.313  Sum_probs=59.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhH-------HHHhc-----CCccEEEE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDI-------ELAIK-----GKFDAVLD  243 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~-------~~~i~-----g~~D~vid  243 (364)
                      .+|+|+|+-|.+|.++++..|..++-|..+.-.+..+    .....+++.+ .++       .+++.     .++|.||.
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~----Ad~sI~V~~~-~swtEQe~~v~~~vg~sL~gekvDav~C   78 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----ADSSILVDGN-KSWTEQEQSVLEQVGSSLQGEKVDAVFC   78 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----ccceEEecCC-cchhHHHHHHHHHHHHhhcccccceEEE
Confidence            4799999999999999999999999888875443321    1122233322 222       22222     35999998


Q ss_pred             CCCCch--------h------------------HHHHHhhccCCCEEEEEccC
Q 017901          244 TIGAPE--------T------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       244 ~~g~~~--------~------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..|+-.        .                  ...+...|++||.+-+.|..
T Consensus        79 VAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk  131 (236)
T KOG4022|consen   79 VAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK  131 (236)
T ss_pred             eeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence            777531        0                  24556689999999888753

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.23  E-value=0.23  Score=45.50  Aligned_cols=92  Identities=21%  Similarity=0.237  Sum_probs=58.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC----CeEEEeeCCccH---HHHHHcCCc--------------eeeeCCC-----hhH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG----CHVSATCGSKSI---DRVLAAGAE--------------QAVDYSS-----KDI  230 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g----~~vi~~~~~~~~---~~~~~~g~~--------------~v~~~~~-----~~~  230 (364)
                      +|.|+| .|.+|..+.+++...+    ..|.++..-...   ..+.+.+..              -.++.+.     +.-
T Consensus         1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            478999 5999999999987653    678887442222   233332210              0111100     000


Q ss_pred             HHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          231 ELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       231 ~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.+.    | +|+||+|+|.......+...++.|++.|.++.+
T Consensus        80 p~~~~w~~~g-vDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        80 PEALPWRALG-VDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             hhhccccccC-CCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence            11111    5 999999999987778888999999899988865

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.20  E-value=0.28  Score=44.74  Aligned_cols=85  Identities=20%  Similarity=0.212  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|+++.|.| .|.+|..++++++.+|.+|++..+.....   ..+..      ..++.+.+.. .|+|+-++...+.   
T Consensus       144 ~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~---~~~~~------~~~l~ell~~-sDvv~lh~Plt~~T~~  212 (311)
T PRK08410        144 KGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK---NEEYE------RVSLEELLKT-SDIISIHAPLNEKTKN  212 (311)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc---ccCce------eecHHHHhhc-CCEEEEeCCCCchhhc
Confidence            578999999 99999999999999999999987643211   11111      1133444434 7887777664311   


Q ss_pred             --HHHHHhhccCCCEEEEEcc
Q 017901          251 --ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~  269 (364)
                        -...+..|+++..+|.++-
T Consensus       213 li~~~~~~~Mk~~a~lIN~aR  233 (311)
T PRK08410        213 LIAYKELKLLKDGAILINVGR  233 (311)
T ss_pred             ccCHHHHHhCCCCeEEEECCC
Confidence              1466778888888887763

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.17  E-value=0.52  Score=40.41  Aligned_cols=95  Identities=18%  Similarity=0.170  Sum_probs=58.7

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCcee--------------eeCCChhH---HH
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQA--------------VDYSSKDI---EL  232 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~~v--------------~~~~~~~~---~~  232 (364)
                      +.++.+||+.|  .+.|.-++-+|. .|.+|+++.-++.. +. +.+.+....              ++....|+   ..
T Consensus        32 ~~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        32 LPAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            35778999998  346888888875 69999999776653 43 333332210              00000111   11


Q ss_pred             HhcCCccEEEECCCC--------chhHHHHHhhccCCCEEEEEcc
Q 017901          233 AIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       233 ~i~g~~D~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ...+++|.|+|+..-        ...+..+.++|+|||+++..+.
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            111348999997531        2257799999999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.16  E-value=0.21  Score=43.69  Aligned_cols=102  Identities=21%  Similarity=0.226  Sum_probs=65.2

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-----HHHHHcCCceeeeCCC-----hhHHHHh
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-----DRVLAAGAEQAVDYSS-----KDIELAI  234 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-----~~~~~~g~~~v~~~~~-----~~~~~~i  234 (364)
                      ....++.||++|+=.|  .+.|.++..+++..|.  +|+....+++.     +.++..|....+....     ..+...+
T Consensus        33 ~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~  110 (247)
T PF08704_consen   33 LMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEEL  110 (247)
T ss_dssp             HHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-
T ss_pred             HHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccc
Confidence            3568999999999988  3358888889988774  89988665543     3456677653222211     1221122


Q ss_pred             cCCccEEEECCCCc-hhHHHHHhhc-cCCCEEEEEccC
Q 017901          235 KGKFDAVLDTIGAP-ETERLGLNFL-KRGGHYMTLHGE  270 (364)
Q Consensus       235 ~g~~D~vid~~g~~-~~~~~~~~~l-~~~G~~v~~g~~  270 (364)
                      .+.+|.||-=...+ ..+..+.+.| ++||+++++.-.
T Consensus       111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~  148 (247)
T PF08704_consen  111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPC  148 (247)
T ss_dssp             TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESS
T ss_pred             cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            22389877666665 5899999999 899999999643

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.12  E-value=0.27  Score=45.02  Aligned_cols=82  Identities=21%  Similarity=0.201  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|+++.|.| .|.+|..+++.++.+|.+|++..+.....     ...      ..++.+.+.. .|+|+.+..-...   
T Consensus       147 ~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~~-----~~~------~~~l~ell~~-sDiv~l~lPlt~~T~~  213 (317)
T PRK06487        147 EGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRPA-----RPD------RLPLDELLPQ-VDALTLHCPLTEHTRH  213 (317)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCcc-----ccc------ccCHHHHHHh-CCEEEECCCCChHHhc
Confidence            578999999 99999999999999999999886542211     111      1133333433 7888877764321   


Q ss_pred             --HHHHHhhccCCCEEEEEc
Q 017901          251 --ERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g  268 (364)
                        -...+..|+++..+|.++
T Consensus       214 li~~~~~~~mk~ga~lIN~a  233 (317)
T PRK06487        214 LIGARELALMKPGALLINTA  233 (317)
T ss_pred             CcCHHHHhcCCCCeEEEECC
Confidence              146677888888888776

>PLN02214 cinnamoyl-CoA reductase

Probab=94.11  E-value=0.2  Score=46.37  Aligned_cols=96  Identities=19%  Similarity=0.243  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcC--Cc--eee--eCCCh-hHHHHhcCCccEEE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAG--AE--QAV--DYSSK-DIELAIKGKFDAVL  242 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g--~~--~v~--~~~~~-~~~~~i~g~~D~vi  242 (364)
                      ..+.+|+|+||+|.+|..+++.+...|.+|+++.++.+.   ..+..+.  ..  ..+  |..+. ++.+.+.+ +|+||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~Vi   86 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDG-CDGVF   86 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhc-CCEEE
Confidence            356789999999999999999999999999999876442   1122221  11  122  33332 34445556 99999


Q ss_pred             ECCCCch------------hHHHHHhhccCCC--EEEEEcc
Q 017901          243 DTIGAPE------------TERLGLNFLKRGG--HYMTLHG  269 (364)
Q Consensus       243 d~~g~~~------------~~~~~~~~l~~~G--~~v~~g~  269 (364)
                      .+.+...            .....+++++..|  ++|.++.
T Consensus        87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS  127 (342)
T PLN02214         87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS  127 (342)
T ss_pred             EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence            9987420            1233444444433  7887664

>PRK06932 glycerate dehydrogenase; Provisional

Probab=94.09  E-value=0.39  Score=43.86  Aligned_cols=84  Identities=20%  Similarity=0.156  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE--  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~--  251 (364)
                      .|+++.|.| .|.+|...+++++.+|++|++..+.....    ...      .-.++.+.+.. .|+|+-++.-....  
T Consensus       146 ~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~~~~~----~~~------~~~~l~ell~~-sDiv~l~~Plt~~T~~  213 (314)
T PRK06932        146 RGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHKGASV----CRE------GYTPFEEVLKQ-ADIVTLHCPLTETTQN  213 (314)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCcccc----ccc------ccCCHHHHHHh-CCEEEEcCCCChHHhc
Confidence            478999999 99999999999999999999875432111    010      01134444444 89988887743221  


Q ss_pred             ---HHHHhhccCCCEEEEEcc
Q 017901          252 ---RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~  269 (364)
                         ...+..|+++..+|.++-
T Consensus       214 li~~~~l~~mk~ga~lIN~aR  234 (314)
T PRK06932        214 LINAETLALMKPTAFLINTGR  234 (314)
T ss_pred             ccCHHHHHhCCCCeEEEECCC
Confidence               477788899988888873

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=94.07  E-value=0.35  Score=44.82  Aligned_cols=93  Identities=15%  Similarity=0.187  Sum_probs=58.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHH-HHcC-Cce--eeeCCChhHHHHhcCCccEEEECCCCch
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV-LAAG-AEQ--AVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~-~~~g-~~~--v~~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      .+|+|.|++|.+|...++++..+ +.++++++++... +.+ ...+ ...  ...+++.+.. ...+ +|+||-|++...
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-vD~Vf~alP~~~   80 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE-ILAG-ADVVFLALPHGV   80 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH-HhcC-CCEEEECCCcHH
Confidence            37899999999999888888766 6788888764332 222 2211 110  0111111111 2235 999999999985


Q ss_pred             hHHHHHhhccCCCEEEEEccC
Q 017901          250 TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..+.+..+++.|-.+|..+..
T Consensus        81 ~~~~v~~a~~aG~~VID~S~~  101 (343)
T PRK00436         81 SMDLAPQLLEAGVKVIDLSAD  101 (343)
T ss_pred             HHHHHHHHHhCCCEEEECCcc
Confidence            566666666666678888754

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.03  E-value=0.51  Score=40.65  Aligned_cols=96  Identities=17%  Similarity=0.116  Sum_probs=57.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCcee--------------eeCCChhHHH-
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQA--------------VDYSSKDIEL-  232 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~~v--------------~~~~~~~~~~-  232 (364)
                      ..+.++.+||+.|  ++.|.-+.-+|. .|++|+++.-++.. +. .++.+....              ++....++.+ 
T Consensus        33 ~~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l  109 (218)
T PRK13255         33 LALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL  109 (218)
T ss_pred             hCCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence            3456778999998  346888888876 69999999766553 33 334432210              0000011111 


Q ss_pred             --HhcCCccEEEECCCC--------chhHHHHHhhccCCCEEEEEc
Q 017901          233 --AIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       233 --~i~g~~D~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  268 (364)
                        ...+.+|.|+|..--        ...+..+.++|+|||+++.+.
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~  155 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT  155 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence              111348999996531        125788999999999755543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.01  E-value=0.22  Score=43.58  Aligned_cols=73  Identities=25%  Similarity=0.371  Sum_probs=47.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCce---eeeCCChh-HH---HHhc---CCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQ---AVDYSSKD-IE---LAIK---GKFD  239 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~---v~~~~~~~-~~---~~i~---g~~D  239 (364)
                      ++++||+|++|.+|..++..+...|++|+++.++.+. +.+    ...+...   ..|..+.+ +.   +.+.   +++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            3579999999999999999998999999999887553 222    2223221   12444332 21   1221   3489


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        81 ~vi~~a~~   88 (255)
T TIGR01963        81 ILVNNAGI   88 (255)
T ss_pred             EEEECCCC
Confidence            99998874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=94.00  E-value=0.61  Score=39.97  Aligned_cols=99  Identities=24%  Similarity=0.353  Sum_probs=67.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-----HHHHHcCCcee---eeC-CChhHHHH-hc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-----DRVLAAGAEQA---VDY-SSKDIELA-IK  235 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-----~~~~~~g~~~v---~~~-~~~~~~~~-i~  235 (364)
                      ..+.....+++|=.|  ..+|+.++.+|..+.  .+++.+..++++     +.+++.|.+..   +.. +.-+..+. ..
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~  130 (219)
T COG4122          53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLD  130 (219)
T ss_pred             HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccC
Confidence            445667888999998  568999999998876  478888777653     34577787652   221 22233332 22


Q ss_pred             CCccEEEE-CCCC--chhHHHHHhhccCCCEEEEEc
Q 017901          236 GKFDAVLD-TIGA--PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       236 g~~D~vid-~~g~--~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +.+|+||- +--.  +..++.++++|++||.+|.=.
T Consensus       131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         131 GSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            56999764 4333  357899999999999988653

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=93.99  E-value=1.1  Score=40.21  Aligned_cols=93  Identities=17%  Similarity=0.148  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc--CCccEEEECCCCchhH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAPETE  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~g~~~~~  251 (364)
                      ...+|+..| +|-+|.-.+--++.+|..|+++.+=...-..+-....+|+|..+.+....+-  .+.|+++--+-.- ..
T Consensus        11 ~a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVAhrs~Vi~MlD~~al~avv~rekPd~IVpEiEAI-~t   88 (394)
T COG0027          11 QATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAI-AT   88 (394)
T ss_pred             CCeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhhhheeeeeccCHHHHHHHHHhhCCCeeeehhhhh-hH
Confidence            346788888 8999999999999999999999875543222222344688887765444332  3489887544443 44


Q ss_pred             HHHHhhccCCCEEEEEc
Q 017901          252 RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g  268 (364)
                      +...++=..|.++|-..
T Consensus        89 d~L~elE~~G~~VVP~A  105 (394)
T COG0027          89 DALVELEEEGYTVVPNA  105 (394)
T ss_pred             HHHHHHHhCCceEccch
Confidence            56666667777777554

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=93.99  E-value=0.36  Score=42.09  Aligned_cols=74  Identities=27%  Similarity=0.358  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-cc-H-HH---HHHcCCce-ee--eCCCh-hHH---HHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KS-I-DR---VLAAGAEQ-AV--DYSSK-DIE---LAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~-~-~~---~~~~g~~~-v~--~~~~~-~~~---~~i~---g~  237 (364)
                      .+++++|+|++|.+|..+++.+...|++|+++.+. ++ . +.   +...+... .+  |..+. ++.   +.+.   ++
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999888899999876443 22 1 22   22333321 22  33332 222   2221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999999886

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=93.98  E-value=0.29  Score=47.47  Aligned_cols=73  Identities=22%  Similarity=0.363  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc----------------------cHHHHHHcCCceeeeCCCh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----------------------SIDRVLAAGAEQAVDYSSK---  228 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~----------------------~~~~~~~~g~~~v~~~~~~---  228 (364)
                      .+++|+|.| +|+.|+.++..++..|.+|+.+...+                      ..+.++++|++..++..-.   
T Consensus       140 ~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       140 TGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            578999999 89999999999999999988775432                      1245678888755543211   


Q ss_pred             hHHHHhcCCccEEEECCCCc
Q 017901          229 DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+.+...+ +|.||.++|..
T Consensus       219 ~~~~~~~~-~D~vilAtGa~  237 (467)
T TIGR01318       219 SLDDLLED-YDAVFLGVGTY  237 (467)
T ss_pred             CHHHHHhc-CCEEEEEeCCC
Confidence            11121124 99999999985

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=93.95  E-value=0.23  Score=46.54  Aligned_cols=73  Identities=23%  Similarity=0.165  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHH-HHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIG  246 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~-~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g  246 (364)
                      ..+++|+|+|++|.+|..++..+...|.+|+++.+...... ...++... ..|..+. .+...+.+ +|+||.+.+
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~D~Vih~Aa   94 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKG-VDHVFNLAA   94 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhC-CCEEEEccc
Confidence            35689999999999999999999999999999986533111 01111111 1233332 23333345 999999985

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=93.93  E-value=0.44  Score=43.01  Aligned_cols=94  Identities=12%  Similarity=0.152  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCc----cH-HHHHHcC---Cc---eeeeCCCh-hHHHHhcCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK----SI-DRVLAAG---AE---QAVDYSSK-DIELAIKGKFD  239 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~----~~-~~~~~~g---~~---~v~~~~~~-~~~~~i~g~~D  239 (364)
                      ..+++++|.|+ |++|.+++..+...|++ |+.+.++.    +. +.+.++.   ..   ...+..+. ++...+.. +|
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~-~D  201 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIAS-SD  201 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhcc-CC
Confidence            35788999995 89999999888889996 87777764    22 3333332   11   11233222 23333334 89


Q ss_pred             EEEECCCCc-----hhHHH-HHhhccCCCEEEEEc
Q 017901          240 AVLDTIGAP-----ETERL-GLNFLKRGGHYMTLH  268 (364)
Q Consensus       240 ~vid~~g~~-----~~~~~-~~~~l~~~G~~v~~g  268 (364)
                      ++|+|+.-.     +.... ....+.++..++.+-
T Consensus       202 ilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v  236 (289)
T PRK12548        202 ILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTV  236 (289)
T ss_pred             EEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEec
Confidence            999988532     01111 124566666666554

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=93.92  E-value=0.32  Score=44.57  Aligned_cols=73  Identities=26%  Similarity=0.346  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH---H-cCC---ceee--eCCCh-hHHHHhcCCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL---A-AGA---EQAV--DYSSK-DIELAIKGKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~---~-~g~---~~v~--~~~~~-~~~~~i~g~~D~vi  242 (364)
                      .++++||+||+|.+|..+++.+...|++|+++.++... ....   . .+.   .+.+  |..+. ++.+.+.+ +|+||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG-CETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC-CCEEE
Confidence            47899999999999999999999999999887665432 1111   1 111   1122  33333 34444445 99999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus        83 h~A~~   87 (325)
T PLN02989         83 HTASP   87 (325)
T ss_pred             EeCCC
Confidence            99873

>TIGR02415 23BDH acetoin reductases

Probab=93.91  E-value=0.33  Score=42.54  Aligned_cols=72  Identities=25%  Similarity=0.376  Sum_probs=47.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh-HHH---Hhc---CCccE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD-IEL---AIK---GKFDA  240 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~-~~~---~i~---g~~D~  240 (364)
                      ++++|.|++|.+|...++.+...|++|+.+.++++.  +.   +...+... .  .|..+.+ +.+   .+.   +++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            368999999999999999999999999998876542  22   23334221 1  2333332 222   221   45899


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        81 vi~~ag~   87 (254)
T TIGR02415        81 MVNNAGV   87 (254)
T ss_pred             EEECCCc
Confidence            9999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=93.90  E-value=0.53  Score=40.50  Aligned_cols=37  Identities=27%  Similarity=0.335  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      -.|.+|+|.| .|.+|+.+++.+...|+++++++..+.
T Consensus        21 l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211          21 LEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            3688999999 999999999999999999888865443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.89  E-value=0.52  Score=42.34  Aligned_cols=73  Identities=21%  Similarity=0.209  Sum_probs=44.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcC----CceeeeCCChhHHHHhcCCccEEEECC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAG----AEQAVDYSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g----~~~v~~~~~~~~~~~i~g~~D~vid~~  245 (364)
                      ..+++++|.| +|+.+.+++..+...|+ +++.+.|+.++  +++.++.    ...+......++...+.. +|+|++|+
T Consensus       125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~-~divINaT  202 (283)
T PRK14027        125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA-ADGVVNAT  202 (283)
T ss_pred             cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhh-cCEEEEcC
Confidence            3478899999 79999999988888998 56666666544  3333332    111111111112222334 89999997


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      .-
T Consensus       203 p~  204 (283)
T PRK14027        203 PM  204 (283)
T ss_pred             CC
Confidence            64

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.89  E-value=0.3  Score=45.11  Aligned_cols=89  Identities=17%  Similarity=0.256  Sum_probs=55.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC---eEEEeeCCccH-HHHHHcCCceeee-CCChhHHHHhcCCccEEEECCCCchh
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKSI-DRVLAAGAEQAVD-YSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~---~vi~~~~~~~~-~~~~~~g~~~v~~-~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      .+|+|.||+|.+|..+++++...+.   ++.++++.... +.+.-.+.+..+. ...    ..+.+ +|+||.|+|...+
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~----~~~~~-vDvVf~A~g~g~s   76 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTT----FDFSG-VDIALFSAGGSVS   76 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCH----HHHcC-CCEEEECCChHHH
Confidence            4799999999999999999988654   55666554332 2221112222222 111    12235 9999999999844


Q ss_pred             HHHHHhhccCCCEEEEEcc
Q 017901          251 ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~  269 (364)
                      ...+-+.+..|..+|..+.
T Consensus        77 ~~~~~~~~~~G~~VIDlS~   95 (334)
T PRK14874         77 KKYAPKAAAAGAVVIDNSS   95 (334)
T ss_pred             HHHHHHHHhCCCEEEECCc
Confidence            4455555566666775553

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=93.89  E-value=0.76  Score=41.26  Aligned_cols=56  Identities=21%  Similarity=0.231  Sum_probs=42.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC---Cc-cHHHHHHcCCceeee
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG---SK-SIDRVLAAGAEQAVD  224 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~---~~-~~~~~~~~g~~~v~~  224 (364)
                      ..+.+++|+ .+|-+.+|..|++.+.+|+.+|++++.+..   +. ++..++.+|+.-++.
T Consensus        55 ~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t  114 (300)
T COG0031          55 KRGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT  114 (300)
T ss_pred             HcCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence            557799998 566677999999999999999998887732   22 336778888875543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=93.88  E-value=0.4  Score=44.05  Aligned_cols=73  Identities=18%  Similarity=0.206  Sum_probs=47.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH--HHHHHcCCc--ee--eeCCCh-hHHHHhcCCccEEEEC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI--DRVLAAGAE--QA--VDYSSK-DIELAIKGKFDAVLDT  244 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~--~~~~~~g~~--~v--~~~~~~-~~~~~i~g~~D~vid~  244 (364)
                      .|.++||+||+|.+|..+++.+...|  .+|+++.++...  .....+...  .+  .|..+. .+.+.+.+ +|+||.+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~-iD~Vih~   81 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRG-VDYVVHA   81 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhc-CCEEEEC
Confidence            36789999999999999998887775  688888765443  222222211  12  243443 33344445 9999998


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        82 Ag~   84 (324)
T TIGR03589        82 AAL   84 (324)
T ss_pred             ccc
Confidence            874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=93.86  E-value=0.31  Score=43.53  Aligned_cols=208  Identities=22%  Similarity=0.229  Sum_probs=114.5

Q ss_pred             CCCeEEEEEeEeecCh-hhhh-hhccCCccccCCCCCcccc-cceeEEEEeec-CCCCCCCCCCEEEEecCCCCC-----
Q 017901           55 KPNEVLVRTRAVSINP-LDTR-MRSGYGRSIFEPLLPLILG-RDISGEVAAVG-ASVRSLTVGQEVFGALHPTAV-----  125 (364)
Q Consensus        55 ~~~eVlV~v~~~~i~~-~D~~-~~~g~~~~~~~~~~p~~~G-~e~~G~V~~vG-~~~~~~~~Gd~V~~~~~~~~~-----  125 (364)
                      ..+||+|+.-+..-.+ +|-. .-.|..  ..+ +.--+.+ .|.+=.|.+-- ++..-|+.|+..+.+.+....     
T Consensus        29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~--Iv~-ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~  105 (371)
T COG0686          29 HGHEVLVETGAGAGSGFDDDDYEAAGAK--IVA-TAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTE  105 (371)
T ss_pred             CCcEEEEecCCcCCCCCChHHHHHcCCE--Eec-CHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHH
Confidence            5689999988765543 3332 223321  110 1112334 56666666532 234569999999887663210     


Q ss_pred             ----CCcc-eeEEee-cCCccccCCCCCChhhhccccchHHHHHHHHHHhc----------ccCCCCEEEEEcCCchHHH
Q 017901          126 ----RGTY-ADYAVL-SEDELTPKPVSVTHADASAIPFAALTAWRALKCAA----------RMSEGQRLLVLGGGGAVGF  189 (364)
Q Consensus       126 ----~g~~-~~~~~~-~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~----------~~~~g~~vli~g~~g~~G~  189 (364)
                          .|.- -.|-.+ ..+.-.|+--  ++.+.|.-.....-|++.-+..+          .+.+ -+|.|.| .|.+|.
T Consensus       106 ~l~~~gvtaIayETV~~~~g~lPlLa--PMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~-~kv~iiG-GGvvgt  181 (371)
T COG0686         106 ALLKSGVTAIAYETVQLPDGNLPLLA--PMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLP-AKVVVLG-GGVVGT  181 (371)
T ss_pred             HHHHcCcceEEEEEEEcCCCCCcccc--hHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCC-ccEEEEC-Cccccc
Confidence                0100 012222 1111222211  12222222222334454221111          1233 3467778 699999


Q ss_pred             HHHHHHHHcCCeEEEeeCCcc-HHHHHH-cCCc-eeeeCCChhHHHHhcCCccEEEECC--CCc---h-hHHHHHhhccC
Q 017901          190 AAVQFSVASGCHVSATCGSKS-IDRVLA-AGAE-QAVDYSSKDIELAIKGKFDAVLDTI--GAP---E-TERLGLNFLKR  260 (364)
Q Consensus       190 ~~~~~a~~~g~~vi~~~~~~~-~~~~~~-~g~~-~v~~~~~~~~~~~i~g~~D~vid~~--g~~---~-~~~~~~~~l~~  260 (364)
                      -++++|.-+|++|+....+.+ +..+.. ++-. ++.-.+...+.+.+.. .|++|.++  ++.   . ..++.++.|+|
T Consensus       182 naAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~-aDlvIgaVLIpgakaPkLvt~e~vk~Mkp  260 (371)
T COG0686         182 NAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKK-ADLVIGAVLIPGAKAPKLVTREMVKQMKP  260 (371)
T ss_pred             hHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhh-ccEEEEEEEecCCCCceehhHHHHHhcCC
Confidence            999999999999999976644 444433 3333 3344455577777776 99999863  221   1 45788999999


Q ss_pred             CCEEEEEccC
Q 017901          261 GGHYMTLHGE  270 (364)
Q Consensus       261 ~G~~v~~g~~  270 (364)
                      |+.+|.+...
T Consensus       261 GsVivDVAiD  270 (371)
T COG0686         261 GSVIVDVAID  270 (371)
T ss_pred             CcEEEEEEEc
Confidence            9999998765

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.86  E-value=0.32  Score=42.31  Aligned_cols=73  Identities=26%  Similarity=0.422  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH--HHH---HHcCCc-ee--eeCCChh-HHH---Hhc---CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI--DRV---LAAGAE-QA--VDYSSKD-IEL---AIK---GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~--~~~---~~~g~~-~v--~~~~~~~-~~~---~i~---g~~  238 (364)
                      +++++|.|++|.+|..++..+...|++|+.+ .++.+.  ...   ...+.. .+  .|..+.+ +..   .+.   +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999888889999888 665443  222   222221 12  2333322 211   111   359


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998875

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=93.85  E-value=1.4  Score=33.38  Aligned_cols=90  Identities=16%  Similarity=0.123  Sum_probs=61.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC--CChhHHHHhc-CCccEEEECCCCchhH--
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY--SSKDIELAIK-GKFDAVLDTIGAPETE--  251 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~--~~~~~~~~i~-g~~D~vid~~g~~~~~--  251 (364)
                      |+|.| .|.+|...++.++..+.+|+.+..+++. +.+++.|.. ++..  .+.+...... .+++.++-+++.+..-  
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~   78 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENLL   78 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHH
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHHH
Confidence            57888 7999999999999977689999888776 778888865 4433  3334444433 2399999999886322  


Q ss_pred             -HHHHhhccCCCEEEEEcc
Q 017901          252 -RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 -~~~~~~l~~~G~~v~~g~  269 (364)
                       ...++.+.+..+++....
T Consensus        79 ~~~~~r~~~~~~~ii~~~~   97 (116)
T PF02254_consen   79 IALLARELNPDIRIIARVN   97 (116)
T ss_dssp             HHHHHHHHTTTSEEEEEES
T ss_pred             HHHHHHHHCCCCeEEEEEC
Confidence             234444556677776654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN00203 glutamyl-tRNA reductase

Probab=93.85  E-value=0.6  Score=45.65  Aligned_cols=72  Identities=18%  Similarity=0.242  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      +.+|+|.| +|.+|.++++.+...|+ +|+++.++.++  .++.+++...+....-.+..+.+.+ +|+||.|++.+
T Consensus       266 ~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~-aDVVIsAT~s~  340 (519)
T PLN00203        266 SARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAE-ADVVFTSTSSE  340 (519)
T ss_pred             CCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhc-CCEEEEccCCC
Confidence            68899999 69999999999999997 68777777554  3444553111111111234444555 99999999875

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.84  E-value=0.38  Score=42.10  Aligned_cols=73  Identities=22%  Similarity=0.275  Sum_probs=46.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-ccH--HHHHHcCCc-ee--eeCCCh-hH---HHHhc---CC-ccE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSI--DRVLAAGAE-QA--VDYSSK-DI---ELAIK---GK-FDA  240 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~~--~~~~~~g~~-~v--~~~~~~-~~---~~~i~---g~-~D~  240 (364)
                      +++++|+||+|.+|..++..+...|++|+.+.++ ...  ....+++.. .+  .|..+. ++   .+.+.   |+ +|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            5789999999999999999998899999877543 222  223333322 11  233332 22   22221   43 899


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        85 li~~ag~   91 (253)
T PRK08642         85 VVNNALA   91 (253)
T ss_pred             EEECCCc
Confidence            9998763

>PRK07340 ornithine cyclodeaminase; Validated

Probab=93.84  E-value=0.49  Score=43.05  Aligned_cols=93  Identities=15%  Similarity=0.026  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-cCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVA-SGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~-~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      ....+++|.| +|..|...+..+.. .+. +|....++.++  .++.++.... +.....+..+.+.+ +|+|+.|+.+.
T Consensus       123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~~~~~av~~-aDiVitaT~s~  199 (304)
T PRK07340        123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPLDGEAIPEA-VDLVVTATTSR  199 (304)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEECCHHHHhhc-CCEEEEccCCC
Confidence            4667899999 89999999888865 565 45555665543  4444443210 01001234445556 99999999986


Q ss_pred             hhHHHHHhhccCCCEEEEEccC
Q 017901          249 ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..+-..  .+++|-++..+|..
T Consensus       200 ~Pl~~~--~~~~g~hi~~iGs~  219 (304)
T PRK07340        200 TPVYPE--AARAGRLVVAVGAF  219 (304)
T ss_pred             CceeCc--cCCCCCEEEecCCC
Confidence            433333  47999999999865

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=93.82  E-value=0.38  Score=39.08  Aligned_cols=81  Identities=17%  Similarity=0.243  Sum_probs=53.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc------eeeeCC---ChhHHHHhcCCccEEEECCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE------QAVDYS---SKDIELAIKGKFDAVLDTIG  246 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~------~v~~~~---~~~~~~~i~g~~D~vid~~g  246 (364)
                      +|.|.| +|..|.+++..+...|.+|....++++. +.+++.+..      ..+..+   ..++.+.+.+ .|+++-++.
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~-ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALED-ADIIIIAVP   78 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT--SEEEE-S-
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCc-ccEEEeccc
Confidence            578999 8999999999999999999999888764 444443321      111111   2356666767 999999999


Q ss_pred             CchhHHHHHhhccC
Q 017901          247 APETERLGLNFLKR  260 (364)
Q Consensus       247 ~~~~~~~~~~~l~~  260 (364)
                      +. ..+..++.+++
T Consensus        79 s~-~~~~~~~~l~~   91 (157)
T PF01210_consen   79 SQ-AHREVLEQLAP   91 (157)
T ss_dssp             GG-GHHHHHHHHTT
T ss_pred             HH-HHHHHHHHHhh
Confidence            87 55555555554

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=93.80  E-value=0.87  Score=38.17  Aligned_cols=95  Identities=24%  Similarity=0.417  Sum_probs=59.8

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccH-----HHHHHcCCce--eeeCCChhHHHHhcCCccEEE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI-----DRVLAAGAEQ--AVDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~-----~~~~~~g~~~--v~~~~~~~~~~~i~g~~D~vi  242 (364)
                      .++++.+|+-.|+  +.|..+..+++. .+++|+++..+++.     +.+++.+.+.  ++..+..++..  .+++|+|+
T Consensus        42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~--~~~fDlV~  117 (187)
T PRK00107         42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ--EEKFDVVT  117 (187)
T ss_pred             hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC--CCCccEEE
Confidence            3556889999984  246666666654 36799999776653     3345566543  22222222221  23599998


Q ss_pred             ECCCC--chhHHHHHhhccCCCEEEEEcc
Q 017901          243 DTIGA--PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       243 d~~g~--~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      -....  +..+..+.+.|++||+++.+-.
T Consensus       118 ~~~~~~~~~~l~~~~~~LkpGG~lv~~~~  146 (187)
T PRK00107        118 SRAVASLSDLVELCLPLLKPGGRFLALKG  146 (187)
T ss_pred             EccccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence            75332  2467788999999999998854

>PRK06940 short chain dehydrogenase; Provisional

Probab=93.79  E-value=0.67  Score=41.40  Aligned_cols=94  Identities=19%  Similarity=0.266  Sum_probs=57.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChh----HHHHhc--CCccE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKD----IELAIK--GKFDA  240 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~----~~~~i~--g~~D~  240 (364)
                      +++++|.|+ |++|..++..+. .|++|+.+.++++.  +.   +...+.. ..  .|..+.+    +.+.+.  +++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357899995 799999999885 79999999876542  22   2223332 12  2333322    222222  55999


Q ss_pred             EEECCCCch---h---------------HHHHHhhccCCCEEEEEccC
Q 017901          241 VLDTIGAPE---T---------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       241 vid~~g~~~---~---------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|.+.|...   .               ++.+.+.++.+|+++.++..
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence            999998531   1               23444555666777766543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=93.77  E-value=0.29  Score=43.91  Aligned_cols=91  Identities=14%  Similarity=0.185  Sum_probs=59.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCCh-hHHHHhc-----CC-ccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIK-----GK-FDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~i~-----g~-~D~vid~~g~~  248 (364)
                      +|+|+||+|.+|..+++.+...|.+|.+++|+.+...  ..+... ..|..+. ++...+.     .. +|.+|-+.+..
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~   78 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPI   78 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCC
Confidence            4899999999999999999989999999998765421  123322 2455554 3444441     23 89998877642


Q ss_pred             ----hhHHHHHhhccCCC--EEEEEcc
Q 017901          249 ----ETERLGLNFLKRGG--HYMTLHG  269 (364)
Q Consensus       249 ----~~~~~~~~~l~~~G--~~v~~g~  269 (364)
                          ......++.++..|  ++|..+.
T Consensus        79 ~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        79 PDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CChhHHHHHHHHHHHHcCCCEEEEeec
Confidence                13445556555554  6777754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=93.77  E-value=0.31  Score=42.06  Aligned_cols=70  Identities=21%  Similarity=0.275  Sum_probs=48.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHH-H-HHcCCce-eeeCCChh-HHHHhcC-CccEEEECCCC
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-V-LAAGAEQ-AVDYSSKD-IELAIKG-KFDAVLDTIGA  247 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~-~-~~~g~~~-v~~~~~~~-~~~~i~g-~~D~vid~~g~  247 (364)
                      |||.||+|-+|..++..+...|..|+++.+...... . .+..... ..|..+.+ +.+.+.+ ++|.||.+.+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence            799999999999999999999999998887766532 2 2223221 23444443 3333331 27999999886

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.77  E-value=0.32  Score=42.10  Aligned_cols=70  Identities=20%  Similarity=0.282  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceee--eCCChhHHHHhc--CCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV--DYSSKDIELAIK--GKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~i~--g~~D~vid~~g~  247 (364)
                      .+++++|+|++|.+|...+..+...|++|+.+.++......  ... ..+  |..+. +.+...  +++|+++.+.|.
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~-~~~~~D~~~~-~~~~~~~~~~id~lv~~ag~   77 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS--GNF-HFLQLDLSDD-LEPLFDWVPSVDILCNTAGI   77 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccC--CcE-EEEECChHHH-HHHHHHhhCCCCEEEECCCC
Confidence            46789999999999999999988889999998776432210  011 122  22221 121111  459999999883

>PRK05855 short chain dehydrogenase; Validated

Probab=93.70  E-value=0.29  Score=48.61  Aligned_cols=74  Identities=28%  Similarity=0.373  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce-e--eeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ-A--VDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~-v--~~~~~~~----~~~~i~---g~~  238 (364)
                      .+.+++|+||+|++|..+++.+...|++|+.+.++.+. +    .+++.|... +  .|..+.+    +.+.+.   |++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            45789999999999999999999999999998887543 2    223334321 1  2333332    222222   559


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|++.|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999885

>PRK12744 short chain dehydrogenase; Provisional

Probab=93.67  E-value=0.44  Score=41.91  Aligned_cols=34  Identities=24%  Similarity=0.291  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~  207 (364)
                      .+++++|+|++|++|..+++.+...|++|+.+.+
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~   40 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHY   40 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEec
Confidence            4678999999999999999999999999777643

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=93.67  E-value=1.1  Score=36.46  Aligned_cols=87  Identities=20%  Similarity=0.179  Sum_probs=58.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHH--
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL--  253 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~--  253 (364)
                      +|-+.| .|.+|...++-+...|.+|++..++.++ +.+.+.|+. .. .+..++.+   . .|+||-|+........  
T Consensus         3 ~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~-~~-~s~~e~~~---~-~dvvi~~v~~~~~v~~v~   75 (163)
T PF03446_consen    3 KIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAE-VA-DSPAEAAE---Q-ADVVILCVPDDDAVEAVL   75 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEE-EE-SSHHHHHH---H-BSEEEE-SSSHHHHHHHH
T ss_pred             EEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhh-hh-hhhhhHhh---c-ccceEeecccchhhhhhh
Confidence            688899 8999999999999999999998877665 666767743 22 22233333   3 8999999998645444  


Q ss_pred             ----HHhhccCCCEEEEEccC
Q 017901          254 ----GLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       254 ----~~~~l~~~G~~v~~g~~  270 (364)
                          .+..++++..+|.++..
T Consensus        76 ~~~~i~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-SS-
T ss_pred             hhhHHhhccccceEEEecCCc
Confidence                45556778888888654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.66  E-value=0.58  Score=44.02  Aligned_cols=93  Identities=19%  Similarity=0.268  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      -.+.++++.| +|-+|.+++..+...|.+ ++.+.|+.++  +++.++|+. ++..  +++.+.+.. +|+||.++|.+.
T Consensus       176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l--~el~~~l~~-~DvVissTsa~~  250 (414)
T COG0373         176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVAL--EELLEALAE-ADVVISSTSAPH  250 (414)
T ss_pred             cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecH--HHHHHhhhh-CCEEEEecCCCc
Confidence            4678999999 899999999999999974 5555666554  678999954 3322  234444445 999999999873


Q ss_pred             h---HHHHHhhccCCC--EEEEEccC
Q 017901          250 T---ERLGLNFLKRGG--HYMTLHGE  270 (364)
Q Consensus       250 ~---~~~~~~~l~~~G--~~v~~g~~  270 (364)
                      .   .....+.++..-  -+|.++.+
T Consensus       251 ~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         251 PIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             cccCHHHHHHHHhcccCeEEEEecCC
Confidence            2   234444444433  35555554

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=93.65  E-value=0.31  Score=40.06  Aligned_cols=94  Identities=18%  Similarity=0.200  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC-------------------C--ChhHHH
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY-------------------S--SKDIEL  232 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~-------------------~--~~~~~~  232 (364)
                      .-+|+|.| +|.+|..|+++++.+|++|+........ +.....++..+...                   .  ...+.+
T Consensus        20 p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            36789999 8999999999999999999999766554 56667776543321                   0  113444


Q ss_pred             HhcCCccEEEECC---CC--ch-hHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTI---GA--PE-TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~---g~--~~-~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.. +|++|-+.   +.  +. .....++.|+++..++.+...
T Consensus        99 ~i~~-~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D  141 (168)
T PF01262_consen   99 FIAP-ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD  141 (168)
T ss_dssp             HHHH--SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred             HHhh-CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence            4445 89988532   21  11 236888999999999988654

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK08618 ornithine cyclodeaminase; Validated

Probab=93.64  E-value=0.62  Score=42.85  Aligned_cols=91  Identities=14%  Similarity=0.132  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHcCCe-EEEeeCCccH--HHHHH----cCCceeeeCCChhHHHHhcCCccEEEEC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFS-VASGCH-VSATCGSKSI--DRVLA----AGAEQAVDYSSKDIELAIKGKFDAVLDT  244 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a-~~~g~~-vi~~~~~~~~--~~~~~----~g~~~v~~~~~~~~~~~i~g~~D~vid~  244 (364)
                      +..++++|.| +|..|...+..+ ...+++ |....++.++  +++.+    .+.. +..++  +..+.+.+ .|+|+.|
T Consensus       125 ~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~--~~~~~~~~-aDiVi~a  199 (325)
T PRK08618        125 EDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN--SADEAIEE-ADIIVTV  199 (325)
T ss_pred             CCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC--CHHHHHhc-CCEEEEc
Confidence            4567899999 899998777554 455775 4444555443  33333    3433 22222  23444445 9999999


Q ss_pred             CCCchhHHHHHhhccCCCEEEEEccC
Q 017901          245 IGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       245 ~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +++...+ .. +++++|-+++.+|..
T Consensus       200 T~s~~p~-i~-~~l~~G~hV~~iGs~  223 (325)
T PRK08618        200 TNAKTPV-FS-EKLKKGVHINAVGSF  223 (325)
T ss_pred             cCCCCcc-hH-HhcCCCcEEEecCCC
Confidence            9987333 34 899999999999865

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=93.63  E-value=0.4  Score=42.92  Aligned_cols=91  Identities=14%  Similarity=0.175  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCce----eeeCCChhHHHHhcCCccEEEECC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQ----AVDYSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~----v~~~~~~~~~~~i~g~~D~vid~~  245 (364)
                      .+|++++|.| +|+.+.+++..++..|+ +++.+.|+.++  +++..++...    .....+.+..+   . +|++|+|+
T Consensus       124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~---~-~dliINaT  198 (283)
T COG0169         124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE---E-ADLLINAT  198 (283)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc---c-cCEEEECC
Confidence            4589999999 79999999999999996 67777776654  3444444211    11111111111   2 89999998


Q ss_pred             CCchhHH-----HHHhhccCCCEEEEEc
Q 017901          246 GAPETER-----LGLNFLKRGGHYMTLH  268 (364)
Q Consensus       246 g~~~~~~-----~~~~~l~~~G~~v~~g  268 (364)
                      +..-.-.     ....++++.-.+..+-
T Consensus       199 p~Gm~~~~~~~~~~~~~l~~~~~v~D~v  226 (283)
T COG0169         199 PVGMAGPEGDSPVPAELLPKGAIVYDVV  226 (283)
T ss_pred             CCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence            7531110     1145666766666664

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.60  E-value=0.6  Score=42.97  Aligned_cols=91  Identities=25%  Similarity=0.285  Sum_probs=63.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce------eee---CCChhHHHHhcCCccEEEECC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ------AVD---YSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~------v~~---~~~~~~~~~i~g~~D~vid~~  245 (364)
                      .+|.|.| .|.+|.+.+..+...|.+|....+++++ +.+.+.+.+.      .+.   ....+..+.+.. +|+||-|+
T Consensus         5 m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~-aD~Vi~~v   82 (328)
T PRK14618          5 MRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAG-ADFAVVAV   82 (328)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcC-CCEEEEEC
Confidence            4689999 8999999999998889999988886554 4444432110      000   011233444445 99999999


Q ss_pred             CCchhHHHHHhhccCCCEEEEEcc
Q 017901          246 GAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       246 g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ... .+...++.++++-.++.+..
T Consensus        83 ~~~-~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         83 PSK-ALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             chH-HHHHHHHhcCcCCEEEEEee
Confidence            998 67888888888877776653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=93.58  E-value=0.37  Score=49.06  Aligned_cols=74  Identities=22%  Similarity=0.351  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHH----cCCce----eeeCCChh-HH---HHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLA----AGAEQ----AVDYSSKD-IE---LAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~----~g~~~----v~~~~~~~-~~---~~i~---g  236 (364)
                      .+++++|+|++|++|..+++.+...|++|+.+.++.+. + ...+    .+...    ..|..+.+ +.   +.+.   |
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999876543 2 1222    22211    22333332 22   2221   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus       493 ~iDilV~nAG~  503 (676)
T TIGR02632       493 GVDIVVNNAGI  503 (676)
T ss_pred             CCcEEEECCCC
Confidence            59999999985

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.47  E-value=0.26  Score=39.51  Aligned_cols=90  Identities=17%  Similarity=0.228  Sum_probs=58.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeC-------CC-hhHH-HHhcCCccEEEECCCCc
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDY-------SS-KDIE-LAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~-------~~-~~~~-~~i~g~~D~vid~~g~~  248 (364)
                      |+|.| +|.+|...+..++..|.+|..+.+++..+..++.|.......       .. .... ... +++|++|-|+-+.
T Consensus         1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~viv~vKa~   78 (151)
T PF02558_consen    1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSPRLEAIKEQGLTITGPDGDETVQPPIVISAPSADA-GPYDLVIVAVKAY   78 (151)
T ss_dssp             EEEES-TSHHHHHHHHHHHHTTCEEEEEESHHHHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHH-STESEEEE-SSGG
T ss_pred             CEEEC-cCHHHHHHHHHHHHCCCceEEEEccccHHhhhheeEEEEecccceecccccccCcchhcc-CCCcEEEEEeccc
Confidence            67889 899999998888889999999999884465666664311111       00 0011 122 3499999999875


Q ss_pred             ---hhHHHHHhhccCCCEEEEEcc
Q 017901          249 ---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       249 ---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                         ..++.+...+.++..++++.+
T Consensus        79 ~~~~~l~~l~~~~~~~t~iv~~qN  102 (151)
T PF02558_consen   79 QLEQALQSLKPYLDPNTTIVSLQN  102 (151)
T ss_dssp             GHHHHHHHHCTGEETTEEEEEESS
T ss_pred             chHHHHHHHhhccCCCcEEEEEeC
Confidence               234455556666777777754

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=93.45  E-value=0.21  Score=46.19  Aligned_cols=88  Identities=18%  Similarity=0.248  Sum_probs=53.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeE---EEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHV---SATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~v---i~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~  252 (364)
                      +|.|.||+|.+|..+++++...+..+   ..+.+.... ..+...|.+.++..-+   ...+.+ +|++|.|+|...+..
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~---~~~~~~-~D~v~~a~g~~~s~~   76 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK---IESFEG-IDIALFSAGGSVSKE   76 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC---hHHhcC-CCEEEECCCHHHHHH
Confidence            47899999999999999998865543   333343322 2222223332332111   122345 999999999985555


Q ss_pred             HHHhhccCCCEEEEEc
Q 017901          253 LGLNFLKRGGHYMTLH  268 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g  268 (364)
                      .+-++++.|-++|...
T Consensus        77 ~a~~~~~~G~~VID~s   92 (339)
T TIGR01296        77 FAPKAAKCGAIVIDNT   92 (339)
T ss_pred             HHHHHHHCCCEEEECC
Confidence            5555556666676555

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=93.43  E-value=0.17  Score=38.71  Aligned_cols=83  Identities=16%  Similarity=0.107  Sum_probs=50.4

Q ss_pred             CchHHHHHHHHHHHc----CCeEEEeeCCcc---HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHHh
Q 017901          184 GGAVGFAAVQFSVAS----GCHVSATCGSKS---IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLN  256 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~----g~~vi~~~~~~~---~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~  256 (364)
                      .|.+|...+...+..    +.++.+++.+..   ............. .+-+++.+.. . .|+|+||.+.......+.+
T Consensus         2 ~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~dvvVE~t~~~~~~~~~~~   78 (117)
T PF03447_consen    2 FGNVGRGLLEQLKEQQERIDLEVVGVADRSMLISKDWAASFPDEAFT-TDLEELIDDP-D-IDVVVECTSSEAVAEYYEK   78 (117)
T ss_dssp             -SHHHHHHHHHHHHTHHHCEEEEEEEEESSEEEETTHHHHHTHSCEE-SSHHHHHTHT-T--SEEEE-SSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhCcccCCEEEEEEEECCchhhhhhhhhccccccc-CCHHHHhcCc-C-CCEEEECCCchHHHHHHHH
Confidence            799999998888765    568888865541   1222222221121 2222333322 3 9999999877766677889


Q ss_pred             hccCCCEEEEEcc
Q 017901          257 FLKRGGHYMTLHG  269 (364)
Q Consensus       257 ~l~~~G~~v~~g~  269 (364)
                      +|+.|=.+|+...
T Consensus        79 ~L~~G~~VVt~nk   91 (117)
T PF03447_consen   79 ALERGKHVVTANK   91 (117)
T ss_dssp             HHHTTCEEEES-H
T ss_pred             HHHCCCeEEEECH
Confidence            9999989988853

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=93.43  E-value=1.3  Score=32.38  Aligned_cols=84  Identities=20%  Similarity=0.223  Sum_probs=53.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CeEEEe-eCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG---CHVSAT-CGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g---~~vi~~-~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      ++.+.| .|.+|.+.++-+...|   .+|+.+ .++.++  ++.++.+.... ..+.   .+.+.. .|+||-|+... .
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~---~~~~~~-advvilav~p~-~   73 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQAT-ADDN---EEAAQE-ADVVILAVKPQ-Q   73 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEE-SEEH---HHHHHH-TSEEEE-S-GG-G
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccc-cCCh---HHhhcc-CCEEEEEECHH-H
Confidence            466778 8999999999999999   788855 666654  45567775422 2122   333333 89999999987 4


Q ss_pred             HHHHHh---hccCCCEEEEE
Q 017901          251 ERLGLN---FLKRGGHYMTL  267 (364)
Q Consensus       251 ~~~~~~---~l~~~G~~v~~  267 (364)
                      +...++   ...++..+|.+
T Consensus        74 ~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   74 LPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             HHHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHHhhccCCCEEEEe
Confidence            444443   34566666665

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=93.42  E-value=1.2  Score=36.04  Aligned_cols=89  Identities=26%  Similarity=0.258  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP---  248 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~---  248 (364)
                      .+++|.|.| -|..|.+.++-+|..|.+|+...++..  .+.+++-|.. +.     +..+.++. .|+|+-.+...   
T Consensus         3 ~~k~IAViG-yGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~-v~-----~~~eAv~~-aDvV~~L~PD~~q~   74 (165)
T PF07991_consen    3 KGKTIAVIG-YGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFE-VM-----SVAEAVKK-ADVVMLLLPDEVQP   74 (165)
T ss_dssp             CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-E-CC-----EHHHHHHC--SEEEE-S-HHHHH
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCe-ec-----cHHHHHhh-CCEEEEeCChHHHH
Confidence            478999999 789999999999999999998877665  3778888875 32     35556655 99999999875   


Q ss_pred             hhH-HHHHhhccCCCEEEEEccC
Q 017901          249 ETE-RLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       249 ~~~-~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..+ ......|++|-.+++..+.
T Consensus        75 ~vy~~~I~p~l~~G~~L~fahGf   97 (165)
T PF07991_consen   75 EVYEEEIAPNLKPGATLVFAHGF   97 (165)
T ss_dssp             HHHHHHHHHHS-TT-EEEESSSH
T ss_pred             HHHHHHHHhhCCCCCEEEeCCcc
Confidence            233 4555688999888776554

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=93.40  E-value=2.9  Score=36.67  Aligned_cols=96  Identities=15%  Similarity=0.149  Sum_probs=58.7

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC-ceeeeCCChhHHHHhcCCccEEEECCCC
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA-EQAVDYSSKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~-~~v~~~~~~~~~~~i~g~~D~vid~~g~  247 (364)
                      ....++.+||-.| +|. |..+..+++ .|.+|+++..+++. +.+++... ...+..+..++. .-.+.+|+|+....-
T Consensus        38 l~~~~~~~vLDiG-cG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~V~s~~~l  113 (251)
T PRK10258         38 LPQRKFTHVLDAG-CGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESLP-LATATFDLAWSNLAV  113 (251)
T ss_pred             cCccCCCeEEEee-CCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCc-CCCCcEEEEEECchh
Confidence            3344678899998 453 666655554 58899999777664 55555432 122222211111 001349999875431


Q ss_pred             ------chhHHHHHhhccCCCEEEEEcc
Q 017901          248 ------PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       248 ------~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                            ...+..+.+.|++||.++....
T Consensus       114 ~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        114 QWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             hhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence                  2367889999999999987653

>PRK08219 short chain dehydrogenase; Provisional

Probab=93.39  E-value=0.48  Score=40.63  Aligned_cols=71  Identities=15%  Similarity=0.255  Sum_probs=46.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceee--eCCCh-hHHHHhc--CCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAV--DYSSK-DIELAIK--GKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~--~~~~~-~~~~~i~--g~~D~vid~~g~  247 (364)
                      ++++|.||+|.+|..++..+... .+|+++.++... +.+. +....+++  |..+. ++...+.  +++|.+|.+.|.
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            57999999999999999888777 899999887543 2222 22111222  33332 2223222  249999999885

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.39  E-value=0.86  Score=41.97  Aligned_cols=86  Identities=17%  Similarity=0.270  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|.+|.|.| .|.+|..+++.++.+|.+|++..+..+...    ...   .+ ..++.+.+.. .|+|+.++.....   
T Consensus       145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~----~~~---~~-~~~l~ell~~-aDiVil~lP~t~~t~~  214 (330)
T PRK12480        145 KNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDL----DFL---TY-KDSVKEAIKD-ADIISLHVPANKESYH  214 (330)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhh----hhh---hc-cCCHHHHHhc-CCEEEEeCCCcHHHHH
Confidence            567899999 899999999999999999999876654321    000   01 1234444445 8999999886521   


Q ss_pred             --HHHHHhhccCCCEEEEEcc
Q 017901          251 --ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~  269 (364)
                        ....+..++++..+|.++-
T Consensus       215 li~~~~l~~mk~gavlIN~aR  235 (330)
T PRK12480        215 LFDKAMFDHVKKGAILVNAAR  235 (330)
T ss_pred             HHhHHHHhcCCCCcEEEEcCC
Confidence              2456678899998888874

>PRK05599 hypothetical protein; Provisional

Probab=93.39  E-value=0.38  Score=42.18  Aligned_cols=70  Identities=16%  Similarity=0.249  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc--ee--eeCCCh----hHHHHhc---CCccE
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE--QA--VDYSSK----DIELAIK---GKFDA  240 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~--~v--~~~~~~----~~~~~i~---g~~D~  240 (364)
                      +++|+|+++++|...++.+. .|++|+.+.++++.  +.   +++.|.+  ..  .|..+.    .+.+.+.   |++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999988776 59999998876543  22   3334432  12  233332    2222222   56999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      ++.+.|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9998875

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=93.38  E-value=0.68  Score=46.03  Aligned_cols=92  Identities=15%  Similarity=0.070  Sum_probs=64.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHHhc-CCccEEEECCCCchh--
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPET--  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~i~-g~~D~vid~~g~~~~--  250 (364)
                      ++++|.| .|.+|+..++.++..|.+++++..++++ +.+++.|...+. |..+++..++.. .++|.++-+++++..  
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~  496 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAG  496 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHH
Confidence            6789999 8999999999999999999999887776 777888876443 333444444443 349988888877522  


Q ss_pred             -HHHHHhhccCCCEEEEEc
Q 017901          251 -ERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       251 -~~~~~~~l~~~G~~v~~g  268 (364)
                       +-.+.+...+.-+++...
T Consensus       497 ~iv~~~~~~~~~~~iiar~  515 (558)
T PRK10669        497 EIVASAREKRPDIEIIARA  515 (558)
T ss_pred             HHHHHHHHHCCCCeEEEEE
Confidence             223445556666777654

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=93.35  E-value=0.62  Score=39.41  Aligned_cols=97  Identities=20%  Similarity=0.218  Sum_probs=58.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCceeeeCCChhHHHH-hcCCccEE
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAVDYSSKDIELA-IKGKFDAV  241 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~v~~~~~~~~~~~-i~g~~D~v  241 (364)
                      +.....++.+||-.| +| .|..+..+++. |.+|+++..++.. +.    +...+...+ +....++.+. ..+++|+|
T Consensus        24 ~~l~~~~~~~vLDiG-cG-~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~~~~~~fD~I   99 (197)
T PRK11207         24 EAVKVVKPGKTLDLG-CG-NGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNLTFDGEYDFI   99 (197)
T ss_pred             HhcccCCCCcEEEEC-CC-CCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhCCcCCCcCEE
Confidence            334456778899998 33 47788888875 8899999776543 32    333333211 1111111111 12349999


Q ss_pred             EECCC----C----chhHHHHHhhccCCCEEEEEc
Q 017901          242 LDTIG----A----PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       242 id~~g----~----~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +.+..    .    ...+..+.++|++||.++.+.
T Consensus       100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207        100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            87543    1    135778889999999965543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.35  E-value=0.49  Score=41.48  Aligned_cols=72  Identities=21%  Similarity=0.309  Sum_probs=47.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HH---HHHcCCc-ee--eeCCChh----HHHHhc---CCcc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DR---VLAAGAE-QA--VDYSSKD----IELAIK---GKFD  239 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~---~~~~g~~-~v--~~~~~~~----~~~~i~---g~~D  239 (364)
                      ++++|+|++|.+|..+++.+...|++|+.+.+....   ..   ++..+.. .+  .|..+.+    +.+.+.   +++|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999999999998765321   11   2222322 12  2333322    222332   4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99999874

>PRK06101 short chain dehydrogenase; Provisional

Probab=93.34  E-value=0.35  Score=42.10  Aligned_cols=36  Identities=19%  Similarity=0.242  Sum_probs=31.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      .+++|+||+|++|...+..+...|++|+++.++++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~   37 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV   37 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            468999999999999888888899999999887654

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=93.33  E-value=0.91  Score=39.09  Aligned_cols=90  Identities=14%  Similarity=0.134  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc--cHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~  251 (364)
                      .+.+|||.| +|.++.-=++.+...|++|++++..-  +...+.+.|.-..+. ..-+ ...+.| +++||.|++.+ .+
T Consensus        24 ~~~~VLVVG-GG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~-r~~~-~~dl~g-~~LViaATdD~-~v   98 (223)
T PRK05562         24 NKIKVLIIG-GGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIK-GNYD-KEFIKD-KHLIVIATDDE-KL   98 (223)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-CCCC-hHHhCC-CcEEEECCCCH-HH
Confidence            477899999 79999888888888999988885432  322232333222221 1101 122346 99999999998 55


Q ss_pred             HHHH-hhccCCCEEEEEc
Q 017901          252 RLGL-NFLKRGGHYMTLH  268 (364)
Q Consensus       252 ~~~~-~~l~~~G~~v~~g  268 (364)
                      +..+ ...+..+.++...
T Consensus        99 N~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         99 NNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             HHHHHHHHHHcCCeEEEc
Confidence            5444 4444546666554

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.33  E-value=0.55  Score=40.73  Aligned_cols=73  Identities=29%  Similarity=0.367  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H-H---HHHcCCc-ee--eeCCChh-HHH---Hhc---CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D-R---VLAAGAE-QA--VDYSSKD-IEL---AIK---GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~-~---~~~~g~~-~v--~~~~~~~-~~~---~i~---g~~  238 (364)
                      ..+++|.|++|.+|..+++.+...|.+|+.+.++...  + .   ....+.. +.  .|..+.+ +.+   .+.   +++
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   85 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999998877655432  1 1   2223322 12  2333322 222   221   348


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |.+|.+.|.
T Consensus        86 d~vi~~ag~   94 (249)
T PRK12825         86 DILVNNAGI   94 (249)
T ss_pred             CEEEECCcc
Confidence            999999883

>PLN02366 spermidine synthase

Probab=93.32  E-value=2.8  Score=38.11  Aligned_cols=95  Identities=18%  Similarity=0.160  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcC------C-c---eeeeCCChhHHHHh-cCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAG------A-E---QAVDYSSKDIELAI-KGKFD  239 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g------~-~---~v~~~~~~~~~~~i-~g~~D  239 (364)
                      .+.++||+.|+ |. |.++..++++.+. +|..+.-+++. +.+++.-      . +   .++..+...+.+.. .+++|
T Consensus        90 ~~pkrVLiIGg-G~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD  167 (308)
T PLN02366         90 PNPKKVLVVGG-GD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD  167 (308)
T ss_pred             CCCCeEEEEcC-Cc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence            56789999994 33 6677788887654 67777555542 4443321      1 1   12222222333333 24599


Q ss_pred             EEEECCCCc----------hhHHHHHhhccCCCEEEEEcc
Q 017901          240 AVLDTIGAP----------ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       240 ~vid~~g~~----------~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +||--...+          ..+..+.++|+++|.++.-..
T Consensus       168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~~  207 (308)
T PLN02366        168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAE  207 (308)
T ss_pred             EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECcC
Confidence            987643321          246788999999999986543

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=93.30  E-value=1.2  Score=37.19  Aligned_cols=96  Identities=16%  Similarity=0.231  Sum_probs=60.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHH----HHcCCce--eeeCCChhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV----LAAGAEQ--AVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~----~~~g~~~--v~~~~~~~~~~~i~g~~D  239 (364)
                      ....+.+++++|=.| +| .|..++.+++.. +.+|+++..+++. +.+    ...+...  ++..+   ......+++|
T Consensus        25 ~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d---~~~~~~~~~D   99 (187)
T PRK08287         25 SKLELHRAKHLIDVG-AG-TGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE---APIELPGKAD   99 (187)
T ss_pred             HhcCCCCCCEEEEEC-Cc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC---chhhcCcCCC
Confidence            455677889998888 33 477777778765 4689999776653 332    3444332  22221   1112223499


Q ss_pred             EEEECCCC---chhHHHHHhhccCCCEEEEEc
Q 017901          240 AVLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       240 ~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+.....   ...+..+.+.|+++|+++...
T Consensus       100 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~  131 (187)
T PRK08287        100 AIFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF  131 (187)
T ss_pred             EEEECCCccCHHHHHHHHHHhcCCCeEEEEEE
Confidence            99864321   235678899999999997753

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=93.28  E-value=0.33  Score=49.31  Aligned_cols=73  Identities=25%  Similarity=0.253  Sum_probs=48.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHc-CCceee--eCCC-hhH-HHHhcCCccEEEEC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAA-GAEQAV--DYSS-KDI-ELAIKGKFDAVLDT  244 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~-g~~~v~--~~~~-~~~-~~~i~g~~D~vid~  244 (364)
                      .+++.+|||+||+|.+|..+++.+... |.+|+++.+.... ...... +.. .+  |..+ ..+ .+.+.+ +|+||.+
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~gDl~d~~~~l~~~l~~-~D~ViHl  389 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFH-FVEGDISIHSEWIEYHIKK-CDVVLPL  389 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceE-EEeccccCcHHHHHHHhcC-CCEEEEC
Confidence            356788999999999999999988875 7899999875542 111111 222 22  2222 222 333456 9999998


Q ss_pred             CC
Q 017901          245 IG  246 (364)
Q Consensus       245 ~g  246 (364)
                      ++
T Consensus       390 Aa  391 (660)
T PRK08125        390 VA  391 (660)
T ss_pred             cc
Confidence            76

>PLN00198 anthocyanidin reductase; Provisional

Probab=93.28  E-value=0.45  Score=43.87  Aligned_cols=71  Identities=21%  Similarity=0.328  Sum_probs=47.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHc---CCceee--eCCCh-hHHHHhcCCccEEEEC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAA---GAEQAV--DYSSK-DIELAIKGKFDAVLDT  244 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~---g~~~v~--~~~~~-~~~~~i~g~~D~vid~  244 (364)
                      +.+|+|+||+|.+|..+++.+...|++|++++++... ..   ...+   +.-.++  |..+. .+...+.+ +|+||.+
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~vih~   87 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAG-CDLVFHV   87 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhc-CCEEEEe
Confidence            6789999999999999999999999999888765432 11   1111   111222  33333 33444445 9999998


Q ss_pred             CC
Q 017901          245 IG  246 (364)
Q Consensus       245 ~g  246 (364)
                      .+
T Consensus        88 A~   89 (338)
T PLN00198         88 AT   89 (338)
T ss_pred             CC
Confidence            87

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=93.26  E-value=1  Score=41.22  Aligned_cols=88  Identities=23%  Similarity=0.211  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET-  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~-  250 (364)
                      .+++|.|.| .|.+|.+.++-++..|.+|++..++..  ...+.+.|.. +.     +..+.+.. .|+|+-++..... 
T Consensus        16 ~gktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~-~~-----s~~eaa~~-ADVVvLaVPd~~~~   87 (330)
T PRK05479         16 KGKKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFE-VL-----TVAEAAKW-ADVIMILLPDEVQA   87 (330)
T ss_pred             CCCEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCe-eC-----CHHHHHhc-CCEEEEcCCHHHHH
Confidence            578899999 899999999999999999887655433  2556666653 21     33444444 8999999997522 


Q ss_pred             --H-HHHHhhccCCCEEEEEcc
Q 017901          251 --E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~-~~~~~~l~~~G~~v~~g~  269 (364)
                        + ......++++..++...+
T Consensus        88 ~V~~~~I~~~Lk~g~iL~~a~G  109 (330)
T PRK05479         88 EVYEEEIEPNLKEGAALAFAHG  109 (330)
T ss_pred             HHHHHHHHhcCCCCCEEEECCC
Confidence              2 234445667766654443

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.25  E-value=0.45  Score=41.93  Aligned_cols=33  Identities=18%  Similarity=0.217  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEee
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATC  206 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~  206 (364)
                      .|++++|+|++  +++|..+++.+...|++|+.+.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~   39 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY   39 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence            57899999987  4899999999999999998864

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=93.24  E-value=1.4  Score=34.21  Aligned_cols=89  Identities=19%  Similarity=0.201  Sum_probs=50.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCeEEEe-eCCcc----HHHHHHcCCc--eeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVA-SGCHVSAT-CGSKS----IDRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~-~g~~vi~~-~~~~~----~~~~~~~g~~--~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      +|.|+|++|.+|...++.+.. .+.++.+. .++..    ++.-.-.|..  .+.-+  .++.+.+.. +|++||++..+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~--~~l~~~~~~-~DVvIDfT~p~   78 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT--DDLEELLEE-ADVVIDFTNPD   78 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB--S-HHHHTTH--SEEEEES-HH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc--hhHHHhccc-CCEEEEcCChH
Confidence            589999779999999999988 57787776 44431    1111112211  11111  234444434 99999999554


Q ss_pred             hhHHHHHhhccCCCEEEEEcc
Q 017901          249 ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~  269 (364)
                       .....++.+...|.-+.+|-
T Consensus        79 -~~~~~~~~~~~~g~~~ViGT   98 (124)
T PF01113_consen   79 -AVYDNLEYALKHGVPLVIGT   98 (124)
T ss_dssp             -HHHHHHHHHHHHT-EEEEE-
T ss_pred             -HhHHHHHHHHhCCCCEEEEC
Confidence             55555555555566666654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=93.22  E-value=0.52  Score=41.89  Aligned_cols=102  Identities=15%  Similarity=0.267  Sum_probs=63.1

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc-eeeeCCChhHHH-Hhc-CCccEE
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKDIEL-AIK-GKFDAV  241 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~~~-~i~-g~~D~v  241 (364)
                      +.....+.++.+||=.| +| .|..+..+++..+++|+++..++.. +.+++.... .-+.....++.+ ... +.+|+|
T Consensus        44 ~l~~l~l~~~~~VLDiG-cG-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V  121 (263)
T PTZ00098         44 ILSDIELNENSKVLDIG-SG-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMI  121 (263)
T ss_pred             HHHhCCCCCCCEEEEEc-CC-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEE
Confidence            33667889999999998 44 4666777777778999999776654 444432211 111111111111 011 349999


Q ss_pred             EEC-----CC--C-chhHHHHHhhccCCCEEEEEcc
Q 017901          242 LDT-----IG--A-PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       242 id~-----~g--~-~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +..     .+  . ...+..+.+.|+|||+++....
T Consensus       122 ~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        122 YSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            862     12  1 2367888999999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	364
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		5e-42
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		2e-23
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		2e-23
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		4e-23
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		4e-20
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		1e-18
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		1e-14
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		8e-13
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		2e-12
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		6e-12
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		7e-12
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		9e-12
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		1e-11
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		2e-11
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		1e-09
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		1e-09
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		2e-09
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-09
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-09
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-09
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		2e-09
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		2e-09
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-09
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		1e-08
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-08
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		1e-07
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		2e-07
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		9e-07
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-06
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		2e-06
1n9g_A	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		9e-06
1n9g_B	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		1e-05
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		2e-05
1h0k_A	364	Enoyl Thioester Reductase 2 Length = 364		2e-05
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		3e-05
1gu7_A	364	Enoyl Thioester Reductase From Candida Tropicalis L		4e-05
1gyr_A	364	Mutant Form Of Enoyl Thioester Reductase From Candi		4e-05
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		5e-05
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		5e-05
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		6e-05
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		1e-04
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		3e-04
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		4e-04
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		4e-04
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		6e-04
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		7e-04

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score =  168 bits (425), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 180/353 (50%), Gaps = 24/353 (6%)
Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----E 85
           A V+ ++G  EVL    N+ +P +  PNEV+V+  A S+NP+D  MRSGYG +      +
Sbjct: 24  AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 86  PL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE 137
           PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++ V+S 
Sbjct: 84  PLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEFVVVSG 142
Query: 138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQ 193
           +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R               Q
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ 202
Query: 194 FSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPETE 251
              A   HV+A C   + + V   GA+  +DY S  +E  +K    FD +LD +G   TE
Sbjct: 203 VMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG-STE 261
Query: 252 RLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI 309
               +FLK+  G  Y+TL        D  G+A G+ + T V +  +    +  G+ Y + 
Sbjct: 262 TWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKALKHFWKGVHYRWA 320
Query: 310 YMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
           +  A    L++I  L + GK++  +++TF  ++V EA    ++    GK V+ 
Sbjct: 321 FFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVIN 373

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 156/339 (46%), Gaps = 33/339 (9%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG--RSIFEPL 87
           +A+   +FG P+VL++  +   P+ + N+ L++  A S+NP+D + R+G G      +  
Sbjct: 8   KAIQFDQFGPPKVLKL-VDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66
Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGAL----HPTAVRGTYADYAVLSEDELTPK 143
           LP  LG D SGEV  +G+ V ++ +G +V G      HP      YA+Y   S D +  K
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCC----YAEYVCASPDTIIQK 122
Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVS 203
              ++   A+++P A LTA +AL   A + +G                 Q +   G  V 
Sbjct: 123 LEKLSFLQAASLPTAGLTALQALN-QAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVI 181
Query: 204 ATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
            T   ++   + A GAEQ ++Y  +D  LAI    DAV+D +G  +     ++ LK  G 
Sbjct: 182 TTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-DVGIQSIDCLKETGC 240
Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
            +++   TA                 V+   + +   ++G+   +     + E L  + +
Sbjct: 241 IVSVPTITAG---------------RVIEVAKQKHRRAFGLLKQF-----NIEELHYLGK 280
Query: 324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
           L    KL+I + + F +++   AHE  +   + GK+V +
Sbjct: 281 LVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFK 319

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 152/334 (45%), Gaps = 27/334 (8%)
Query: 24  LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI 83
           L T +  A V+    GP VL     +  P   P +VLV+  A   NPLD ++R+G     
Sbjct: 3   LTTPTXIAAVVEEANGPFVLR---KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHA 59
Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA-VRGTYADYAVLSEDELTP 142
            +PL P ILG D++G V AVG  V S  VG  VFG       ++GT+A +A +    L  
Sbjct: 60  QQPL-PAILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLAS 118
Query: 143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV 202
           KP ++T   AS +P   +TAW  L   A++ +GQ                Q ++A G  V
Sbjct: 119 KPAALTXRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARV 178
Query: 203 SATCGSKSIDRVLAAGA------EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLN 256
            AT     ++ V   GA       +  DY+++    A +G FD V DT+G P  +    +
Sbjct: 179 FATARGSDLEYVRDLGATPIDASREPEDYAAE--HTAGQG-FDLVYDTLGGPVLDA-SFS 234
Query: 257 FLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE 316
            +KR GH ++  G        +G     P++        + T ++   +    +     E
Sbjct: 235 AVKRFGHVVSCLG--------WGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHF---GE 283
Query: 317 GLEEIRRLSETGKLKIPVD-KTFHMTQVREAHEA 349
            L E   L +TGKL   +D +TF + ++  A++A
Sbjct: 284 XLREADALVQTGKLAPRLDPRTFSIAEIGSAYDA 317

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 158/375 (42%), Gaps = 77/375 (20%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAVV+   GGPEVLEV  ++ VP+  P EV VR +A ++N LD  +R G    +  P LP
Sbjct: 2   RAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKG----VASPKLP 56
Query: 90  L--ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAV---------------------- 125
           L  +LG D SG V AVG  V     G EV   ++P                         
Sbjct: 57  LPHVLGADGSGVVDAVGPGVEGFAPGDEVV--INPGLSCGRCERCLAGEDNLCPRYQILG 114
Query: 126 ---RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXX 182
               GTYA+Y VL E  L PKP +++  +A+AIP   LTAW+ +     +  G       
Sbjct: 115 EHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMA 174
Query: 183 XXXXXXXXXXQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----GK 237
                     Q +   G  V AT GS+  + R  A GA++ V+Y+  D    ++    GK
Sbjct: 175 AGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGK 234
Query: 238 -FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM 296
             D V+D  GA       L F   G    T +G   A+A                     
Sbjct: 235 GADKVVDHTGA-------LYF--EGVIKATANGGRIAIAG-------------------A 266
Query: 297 QTWYSYGIDYSYIYMR---------ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAH 347
            + Y   + +++++ R         A    L  I R  E GKLK  V +   +    E H
Sbjct: 267 SSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGH 326
Query: 348 EAKDKRLIPGKVVLE 362
              ++R + GKVVL+
Sbjct: 327 RLLEERRVFGKVVLQ 341

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAV +  FGGPEVL++R ++ VP  K ++VL++  A  +NP++T +RSG Y R   +PLL
Sbjct: 31  RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR---KPLL 87
Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P   G D++G + AVG +  +   G  VF +   + + G YA+YA+ ++  +   P  + 
Sbjct: 88  PYTPGSDVAGVIEAVGDNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLD 144
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS 208
               +AI     TA+RAL  +A +  G+                Q + A G  +  T G+
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT 204
Query: 209 KSIDR-VLAAGAEQAVDY 225
           +   + VL  GA +  ++
Sbjct: 205 EEGQKIVLQNGAHEVFNH 222

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 153/366 (41%), Gaps = 36/366 (9%)
Query: 9   SANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEV--RPNVEVPDLKPNEVLVRTRAV 66
           S  D     L F    +    R V L  FGGP+V  +  RP   +P     EVLVR  A+
Sbjct: 9   SGVDLGTENLYFQSXSLPQEXRFVDLKSFGGPDVXVIGKRP---LPVAGEGEVLVRAEAI 65
Query: 67  SINPLDTRMRSGYGRSIFEPL--LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA 124
            +N  D   R G     + P      ILG ++SGE+  VG  V    VG +V G     A
Sbjct: 66  GVNRPDIAQRQGS----YPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCG----LA 117
Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXX 184
             G YA+Y +L   ++ P P       A+A+P    T W  L   A ++EG+        
Sbjct: 118 NGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGLTEGESVLIHGGT 177
Query: 185 XXXXXXXXQFSVASGCHVSATCGS----KSIDRVLAAGAEQAVDYSSKDIELAIKGK--- 237
                   Q + A G  V AT GS    ++ +R+   GA++ ++Y S+D    IK +   
Sbjct: 178 SGIGTTAIQLARAFGAEVYATAGSTGKCEACERL---GAKRGINYRSEDFAAVIKAETGQ 234
Query: 238 -FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM 296
             D +LD IGA   ER  +  L + G    +     A+A+   L+   PI       KR+
Sbjct: 235 GVDIILDXIGAAYFER-NIASLAKDGCLSIIAFLGGAVAEKVNLS---PIXV-----KRL 285
Query: 297 QTWYSYGIDYSYIYMRADAEG-LEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLI 355
               S     +    RA  +  L E+  L E G +   + K F    V +AH   ++   
Sbjct: 286 TVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSH 345
Query: 356 PGKVVL 361
            GKV L
Sbjct: 346 VGKVXL 351

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 31/337 (9%)
Query: 36  RFGGPEVLEVRPNVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILG 93
           + GGPEVL+    VE     P  NE+ V  +A+ IN +DT +RSG       P LP  LG
Sbjct: 9   KHGGPEVLQA---VEFTPADPAENEIQVENKAIGINFIDTYIRSGL---YPPPSLPSGLG 62
Query: 94  RDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADAS 153
            + +G V+ VG+ V+ +  G  V   ++  +  G Y+    +  D+    P +++   A+
Sbjct: 63  TEAAGIVSKVGSGVKHIKAGDRV---VYAQSALGAYSSVHNIIADKAAILPAAISFEQAA 119
Query: 154 AIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-KSID 212
           A     LT +  L+    +   ++               Q++ A G  +  T G+ +   
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179
Query: 213 RVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
             L AGA Q ++Y  +D+     E+    K   V D++G    ER  L+ L+R G  ++ 
Sbjct: 180 SALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWER-SLDCLQRRGLMVSF 238
Query: 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-AEGLEEIRRLSE 326
              + A+    G+ LG       +L ++   + +      YI  R +  E   E+  L  
Sbjct: 239 GNSSGAVT---GVNLG-------ILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIA 288
Query: 327 TGKLKIPV--DKTFHMTQVREAHEAKDKRLIPGKVVL 361
           +G +K+ V   + + +   + AHE  + R   G  +L
Sbjct: 289 SGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 145/349 (41%), Gaps = 23/349 (6%)
Query: 24  LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI 83
           L   S  AV   + GGPE L V+  V  P     EVL++  A ++N  D   R G  +  
Sbjct: 18  LYFQSMLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQG--QYD 74
Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
             P    ILG + SG VA +G   +      +   AL P    G  A Y  + E  L P 
Sbjct: 75  PPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPG---GGQAQYVTVPEGLLMPI 131
Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVS 203
           P  +T   A+AIP A LTA++ L     +  G                 Q +  +G    
Sbjct: 132 PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPL 191
Query: 204 ATCGS-KSIDRVLAAGAEQAVDYSSKDIELA----IKGK-FDAVLDTIGAPETERLGLNF 257
            T GS K +      GA    +Y  +D   A     KG   + +LD IG    E+  +N 
Sbjct: 192 VTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK-NVNC 250
Query: 258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK-RMQTWYSYGIDYSYIYMRADAE 316
           L   G ++ L+G      D  G     P+ + +L K+  + T      D  Y  M  +A 
Sbjct: 251 LALDGRWV-LYGLMGG-GDING-----PLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAF 303
Query: 317 GLEEIRRLSETGKLK-IPV-DKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
             + +   S  G  + +PV D+ + +T+++EAH+  +     GK+VLE 
Sbjct: 304 TEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 143/342 (41%), Gaps = 23/342 (6%)
Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
           AV   + GGPE L V+  V  P     EVL++  A ++N  D   R G  +    P    
Sbjct: 9   AVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQG--QYDPPPGASN 65
Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHA 150
           ILG + SG VA +G   +      +   AL P    G  A Y  + E  L P P  +T  
Sbjct: 66  ILGLEASGHVAELGPGCQGHWKIGDTAMALLPG---GGQAQYVTVPEGLLMPIPEGLTLT 122
Query: 151 DASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-K 209
            A+AIP A LTA++ L     +  G                 Q +  +G     T GS K
Sbjct: 123 QAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK 182
Query: 210 SIDRVLAAGAEQAVDYSSKDIELA----IKGK-FDAVLDTIGAPETERLGLNFLKRGGHY 264
            +      GA    +Y  +D   A     KG   + +LD IG    E+  +N L   G +
Sbjct: 183 KLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK-NVNCLALDGRW 241
Query: 265 MTLHGETAALADHYGLALGLPIATTVLLKK-RMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
           + L+G      D  G     P+ + +L K+  + T      D  Y  M  +A   + +  
Sbjct: 242 V-LYGLMGG-GDING-----PLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 294
Query: 324 LSETGKLK-IPV-DKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
            S  G  + +PV D+ + +T+++EAH+  +     GK+VLE 
Sbjct: 295 FSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 336

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 38  GGPEVLE-VRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDI 96
           GGPEVLE V    E P   P  V+VR +A+ +N +DT  RSG   +   P LP  LG + 
Sbjct: 11  GGPEVLEYVDFEPEAPG--PQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEG 65
Query: 97  SGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156
           +G V AVG  V    VG  V    + T   G Y++  VL E  L     SV+   A+A+ 
Sbjct: 66  AGVVEAVGDEVTRFKVGDRV---AYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALM 122
Query: 157 FAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-KSIDRVL 215
              LT    L+   ++  G+                Q++ A G  +  T  S +      
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182
Query: 216 AAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIG 246
           A GA + +DYS +D+     EL    K   V D +G
Sbjct: 183 ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG 218

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 94/238 (39%), Gaps = 27/238 (11%)
Query: 52  PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT 111
           P L  ++V VR  AV+INP DT+MR  +            LG D +G V AVG+ V  + 
Sbjct: 32  PMLPRDQVYVRVEAVAINPSDTKMRGQFATPW------AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 112 VGQEVFGALHPTAVR----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
           VG  V+GA +    R    G ++ Y V         P  ++   A+A+P    TA  A+K
Sbjct: 86  VGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMK 145
Query: 168 C------------AARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVL 215
                            S+                  Q    SG    ATC   + D   
Sbjct: 146 LLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAK 205
Query: 216 AAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKR-GGHYMTLH 268
           + GAE+  DY + ++   I    K      LD I   E+       + R GGHY++L+
Sbjct: 206 SRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLN 263

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 135/340 (39%), Gaps = 51/340 (15%)
Query: 51  VPDLKPNEVLVRTRAVSINPLDTR-MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109
           VP+   ++++VRT AVS+N  D   + +G G  +  P +P     D SG V AVG SV  
Sbjct: 48  VPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVP---ASDXSGVVEAVGKSVTR 104
Query: 110 LTVGQ------------------------EVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
              G                         E  G  HP    G  ++Y VL E      P 
Sbjct: 105 FRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP----GVLSEYVVLPEGWFVAAPK 160
Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSAT 205
           S+  A+AS +P A LTAW AL     +  G R               Q + A+G  V  T
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDR-VVVQGTGGVALFGLQIAKATGAEVIVT 219
Query: 206 CGSKS-IDRVLAAGAEQAVDYSSKD-IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
             S+  +DR  A GA+  ++   +D +E       D   D I     E  G   L +   
Sbjct: 220 SSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI----LEIAGGAGLGQSLK 275
Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
            +   G  + +    G  +  P+   +LLK  +    S G      + RA  + +  + R
Sbjct: 276 AVAPDGRISVIGVLEGFEVSGPVG-PLLLKSPVVQGISVG------HRRALEDLVGAVDR 328
Query: 324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
           L     LK  +D  +  T+V EA    D+    GKVV+EF
Sbjct: 329 LG----LKPVIDXRYKFTEVPEALAHLDRGPF-GKVVIEF 363

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 103/241 (42%), Gaps = 19/241 (7%)
Query: 36  RFGGP-EVLEVR-PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLIL 92
           +FG P +VL+V   N+E   LK NEV VR     INP D    +G Y   I  P +P   
Sbjct: 12  KFGNPKDVLQVEYKNIE--PLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIP--- 66
Query: 93  GRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADA 152
           G +  G V  VGA V    +G+ V     P    GT+ +Y   S D + P P S+    A
Sbjct: 67  GYEGVGIVENVGAFVSRELIGKRVL----PLRGEGTWQEYVKTSADFVVPIPDSIDDFTA 122
Query: 153 SAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFS-VASGCHVSATCGSKSI 211
           + +    LTAW        +                    Q S + +   ++ T  +K  
Sbjct: 123 AQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT 182
Query: 212 DRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
           + +L  GA   +D S+  +     EL      DA +D+IG P+   L  + L+  GH++T
Sbjct: 183 EELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFS-LRPNGHFLT 241
Query: 267 L 267
           +
Sbjct: 242 I 242

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 93/238 (39%), Gaps = 27/238 (11%)
Query: 52  PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT 111
           P L  ++V VR  AV+INP DT MR  +            LG D +G V AVG+ V  + 
Sbjct: 32  PMLPRDQVYVRVEAVAINPSDTSMRGQFATPW------AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 112 VGQEVFGALHPTAVR----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
           VG  V+GA +    R    G ++ Y V         P  ++   A+A+P    TA  A+K
Sbjct: 86  VGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMK 145
Query: 168 C------------AARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVL 215
                            S+                  Q    SG    ATC   + D   
Sbjct: 146 LLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAK 205
Query: 216 AAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKR-GGHYMTLH 268
           + GAE+  DY + ++   I    K      LD I   E+       + R GGHY++L+
Sbjct: 206 SRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLN 263

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
           +V++P L  +++LV+ +A+ INP+D +       +     +P   G D +G +  VGA V
Sbjct: 21  SVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP---GVDGAGVIVKVGAKV 77
Query: 108 RSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
            S  +G+ V  A H +  R G++A++ VL+ D +   P +++   A+A+P   LTAW+A 
Sbjct: 78  DSKXLGRRV--AYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAF 135
Query: 167 K 167
           +
Sbjct: 136 E 136

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 23/340 (6%)
Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
           A V+ + GGP+   V   V+V    P +V +R  A+ +N LDT  R+G    +     P+
Sbjct: 4   AAVIHKKGGPDNF-VWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62
Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL--TPKPVSVT 148
           ++G + +  V  VG  V   TVG+ V   L P    G Y+   +   ++L   PK + + 
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPL---GAYSQERLYPAEKLIKVPKDLDLD 119
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS 208
               + +    +TA   L    ++  G                  ++   G  V  T  +
Sbjct: 120 DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST 179
Query: 209 -KSIDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
            +  +     G    ++YS++D    ++    GK  D V D+IG  +T +  L+ L+  G
Sbjct: 180 EEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPRG 238
Query: 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADA-EGLEEI 321
                +G  + +AD        PI     L  R   + +    + Y+  R++  EG + +
Sbjct: 239 -MCAAYGHASGVAD--------PIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCL 289
Query: 322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
               + G L   V KTF + +   AH+    R   G +VL
Sbjct: 290 FDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVL 329

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 41/348 (11%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           + +++   GG +V++   +  VP +   E+L++ +   +N +++  R G    I+    P
Sbjct: 10  KVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKG----IYPCEKP 64
Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
            +LGR+ SG V A G  V +  VG +V           T+A Y+ +S      K    T 
Sbjct: 65  YVLGREASGTVVAKGKGVTNFEVGDQV-----AYISNSTFAQYSKISSQGPVMKLPKGT- 118
Query: 150 ADASAIPFAA-----LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSA 204
           +D     +AA     LTA      A  + +G                 Q     G H  A
Sbjct: 119 SDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIA 178
Query: 205 TCGSKSIDRVLAA-GAEQAVDYSSKDIELAI----KGK-FDAVLDTIGAPETERLGLNFL 258
              +    ++    GAE  ++ S +DI   +     GK  DA  D++G  +T  + L  L
Sbjct: 179 VASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAAL 237
Query: 259 KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL 318
           KR G +++  G  + L   + +    P   T++   R Q        Y YI   AD E  
Sbjct: 238 KRKGVFVSF-GNASGLIPPFSITRLSPKNITLV---RPQL-------YGYI---ADPEEW 283
Query: 319 ----EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
               +E   L  + KL I + KT+ +   R A    + R   GK+VLE
Sbjct: 284 KYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLE 331

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41  EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
           E + +  +  VP     ++LVR R V +N  D    +G      +P  P  +G +  GEV
Sbjct: 38  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 95
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
            A+G S  +  TVGQ V   + P    G++A+Y V+     TP P      +   +  + 
Sbjct: 96  VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 148
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
            TA+ +LK    +SEG++               Q S  + CHV  TC S      L + G
Sbjct: 149 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 208
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
            ++ ++Y ++ +   +K ++    D V +++G 
Sbjct: 209 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 241

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41  EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
           E + +  +  VP     ++LVR R V +N  D    +G      +P  P  +G +  GEV
Sbjct: 17  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 74
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
            A+G S  +  TVGQ V   + P    G++A+Y V+     TP P      +   +  + 
Sbjct: 75  VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 127
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
            TA+ +LK    +SEG++               Q S  + CHV  TC S      L + G
Sbjct: 128 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 187
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
            ++ ++Y ++ +   +K ++    D V +++G 
Sbjct: 188 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 220

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41  EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
           E + +  +  VP     ++LVR R V +N  D    +G      +P  P  +G +  GEV
Sbjct: 46  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 103
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
            A+G S  +  TVGQ V   + P    G++A+Y V+     TP P      +   +  + 
Sbjct: 104 VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 156
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
            TA+ +LK    +SEG++               Q S  + CHV  TC S      L + G
Sbjct: 157 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 216
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
            ++ ++Y ++ +   +K ++    D V +++G 
Sbjct: 217 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 249

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
           N+++P+ K +E+LV+ +++S+NP+DT+ R     ++      P +LG D  G V +VG  
Sbjct: 24  NLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA------PRVLGFDAIGVVESVGNE 77
Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
           V     G  V+ +  P    G+ A+Y +++E  +   P +++   A ++P   +TA+  L
Sbjct: 78  VTMFNQGDIVYYSGSPDQ-NGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETL 136

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 105/250 (42%), Gaps = 27/250 (10%)
Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            +A VL R GGP  L   P    P+ +  EV++R  AV +N  D  MR G   +   P  
Sbjct: 1   MKAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-- 55
Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P I G ++ G             V    + AL P   +G  A+   + +  L P P  ++
Sbjct: 56  PFIPGMEVVG------------VVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
             +A+A P + LTA+ ALK  A+   G++               Q + A G  V +A   
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            + +   LA GAE+A  Y+         G  D VL+  G    E LGL  L  GG  + +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLVYI 217
Query: 268 ---HGETAAL 274
               GE A +
Sbjct: 218 GAAEGEVAPI 227

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            +A VL R GGP  L   P    P+ +  EV++R  AV +N  D  MR G   +   P  
Sbjct: 1   MKAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-- 55
Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P I G ++ G             V    + AL P   +G  A+   + +  L P P  ++
Sbjct: 56  PFIPGMEVVG------------VVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
             +A+A P + LTA+ ALK  A+   G++               Q + A G  V +A   
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
            + +   LA GAE+A  Y+         G  D VL+  G    E LGL  L  GG  +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLV 215

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 48  NVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105
           ++E+P   P  +++LV  +AVS+NP+D ++R        +     ++G D +G V+AVG 
Sbjct: 42  DIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK---VIGYDAAGIVSAVGP 98
Query: 106 SVRSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
            V     G EVF A   + +R GT A++ ++ E  +  KP ++  A+A+A+P  ++TAW 
Sbjct: 99  DVTLFRPGDEVFYA--GSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWE 156
Query: 165 AL 166
           A 
Sbjct: 157 AF 158

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 149/350 (42%), Gaps = 26/350 (7%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAVVL  FGG   L +     +P+ +  E+ +R +A  +N +D  +R G   +   P  P
Sbjct: 5   RAVVLAGFGGLNKLRLFRKA-MPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKTP 61
Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
           L+ G + SG V A+G SV+   +G  V   ++  A    +A+      + +   P  ++ 
Sbjct: 62  LVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNA----WAEVVCTPVEFVYKIPDDMSF 117
Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQF-SVASGCHVSATCGS 208
           ++A+A P   +TA+  L   A + EG                 Q  S      V  T  +
Sbjct: 118 SEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAST 177
Query: 209 ---KSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
              ++I   +    ++  DY  +   ++ +G  D VLD +    T + GL+ LK  G Y+
Sbjct: 178 FKHEAIKDSVTHLFDRNADYVQEVKRISAEG-VDIVLDCLCGDNTGK-GLSLLKPLGTYI 235
Query: 266 ------TLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL- 318
                  + GET +          +     + L +  +    + +  + ++ +  A GL 
Sbjct: 236 LYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSL-LNLLFKQGRA-GLI 293
Query: 319 ----EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
               E++  L    K+K  VD  + + +V+EA +    R   GK++L+ +
Sbjct: 294 RGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVE 343

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 30  RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL 87
           RA+V    G P +V+E++ N+E+  ++ ++V V+  A  INP D  M  G YG     P 
Sbjct: 28  RALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG---LLPE 83
Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP + G +   +V AVG++V  L  G  V  A    A  GT+   AV SE+ L   P  +
Sbjct: 84  LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA---NAGLGTWRTEAVFSEEALIQVPSDI 140
Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCG 207
               A+ +     TA+R L    ++  G                 Q + A G        
Sbjct: 141 PLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVR 200
Query: 208 -----SKSIDRVLAAGAEQAVDYSSKDIEL---AIKGKFDAV------LDTIGAPETERL 253
                 K  DR+ + GAE  +     + EL    +K  F  +      L+ +G   +  L
Sbjct: 201 DRPDIQKLSDRLKSLGAEHVI----TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 256
Query: 254 GLNFLKRGGHYMTLHG 269
            L  L RGG  +T  G
Sbjct: 257 -LRQLARGGTMVTYGG 271

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 30  RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL 87
           RA+V    G P +V+E++ N+E+  ++ ++V V+  A  INP D  M  G YG     P 
Sbjct: 15  RALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG---LLPE 70
Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP + G +   +V AVG++V  L  G  V  A    A  GT+   AV SE+ L   P  +
Sbjct: 71  LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA---NAGLGTWRTEAVFSEEALIQVPSDI 127
Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCG 207
               A+ +     TA+R L    ++  G                 Q + A G        
Sbjct: 128 PLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVR 187
Query: 208 -----SKSIDRVLAAGAEQAVDYSSKDIEL---AIKGKFDAV------LDTIGAPETERL 253
                 K  DR+ + GAE  +     + EL    +K  F  +      L+ +G   +  L
Sbjct: 188 DRPDIQKLSDRLKSLGAEHVI----TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 243
Query: 254 GLNFLKRGGHYMTLHG 269
            L  L RGG  +T  G
Sbjct: 244 -LRQLARGGTMVTYGG 258

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 101/250 (40%), Gaps = 29/250 (11%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A VL R GGP  L   P    P+ +  EV++R  AV +N  D   R G Y   +  P +
Sbjct: 2   KAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLXRLGAYLTRLHPPFI 58
Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P                      V    + AL P   +G  A+   + +  L P P  ++
Sbjct: 59  P---------------GXEVVGVVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
             +A+A P + LTA+ ALK  A+   G++               Q + A G  V +A   
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            + +   LA GAE+A  Y+         G  D VL+  G    E LGL  L  GG  + +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLVYI 217
Query: 268 ---HGETAAL 274
               GE A +
Sbjct: 218 GAAEGEVAPI 227

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 57/364 (15%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+ +F  P  L+++  VE P +   EVLVR +A  +    T + + +G    +P LP
Sbjct: 2   KAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGV--CHTDLHAAHGDWPVKPKLP 56
Query: 90  LILGRDISGEVAAVGASVRSLTVG---------------------QEVFGALHPTA---V 125
           LI G +  G V  VG  V  L VG                     QE        A   V
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXX 185
            G YA+Y   + D +   P +++  +A+ I  A +T ++ALK     ++           
Sbjct: 117 DGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG--AKPGEWVAIYGIG 174
Query: 186 XXXXXXXQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKD----IELAIKGKFDA 240
                  Q++ A G +V A   G + ++     GA+  V+   +D    ++  + G   A
Sbjct: 175 GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAA 234
Query: 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY 300
           V+  +  P  +    N ++RGG           L       + +PI  TVL   +     
Sbjct: 235 VVTAVSKPAFQS-AYNSIRRGG--------ACVLVGLPPEEMPIPIFDTVLNGIK----- 280
Query: 301 SYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV 360
              I  S +  R D   L+E  + +  GK+K  ++    + ++ E  +   K  I G+VV
Sbjct: 281 ---IIGSIVGTRKD---LQEALQFAAEGKVKTIIE-VQPLEKINEVFDRMLKGQINGRVV 333
Query: 361 LEFD 364
           L  +
Sbjct: 334 LTLE 337

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 57/364 (15%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+ +F  P  L+++  VE P +   EVLVR +A  +    T + + +G    +P LP
Sbjct: 2   KAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGV--CHTDLHAAHGDWPVKPKLP 56
Query: 90  LILGRDISGEVAAVGASVRSLTVG---------------------QEVFGALHPTA---V 125
           LI G +  G V  VG  V  L VG                     QE        A   V
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXX 185
            G YA+Y   + D +   P +++  +A+ I  A +T ++ALK     ++           
Sbjct: 117 DGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG--AKPGEWVAIYGIG 174
Query: 186 XXXXXXXQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKD----IELAIKGKFDA 240
                  Q++ A G +V A   G + ++     GA+  V+   +D    ++  + G   A
Sbjct: 175 GFGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAA 234
Query: 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY 300
           V+  +  P  +    N ++RGG           L       + +PI  TVL   +     
Sbjct: 235 VVTAVSKPAFQS-AYNSIRRGG--------ACVLVGLPPEEMPIPIFDTVLNGIK----- 280
Query: 301 SYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV 360
              I  S +  R D   L+E  + +  GK+K  ++    + ++ E  +   K  I G+VV
Sbjct: 281 ---IIGSIVGTRKD---LQEALQFAAEGKVKTIIE-VQPLEKINEVFDRMLKGQINGRVV 333
Query: 361 LEFD 364
           L  +
Sbjct: 334 LTLE 337

>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY 79
           +F    + +AV+  + G P+ +    + E+ D  L PNEV+V+T    INP D     G 
Sbjct: 19  QFRTMITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGV 78
Query: 80  ---------GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTY 129
                    G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+
Sbjct: 79  YPSKPAKTTGFGTAEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTW 132
Query: 130 ADYAVLSEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
             +A+ ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 133 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 190

>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY 79
           +F    + +AV+  + G P+ +    + E+ D  L PNEV+V+T    +NP D     G 
Sbjct: 19  QFRTMITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGV 78
Query: 80  ---------GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTY 129
                    G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+
Sbjct: 79  YPSKPAKTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTW 132
Query: 130 ADYAVLSEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
             +A+ ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 133 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 190

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 67/171 (39%), Gaps = 48/171 (28%)
Query: 49  VEVPDLKPNEVLVRTRAVSIN----------PLDT-------RMRSGYGRSIFEPLLPLI 91
           V +P+L P+EVLV   A SIN          P+ T         + G+     +P    +
Sbjct: 55  VPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYH--V 112
Query: 92  LGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------------- 126
           LG D SG V   G  VR    G  V   +HP  V                          
Sbjct: 113 LGSDCSGVVVRTGIGVRRWKPGDHVI--VHPAHVDEQEPATHGDGMLGTEQRAWGFETNF 170
Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMSEG 175
           G  A+Y V+   +L PKP  +T  +A+  P  A TA+R L     A+M +G
Sbjct: 171 GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQG 221

>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
           + +AV+  + G P+ +    + E+ D  L PNEV+V+T    INP D     G       
Sbjct: 3   TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPA 62
Query: 80  ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
              G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+  +A+ 
Sbjct: 63  KTTGFGTAEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
           ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 148/411 (36%), Gaps = 86/411 (20%)
Query: 20  FVRFLVTTSCRAVVLPR-----FGGPEVLEVRP-------NVEVPDLKPNEVLVRTRAVS 67
           F    +  S RA+ + +     F G E  +  P        V VP+L P E LV   A S
Sbjct: 40  FAALQLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDEVPVPELGPGEALVAVMASS 99
Query: 68  INPLDTRMRSGYGRSIFEP------------LLPL---------ILGRDISGEVAAVGAS 106
           +N       +    SIFEP            L PL         I+G D++G V   G  
Sbjct: 100 VN------YNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLPYHIIGSDLAGVVLRTGPG 153
Query: 107 VRSLTVGQEVFGALHPTAVR-------------------------GTYADYAVLSEDELT 141
           V +   G EV    H  +V                          G  A+ A++  ++L 
Sbjct: 154 VNAWQPGDEVVA--HCLSVELESPDGHDDTMLDPEQRIWGFETNFGGLAEIALVKTNQLM 211
Query: 142 PKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQRXXXXXXXXXXXXXXXQFSVASG 199
           PKP  +T  +A+A      TA+R L  +  A M +G                 QF++A G
Sbjct: 212 PKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQFALAGG 271
Query: 200 CH-VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFL 258
            + +      +  +   + GAE  +D +++        KF     T    E +R G    
Sbjct: 272 ANPICVVSSPQKAEICRSMGAEAIIDRNAEGY------KFWKDEHTQDPKEWKRFGKRIR 325
Query: 259 K-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR----- 312
           +  GG  + +  E     + +G ++ +      +      + Y +  D  Y++M      
Sbjct: 326 ELTGGEDIDIVFEHPG-RETFGASVYVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRII 384
Query: 313 ----ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKV 359
               A+     E  RL   GK+   + KT+ + +  +A     + L  GKV
Sbjct: 385 GSHFANYREAYEANRLIAKGKIHPTLSKTYSLEETGQAAYDVHRNLHQGKV 435

>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
           + +AV+  + G P+ +    + E+ D  L PNEV+V+T    +NP D     G       
Sbjct: 3   TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPA 62
Query: 80  ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
              G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+  +A+ 
Sbjct: 63  KTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
           ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168

>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
           + +AV+  + G P+ +    + E+ D  L PNEV+V+T    +NP D     G       
Sbjct: 3   TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPA 62
Query: 80  ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
              G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+  +A+ 
Sbjct: 63  KTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
           ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVA 197
           D + P P ++   +A+    A LTAW +L    R+S G+R                 +  
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61
Query: 198 SGCHVSATCGSKSIDRVLA------AGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE 251
            G  +  T GS +   +L+       G  ++VD++ + +EL      D VL+++     +
Sbjct: 62  IGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQ 121
Query: 252 RLGLNFLKRGGHYMTL 267
           R G+  L  GG ++ L
Sbjct: 122 R-GVQILAPGGRFIEL 136

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 87/230 (37%), Gaps = 57/230 (24%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL-------------------- 87
           +V VP+L P E LV   A S+N       +    SIFEPL                    
Sbjct: 62  DVPVPELGPGEALVAVMASSVN------YNSVHTSIFEPLSTFGFLERYGRVSDLAKRHD 115
Query: 88  LPL-ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-------------------- 126
           LP  ++G D++G V   G  V +   G EV    H  +V                     
Sbjct: 116 LPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVA--HCLSVELESSDGHNDTMLDPEQRIWG 173
Query: 127 -----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQRXX 179
                G  A+ A++  ++L PKP  ++  +A+A      TA+R L  +  A M +G    
Sbjct: 174 FETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVL 233
Query: 180 XXXXXXXXXXXXXQFSVASGCH-VSATCGSKSIDRVLAAGAEQAVDYSSK 228
                        QF++A G + +      +  +   A GAE  +D +++
Sbjct: 234 IWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAE 283

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
           N  +P+  PNEVL+R  +V I   D      YGR   F    P++LG + SG V  VG+S
Sbjct: 23  NYPIPEPGPNEVLLRMHSVGICGSDVHYWE-YGRIGNFIVKKPMVLGHEASGTVEKVGSS 81
Query: 107 VRSLTVGQEVFGALHPTAVR 126
           V+ L  G  V  A+ P A R
Sbjct: 82  VKHLKPGDRV--AIEPGAPR 99

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
           N  +P+  PNEVL+R  +V I   D      YGR   F    P +LG + SG V  VG+S
Sbjct: 23  NYPIPEPGPNEVLLRXHSVGICGSDVHYWE-YGRIGNFIVKKPXVLGHEASGTVEKVGSS 81
Query: 107 VRSLTVGQEVFGALHPTAVR 126
           V+ L  G  V  A+ P A R
Sbjct: 82  VKHLKPGDRV--AIEPGAPR 99

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 146/369 (39%), Gaps = 62/369 (16%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGR-SIFEPL 87
           RA+ L   G P  LE   ++ +P  K ++VL++  A  +   D  MR G +G   I E L
Sbjct: 2   RAMRLVEIGKPLKLE---DIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 88  ---LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
              LP+ LG +I+G +  VG  V   + G  V  A++P                      
Sbjct: 59  GVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLV--AVNPWEGEGNCYYCRIGEEHLCDSPR 116
Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXX 179
                  G YA+Y ++   +   K   ++  +A+ +  + +T +RA++  A +   +   
Sbjct: 117 WLGINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVR-KASLDPSKTLV 175
Query: 180 XXXXXXXXXXXXXQF--SVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD----IELA 233
                        Q   +V+    +      ++++    AGA+  ++ SS+D    I   
Sbjct: 176 VIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRI 235
Query: 234 IKGK-FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL 292
            +GK  DAV+D   + +T  +    L + G Y+ +    A L  H  L            
Sbjct: 236 TQGKGADAVIDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLI----------- 284
Query: 293 KKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDK 352
                T        S +  ++D  G   I  L+E GK+K  V KT  + +  EA +  + 
Sbjct: 285 -----TLNEVQFIGSLVGNQSDFLG---IMSLAEAGKVKPMVTKTMKLEEANEAIDNLEN 336
Query: 353 RLIPGKVVL 361
               G+ VL
Sbjct: 337 FKAVGRQVL 345

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 29/162 (17%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+  +G P  +E    V+VP   P +VLV+  A  +    T + +  G    +P LP
Sbjct: 8   KAAVVHAYGAPLRIE---EVKVPLPGPGQVLVKIEASGV--CHTDLHAAEGDWPVKPPLP 62
Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------V 125
            I G +  G VAAVG+ V  +  G  V      TA                        V
Sbjct: 63  FIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSV 122
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
            G YA+Y +   + +   P +V  A+ + I  A +T ++ LK
Sbjct: 123 NGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLK 164

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
           N  +P+  PNEVL++  +V I   D      +GR   F    P++LG + SG V  VG+ 
Sbjct: 22  NYPIPEPGPNEVLLKMHSVGICGSDVHYWQ-HGRIGDFVVKKPMVLGHEASGTVVKVGSL 80
Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTP 142
           VR L  G  V  A+ P A R T  ++  +    L+P
Sbjct: 81  VRHLQPGDRV--AIQPGAPRQT-DEFCKIGRYNLSP 113

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 39  GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM--RSGYGRSIFEPLLPLILGRDI 96
           G E++EV    +VP   P EVL++  A SI   D  +   + + +S  +P  P I+G ++
Sbjct: 16  GAELVEV----DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP--PQIMGHEV 69
Query: 97  SGEVAAVGASVRSLTVGQEV 116
           +GEV  VG  V  L VG  +
Sbjct: 70  AGEVVEVGPGVEDLQVGDYI 89

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 139/354 (39%), Gaps = 62/354 (17%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGR-SIFEPL 87
           RAV L   G P  L+    + VP  K  +VL++  A  +   D  MR G +G   I E L
Sbjct: 2   RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 88  ---LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
              LP+ LG +I+G++  VG  V   + G  V  A++P                      
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPR 116
Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXX 179
                  G YA+Y ++   +   K   +   +A+ +  + +T +RA++  A +   +   
Sbjct: 117 WLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLL 175
Query: 180 XXXXXXXXXXXXXQF--SVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-- 235
                        Q   +V+    +      ++++    AGA+  ++ S +D    I+  
Sbjct: 176 VVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRI 235
Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL 292
                 DAV+D   + +T  +    L + G Y+ +    A L  H       P+ T   +
Sbjct: 236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYH------APLITLSEI 289
Query: 293 KKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREA 346
           +             S +  ++D  G   I RL+E GK+K  + KT  + +  EA
Sbjct: 290 Q----------FVGSLVGNQSDFLG---IMRLAEAGKVKPMITKTMKLEEANEA 330

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	364
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-109
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-104
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-81
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	6e-77
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-71
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-70
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	5e-70
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	1e-69
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	5e-68
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	9e-68
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	2e-66
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-66
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	3e-63
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	6e-63
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-60
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-59
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	3e-58
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	5e-58
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	5e-57
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	6e-57
4eye_A	342	Probable oxidoreductase; structural genomics, niai	4e-56
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	4e-56
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	9e-54
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-52
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-51
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	6e-49
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	7e-49
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	9e-45
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	3e-35
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	1e-34
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-33
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	6e-28
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	3e-27
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-26
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	3e-24
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	3e-22
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-21
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	9e-21
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-20
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	4e-20
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	7e-20
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-18
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-18
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	7e-18
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	3e-17
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	4e-15
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	3e-14
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	5e-14
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	5e-14
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	8e-14
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	3e-13
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	8e-13
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-12
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	1e-12
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-12
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-11
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	6e-11
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	3e-10
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	6e-10
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	7e-10
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	3e-09
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	3e-09
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-08
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-08
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	3e-07
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	8e-07
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-04
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-04

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  323 bits (830), Expect = e-109
 Identities = 114/354 (32%), Positives = 184/354 (51%), Gaps = 24/354 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFE--- 85
            A V+ ++G  EVL    N+ +P +  PNEV+V+  A S+NP+D  MRSGYG +      
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 86  ---------PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLS 136
                       PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++ V+S
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEFVVVS 141

Query: 137 EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRLLVLGGGGAVGFAAV 192
            +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R+L+LG  G VG  A+
Sbjct: 142 GNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAI 201

Query: 193 QFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAPET 250
           Q   A   HV+A C   + + V   GA+  +DY S  +E  +K    FD +LD +G    
Sbjct: 202 QVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTE 261

Query: 251 ERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSY 308
                +FLK+  G  Y+TL        D  G+A G+      +  K ++ +   G+ Y +
Sbjct: 262 TWA-PDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHF-WKGVHYRW 319

Query: 309 IYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            +  A    L++I  L + GK++  +++TF  ++V EA    ++    GK V+ 
Sbjct: 320 AFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVIN 373

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  309 bits (794), Expect = e-104
 Identities = 90/335 (26%), Positives = 160/335 (47%), Gaps = 25/335 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG--RSIFEPL 87
           +A+   +FG P+VL++  +   P+ + N++L++  A S+NP+D + R+G G      +  
Sbjct: 8   KAIQFDQFGPPKVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP  LG D SGEV  +G+ V ++ +G +V G          YA+Y   S D +  K   +
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKL 126

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +   A+++P A LTA +AL   A + +G  +L+  G G VG  A+Q +   G  V  T  
Sbjct: 127 SFLQAASLPTAGLTALQALN-QAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS 185

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            ++   + A GAEQ ++Y  +D  LAI    DAV+D +G     +  ++ LK  G  +++
Sbjct: 186 KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQS-IDCLKETGCIVSV 244

Query: 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSET 327
              TA                     + ++           +  + + E L  + +L   
Sbjct: 245 PTITAG--------------------RVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSE 284

Query: 328 GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            KL+I + + F +++   AHE  +   + GK+V +
Sbjct: 285 DKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFK 319

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  250 bits (642), Expect = 2e-81
 Identities = 104/345 (30%), Positives = 154/345 (44%), Gaps = 27/345 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            A V+    GP VL     +  P   P +VLV+  A   NPLD ++R+G      +  LP
Sbjct: 9   IAAVVEEANGPFVLR---KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAP-HAQQPLP 64

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALH-PTAVRGTYADYAVLSEDELTPKPVSVT 148
            ILG D++G V AVG  V S  VG  VFG       ++GT+A +A +    L  KP ++T
Sbjct: 65  AILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALT 124

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              AS +P   +TAW  L   A++ +GQ +L+ GGGG VG  A+Q ++A G  V AT   
Sbjct: 125 MRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARG 184

Query: 209 KSIDRVLAAGAEQAVDYSSKD---IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
             ++ V   GA         +    E      FD V DT+G P  +    + +KR GH +
Sbjct: 185 SDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDA-SFSAVKRFGHVV 243

Query: 266 TLHGE-TAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL 324
           +  G  T  LA             T+      +             +    E L E   L
Sbjct: 244 SCLGWGTHKLAPLSFKQATYSGVFTLHTLLANE------------GLAHFGEMLREADAL 291

Query: 325 SETGKLKIPVD-KTFHMTQVREAHEAKDKRL----IPGKVVLEFD 364
            +TGKL   +D +TF + ++  A++A   R       GK+ +  +
Sbjct: 292 VQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  238 bits (610), Expect = 6e-77
 Identities = 66/334 (19%), Positives = 132/334 (39%), Gaps = 25/334 (7%)

Query: 30  RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
               +  +      + +  +V++P L  +++LV+ +A+ INP+D +              
Sbjct: 3   EQHQVWAYQTKTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKAN---PINWSN 58

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
             + G D +G +  VGA V S  +G+ V          G++A++ VL+ D +   P +++
Sbjct: 59  GHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKR-HGSFAEFTVLNTDRVMTLPDNLS 117

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              A+A+P   LTAW+A +    +++ + +L++G G  V     Q    +G  V     S
Sbjct: 118 FERAAALPCPLLTAWQAFE-KIPLTKQREVLIVGFGA-VNNLLTQMLNNAGYVVDLVSAS 175

Query: 209 KSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH 268
            S       G        S+  +     K+ A+ D + +     L +  LK  GH     
Sbjct: 176 LSQALAAKRGVRHLYREPSQVTQ-----KYFAIFDAVNSQNAAAL-VPSLKANGHI---- 225

Query: 269 GETAALADHYGLALGLPIATTVLLKKR-MQTWYSYGIDYSYIYMRADAEGLEEIRRLSET 327
                + D     +      T+   +  +   + +G    +  +       E +  L   
Sbjct: 226 ---ICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQ---GEALLTLIAQ 279

Query: 328 GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
           GK++I     F   Q+ EA +  ++  +   + L
Sbjct: 280 GKMEIAAPDIFRFEQMIEALDHSEQTKLKTVLTL 313

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  225 bits (575), Expect = 3e-71
 Identities = 94/344 (27%), Positives = 155/344 (45%), Gaps = 37/344 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAV +  FGGPEVL++R ++ VP  K ++VL++  A  +NP++T +RSG Y     +PLL
Sbjct: 31  RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS---RKPLL 87

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P   G D++G + AVG +  +   G  VF +   +   G YA+YA+ ++  +   P  + 
Sbjct: 88  PYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTIS---GGYAEYALAADHTVYKLPEKLD 144

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
               +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  +  T G+
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT 204

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
           +     VL  GA +  ++   +    IK     K  D +++ +      +  L+ L  GG
Sbjct: 205 EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSK-DLSLLSHGG 263

Query: 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ----TWYSYGIDYSYIYMRADAEGL 318
             +             G    + I     + K       T +S   +          +  
Sbjct: 264 RVIV-----------VGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEF-------QQYA 305

Query: 319 EEIRRLSETGKLKIPVDKTFHMTQVREAHEAK-DKRLIPGKVVL 361
             ++   E G LK  +   + + +V EAHE         GK++L
Sbjct: 306 AALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 349

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  223 bits (569), Expect = 3e-70
 Identities = 85/366 (23%), Positives = 135/366 (36%), Gaps = 34/366 (9%)

Query: 23  FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS 82
           F+      A+ +       V         P L  ++V VR  AV+INP DT MR  +   
Sbjct: 6   FIPPPQQTALTVNDHDEVTVWN---AAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF--- 59

Query: 83  IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR----GTYADYAVLSED 138
                    LG D +G V AVG+ V  + VG  V+GA +    R    G ++ Y V    
Sbjct: 60  ---ATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGR 116

Query: 139 ELTPKPVSVTHADASAIPFAALTAWRALKC------------AARMSEGQRLLVLGGGGA 186
                P  ++   A+A+P    TA  A+K                 S+   +LV GG  A
Sbjct: 117 VWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTA 176

Query: 187 VGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVL 242
                +Q    SG    ATC   + D   + GAE+  DY + ++   I+          L
Sbjct: 177 TATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYAL 236

Query: 243 DTIGAPETERLGLNFLKR-GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS 301
           D I   E+       + R GGHY++L+      A    +     +  T+   +       
Sbjct: 237 DCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTI-FGEGSTWPAP 295

Query: 302 YGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMT--QVREAHEA-KDKRLIPGK 358
           YG   S    +   +      +L E G+L     +        +++  E  +   L   K
Sbjct: 296 YGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEK 355

Query: 359 VVLEFD 364
           +V+  +
Sbjct: 356 LVVRLE 361

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  221 bits (566), Expect = 5e-70
 Identities = 114/363 (31%), Positives = 162/363 (44%), Gaps = 53/363 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAVV+   GGPEVLEV  ++ VP+  P EV VR +A ++N LD  +R G       +  L
Sbjct: 2   RAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS---PKLPL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AV 125
           P +LG D SG V AVG  V     G EV      +                         
Sbjct: 58  PHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR 117

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
            GTYA+Y VL E  L PKP +++  +A+AIP   LTAW+ +     +  G  +LV+  G 
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGS 177

Query: 186 AVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FD 239
            V  AA+Q +   G  V AT GS+  + R  A GA++ V+Y+  D    ++    GK  D
Sbjct: 178 GVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGAD 237

Query: 240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW 299
            V+D  GA   E + +     GG          A +   G    LP A   +  ++    
Sbjct: 238 KVVDHTGALYFEGV-IKATANGGRIAIA----GASS---GYEGTLPFAH--VFYRQ---- 283

Query: 300 YSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKV 359
               +      M + +  L  I R  E GKLK  V +   +    E H   ++R + GKV
Sbjct: 284 ----LSILGSTMASKSR-LFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKV 338

Query: 360 VLE 362
           VL+
Sbjct: 339 VLQ 341

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  220 bits (564), Expect = 1e-69
 Identities = 74/361 (20%), Positives = 142/361 (39%), Gaps = 52/361 (14%)

Query: 30  RAVVLPR---FGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           +A+   +        + +   N+++P+ K +E+LV+ +++S+NP+DT+ R          
Sbjct: 4   KAIGFEQPFKLSDGNLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMDV-----S 57

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
             P +LG D  G V +VG  V     G  V+ +  P    G+ A+Y +++E  +   P +
Sbjct: 58  KAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQ-NGSNAEYQLINERLVAKAPKN 116

Query: 147 VTHADASAIPFAALTAWRAL------KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           ++   A ++P   +TA+  L            +EG+ LL++ G G VG  A Q + A G 
Sbjct: 117 ISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL 176

Query: 201 HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIE----LAIKGKFDAVLDTIGAPETERLGL 255
            V  T    ++I+     GA+  +++    +       I+   D V  T          +
Sbjct: 177 RVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIEL-VDYVFCTFNTDMYYDDMI 235

Query: 256 NFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADA 315
             +K  GH  T+                        LK +     S    + +++ R   
Sbjct: 236 QLVKPRGHIATIVAFENDQD-------------LNALKPK-----SLSFSHEFMFARPLN 277

Query: 316 EG---------LEEIRRLSETGKLKIPVDKT---FHMTQVREAHEAKDKRLIPGKVVLEF 363
           +          LE+I    E    +    K         + +AH+  +   + GK+V+  
Sbjct: 278 QTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINL 337

Query: 364 D 364
           +
Sbjct: 338 N 338

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  217 bits (554), Expect = 5e-68
 Identities = 79/356 (22%), Positives = 142/356 (39%), Gaps = 33/356 (9%)

Query: 24  LVTTSCRAVVLPRFGG---PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG 80
           L   S +AV   +         L     +  P    +++LV  +AVS+NP+D ++R    
Sbjct: 18  LYFQSMKAVGYNKPAPITDDASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTP 76

Query: 81  RSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140
               +     ++G D +G V+AVG  V     G EVF A       GT A++ ++ E  +
Sbjct: 77  P---DGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIR-PGTNAEFHLVDERIV 132

Query: 141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSE-----GQRLLVLGGGGAVGFAAVQFS 195
             KP ++  A+A+A+P  ++TAW A      +++        +L++GG G VG  AVQ +
Sbjct: 133 GRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIA 192

Query: 196 VA-SGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK---GKFDAVLDTIGAPET 250
              +   V AT    ++ + V + GA   +D+S            G    V  T    + 
Sbjct: 193 RQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKH 252

Query: 251 ERLGLNFLKRGGHYMTLHG-ETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI 309
                + +   G +  +       +      A+ +      L+  R          +   
Sbjct: 253 AAEIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSI---HHELMFTRP--------MFGTP 301

Query: 310 YMRADAEGLEEIRRLSETGKLKIPVDKTFH---MTQVREAHEAKDKRLIPGKVVLE 362
            M      L ++ RL + G+L+  +           +++AH   +     GKVV+E
Sbjct: 302 DMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIE 357

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  216 bits (553), Expect = 9e-68
 Identities = 93/361 (25%), Positives = 141/361 (39%), Gaps = 53/361 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +         P  L++     VP+   ++++VRT AVS+N  D  +     G    +   
Sbjct: 29  QEWST-ETVAPHDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMG---LDLAF 83

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT--------------------AVRGT 128
           P +   D+SG V AVG SV     G  V     P                     A  G 
Sbjct: 84  PFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGV 143

Query: 129 YADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188
            ++Y VL E      P S+  A+AS +P A LTAW AL     +  G R++V G GG V 
Sbjct: 144 LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VA 202

Query: 189 FAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVL 242
              +Q + A+G  V  T  S+  +DR  A GA+  ++   +D    +      +  D +L
Sbjct: 203 LFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHIL 262

Query: 243 DTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY 302
           +  G     +  L  +   G    +      L    G  +  P+    LL K        
Sbjct: 263 EIAGGAGLGQS-LKAVAPDGRISVI----GVLE---GFEVSGPVGP--LLLKSPVV---Q 309

Query: 303 GIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
           G     I +      LE++    +   LK  +D  +  T+V EA    D+    GKVV+E
Sbjct: 310 G-----ISVGHRRA-LEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGPF-GKVVIE 362

Query: 363 F 363
           F
Sbjct: 363 F 363

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  213 bits (544), Expect = 2e-66
 Identities = 86/355 (24%), Positives = 139/355 (39%), Gaps = 40/355 (11%)

Query: 25  VTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRS 82
           +    RA+V    G P +V+E++ N+E+  ++ ++V V+  A  INP D  M  G YG  
Sbjct: 23  MPARVRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG-- 79

Query: 83  IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTP 142
              P LP + G +   +V AVG++V  L  G  V  A       GT+   AV SE+ L  
Sbjct: 80  -LLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGL---GTWRTEAVFSEEALIQ 135

Query: 143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV 202
            P  +    A+ +     TA+R L    ++  G  ++       VG A +Q + A G   
Sbjct: 136 VPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRT 195

Query: 203 SATCGS-----KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETER 252
                      K  DR+ + GAE  +                  +    L+ +G   +  
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE 255

Query: 253 LGLNFLKRGGHYMTLHGETAALADHYGLALG--LPIATTVLLKKRMQ----TWYSYGIDY 306
           L L  L RGG  +T           YG      +  + ++L+ K ++        +  D+
Sbjct: 256 L-LRQLARGGTMVT-----------YGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDH 303

Query: 307 SYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
           S        E +  +  L   G+L  P      +   + A EA  K  I  K +L
Sbjct: 304 S---PDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQIL 355

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  212 bits (543), Expect = 2e-66
 Identities = 86/348 (24%), Positives = 136/348 (39%), Gaps = 32/348 (9%)

Query: 26  TTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSI 83
           +   + +   +FG P +VL+V     +  LK NEV VR     INP D    +G Y    
Sbjct: 2   SLHGKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYA--- 57

Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
               LP I G +  G V  VGA V    +G+ V          GT+ +Y   S D + P 
Sbjct: 58  HRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGE----GTWQEYVKTSADFVVPI 113

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVS 203
           P S+    A+ +    LTAW        +     LLV   G A+G    Q S      + 
Sbjct: 114 PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLI 173

Query: 204 ATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNF 257
           A   +    + +L  GA   +D S+  +   +     G   DA +D+IG P+   L    
Sbjct: 174 AVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNEL-AFS 232

Query: 258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY-SYGIDYSYIYMRADAE 316
           L+  GH++T            GL  G+ +    ++ K        +   ++        +
Sbjct: 233 LRPNGHFLT-----------IGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQ 281

Query: 317 GL-EEIRRLSETGKLK-IPVDKTFHMTQVREAHEA-KDKRLIPGKVVL 361
                + RL E  +L+ + V  T+ +  V+ A +  +      GKV L
Sbjct: 282 ETFRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFL 329

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  204 bits (521), Expect = 3e-63
 Identities = 83/349 (23%), Positives = 139/349 (39%), Gaps = 24/349 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAVVL  FGG   L +     +P+ +  E+ +R +A  +N +D  +R G        P  
Sbjct: 5   RAVVLAGFGGLNKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNID---NPPKT 60

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           PL+ G + SG V A+G SV+   +G  V   ++       +A+      + +   P  ++
Sbjct: 61  PLVPGFECSGIVEALGDSVKGYEIGDRVMAFVN----YNAWAEVVCTPVEFVYKIPDDMS 116

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
            ++A+A P   +TA+  L   A + EG  +LV   GG VG A  Q              S
Sbjct: 117 FSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS 176

Query: 209 KSIDRVLAAGAEQAVDYSSKDIELAIK---GK-FDAVLDTIGAPETERLGLNFLKRGGHY 264
                 +        D  + D    +K    +  D VLD +    T + GL+ LK  G Y
Sbjct: 177 TFKHEAIKDSVTHLFDR-NADYVQEVKRISAEGVDIVLDCLCGDNTGK-GLSLLKPLGTY 234

Query: 265 MT---LHGETAALADHYGLALGLPIATTV----LLKKRMQ-TWYSYGIDYSYIYMRADAE 316
           +     +  T      +  A        V    L ++      +S               
Sbjct: 235 ILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIR 294

Query: 317 GL-EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
           G+ E++  L    K+K  VD  + + +V+EA +    R   GK++L+ +
Sbjct: 295 GVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVE 343

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  203 bits (519), Expect = 6e-63
 Identities = 101/346 (29%), Positives = 149/346 (43%), Gaps = 36/346 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           R V L  FGGP+V+ +     +P     EVLVR  A+ +N  D   R G Y         
Sbjct: 30  RFVDLKSFGGPDVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYP---PPKDA 85

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
             ILG ++SGE+  VG  V    VG +V G  +     G YA+Y +L   ++ P P    
Sbjct: 86  SPILGLELSGEIVGVGPGVSGYAVGDKVCGLAN----GGAYAEYCLLPAGQILPFPKGYD 141

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              A+A+P    T W  L   A ++EG+ +L+ GG   +G  A+Q + A G  V AT GS
Sbjct: 142 AVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGS 201

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK---GK-FDAVLDTIGAPETERLGLNFLKRGGH 263
               +     GA++ ++Y S+D    IK   G+  D +LD IGA   ER  +  L + G 
Sbjct: 202 TGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFER-NIASLAKDGC 260

Query: 264 YM---TLHGETAALADHYGLALGLPIATTVLLKKRMQ----TWYSYGIDYSYIYMRADAE 316
                 L G  A   +     L        ++ KR+     T      +          +
Sbjct: 261 LSIIAFLGGAVAEKVN-----LSP------IMVKRLTVTGSTMRPRTAEEK---RAIRDD 306

Query: 317 GLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            L E+  L E G +   + K F    V +AH   ++    GKV+L 
Sbjct: 307 LLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLT 352

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  197 bits (504), Expect = 1e-60
 Identities = 92/350 (26%), Positives = 139/350 (39%), Gaps = 35/350 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
            AV   + GGPE L V+  V  P     EVL++  A ++N  D   R G Y      P  
Sbjct: 24  LAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP---PPGA 79

Query: 89  PLILGRDISGEVAAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
             ILG + SG VA +G   +    +G      L      G  A Y  + E  L P P  +
Sbjct: 80  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLP----GGGQAQYVTVPEGLLMPIPEGL 135

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           T   A+AIP A LTA++ L     +  G  +L+  G   VG AA+Q +  +G     T G
Sbjct: 136 TLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG 195

Query: 208 SKS-IDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG 261
           S+  +      GA    +Y  +D   A          + +LD IG    E+  +N L   
Sbjct: 196 SQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK-NVNCLALD 254

Query: 262 GHYM---TLHGETAALADHYGLALGLPIATTVLLKKRMQ----TWYSYGIDYSYIYMRAD 314
           G ++    + G                   + LL KR         S    Y  + + A 
Sbjct: 255 GRWVLYGLMGGGDINGPL-----------FSKLLFKRGSLITSLLRSRDNKYKQMLVNAF 303

Query: 315 AEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
            E +          +L   +D+ + +T+++EAH+  +     GK+VLE  
Sbjct: 304 TEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP 353

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  197 bits (503), Expect = 2e-59
 Identities = 82/387 (21%), Positives = 125/387 (32%), Gaps = 83/387 (21%)

Query: 38  GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE------------ 85
              + L +   V +P+L P+EVLV   A SIN              F             
Sbjct: 45  DVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWA 103

Query: 86  ---PLLPLILGRDISGEVAAVGASVRSLTVGQEV-----------------------FGA 119
                   +LG D SG V   G  VR    G  V                         A
Sbjct: 104 TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRA 163

Query: 120 LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQR 177
                  G  A+Y V+   +L PKP  +T  +A+  P  A TA+R L     A+M +G  
Sbjct: 164 WGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDI 223

Query: 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKD------- 229
           +L+ G  G +G  A+QF    G    A   S      V A G +  ++ +          
Sbjct: 224 VLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIAD 283

Query: 230 ---------------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAAL 274
                          +      + D V +  G   T  L +   +RGG  +T  G ++  
Sbjct: 284 DPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVTC-GSSS-- 339

Query: 275 ADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPV 334
               G           +  K++      G         A+ E  +   RL E+G +   +
Sbjct: 340 ----GYLHTFDNRYLWMKLKKIV-----GS------HGANHEEQQATNRLFESGAVVPAM 384

Query: 335 DKTFHMTQVREAHEAKDKRLIPGKVVL 361
              + + +  EA          GKV +
Sbjct: 385 SAVYPLAEAAEACRVVQTSRQVGKVAV 411

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  191 bits (487), Expect = 3e-58
 Identities = 83/343 (24%), Positives = 143/343 (41%), Gaps = 27/343 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            A V+ + GGP+       V+V    P +V +R  A+ +N LDT  R+G    +     P
Sbjct: 3   MAAVIHKKGGPDNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPP 61

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP--VSV 147
           +++G + +  V  VG  V   TVG+ V   L P    G Y+   +   ++L   P  + +
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPL---GAYSQERLYPAEKLIKVPKDLDL 118

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
                + +    +TA   L    ++  G  +L+    G +G   V ++   G  V  T  
Sbjct: 119 DDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS 178

Query: 208 SKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRG 261
           ++   +     G    ++YS++D    ++    GK  D V D+IG  +T +  L+ L+  
Sbjct: 179 TEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR 237

Query: 262 GHYMTLHGETAALADHYGLALGL--PIATTVLLKKRMQTWYSYGIDYSYIYMRAD-AEGL 318
           G               YG A G+  PI     L  R   + +    + Y+  R++  EG 
Sbjct: 238 GMCAA-----------YGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGS 286

Query: 319 EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
           + +    + G L   V KTF + +   AH+    R   G +VL
Sbjct: 287 KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVL 329

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  194 bits (494), Expect = 5e-58
 Identities = 81/395 (20%), Positives = 129/395 (32%), Gaps = 82/395 (20%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE---- 85
            A +  R   P       +V VP+L P E LV   A S+N            S F     
Sbjct: 44  FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER 103

Query: 86  -----------PLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
                       L   ++G D++G V   G  V +   G EV                  
Sbjct: 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDT 163

Query: 117 -----FGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCA 169
                          G  A+ A++  ++L PKP  ++  +A+A      TA+R L  +  
Sbjct: 164 MLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNG 223

Query: 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSK 228
           A M +G  +L+ G  G +G  A QF++A G +      S    +   A GAE  +D +++
Sbjct: 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAE 283

Query: 229 DI----------------------ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
                                   EL      D V +  G        +   ++GG   T
Sbjct: 284 GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGAS-VFVTRKGGTITT 342

Query: 267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSE 326
               T+      G           +  KR+      G      +     E   E  RL  
Sbjct: 343 C-ASTS------GYMHEYDNRYLWMSLKRII-----G-----SHFANYRE-AWEANRLIA 384

Query: 327 TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
            G++   + K + +    +A     + L  GKV +
Sbjct: 385 KGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGV 419

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  188 bits (479), Expect = 5e-57
 Identities = 60/357 (16%), Positives = 114/357 (31%), Gaps = 46/357 (12%)

Query: 30  RAVVLPRFGGPE------------VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS 77
           +A++L   G  +             LE    + VP   P++VL++    SINP D     
Sbjct: 12  KALLLVGDGYTKTPSGSALEAMEPYLEQG-RIAVPAPGPSQVLIKVNLASINPSDVAFIK 70

Query: 78  G-YGRSIFEPLLPLILGRDISGEVAAVGASVRS-LTVGQEV--FGALHPTAVRGTYADYA 133
           G YG      +     G +  G + A G    +   VG+ V     L      G++A+YA
Sbjct: 71  GQYG---QPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNW---GSWAEYA 124

Query: 134 VLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQ 193
           V       P   +V   D +A+    LTA        +    +  ++  G   +    + 
Sbjct: 125 VAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFD-IVKQEGEKAFVMTAGASQLCKLIIG 183

Query: 194 FSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGA 247
            +   G     T      I  +   GA   ++  + D E  ++      +    LD +  
Sbjct: 184 LAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG 243

Query: 248 PETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA---TTVLLKKRMQTWYSYGI 304
           P    +  N + +   ++            YG              L+ +       +  
Sbjct: 244 PLASAI-FNAMPKRARWII-----------YGRLDPDATVIREPGQLIFQHKHIEGFWLS 291

Query: 305 DYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
           ++   +       + E ++    G+    V     + +   A    +     GKV +
Sbjct: 292 EWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAI-AWVPAELTKPNGKVFI 347

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  187 bits (477), Expect = 6e-57
 Identities = 90/342 (26%), Positives = 141/342 (41%), Gaps = 31/342 (9%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           + +     GGPEVLE   + E     P  V+VR +A+ +N +DT  RSG Y      P L
Sbjct: 3   KRIQFSTVGGPEVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA----PFL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P  LG + +G V AVG  V    VG  V     P    G Y++  VL E  L     SV+
Sbjct: 58  PSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPL---GAYSEVHVLPEANLVKLADSVS 114

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              A+A+    LT    L+   ++  G+ +L     G VG  A Q++ A G  +  T  S
Sbjct: 115 FEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSS 174

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
                   A GA + +DYS +D+   +     GK    V D +G  +T    L+ +   G
Sbjct: 175 PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPRG 233

Query: 263 HYMTLHGETAALADHYGLALGL--PIATTVLLKKRMQTWYSYGIDYSYIYMRAD-AEGLE 319
             ++           +G A G    +   +L +K    + +     SY     +     +
Sbjct: 234 LVVS-----------FGNASGPVSGVNLGILAQKD-SVYVTRPTLGSYANNAQNLQTMAD 281

Query: 320 EIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
           E+  +  +GKLK+   + + +    +A      R   G  +L
Sbjct: 282 ELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTIL 323

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  185 bits (473), Expect = 4e-56
 Identities = 76/346 (21%), Positives = 130/346 (37%), Gaps = 40/346 (11%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A+      GPE L    +VE P   PN V+V  +A  +   D  M  G Y     +   
Sbjct: 23  KAIQAQSLSGPEGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEY---QLKMEP 78

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P + G + +G V +       +  G  V          G YA+   ++   + P P  + 
Sbjct: 79  PFVPGIETAGVVRSAPE-GSGIKPGDRVMAFNFI----GGYAERVAVAPSNILPTPPQLD 133

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
            A+A A+     T + A     ++  G+ +LVLG  G +G AA+Q +   G  V A    
Sbjct: 134 DAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR 193

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
            +  + V + GA+  +    +    A++    G   D V+D IG P  +   +  L   G
Sbjct: 194 TAATEFVKSVGADIVLPL-EEGWAKAVREATGGAGVDMVVDPIGGPAFDD-AVRTLASEG 251

Query: 263 HYMTLHGETAALADHYGLALGL--PIATTVLLKKRMQ----TWYSYGIDYSYIYMRADAE 316
             +             G A G    I    LL +        W  +   ++         
Sbjct: 252 RLLV-----------VGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYET--- 297

Query: 317 GLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
               + +L   G ++ PV     +++ R+A +      + GK+VL 
Sbjct: 298 -QAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLV 341

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  186 bits (474), Expect = 4e-56
 Identities = 73/375 (19%), Positives = 127/375 (33%), Gaps = 56/375 (14%)

Query: 30  RAVVLPRFGGP-EVLEVRPN-VEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YG------ 80
           +AV+  + G P +VL  +   ++  +L PNEV+V+T    +NP D     G Y       
Sbjct: 5   QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 64

Query: 81  RSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140
                       G +   EV  VG++V SL  G  V  +       GT+  +A+ ++D+ 
Sbjct: 65  TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNF---GTWRTHALGNDDDF 121

Query: 141 TP-----------KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL-GGGGAVG 188
                        KP  +T    + I    LTA+  L    +++ G+   +  GG  AVG
Sbjct: 122 IKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVG 181

Query: 189 FAAVQFSVASGCHVSATCGSKS-----IDRVLAAGAEQAVDYSS----------KDIELA 233
             A Q       +  +    +      +  +   GA Q +              K+    
Sbjct: 182 KYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQ 241

Query: 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALG--LPIATTVL 291
             G+    L+ +G   +  +    L   G  +T           YG      + I T++ 
Sbjct: 242 SGGEAKLALNCVGGKSSTGI-ARKLNNNGLMLT-----------YGGMSFQPVTIPTSLY 289

Query: 292 LKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEA-- 349
           + K   +   +  +            L +I    E GKL             +  HE   
Sbjct: 290 IFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQ 349

Query: 350 -KDKRLIPGKVVLEF 363
                   GK ++ +
Sbjct: 350 DGVANSKDGKQLITY 364

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  179 bits (456), Expect = 9e-54
 Identities = 87/344 (25%), Positives = 147/344 (42%), Gaps = 33/344 (9%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
             +   + GGPEVL+        D   NE+ V  +A+ IN +DT +RSG Y      P L
Sbjct: 3   TRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP----PSL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P  LG + +G V+ VG+ V+ +  G  V  A       G Y+    +  D+    P +++
Sbjct: 58  PSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSAL---GAYSSVHNIIADKAAILPAAIS 114

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              A+A     LT +  L+    +   ++ L     G VG  A Q++ A G  +  T G+
Sbjct: 115 FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT 174

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
                  L AGA Q ++Y  +D+   +K    GK    V D++G  +T    L+ L+R G
Sbjct: 175 AQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRRG 233

Query: 263 HYMTLHGETAALADHYGLALGL--PIATTVLLKKRMQTWYSYGIDYSYIYMRAD-AEGLE 319
             ++           +G + G    +   +L +K    + +      YI  R +  E   
Sbjct: 234 LMVS-----------FGNSSGAVTGVNLGILNQKG-SLYVTRPSLQGYITTREELTEASN 281

Query: 320 EIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
           E+  L  +G +K  +   + + +   + AHE  + R   G  +L
Sbjct: 282 ELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  175 bits (447), Expect = 2e-52
 Identities = 87/351 (24%), Positives = 145/351 (41%), Gaps = 37/351 (10%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           +    + +++   GG +V++   +  VP +   E+L++ +   +N +++  R G    I+
Sbjct: 5   IPEQQKVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKG----IY 59

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYA-VLSEDELTPK 143
               P +LGR+ SG V A G  V +  VG +V           T+A Y+ + S+  +   
Sbjct: 60  PCEKPYVLGREASGTVVAKGKGVTNFEVGDQVA-----YISNSTFAQYSKISSQGPVMKL 114

Query: 144 PVSVTHADAS---AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           P   +  +     A     LTA      A  + +G  +L+    G VG    Q     G 
Sbjct: 115 PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA 174

Query: 201 HVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLG 254
           H  A   +   +      GAE  ++ S +DI   +     GK  DA  D++G  +T  + 
Sbjct: 175 HTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK-DTFEIS 233

Query: 255 LNFLKRGGHYMTLHGETAALADHYGLALGL--PIATTVLLKKRMQTWYSYGIDYSYIYMR 312
           L  LKR G +++           +G A GL  P + T L  K +         Y YI   
Sbjct: 234 LAALKRKGVFVS-----------FGNASGLIPPFSITRLSPKNI--TLVRPQLYGYIADP 280

Query: 313 AD-AEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
            +     +E   L  + KL I + KT+ +   R A    + R   GK+VLE
Sbjct: 281 EEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLE 331

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  174 bits (444), Expect = 1e-51
 Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 38/356 (10%)

Query: 27  TSCRAVVLPRFG--GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           +  + +V+ R      E + +  +  VP     ++LVR R V +N  D    +G  R   
Sbjct: 22  SMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAG--RYDP 79

Query: 85  EPLLPLILGRDISGEVAAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
               P  +G +  GEV A+G S  +  TVGQ V          G++A+Y V+     TP 
Sbjct: 80  SVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP-----GSFAEYTVVPASIATPV 134

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVS 203
           P      +   +  +  TA+ +LK    +SEG+++LV    G  G  A+Q S  + CHV 
Sbjct: 135 PSVK--PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVI 192

Query: 204 ATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK---GK-FDAVLDTIGAPETERLGLNFL 258
            TC S      + + G ++ ++Y ++ +   +K    +  D V +++G    +   ++ L
Sbjct: 193 GTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDL-AVDAL 251

Query: 259 KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR--MQ--TWYSYGIDYSYIYMRAD 314
              G  + +   +          +        LLKK   +Q              Y+   
Sbjct: 252 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNH--------YLSKY 303

Query: 315 AEGLEEIRRLSETGKLKIPVD--------KTFHMTQVREAHEAKDKRLIPGKVVLE 362
              +  +  +  +G L   VD        +   +  +  A          GK+V+E
Sbjct: 304 QAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 359

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  167 bits (424), Expect = 6e-49
 Identities = 86/372 (23%), Positives = 147/372 (39%), Gaps = 68/372 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-----GRSIF 84
           RAV L   G P  L+    + VP  K  +VL++  A  +   D  MR G           
Sbjct: 2   RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
              LP+ LG +I+G++  VG  V   + G  V  A++P                      
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPR 116

Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLL 179
                  G YA+Y ++   +   K   +   +A+ +  + +T +RA++  A +   + LL
Sbjct: 117 WLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLL 175

Query: 180 VLGGGGAVGFAAVQFSVA-SGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-- 235
           V+G GG +G  AVQ + A SG  +      +  ++    AGA+  ++ S +D    I+  
Sbjct: 176 VVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRI 235

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALG---LPIATT 289
                 DAV+D   + +T  +    L + G Y+ +           GL            
Sbjct: 236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMV-----------GLFGADLHYHAPLI 284

Query: 290 VLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEA 349
            L + +           S +  ++D      I RL+E GK+K  + KT  + +  EA + 
Sbjct: 285 TLSEIQFVG--------SLVGNQSD---FLGIMRLAEAGKVKPMITKTMKLEEANEAIDN 333

Query: 350 KDKRLIPGKVVL 361
            +     G+ VL
Sbjct: 334 LENFKAIGRQVL 345

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  165 bits (421), Expect = 7e-49
 Identities = 92/340 (27%), Positives = 136/340 (40%), Gaps = 47/340 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A VL R GGP  L   P    P+ +  EV++R  AV +N  D  MR G Y         
Sbjct: 2   KAWVLKRLGGPLELVDLP---EPEAEEGEVVLRVEAVGLNFADHLMRLGAYL---TRLHP 55

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P I G ++ G V            G+     +     +G  A+   + +  L P P  ++
Sbjct: 56  PFIPGMEVVGVV-----------EGRRYAALVP----QGGLAERVAVPKGALLPLPEGLS 100

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
             +A+A P + LTA+ ALK  A+   G+++LV    GA+G AAVQ + A G  V A    
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
              +   LA GAE+A  Y+         G  D VL+ +   E E   L  L  GG  +  
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRGKEVEE-SLGLLAHGGRLVY- 216

Query: 268 HGETAALADHYGLALGL--PIATTVLLKKRMQ---TWYSYGIDYSYIYMRADAEGLEEIR 322
                      G A G   PI    L+++ +     W +  +    +      E L  + 
Sbjct: 217 ----------IGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALV----EEALGFLL 262

Query: 323 RLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
                 +L+  V   F   +   A  A   R   GKVV+ 
Sbjct: 263 PRLG-RELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVR 301

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  157 bits (397), Expect = 9e-45
 Identities = 55/375 (14%), Positives = 105/375 (28%), Gaps = 45/375 (12%)

Query: 26  TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG------- 78
            ++ +     +  G   L +  +++ P   P+EVL+R  A  +NP D  +  G       
Sbjct: 3   HSALQLRSRIKSSGELELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTA 61

Query: 79  -------------------YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGA 119
                                         + +G + +G V   G+S  +  +  +   A
Sbjct: 62  KASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA 121

Query: 120 LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLL 179
           +        Y+ Y  +  D+    P   T AD ++     LTA   ++   R+     L+
Sbjct: 122 IGG----AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVET-MRLEGHSALV 176

Query: 180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDI-----ELA 233
                  +G    Q  +  G  +      +   D + A GA    + +S        E  
Sbjct: 177 HTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEAL 236

Query: 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADH-----YGLALGLPIAT 288
           +        D  G  +     L  ++   +             H     YG     P   
Sbjct: 237 VSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEF 296

Query: 289 TVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHE 348
                            +     R  A  L++               K   + +V +   
Sbjct: 297 NRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKTTFASHYSKEISLAEVLDLDM 356

Query: 349 AKD--KRLIPGKVVL 361
                KR    K ++
Sbjct: 357 IAVYNKRATGEKYLI 371

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  131 bits (331), Expect = 3e-35
 Identities = 75/367 (20%), Positives = 134/367 (36%), Gaps = 61/367 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           +A  L  +  P  +E   +V+ P L+   +V+VR     +   D  +  G    + +P L
Sbjct: 17  KAARLHEYNKPLRIE---DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL 73

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AV 125
           P  LG +  G +  V   V  L  G  V      T                        +
Sbjct: 74  PYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNI 133

Query: 126 RGTYADYAVLSEDELTPKPVSV---THADASAIPFAALTAWRALKCAAR-MSEGQRLLVL 181
            G +A++   S   +   P  +      + + +  A +TA+RA+K AAR +  G  + ++
Sbjct: 134 DGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIV 193

Query: 182 GGGGAVGFAAVQFSVASG-CHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIK---- 235
           G GG +G  AVQ         V A     + +      GA+  VD + +D    +     
Sbjct: 194 GVGG-LGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVD-ARRDPVKQVMELTR 251

Query: 236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK 294
               +  +D +G+  T       L R G    + G        YG  L  P    +  + 
Sbjct: 252 GRGVNVAMDFVGSQATVDYTPYLLGRMGRL-IIVG--------YGGELRFPTIRVISSEV 302

Query: 295 RMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRL 354
             +         S +    +   L E+  L+  GK+++ V     + ++ +  E  +K  
Sbjct: 303 SFEG--------SLVGNYVE---LHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGE 350

Query: 355 IPGKVVL 361
           + G+ VL
Sbjct: 351 VLGRAVL 357

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  128 bits (325), Expect = 1e-34
 Identities = 71/367 (19%), Positives = 133/367 (36%), Gaps = 64/367 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A +L +F  P  L +  +V +P+ +  EVL+R     +   D R+  G         LP
Sbjct: 5   KAALLKKFSEP--LSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQ-GFRLP 60

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AVR 126
           +ILG + +G +  VG  +  +  G  V                                 
Sbjct: 61  IILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTN 119

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE--GQRLLVLGGG 184
           G +++Y ++       K  S++  +A+ +  A  T+  A++ A        + ++++ G 
Sbjct: 120 GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGI 179

Query: 185 GAVGFAAVQFSVA--SGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-----G 236
           G +    +Q   A      +     SK   D  L  GA+   +   KD E  I       
Sbjct: 180 GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSE--MKDAESLINKLTDGL 237

Query: 237 KFDAVLDTIGAPETERLGLNFLKRGGHYMT--LHGETAALADHYGLALGLPIATTVLLKK 294
                +D +G  ET       L + G  +   + G+           + L    T +  K
Sbjct: 238 GASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR----------VSLEAFDTAVWNK 287

Query: 295 RMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRL 354
           ++                 D   LE++ RLSE+GK+K  +     +  + +A    D+  
Sbjct: 288 KLLGSNYGS--------LND---LEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGR 335

Query: 355 IPGKVVL 361
           + G+ V+
Sbjct: 336 VDGRQVI 342

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  126 bits (318), Expect = 2e-33
 Identities = 75/374 (20%), Positives = 123/374 (32%), Gaps = 74/374 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV     G   V+    ++  P   P E+L++  A  +   D  +           L P
Sbjct: 2   KAVQYTEIGSEPVVV---DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGL-P 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV---------------------------FGALHP 122
           L LG +  G VA +G  V    VG  V                            G   P
Sbjct: 58  LTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPP 117

Query: 123 -TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK-CAARMSEGQRLLV 180
                G+ A+Y ++           +    A+ +  A LT + A+      +  G   +V
Sbjct: 118 GLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVV 177

Query: 181 LGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDR-------VLAAGAEQAVDYSSKDIEL 232
           +G GG +G   +Q   A     V A      +D            GA+ AV  S      
Sbjct: 178 IGVGG-LGHVGIQILRAVSAARVIA------VDLDDDRLALAREVGADAAVK-SGAGAAD 229

Query: 233 AIKGK-----FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA 287
           AI+         AV D +GA  T       +   G          ++   +  A      
Sbjct: 230 AIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDG--------HISVVGIHAGAHAKVGF 281

Query: 288 TTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAH 347
             +     + T Y +G        R++   L E+  L+  G+L I   +TF + +   A+
Sbjct: 282 FMIPFGASVVTPY-WG-------TRSE---LMEVVALARAGRLDIHT-ETFTLDEGPAAY 329

Query: 348 EAKDKRLIPGKVVL 361
               +  I G+ V+
Sbjct: 330 RRLREGSIRGRGVV 343

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  110 bits (278), Expect = 6e-28
 Identities = 88/371 (23%), Positives = 138/371 (37%), Gaps = 73/371 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS------- 82
           +A V+  FG P  L +   V VP   P +V V+  A           SG   +       
Sbjct: 4   KAAVVRAFGAP--LTID-EVPVPQPGPGQVQVKIEA-----------SGVCHTDLHAADG 49

Query: 83  --IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------------ 116
               +P LP I G +  G V+AVG+ V  +  G  V                        
Sbjct: 50  DWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE 109

Query: 117 FGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
                  +V G Y +Y V   + +   P  V   + + I  A +T ++ LK       GQ
Sbjct: 110 KQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLK-VTDTRPGQ 168

Query: 177 RLLVLGGGGAVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIK 235
            +++ G GG  G  AVQ++ A G  V+A       ++     GAE AV+    D    ++
Sbjct: 169 WVVISGIGGL-GHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQ 227

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL 292
              G    VL T  +P+     +  ++RGG  + L+G             G PI   VL 
Sbjct: 228 KEIGGAHGVLVTAVSPKAFSQAIGMVRRGGT-IALNGLPPG-------DFGTPIFDVVLK 279

Query: 293 KKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDK 352
              ++              R+D   L+E    +  G +K  V  T  +  V +      +
Sbjct: 280 GITIRGSIVGT--------RSD---LQESLDFAAHGDVKATV-STAKLDDVNDVFGRLRE 327

Query: 353 RLIPGKVVLEF 363
             + G+VVL+F
Sbjct: 328 GKVEGRVVLDF 338

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  112 bits (282), Expect = 3e-27
 Identities = 83/329 (25%), Positives = 124/329 (37%), Gaps = 54/329 (16%)

Query: 52  PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL--ILGRDISGEVAAVGASVRS 109
             L   EV +  RA  +N  D  +  G        + P    LG + +G V   G  V  
Sbjct: 234 APLGDGEVRIAMRAAGVNFRDALIALG--------MYPGVASLGSEGAGVVVETGPGVTG 285

Query: 110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA 169
           L  G  V G      +   +   AV     +T  P   + A A+++P   LTA+ AL   
Sbjct: 286 LAPGDRVMGM-----IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDL 340

Query: 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD 229
           A +  G+ LLV    G VG AA+Q +   G  V AT       + +    E     SS+ 
Sbjct: 341 AGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVELSREHL--ASSRT 397

Query: 230 ------IELAIKGK-FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLAL 282
                    A  G+  D VL+++   E     L  L RGG ++ L G+T  + D   +A 
Sbjct: 398 CDFEQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRGGRFLEL-GKT-DVRDPVEVAD 454

Query: 283 GLPIATTVLLKKRMQTWYSYGIDYSYI-YMRAD----AEGLEEIRRLSETGKLKIPVDKT 337
             P                 G+ Y     + A      E L E+  L E   L+      
Sbjct: 455 AHP-----------------GVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTA 497

Query: 338 FHMTQVREA--HEAKDKRLIPGKVVLEFD 364
           + + Q  EA  H ++ + +  GK+VL   
Sbjct: 498 WDVRQAPEALRHLSQARHV--GKLVLTMP 524

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  106 bits (268), Expect = 2e-26
 Identities = 91/364 (25%), Positives = 150/364 (41%), Gaps = 57/364 (15%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A V+ +F  P  L+++  VE P +   EVLVR +A  +   D     G +     +P L
Sbjct: 2   KAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP---VKPKL 55

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV------------------------FGALHPTA 124
           PLI G +  G V  VG  V  L VG  V                               +
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG 184
           V G YA+Y   + D +   P +++  +A+ I  A +T ++ALK       G+ + + G G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIG 174

Query: 185 GAVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIK---GKFDA 240
           G +G  AVQ++ A G +V A   G + ++     GA+  V+   +D    +K   G   A
Sbjct: 175 G-LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA 233

Query: 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY 300
            + T  +    +   N ++RGG    L G            + +PI  TVL   ++    
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGA-CVLVGLPPE-------EMPIPIFDTVLNGIKIIGSI 285

Query: 301 SYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV 360
                      R D   L+E  + +  GK+K  + +   + ++ E  +   K  I G+VV
Sbjct: 286 VGT--------RKD---LQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVV 333

Query: 361 LEFD 364
           L  +
Sbjct: 334 LTLE 337

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  101 bits (253), Expect = 3e-24
 Identities = 76/370 (20%), Positives = 136/370 (36%), Gaps = 57/370 (15%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDT-RMRSGYGRSI 83
           +  + + V+     G   LE + ++ VP  K NE+L+  +   +   D       +    
Sbjct: 2   IPETQKGVIFYESHGK--LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLP- 57

Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------------FGA 119
               LPL+ G + +G V  +G +V+   +G                              
Sbjct: 58  --VKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHAD 115

Query: 120 LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLL 179
           L      G++  YA     +    P     A  + I  A +T ++ALK +A +  G  + 
Sbjct: 116 LSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK-SANLMAGHWVA 174

Query: 180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYS-SKDIELAIK-- 235
           + G  G +G  AVQ++ A G  V    G +   +   + G E  +D++  KDI  A+   
Sbjct: 175 ISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKA 234

Query: 236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLK 293
             G    V++   +         +++  G    L G  A      G      +   V+  
Sbjct: 235 TDGGAHGVINVSVSEAAIEASTRYVRANGT-TVLVGMPA------GAKCCSDVFNQVVKS 287

Query: 294 KRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKR 353
             +      G   SY+  RAD     E       G +K P+ K   ++ + E +E  +K 
Sbjct: 288 ISIV-----G---SYVGNRAD---TREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKG 335

Query: 354 LIPGKVVLEF 363
            I G+ V++ 
Sbjct: 336 QIVGRYVVDT 345

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 95.8 bits (239), Expect = 3e-22
 Identities = 60/272 (22%), Positives = 100/272 (36%), Gaps = 51/272 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV L        + VR NV +P+  P+++LV+  A  I   D  +  G   S      P
Sbjct: 25  KAVRLE---SVGNISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP----P 76

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHP-------------------------TA 124
           + LG +  G V   G++VR +  G  +     P                           
Sbjct: 77  VTLGHEFCGIVVEAGSAVRDIAPGARI--TGDPNISCGRCPQCQAGRVNLCRNLRAIGIH 134

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLGG 183
             G +A+Y ++   +    P+++     +   P A       +   + +  G  + +L G
Sbjct: 135 RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLA--CCLHGVD-LSGIKAGSTVAIL-G 190

Query: 184 GGAVGFAAVQFSVASGCH---VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----- 235
           GG +G   VQ +  +G     +S    +K        GA   VD S+ D+  AI      
Sbjct: 191 GGVIGLLTVQLARLAGATTVILSTRQATK-RRLAEEVGATATVDPSAGDVVEAIAGPVGL 249

Query: 236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
             G  D V++  G  ET +      K GG  +
Sbjct: 250 VPGGVDVVIECAGVAETVKQSTRLAKAGGTVV 281

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 94.6 bits (235), Expect = 3e-21
 Identities = 64/335 (19%), Positives = 120/335 (35%), Gaps = 50/335 (14%)

Query: 47   PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP--LILGRDISGEVAAVG 104
            P          + L      S+N  D  + +G         L    I G+ ++ +     
Sbjct: 1550 PLHYALPASCQDRLCSVYYTSLNFRDVMLATG--------KLSPDSIPGKWLTRDCMLGM 1601

Query: 105  ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                    G+ V G +    +    A   +L +      P + T  +A+++P    TA+ 
Sbjct: 1602 EFSGRDASGRRVMGMVPAEGL----ATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYY 1657

Query: 165  ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVD 224
            +L    RM  G+ +L+  G G VG AA+  +++ GC V  T GS      L A   Q  +
Sbjct: 1658 SLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDE 1717

Query: 225  ---YSSKD------IELAIKGK-FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAAL 274
                +S+D      +     GK  D VL+++   + +   +  L + G ++ +     + 
Sbjct: 1718 TCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQA-SVRCLAQHGRFLEIGKFDLSN 1776

Query: 275  ADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG--------LEEIRRLSE 326
                G+A+ L                   + +  I + +  E          E ++   +
Sbjct: 1777 NHALGMAVFLK-----------------NVTFHGILLDSLFEEGGATWQEVSELLKAGIQ 1819

Query: 327  TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
             G ++      F  T+V  A     +    GKVV+
Sbjct: 1820 EGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVI 1854

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 91.5 bits (228), Expect = 9e-21
 Identities = 57/294 (19%), Positives = 97/294 (32%), Gaps = 55/294 (18%)

Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR 81
             ++     A+VL +F  P V +     E+ D+    +LV   +  +   D  M  G   
Sbjct: 11  HHMMGLKAHAMVLEKFNQPLVYK---EFEISDIPRGSILVEILSAGVCGSDVHMFRG--- 64

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRSLT-----VGQEVFGALHPT------------- 123
                 LP+ILG + +G V  V    R L       G  +      T             
Sbjct: 65  EDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEP 124

Query: 124 -------------------AVRGTYADYAVLS-EDELTPKPVSVTHADASAIPFAALTAW 163
                               +RG Y+ + VL  E ++            +    +  TA+
Sbjct: 125 YLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAY 184

Query: 164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQ 221
            A         G+ +++ G G  +G   V  + + G  +V    GS + +      GA+ 
Sbjct: 185 HAFDEYPESFAGKTVVIQGAGP-LGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL 243

Query: 222 AV---DYSSKDIELAIKGK-----FDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            +   + S ++   AI         D +L+  G       G   L+RGG Y   
Sbjct: 244 TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVA 297

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 89.3 bits (222), Expect = 4e-20
 Identities = 56/377 (14%), Positives = 96/377 (25%), Gaps = 65/377 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+ + R  G +   V      P+ +  E LVRT  V +   D  + +G      E    
Sbjct: 2   KAIAVKR--GEDRPVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDH 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV----------------------------FGALH 121
           L+LG +  G V         L  G  V                            +    
Sbjct: 59  LVLGHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 122 PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA-ALTAWR--ALKCAARMSEGQRL 178
                G  +++    E  L   P S         P +    A        +A   +    
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSA 176

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRV-------LAAGAEQAVDYSSKDIE 231
            VLG G ++G   +                   DR            A   VD     +E
Sbjct: 177 FVLGNG-SLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT-YVDSRQTPVE 234

Query: 232 --LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATT 289
               +  + D + +  G P+     +  L   G                 L +    A  
Sbjct: 235 DVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGAL-------------LGVPSDWAFE 281

Query: 290 VLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAH 347
           V      +    +                      ++  K  +   V     +++   A 
Sbjct: 282 VDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAF 341

Query: 348 EAKDKRLIPGKVVLEFD 364
           +  D  +   K  +EF 
Sbjct: 342 DDDDTTI---KTAIEFS 355

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 89.2 bits (222), Expect = 4e-20
 Identities = 75/378 (19%), Positives = 129/378 (34%), Gaps = 84/378 (22%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RA+        E L +  +  VP+  P E+LVR  A SI   D  +      +      P
Sbjct: 2   RALAK--LAPEEGLTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV--------------------------FGALHPT 123
           L+ G + SG V AVG  VR   VG  V                             +   
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD 118

Query: 124 AVRGTYADYAVLSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRLLVL 181
              G +A+Y V+  +     P  +    A+ + PF  A+        A     G+ +L+ 
Sbjct: 119 ---GGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVY----AGSGVSGKSVLIT 171

Query: 182 GGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRV-----LA-AGAEQAVDYSSKDIELAI 234
            G G +G  A     ASG   +  +      D        A   A++ V+   +D+   +
Sbjct: 172 -GAGPIGLMAAMVVRASGAGPILVS------DPNPYRLAFARPYADRLVNPLEEDLLEVV 224

Query: 235 K----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLA---LGLPIA 287
           +       + +L+  G       GL  L  GG    L           G+    +   +A
Sbjct: 225 RRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARIL-----------GIPSDPIRFDLA 273

Query: 288 TTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVRE 345
             ++++         GI    I  R   +   +   L  +G++ +   +     +++ RE
Sbjct: 274 GELVMR---------GITAFGIAGRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYRE 324

Query: 346 A-HEAKDKRLIPGKVVLE 362
           A       +    KV+L+
Sbjct: 325 AFGLLASGQ--AVKVILD 340

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 88.4 bits (220), Expect = 7e-20
 Identities = 70/374 (18%), Positives = 120/374 (32%), Gaps = 71/374 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           ++VV        ++ V     +P++K  +EV V+  +  +   D       G   +    
Sbjct: 2   KSVVND---TDGIVRVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYY---- 53

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV--------------------------FGALHP 122
           P+ LG + SG + AVG+ V  L  G  V                          F     
Sbjct: 54  PITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR 113

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVL 181
               G +A+Y V+    +   P  +   D + I P        A    A+  E + ++++
Sbjct: 114 D---GGFAEYIVVKRKNVFALPTDMPIEDGAFIEPIT--VGLHAFHL-AQGCENKNVIII 167

Query: 182 GGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK---- 235
            G G +G  A+Q +VA G   V+A   S   +    + GA Q  + S             
Sbjct: 168 -GAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE 226

Query: 236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK 294
                 +L+T G P+T  L +                          +G       L   
Sbjct: 227 LRFNQLILETAGVPQTVELAVEIAGPHAQLAL---------------VGTLHQDLHLTSA 271

Query: 295 RMQTWYSYGIDY--SYIYMRADAEGLEEIR--RLSETGKLKIP--VDKTFHMTQVREAHE 348
                    +    S++   +   G E     RL    KL +   +          +A  
Sbjct: 272 TFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVR 331

Query: 349 AKDKRLIPGKVVLE 362
              +  +PGKV+L 
Sbjct: 332 DIARNAMPGKVLLI 345

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 84.9 bits (211), Expect = 1e-18
 Identities = 57/273 (20%), Positives = 97/273 (35%), Gaps = 47/273 (17%)

Query: 30  RAVVLPRFGGPEV-LEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            A++      P    E+   V+VP   P EVL++  A SI   D  +      +      
Sbjct: 6   VAIMKT---KPGYGAELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP 61

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV--------------------------FGALHP 122
           P I+G +++GEV  +G  V  + VG  V                             +  
Sbjct: 62  PQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDT 121

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVL 181
               G +A+YAV+    +   P S+    A+   P     A   +        G+ +L+ 
Sbjct: 122 D---GVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLG--NAVDTVLAGPI--SGKSVLIT 174

Query: 182 GGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDYSSKDI-----ELAI 234
            G G +G   +  + ASG   V  +  S    +     GA+  ++   +D+     ++  
Sbjct: 175 -GAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITD 233

Query: 235 KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
               D  L+  GAP+    GL  +   G    L
Sbjct: 234 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLL 266

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 58/273 (21%), Positives = 101/273 (36%), Gaps = 47/273 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            + VL        L +     +P+ K +EVL++   V I   D         + F    P
Sbjct: 6   LSAVLY---KQNDLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 61

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------- 124
           +++G + SG V  VG +V+ L  G  V  A+ P                           
Sbjct: 62  MVIGHEASGTVVKVGKNVKHLKKGDRV--AVEPGVPCRRCQFCKEGKYNLCPDLTFCATP 119

Query: 125 -VRGTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLG 182
              G  A Y V + D     P +V+  + + + P +      A +  A +  G  +LV+ 
Sbjct: 120 PDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS--VGVHACR-RAGVQLGTTVLVI- 175

Query: 183 GGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQA--VDYSSKDIELAIK---- 235
           G G +G  +V  + A G  V  T    + ++     GA+    VD + ++    I+    
Sbjct: 176 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRS 235

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
                 +  +D  G  +   +G+N  + GG  M
Sbjct: 236 AIGDLPNVTIDCSGNEKCITIGINITRTGGTLM 268

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 83.0 bits (206), Expect = 7e-18
 Identities = 59/273 (21%), Positives = 103/273 (37%), Gaps = 48/273 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            ++V+    GP  L +  N  +P+  PNEVL+R  +V I   D           F    P
Sbjct: 9   LSLVVH---GPGDLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------- 124
           ++LG + SG V  VG+SV+ L  G  V  A+ P A                         
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRV--AIEPGAPRENDEFCKMGRYNLSPSIFFCATP 122

Query: 125 -VRGTYADYAVLSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRLLVL 181
              G    +   +       P +VT  + + I P +  + A R       ++ G ++LV 
Sbjct: 123 PDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACR----RGGVTLGHKVLVC 178

Query: 182 GGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIK---- 235
            G G +G   +  + A G   V  T   +  + +    GA+  +  S +  +   +    
Sbjct: 179 -GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG 237

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
               K +  ++  GA  + + G+   + GG  +
Sbjct: 238 QLGCKPEVTIECTGAEASIQAGIYATRSGGTLV 270

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 81.3 bits (201), Expect = 3e-17
 Identities = 53/386 (13%), Positives = 108/386 (27%), Gaps = 72/386 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG--YGRSIFEPL 87
           +A+++        ++     ++      ++ +RT    I   D  + +G     ++ +  
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLD--SYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGK 59

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV--------------------------FGALH 121
             L+LG +  G V            G  V                          FG   
Sbjct: 60  DFLVLGHEAIGVVEESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAG 116

Query: 122 PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA-ALTAWRALKCAARMS------- 173
              + G   ++       L   P S+      A P A    +   +    +         
Sbjct: 117 IHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDD 176

Query: 174 ---EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-- 228
                +++LV+G G  +G          G  V      +  +       E   +Y +   
Sbjct: 177 GTLNCRKVLVVGTG-PIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSN 235

Query: 229 --DIELAIKGKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLP 285
             D      GKFD ++D  GA        +  L R G                    G  
Sbjct: 236 GYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLG---------------LFGFS 280

Query: 286 IATTV-LLKKRMQTWYSYGIDY--SYIYMRAD-AEGLEEIR--RLSETGKLKIPVDKTFH 339
            + +V L  K +Q                +    + +  +   +       K+ + KT  
Sbjct: 281 TSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVS 340

Query: 340 MTQVREA-HEAKDKRLIPGKVVLEFD 364
           +   +E     ++K     K+ + ++
Sbjct: 341 INDEKELLKVLREKEHGEIKIRILWE 366

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 74.5 bits (184), Expect = 4e-15
 Identities = 61/299 (20%), Positives = 101/299 (33%), Gaps = 87/299 (29%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
             A V P  G    L+    +++   + +EVLV+  A  +   D  +R         PL 
Sbjct: 7   IIAAVTPCKGADFELQ---ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQ---KYPVPL- 59

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV-----------------------FGALHPTAV 125
           P +LG + SG + A+G +V  L VG  V                       F   + +  
Sbjct: 60  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 119

Query: 126 R----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAAL--- 160
                                   ++A YA+  E        +         P   L   
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRE-------NNTVKVTKDV-PIELLGPL 171

Query: 161 -----TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRV 214
                T   A   A +++     +  G G  VG +A+  +   G   + A      +D V
Sbjct: 172 GCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIA------VDIV 224

Query: 215 -----LAA--GAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGG 262
                LA   GA   ++  ++D   AIK    G  +  L++ G+PE  + G++ L   G
Sbjct: 225 ESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 283

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 72.0 bits (177), Expect = 3e-14
 Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 34/278 (12%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           ++ +A V+ +        V+  + + DL   +VLVR    S+N  D       G+ +   
Sbjct: 2   SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKT- 59

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVF------GALHPTAVRGTYADYAVLSEDEL 140
             P + G D++G V +  +       G EV       G  H     G Y++YA L  + L
Sbjct: 60  -YPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHF----GGYSEYARLHGEWL 112

Query: 141 TPKPVSVTHADASAIPFAALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA 197
            P P  +T  +A AI  A  TA      L+      E   +LV G  G VG  AV     
Sbjct: 113 VPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAK 172

Query: 198 SGCHVSATCGSKS-IDRVLAAGAEQAVD---YSSKDIELAIKGKFDAVLDTIGAPETERL 253
            G  V A+ G  +  D +   GA++ +      ++ I    K ++ A +D +G      +
Sbjct: 173 RGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATV 232

Query: 254 GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
            L+ ++ GG          A++   GL  G  + TTV 
Sbjct: 233 -LSRMRYGG--------AVAVS---GLTGGAEVPTTVH 258

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 71.2 bits (175), Expect = 5e-14
 Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 34/280 (12%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           ++T  +A+   +      + V+  +   DL  + VL++     IN  D       G  + 
Sbjct: 1   MSTLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR 59

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVF------GALHPTAVRGTYADYAVLSED 138
           E   PLILG D +G V +  ++      G EV       G        G  ++YA +  D
Sbjct: 60  E--YPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYELGVSRD----GGLSEYASVPGD 111

Query: 139 ELTPKPVSVTHADASAIPFAALTA---WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
            L P P +++  +A     A  TA      L+      E   +LV G  G VG  AV   
Sbjct: 112 WLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSML 171

Query: 196 VASGCHVSATCGSKS-IDRVLAAGAEQAVD---YSSKDIELAIKGKFDAVLDTIGAPETE 251
              G  V A+ G++   D +   GA + +         ++   K ++   +D +G  +  
Sbjct: 172 NKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLA 231

Query: 252 RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
            L L+ ++ GG        + A++   GL  G  +  TV 
Sbjct: 232 SL-LSKIQYGG--------SVAVS---GLTGGGEVPATVY 259

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 71.2 bits (175), Expect = 5e-14
 Identities = 70/275 (25%), Positives = 107/275 (38%), Gaps = 36/275 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A++L +  G  +  V+ ++E   L   +V V     S+N  D    +G G+ I     P
Sbjct: 2   QALILEQQDGKTLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRH--FP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF------GALHPTAVRGTYADYAVLSEDELTPK 143
           +I G D +G V A  +       GQEV       G  H     G  A+ A +  D L   
Sbjct: 59  MIPGIDFAGTVHA--SEDPRFHAGQEVLLTGWGVGENHW----GGLAERARVKGDWLVAL 112

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQ-----RLLVLGGGGAVGFAAVQFSVAS 198
           P  ++  +A  I  A  TA   L   A    G       ++V G  G VG  AV      
Sbjct: 113 PAGLSSRNAMIIGTAGFTA--MLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKL 170

Query: 199 GCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAI-KGKFDAVLDTIGAPETERLGLN 256
           G  V+A  G +S    + + GA + +          + K  +   +DT+G     ++ L 
Sbjct: 171 GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKV-LA 229

Query: 257 FLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
            +  GG          A     GLA G  + TTV+
Sbjct: 230 QMNYGG--------CVAAC---GLAGGFALPTTVM 253

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 71.3 bits (175), Expect = 8e-14
 Identities = 61/381 (16%), Positives = 114/381 (29%), Gaps = 70/381 (18%)

Query: 36  RFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRM----RSGYGRSIFEPLLPL 90
           +      + V   V  P + KP E++++ +A  I   D  M      GY         P+
Sbjct: 35  KVWRYPEVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPV 93

Query: 91  ILGRDISGEVAAVGASV------RSLTVGQEVFGALHP---------------------- 122
            LG + SG V   G         +   +G+ V                            
Sbjct: 94  TLGHEFSGVVVEAGPEAINRRTNKRFEIGEPV--CAEEMLWCGHCRPCAEGFPNHCENLN 151

Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AALT-----AWRALKCA-AR 171
                V G +A+Y  +               +     F   +L      A+ A+      
Sbjct: 152 ELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGD-RLFLAGSLVEPTSVAYNAVIVRGGG 210

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDYSSKD 229
           +  G  +++L GGG +G AAV     +G   V  +  S+   +     GA+  +D + ++
Sbjct: 211 IRPGDNVVIL-GGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKEN 269

Query: 230 IELAIKGK-----FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGL 284
              A+            L+  G P+     +  +          G  A +A        +
Sbjct: 270 FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRA-----RGINATVAIVARADAKI 324

Query: 285 PIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETG-KLKIPVDKTFHMTQV 343
           P+   V   +                  +       +  L  +G  +   + KT  M ++
Sbjct: 325 PLTGEVFQVR--------RAQIVGSQGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEI 376

Query: 344 REAHEAKDKRLIPGKVVLEFD 364
            E  +         KV +  +
Sbjct: 377 PEYIKRLQTDKSLVKVTMLNE 397

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 66.8 bits (164), Expect = 3e-13
 Identities = 24/69 (34%), Positives = 36/69 (52%)

Query: 140 LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG 199
           + P P ++   +A+    A LTAW +L    R+S G+R+L+    G VG AAV  +   G
Sbjct: 4   VVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIG 63

Query: 200 CHVSATCGS 208
             +  T GS
Sbjct: 64  ARIYTTAGS 72

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 67.6 bits (166), Expect = 8e-13
 Identities = 49/223 (21%), Positives = 81/223 (36%), Gaps = 42/223 (18%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
            ++  G S +    P++ G ++ GEV  VG+ V   TVG  V                  
Sbjct: 54  TKNDLGMSNY----PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERD 109

Query: 117 -----------FGALHPTAVR--GTYADYAVLSEDELTPKPVSVTHADASAIPF--AALT 161
                      +  ++       G +A   V+ +  +   P  +    A+  P   A +T
Sbjct: 110 LEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA--PLLCAGVT 167

Query: 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAAGA 219
            +  L        G R  +LG GG VG   V+ + A G HV+   +   K  + +   GA
Sbjct: 168 VYSPLSHFGLKQPGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA 226

Query: 220 EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           +  V  S +     +    D V+DT+         L+ LK  G
Sbjct: 227 DDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDG 269

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 46/268 (17%), Positives = 83/268 (30%), Gaps = 51/268 (19%)

Query: 39  GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISG 98
                 +    +  +LK  EV V  R+  I   D                  +LG + +G
Sbjct: 23  SEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAG 82

Query: 99  EVAAVGASVRSLTVGQEV--------------------------FGALHPTAVRGTYADY 132
           EV AV  SV+S+ VG  V                          F +  P  V G    Y
Sbjct: 83  EVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPP--VPGLLRRY 140

Query: 133 AVLSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRLLVLGGGGAVGFA 190
                        ++++ + + + P + AL   +     A +  G  +L+  G G +G  
Sbjct: 141 VNHPAVWCHKIG-NMSYENGAMLEPLSVALAGLQ----RAGVRLGDPVLIC-GAGPIGLI 194

Query: 191 AVQFSVASGC-HVSAT------------CGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK 237
            +  + A+G   +  T               + +          A + + K +E     +
Sbjct: 195 TMLCAKAAGACPLVITDIDEGRLKFAKEICPEVV--THKVERLSAEESAKKIVESFGGIE 252

Query: 238 FDAVLDTIGAPETERLGLNFLKRGGHYM 265
               L+  G   +    +  +K GG   
Sbjct: 253 PAVALECTGVESSIAAAIWAVKFGGKVF 280

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 44/224 (19%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
           +RS +  +++    P + G +I G V AVG  V     G  V                  
Sbjct: 67  VRSEWAGTVY----PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDG 122

Query: 117 -----------FGALHP---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AAL 160
                      + +  P       G Y+   V+ E  +           A A P   A +
Sbjct: 123 LENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA-PLLCAGI 181

Query: 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAAG 218
           T +  L+   +   G+++ V+G GG +G   ++ + A G HV A  T  +K      A G
Sbjct: 182 TTYSPLR-HWQAGPGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALG 238

Query: 219 AEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           A++ V+  + D   A    FD +L+T+ AP         LKR G
Sbjct: 239 ADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDG 282

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 66.8 bits (164), Expect = 2e-12
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 42/223 (18%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
           +++ +G S++    PL+ G +I GEV  VG+ V+ + VG +V                  
Sbjct: 61  IKNDWGFSMY----PLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCAND 116

Query: 117 -----------FGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AALT 161
                      + +++   T   G Y+++ V +E  +   P ++     +  P   A +T
Sbjct: 117 LENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGA--PLLCAGIT 174

Query: 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAAGA 219
            +  LK       G+ + ++G GG +G  AV+F+ A G  V+   T  SK  + +   GA
Sbjct: 175 VYSPLKYFGLDEPGKHIGIVGLGG-LGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA 233

Query: 220 EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           +  +    ++   A  G  D ++DT+ A          LK  G
Sbjct: 234 DSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHG 276

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 63.7 bits (156), Expect = 1e-11
 Identities = 47/200 (23%), Positives = 70/200 (35%), Gaps = 35/200 (17%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108
           VE+P LK  EVL+    +S++P    MR             L  G  + G+   V   V 
Sbjct: 31  VELPPLKNGEVLLEALFLSVDPY---MR---IA-----SKRLKEGAVMMGQ--QVARVVE 77

Query: 109 S----LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV-THADASA------IPF 157
           S       G  V         +  +  + +     L             S       +P 
Sbjct: 78  SKNSAFPAGSIVLA-------QSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMP- 129

Query: 158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA 216
             LTA+  L     +  G+ +LV    GAVG    Q +   GC V    GS   I  +  
Sbjct: 130 -GLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ 188

Query: 217 AGAEQAVDY-SSKDIELAIK 235
            G + A +Y +   +E A+K
Sbjct: 189 IGFDAAFNYKTVNSLEEALK 208

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 61.9 bits (151), Expect = 6e-11
 Identities = 50/233 (21%), Positives = 84/233 (36%), Gaps = 37/233 (15%)

Query: 26  TTSCRAVVL---PRFGG---PEVLEVRPNVEVPD-LKPNEVLVRTRAVSINP-LDTRMRS 77
               + VVL   P   G    E   +   V +PD +   +V VRT  +S++P +  RM  
Sbjct: 6   AMIVQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNE 64

Query: 78  GYGRSIFEPLLPLILGRDISGEVAAVGASVRS----LTVGQEVFGALHPTAVRGTYADYA 133
             G        P  L + + G    +G    S    LT G  V     P      +    
Sbjct: 65  DTGTDYIT---PWQLSQVVDGG--GIGIIEESKHTNLTKGDFVTSFYWP------WQTKV 113

Query: 134 VLSEDELTPKPVSVTHADASA------IPFAALTAWRALKCAARMSEGQR--LLVLGGGG 185
           +L  + L      +     S       +P   LT+   ++    ++ G    ++V G  G
Sbjct: 114 ILDGNSLEKVDPQLVDGHLSYFLGAIGMP--GLTSLIGIQEKGHITAGSNKTMVVSGAAG 171

Query: 186 AVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA-AGAEQAVDYSSKDIELAIK 235
           A G  A Q     GC  V   CG+      + +  G + A++Y   ++   ++
Sbjct: 172 ACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLR 224

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 59.9 bits (146), Expect = 3e-10
 Identities = 47/235 (20%), Positives = 82/235 (34%), Gaps = 42/235 (17%)

Query: 26  TTSCRAVVLPRF--GGPE----VLEVRPNVEVPDLKPNEVLVRTRAVSINP-LDTRMR-- 76
           T + + V+L  +  G P                    N VLV+   +S +P +  RM   
Sbjct: 2   TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKP 61

Query: 77  SGYGRSIFEPLLPLILGRDISGEV---AAVGASVRS----LTVGQEVFGALHPTAVRGTY 129
                ++ +   P        G+      V   + S       G  ++G          +
Sbjct: 62  DPSTAALAQAYTP--------GQPIQGYGVSRIIESGHPDYKKGDLLWG-------IVAW 106

Query: 130 ADYAVLSEDELTPKPVSVTHADASA------IPFAALTAWRALKCAARMSEGQRLLVLGG 183
            +Y+V++        +  T    S       +P   +TA+          EG+ + V   
Sbjct: 107 EEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMP--GMTAYAGFYEVCSPKEGETVYVSAA 164

Query: 184 GGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA-AGAEQAVDY-SSKDIELAIK 235
            GAVG    Q +   GC+V  + GSK  +D +    G + A +Y    D+  A+K
Sbjct: 165 SGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALK 219

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 46/225 (20%), Positives = 82/225 (36%), Gaps = 51/225 (22%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
             S +   I+    P+I G +I+G +  VG  V+   +G  V                  
Sbjct: 49  AYSEWKEGIY----PMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEH 104

Query: 117 -----------FGALHP----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AA 159
                      +  L          G Y++  V+ E+ +     +      +  P   A 
Sbjct: 105 QEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA--PLLCAG 162

Query: 160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAA 217
           +T +  LK  +++++G ++ V G GG +G  AV+++VA G  VS       K  D  L+ 
Sbjct: 163 ITTYSPLK-FSKVTKGTKVGVAGFGG-LGSMAVKYAVAMGAEVSVFARNEHKKQD-ALSM 219

Query: 218 GAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           G +     +        K + D ++ TI      +  L  L   G
Sbjct: 220 GVKHFY--TDPK---QCKEELDFIISTIPTHYDLKDYLKLLTYNG 259

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 58.8 bits (143), Expect = 7e-10
 Identities = 49/222 (22%), Positives = 77/222 (34%), Gaps = 65/222 (29%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V      P  LE    + V   K +EV ++  A  I   D+ +      S F    
Sbjct: 10  CKAAVAWEPHKPLSLE---TITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF---- 62

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVF---------------------GALHPTAVRG 127
           P+ILG +  G V ++GA V  +  G +V                            A  G
Sbjct: 63  PVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTG 122

Query: 128 -----------------------TYADYAVLSEDELTPKPVSVTHADASAIPFAAL---- 160
                                  T+ +Y V+++       ++V   D  A   + L    
Sbjct: 123 LMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD-------IAVAKIDPKAPLESCLIGCG 175

Query: 161 --TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
             T + A    A+++ G    V G GG VGF+A+    A+G 
Sbjct: 176 FATGYGAAVNTAKVTPGSTCAVFGLGG-VGFSAIVGCKAAGA 216

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 45/216 (20%), Positives = 71/216 (32%), Gaps = 51/216 (23%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V    G P  +E    +EV   K +EV ++  A ++   D    SG   +  E   
Sbjct: 7   CKAAVAWEAGKPLSIE---EIEVAPPKAHEVRIKIIATAVCHTDAYTLSG---ADPEGCF 60

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP----------------TAVR------ 126
           P+ILG   +G V +VG  V  L  G  V     P                  +R      
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 127 ----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T+++Y V+++  +              +     T + 
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           A    A++  G    V G GG VG A +     +G 
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGG-VGLAVIMGCKVAGA 215

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 41/220 (18%), Positives = 72/220 (32%), Gaps = 56/220 (25%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A +  + G P  +E    +EV   K  EV ++  A  + P D            + L 
Sbjct: 9   CKAAIAWKTGSPLCIE---EIEVSPPKACEVRIQVIATCVCPTDINATDPK----KKALF 61

Query: 89  PLILGRDISGEVAAVGASVRSLTVG-------------------------QEVFGALHPT 123
           P++LG + +G V +VG  V +   G                          ++    +PT
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 124 AVRG-----------------------TYADYAVLSEDELTPKPVSVTHADASAIPFAAL 160
             +                        +++ Y V+SE  L              I     
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFS 181

Query: 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           + + A    A+++ G    V G G  VG +A+     +G 
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGC-VGLSAIIGCKIAGA 220

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 44/227 (19%), Positives = 73/227 (32%), Gaps = 48/227 (21%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS-LTVGQEV----------------- 116
               +G        PL++G +I G+V  +G    S L VGQ V                 
Sbjct: 53  AAGHWGNMKM----PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKN 108

Query: 117 ------------FGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AAL 160
                       +   +      +G YA+Y  + E  + P P ++    A+  P     L
Sbjct: 109 DNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAA--PLLCGGL 166

Query: 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAAG 218
           T +  L        G+++ ++G GG +G      S A G           K  D  +  G
Sbjct: 167 TVYSPLV-RNGCGPGKKVGIVGLGG-IGSMGTLISKAMGAETYVISRSSRKRED-AMKMG 223

Query: 219 AEQAVDYS-SKDIELAIKGKFDAVLDTIGAPETERLG--LNFLKRGG 262
           A+  +      D        FD ++    +            +K GG
Sbjct: 224 ADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGG 270

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 44/224 (19%), Positives = 71/224 (31%), Gaps = 67/224 (29%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V      P V+E    +EV     NE+ ++  A  +   D            +   
Sbjct: 9   CKAAVAWEANKPLVIE---EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH---KDGF 62

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVF---------------------GALHPTAVRG 127
           P++LG + +G V +VG  V     G++V                                
Sbjct: 63  PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 128 -----------------------TYADYAVLSEDELTPKPVSVTHADASAIPF--AAL-- 160
                                  T++ Y V+++       ++V   D SA P     L  
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQ-------IAVAKIDPSA-PLDTVCLLG 174

Query: 161 ----TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
               T + A    A++  G    V G G  VG AAV    ++G 
Sbjct: 175 CGVSTGFGAAVNTAKVEPGSTCAVFGLGA-VGLAAVMGCHSAGA 217

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 9e-08
 Identities = 52/370 (14%), Positives = 87/370 (23%), Gaps = 158/370 (42%)

Query: 3   ILKARKSANDYLVSPLRFVR-------F------LVTTSCRAVV---------------- 33
           +LK++   N  LV  L  V+       F      L+TT  + V                 
Sbjct: 237 LLKSKPYENCLLV--LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294

Query: 34  LPRFGGPEVLEVRP---NVEVPDLKPNEVLVRTRAVSINPL----------DTRMRSGYG 80
                  EV  +     +    DL P E       ++ NP           D        
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDL-PRE------VLTTNPRRLSIIAESIRDGLATWDNW 347

Query: 81  RSI-FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE 139
           + +  + L  +I             +S+  L           P   R  +   +V     
Sbjct: 348 KHVNCDKLTTII------------ESSLNVLE----------PAEYRKMFDRLSVFPPSA 385

Query: 140 LTPKPVSVTHADASAIPFAALTA-WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS 198
                          IP   L+  W  +                        +    V +
Sbjct: 386 H--------------IPTILLSLIWFDVI----------------------KSDVMVVVN 409

Query: 199 GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFL 258
             H        S    L     +    S   I L +K K +                   
Sbjct: 410 KLH------KYS----LVEKQPKESTISIPSIYLELKVKLE------------------- 440

Query: 259 KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI-Y--MRAD- 314
               +   LH    ++ DHY +         +         Y     YS+I +     + 
Sbjct: 441 ----NEYALH---RSIVDHYNIPKTFDSDDLIPPYLDQ---YF----YSHIGHHLKNIEH 486

Query: 315 AEGLEEIRRL 324
            E +   R +
Sbjct: 487 PERMTLFRMV 496

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 50.6 bits (122), Expect = 3e-07
 Identities = 52/289 (17%), Positives = 77/289 (26%), Gaps = 84/289 (29%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSI--------NPLDTRMRSGYGR 81
           +            +      E P   P + +VR  AV+                R     
Sbjct: 2   KGFA---MLSIGKVGWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNM-- 55

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------------- 116
                    ILG +  GEV  VG+ V+    G  V                         
Sbjct: 56  ---------ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGM 106

Query: 117 FGALHPT---------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
                 +               AD        L   P  +    A  IP    T +   +
Sbjct: 107 LAGWKFSNVKDGVFGEFFHVNDADMN------LAHLPKEIPLEAAVMIPDMMTTGFHGAE 160

Query: 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSIDRV-------LAAGA 219
             A +  G  + V+ G G VG  +V  +   G   + A      +          L  GA
Sbjct: 161 -LANIKLGDTVCVI-GIGPVGLMSVAGANHLGAGRIFA------VGSRKHCCDIALEYGA 212

Query: 220 EQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGGH 263
              ++Y + DI   I     GK  D V+   G   T    +  +K G  
Sbjct: 213 TDIINYKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSD 261

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 49.5 bits (119), Expect = 8e-07
 Identities = 61/301 (20%), Positives = 103/301 (34%), Gaps = 90/301 (29%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A VL     P  +E    VEV   K +EV ++  A  I   D  + SG   +      
Sbjct: 9   CKAAVLWEEKKPFSIE---EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL---- 61

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVF---------------------GALHPTAVRG 127
           P+I G + +G V ++G  V ++  G +V                           +  RG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121

Query: 128 -----------------------TYADYAVLSEDELTPKPVSVTHADASAIPF--AAL-- 160
                                  T++ Y V+ E       +SV   DA++ P     L  
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDE-------ISVAKIDAAS-PLEKVCLIG 173

Query: 161 ----TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----- 211
               T + +    A++++G    V G GG VG + +    A+G        ++ I     
Sbjct: 174 CGFSTGYGSAVKVAKVTQGSTCAVFGLGG-VGLSVIMGCKAAGA-------ARIIGVDIN 225

Query: 212 ----DRVLAAGAEQAVD--YSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG 261
                +    GA + V+     K I+  +     G  D   + IG  +T    L+  +  
Sbjct: 226 KDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA 285

Query: 262 G 262
            
Sbjct: 286 Y 286

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 13/92 (14%)

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA----------TCGSKSIDRVLAAGAE- 220
           M    R+L++G  G +G    + S+  G               +  ++ ++   A+GA  
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60

Query: 221 QAVDYSSKD-IELAIKGKFDAVLDTIGAPETE 251
                     +  A+K   D V+ T+G+ + E
Sbjct: 61  VHGSIDDHASLVEAVKN-VDVVISTVGSLQIE 91

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 12/91 (13%)

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHV---------SATCGSKSIDRVLAAGAE-Q 221
           M +  R+L++GG G +G   V  S++ G            S     + +      GA+  
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60

Query: 222 AVDYSSKD-IELAIKGKFDAVLDTIGAPETE 251
                    +  A+K   D V+  +      
Sbjct: 61  EASLDDHQRLVDALKQ-VDVVISALAGGVLS 90

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	364
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.87
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.86
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.71
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.54
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.35
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.33
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.3
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.28
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.14
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.04
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.99
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.97
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.86
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.8
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.79
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.73
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.68
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.67
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.54
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.52
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.51
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.5
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.5
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.47
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.47
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.41
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.38
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.36
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.36
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.36
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.35
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.33
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.33
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.32
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.32
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.31
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.29
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.29
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.28
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.26
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.24
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	97.23
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.23
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.23
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.23
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.22
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.21
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.2
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.2
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.19
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.18
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.17
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.16
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.15
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.15
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.15
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.15
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.14
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.14
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.13
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.13
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.1
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	97.09
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.08
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	97.08
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.08
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.05
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.05
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.04
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.03
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.02
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.02
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.02
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.01
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.99
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.99
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.98
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.97
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.96
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.94
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.94
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.93
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.93
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.93
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.92
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.92
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.91
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.91
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.9
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.9
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.9
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.89
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.89
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.88
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.88
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.87
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.86
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.85
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.85
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.85
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.83
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.83
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.82
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.82
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.82
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.81
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.81
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.81
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.79
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.79
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.79
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.78
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.78
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.78
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.76
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.76
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.76
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.76
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.75
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.75
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.74
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.73
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.73
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.73
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.72
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.72
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.72
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.72
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.71
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.71
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.7
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.7
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.7
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.7
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.69
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.68
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.68
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.67
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.66
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.66
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.66
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.66
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.66
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.66
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.65
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.65
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.65
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.65
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.64
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.64
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.64
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.63
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.63
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.62
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.62
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.61
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.61
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.61
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.6
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.6
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.58
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.57
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.57
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.57
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.56
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.55
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.55
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.55
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.55
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.54
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.53
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.53
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.53
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.52
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.51
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.51
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.51
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.5
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.5
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.5
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.5
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.49
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.49
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.49
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.49
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.48
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.48
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.48
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.47
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.47
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.46
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.46
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.46
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.46
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.46
1spx_A	278	Short-chain reductase family member (5L265); paral	96.45
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.44
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.44
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.44
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.43
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.43
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.42
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.42
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.41
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.4
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.39
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.39
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.38
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.38
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.38
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.38
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.37
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.37
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.36
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.36
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.36
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.34
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.34
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.33
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.32
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.32
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.31
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.3
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.3
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.3
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.27
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.27
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.27
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.27
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.25
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.25
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.25
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.25
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.25
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.24
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.23
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.23
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.21
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.21
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.21
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.2
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.19
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.19
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.19
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.19
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.18
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.18
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.17
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.16
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.15
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.15
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.14
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.14
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.14
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.13
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.13
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.13
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.12
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.11
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.11
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.11
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.11
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.11
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.11
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.09
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.08
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.07
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.07
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.05
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.04
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.04
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.04
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.04
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.03
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.03
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.03
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.03
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.02
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.01
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.01
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.0
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.99
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.99
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.97
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.96
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	95.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.96
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.96
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	95.93
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.92
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.92
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.91
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.91
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.89
2b25_A	336	Hypothetical protein; structural genomics, methyl	95.88
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	95.88
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.87
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	95.86
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.84
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.84
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.83
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.83
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	95.83
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	95.82
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	95.82
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.8
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.79
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	95.79
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.78
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.78
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.78
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.77
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.75
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.73
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.72
4had_A	350	Probable oxidoreductase protein; structural genomi	95.71
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.71
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.71
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.7
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.67
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	95.67
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.65
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.65
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.64
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.64
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.64
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	95.63
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.62
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.61
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.6
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.6
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.59
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.58
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.57
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.57
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.52
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.51
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.5
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.49
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.46
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.45
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	95.44
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.44
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.42
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.42
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	95.39
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	95.36
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	95.35
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.34
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.32
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.32
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.31
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.31
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	95.3
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.3
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.29
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.29
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.28
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.28
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.26
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.26
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.25
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.23
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.23
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.22
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	95.21
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.21
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.18
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.16
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.15
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.13
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.13
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	95.11
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.11
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.1
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.1
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.1
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.07
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.05
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.02
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.01
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.01
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.01
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	94.98
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	94.97
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	94.94
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	94.92
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	94.91
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	94.91
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	94.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	94.9
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	94.89
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	94.89
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	94.88
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	94.87
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	94.87
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	94.86
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	94.86
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	94.85
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	94.84
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	94.83
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.81
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	94.79
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	94.77
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	94.77
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	94.76
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	94.73
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	94.73
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	94.71
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.69
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.68
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	94.68
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	94.66
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	94.66
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	94.66
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.65
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	94.64
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	94.64
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	94.64
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	94.63
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	94.61

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.1e-56  Score=410.99  Aligned_cols=314  Identities=27%  Similarity=0.436  Sum_probs=278.2

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccC--CccccCCCCCcccccceeEEEEeec
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY--GRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~--~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      ++|||+++.++++++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.  .+......+|+++|||++|+|+++|
T Consensus         5 ~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            5 KEMKAIQFDQFGPPKVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             CEEEEEEESSSCSGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             ccceEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            47999999999999999999 99999999999999999999999999999883  2111234789999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCC
Q 017901          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~  184 (364)
                      +++++|++||||++.......+|+|+||++++.+.++++|+++++++||+++++++|||+++ +.+++++|++|+|+||+
T Consensus        84 ~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~  162 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGA  162 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTT
T ss_pred             CCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCC
Confidence            99999999999999864333579999999999999999999999999999999999999999 78999999999999999


Q ss_pred             chHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChh-HHHHhcCCccEEEECCCCchhHHHHHhhccCCCE
Q 017901          185 GAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH  263 (364)
Q Consensus       185 g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~  263 (364)
                      |++|++++|+|+.+|++|++++++++++.++++|+++++|+++.+ +.+.+.+ +|++|||+|++ ....++++++++|+
T Consensus       163 G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g-~D~v~d~~g~~-~~~~~~~~l~~~G~  240 (321)
T 3tqh_A          163 GGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTP-VDAVIDLVGGD-VGIQSIDCLKETGC  240 (321)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSC-EEEEEESSCHH-HHHHHGGGEEEEEE
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccC-CCEEEECCCcH-HHHHHHHhccCCCE
Confidence            999999999999999999999877777889999999999998887 7777767 99999999998 66999999999999


Q ss_pred             EEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccH
Q 017901          264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQV  343 (364)
Q Consensus       264 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~  343 (364)
                      ++.+|..              ....  .    ......+++++.++....+.++++++++++++|++++.++++|+|+|+
T Consensus       241 iv~~g~~--------------~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~  300 (321)
T 3tqh_A          241 IVSVPTI--------------TAGR--V----IEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISRIFQLSEA  300 (321)
T ss_dssp             EEECCST--------------THHH--H----HHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSCCCEEEEECGGGH
T ss_pred             EEEeCCC--------------Cchh--h----hhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcccccccEEcHHHH
Confidence            9999865              1110  1    113456777887765555688999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCeEEEEcC
Q 017901          344 REAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       344 ~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ++||+.+.+++..||+|++++
T Consensus       301 ~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          301 VTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             HHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHHHHcCCCCceEEEEeC
Confidence            999999999999999999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.7e-55  Score=408.12  Aligned_cols=320  Identities=30%  Similarity=0.436  Sum_probs=278.5

Q ss_pred             ceecccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEE
Q 017901           20 FVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGE   99 (364)
Q Consensus        20 ~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   99 (364)
                      |.+.+||++|||+++.++|+++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++.  +..+|.++|||++|+
T Consensus        20 ~~~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~   96 (353)
T 4dup_A           20 FQSMSLPQEMRFVDLKSFGGPDVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP--PKDASPILGLELSGE   96 (353)
T ss_dssp             ---CCCCSSEEEEEESSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCC--CTTSCSSSCCEEEEE
T ss_pred             eecCCCChheeEEEEccCCCccceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCccccccEEE
Confidence            445579999999999999999999999 99999999999999999999999999999997543  235789999999999


Q ss_pred             EEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEE
Q 017901          100 VAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLL  179 (364)
Q Consensus       100 V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  179 (364)
                      |+++|+++++|++||||+++..    +|+|+||+++|.+.++++|+++++++||+++++++|||+++.+.+++++|++|+
T Consensus        97 V~~vG~~v~~~~vGdrV~~~~~----~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl  172 (353)
T 4dup_A           97 IVGVGPGVSGYAVGDKVCGLAN----GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVL  172 (353)
T ss_dssp             EEEECTTCCSCCTTCEEEEECS----SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred             EEEECCCCCCCCCCCEEEEecC----CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEE
Confidence            9999999999999999998764    699999999999999999999999999999999999999998889999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHH
Q 017901          180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLG  254 (364)
Q Consensus       180 i~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~  254 (364)
                      |+||+|++|++++|+|+..|++|+++++++++ +.++++|++.++++++.++.+.+.    +++|++|||+|++ .+..+
T Consensus       173 V~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~  251 (353)
T 4dup_A          173 IHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA-YFERN  251 (353)
T ss_dssp             ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG-GHHHH
T ss_pred             EEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH-HHHHH
Confidence            99989999999999999999999999877665 888999999999998877666554    2399999999997 89999


Q ss_pred             HhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-H--------HHHHHHHHHH
Q 017901          255 LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-A--------EGLEEIRRLS  325 (364)
Q Consensus       255 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~  325 (364)
                      +++++++|+++.+|....           ....     .++...++.+++++.+++.... .        +.++++++++
T Consensus       252 ~~~l~~~G~iv~~g~~~~-----------~~~~-----~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~  315 (353)
T 4dup_A          252 IASLAKDGCLSIIAFLGG-----------AVAE-----KVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLL  315 (353)
T ss_dssp             HHTEEEEEEEEECCCTTC-----------SEEE-----EEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHhccCCEEEEEEecCC-----------Cccc-----CCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHH
Confidence            999999999999996511           0100     0111245678899999876422 1        1277899999


Q ss_pred             HcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          326 ETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       326 ~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++|++++.++++|+|+|+++||+.+.+++..||+|+++
T Consensus       316 ~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          316 EAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999999999999999999999999999985

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=3.7e-55  Score=407.44  Aligned_cols=319  Identities=26%  Similarity=0.351  Sum_probs=275.5

Q ss_pred             ceecccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEE
Q 017901           20 FVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGE   99 (364)
Q Consensus        20 ~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   99 (364)
                      +.+.+||++|||+++.++ +++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++.  ...+|+++|||++|+
T Consensus        19 ~~~~~m~~~mkA~~~~~~-~~~~l~~~-e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~GhE~~G~   94 (363)
T 3uog_A           19 YFQSMMSKWMQEWSTETV-APHDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL--DLAFPFVPASDMSGV   94 (363)
T ss_dssp             ----CCCSEEEEEEBSCT-TTTCCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC--CCCSSBCCCCEEEEE
T ss_pred             EEeccCchhhEEEEEccC-CCCCcEEE-eeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcCcccceEEE
Confidence            345578999999999988 56779999 99999999999999999999999999999986532  346899999999999


Q ss_pred             EEeecCCCCCCCCCCEEEEecC--------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchH
Q 017901          100 VAAVGASVRSLTVGQEVFGALH--------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       100 V~~vG~~~~~~~~Gd~V~~~~~--------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      |+++|+++++|++||||++...                    ....+|+|+||+++|.+.++++|+++++++||++++++
T Consensus        95 V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  174 (363)
T 3uog_A           95 VEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAG  174 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHH
T ss_pred             EEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHH
Confidence            9999999999999999998721                    11256999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---  235 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---  235 (364)
                      +|||+++.+.+++++|++|||+| +|++|++++|+|+..|++|+++++++++ +.++++|+++++|.+..++.+.++   
T Consensus       175 ~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~  253 (363)
T 3uog_A          175 LTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALT  253 (363)
T ss_dssp             HHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHh
Confidence            99999997789999999999999 8999999999999999999999877654 889999999999955566666554   


Q ss_pred             -C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          236 -G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       236 -g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                       + ++|++|||+|+. .+..++++++++|+++.+|....           ...      .++...++.+++++.+++.. 
T Consensus       254 ~g~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~-----------~~~------~~~~~~~~~~~~~i~g~~~~-  314 (363)
T 3uog_A          254 GDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEG-----------FEV------SGPVGPLLLKSPVVQGISVG-  314 (363)
T ss_dssp             TTCCEEEEEEETTSS-CHHHHHHHEEEEEEEEEECCCSS-----------CEE------CCBTTHHHHTCCEEEECCCC-
T ss_pred             CCCCceEEEECCChH-HHHHHHHHhhcCCEEEEEecCCC-----------ccc------CcCHHHHHhCCcEEEEEecC-
Confidence             2 399999999976 99999999999999999997521           000      11122456789999998765 


Q ss_pred             CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +.++++++++++++|++++.++++|+|+|+++||+.+.+++ .||+||++
T Consensus       315 ~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          315 HRRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             CHHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             CHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            57899999999999999999999999999999999999999 89999985

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=3.2e-54  Score=397.97  Aligned_cols=317  Identities=22%  Similarity=0.300  Sum_probs=270.7

Q ss_pred             cceecccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeE
Q 017901           19 RFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISG   98 (364)
Q Consensus        19 ~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G   98 (364)
                      +..+..+|.+|||+++.++++++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++.  ...+|+++|||++|
T Consensus        12 ~~~~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G   88 (342)
T 4eye_A           12 LEAQTQGPGSMKAIQAQSLSGPEGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL--KMEPPFVPGIETAG   88 (342)
T ss_dssp             ------CCCEEEEEEECSSSGGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSS--CCCSSBCCCSEEEE
T ss_pred             CcccccCCcceEEEEEecCCCCceeEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCccceeEEE
Confidence            3446678999999999999999999999 99999999999999999999999999999996532  23689999999999


Q ss_pred             EEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEE
Q 017901           99 EVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRL  178 (364)
Q Consensus        99 ~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~v  178 (364)
                      +|+++|++++ |++||||+++..    +|+|+||++++.+.++++|+++++++||+++++++|||+++.+.+++++|++|
T Consensus        89 ~V~~vG~~v~-~~vGDrV~~~~~----~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V  163 (342)
T 4eye_A           89 VVRSAPEGSG-IKPGDRVMAFNF----IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETV  163 (342)
T ss_dssp             EEEECCTTSS-CCTTCEEEEECS----SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEE
T ss_pred             EEEEECCCCC-CCCCCEEEEecC----CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEE
Confidence            9999999999 999999999864    59999999999999999999999999999999999999999888999999999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHH
Q 017901          179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETER  252 (364)
Q Consensus       179 li~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~  252 (364)
                      ||+|++|++|++++|+|+..|++|+++++++++ +.++++|++.+++++ .++.+.+.    + ++|++|||+|++ .+.
T Consensus       164 lV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~-~~~  241 (342)
T 4eye_A          164 LVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGP-AFD  241 (342)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC---CHH
T ss_pred             EEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchh-HHH
Confidence            999988999999999999999999999886654 889999999999988 66666554    2 399999999998 899


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc------C--HHHHHHHHHH
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA------D--AEGLEEIRRL  324 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~  324 (364)
                      .++++++++|+++.+|....            .     ...++...++.+++++.+++...      .  .+.+..++++
T Consensus       242 ~~~~~l~~~G~iv~~G~~~~------------~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l  304 (342)
T 4eye_A          242 DAVRTLASEGRLLVVGFAAG------------G-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKL  304 (342)
T ss_dssp             HHHHTEEEEEEEEEC---------------------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCEEEEEEccCC------------C-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHH
Confidence            99999999999999986511            0     11223335678899999987521      1  3578999999


Q ss_pred             HHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          325 SETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       325 ~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++| +++.++++|+|+++++||+.+.+++..||+|+++
T Consensus       305 ~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          305 VAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999 9999999999999999999999999999999974

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=4.4e-54  Score=396.10  Aligned_cols=313  Identities=25%  Similarity=0.354  Sum_probs=273.8

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      .+|.+|||+++.++++++.++++ +.|.|+|++|||+|||.++|||++|++.+.|..+    ..+|+++|||++|+|+++
T Consensus         4 ~~p~~mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~----~~~P~i~G~e~~G~V~~v   78 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP----CEKPYVLGREASGTVVAK   78 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC----CCSSEECCSEEEEEEEEE
T ss_pred             CCchheEEEEEecCCCCceeEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC----CCCCCccccceEEEEEEE
Confidence            47899999999999998889999 9999999999999999999999999999999653    357999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEeec-CCccccCCCCCChhh---hccccchHHHHHHHHHHhcccCCCCEEE
Q 017901          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLS-EDELTPKPVSVTHAD---ASAIPFAALTAWRALKCAARMSEGQRLL  179 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~---aa~~~~~~~ta~~~l~~~~~~~~g~~vl  179 (364)
                      |+++++|++||||+++..     |+|+||++++ .+.++++|+++++++   +|++++.++|||+++.+.+++++|++|+
T Consensus        79 G~~v~~~~~GdrV~~~~~-----G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  153 (334)
T 3qwb_A           79 GKGVTNFEVGDQVAYISN-----STFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVL  153 (334)
T ss_dssp             CTTCCSCCTTCEEEEECS-----SCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             CCCCCCCCCCCEEEEeeC-----CcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEE
Confidence            999999999999999865     9999999999 999999999999999   8888999999999998778999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHH
Q 017901          180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERL  253 (364)
Q Consensus       180 i~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~  253 (364)
                      |+||+|++|++++|+|+..|++|+++++++++ +.++++|+++++++++.++.+.+.     .++|++|||+|+. .+..
T Consensus       154 V~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~  232 (334)
T 3qwb_A          154 LFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKD-TFEI  232 (334)
T ss_dssp             ESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGG-GHHH
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChH-HHHH
Confidence            99999999999999999999999999887665 888999999999998877766654     1399999999996 9999


Q ss_pred             HHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec---cCH----HHHHHHHHHHH
Q 017901          254 GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR---ADA----EGLEEIRRLSE  326 (364)
Q Consensus       254 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~  326 (364)
                      ++++++++|+++.+|....           ...      .++...+..+++++.++...   ...    +.+++++++++
T Consensus       233 ~~~~l~~~G~iv~~G~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  295 (334)
T 3qwb_A          233 SLAALKRKGVFVSFGNASG-----------LIP------PFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVN  295 (334)
T ss_dssp             HHHHEEEEEEEEECCCTTC-----------CCC------CBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccCCEEEEEcCCCC-----------CCC------CcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence            9999999999999997511           000      01112456778888765432   122    34578999999


Q ss_pred             cCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          327 TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       327 ~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +|++++.++++|+|+++++||+.+.+++..||+|++++
T Consensus       296 ~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  333 (334)
T 3qwb_A          296 SKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIP  333 (334)
T ss_dssp             TTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECC
T ss_pred             CCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecC
Confidence            99999999999999999999999999999999999874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=3.1e-53  Score=392.12  Aligned_cols=310  Identities=24%  Similarity=0.358  Sum_probs=267.8

Q ss_pred             cceeeEEecccC---CCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           27 TSCRAVVLPRFG---GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        27 ~~~~a~~~~~~g---~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      ++|||++++++|   +++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.     ...+|+++|||++|+|+++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~~p~i~G~e~~G~V~~v   74 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMD-----VSKAPRVLGFDAIGVVESV   74 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHTTSC-----CSSSCBCCCCCEEEEEEEE
T ss_pred             CCcEEEEEEeccccCCCceeEec-cccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC-----CCCCCcCcCCccEEEEEEe
Confidence            479999999998   67889999 99999999999999999999999999999885     2367999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccC------CCCE
Q 017901          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS------EGQR  177 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~------~g~~  177 (364)
                      |+++++|++||||++.... ..+|+|+||++++.+.++++|+++++++||+++++++|||+++.+.++++      +|++
T Consensus        75 G~~v~~~~~GdrV~~~~~~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~  153 (346)
T 3fbg_A           75 GNEVTMFNQGDIVYYSGSP-DQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKT  153 (346)
T ss_dssp             CTTCCSCCTTCEEEECCCT-TSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCE
T ss_pred             CCCCCcCCCCCEEEEcCCC-CCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCE
Confidence            9999999999999986431 24699999999999999999999999999999999999999998888998      9999


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHH
Q 017901          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETER  252 (364)
Q Consensus       178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~  252 (364)
                      |+|+||+|++|++++|+|+..|++|+++++++++ +.++++|+++++++++ ++.+.++    +++|++|||+|++..+.
T Consensus       154 VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~~~  232 (346)
T 3fbg_A          154 LLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQGIELVDYVFCTFNTDMYYD  232 (346)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHHTCCCEEEEEESSCHHHHHH
T ss_pred             EEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHhCCCCccEEEECCCchHHHH
Confidence            9999889999999999999999999999886655 8899999999999875 4554443    23999999999986789


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----------CHHHHHHH
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----------DAEGLEEI  321 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  321 (364)
                      .++++|+++|+++.++....            +        ++...+..+++++.+.+...           ..+.++++
T Consensus       233 ~~~~~l~~~G~iv~~~~~~~------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (346)
T 3fbg_A          233 DMIQLVKPRGHIATIVAFEN------------D--------QDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDI  292 (346)
T ss_dssp             HHHHHEEEEEEEEESSCCSS------------C--------BCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHH
T ss_pred             HHHHHhccCCEEEEECCCCC------------C--------CccccccccceEEEEEEEecccccchhhHHHHHHHHHHH
Confidence            99999999999999875410            1        11124566778887764421           13568899


Q ss_pred             HHHHHcCCceeccceee---ccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          322 RRLSETGKLKIPVDKTF---HMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       322 ~~~~~~g~i~~~~~~~~---~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ++++++|++++.++++|   +|+++++||+.+.+++..||+|++++
T Consensus       293 ~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~  338 (346)
T 3fbg_A          293 TNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLN  338 (346)
T ss_dssp             HHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC-
T ss_pred             HHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecC
Confidence            99999999999988887   99999999999999999999999864

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=3.9e-53  Score=391.88  Aligned_cols=327  Identities=24%  Similarity=0.319  Sum_probs=264.1

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ++|||++++++++++.++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.  ...+|+++|||++|+|+++|++
T Consensus         2 m~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~   78 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKTPLVPGFECSGIVEALGDS   78 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECTT
T ss_pred             ceeEEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCC--CCCCCccccceeEEEEEEeCCC
Confidence            57999999999998889999 99999999999999999999999999999997532  2468999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCch
Q 017901          107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~  186 (364)
                      +++|++||||+++..    +|+|+||++++.+.++++|++++++++|+++++++|||+++.+.+++++|++|+|+|++|+
T Consensus        79 v~~~~~GdrV~~~~~----~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~  154 (349)
T 4a27_A           79 VKGYEIGDRVMAFVN----YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGG  154 (349)
T ss_dssp             CCSCCTTCEEEEECS----SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSH
T ss_pred             CCCCCCCCEEEEecC----CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcH
Confidence            999999999999864    5999999999999999999999999999999999999999988899999999999998899


Q ss_pred             HHHHHHHHHHHcC-CeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC
Q 017901          187 VGFAAVQFSVASG-CHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       187 ~G~~~~~~a~~~g-~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      +|++++|+|+..| ++|++++++++++.++ +|++++++ .+.++.+.++    +++|+||||+|++ .+..++++++++
T Consensus       155 vG~~a~qla~~~g~~~V~~~~~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~-~~~~~~~~l~~~  231 (349)
T 4a27_A          155 VGQAVAQLCSTVPNVTVFGTASTFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGD-NTGKGLSLLKPL  231 (349)
T ss_dssp             HHHHHHHHHTTSTTCEEEEEECGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE
T ss_pred             HHHHHHHHHHHcCCcEEEEeCCHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCch-hHHHHHHHhhcC
Confidence            9999999999985 6899988666667677 99999999 6666666654    2399999999998 679999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----------CHHHHHHHHHHHHcCCce
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----------DAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~i~  331 (364)
                      |+++.+|.............. ....+......+...++.+++++.+++...          ..+.++++++++++|+++
T Consensus       232 G~~v~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  310 (349)
T 4a27_A          232 GTYILYGSSNMVTGETKSFFS-FAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK  310 (349)
T ss_dssp             EEEEEEC--------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CEEEEECCCcccccccccccc-cccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc
Confidence            999999964110000000000 000000011223334667888888887521          157899999999999999


Q ss_pred             eccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          332 IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       332 ~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +.++++|+|+|+++||+.+.+++..||+|++++
T Consensus       311 ~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~  343 (349)
T 4a27_A          311 PVVDSLWALEEVKEAMQRIHDRGNIGKLILDVE  343 (349)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCSSEEEEETT
T ss_pred             ccccceECHHHHHHHHHHHHhCCCCceEEEecC
Confidence            999999999999999999999999999999874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=9.7e-53  Score=388.06  Aligned_cols=310  Identities=25%  Similarity=0.336  Sum_probs=269.1

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +|||+++++++++  ++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.  ...+|+++|||++|+|+++|+++
T Consensus         2 ~MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~G~E~~G~V~~vG~~v   76 (340)
T 3s2e_A            2 MMKAAVVRAFGAP--LTID-EVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPV--KPTLPFIPGHEGVGYVSAVGSGV   76 (340)
T ss_dssp             EEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECSSC
T ss_pred             ceEEEEEecCCCC--CEEE-EccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCC--CCCCCcccCCcceEEEEEECCCC
Confidence            5999999988766  8999 99999999999999999999999999999996532  23689999999999999999999


Q ss_pred             CCCCCCCEEEEec------------------------CCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHH
Q 017901          108 RSLTVGQEVFGAL------------------------HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW  163 (364)
Q Consensus       108 ~~~~~Gd~V~~~~------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  163 (364)
                      ++|++||||+...                        .....+|+|+||+++|.+.++++|+++++++||++++++.|||
T Consensus        77 ~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  156 (340)
T 3s2e_A           77 SRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVY  156 (340)
T ss_dssp             CSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHH
T ss_pred             CcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHH
Confidence            9999999995321                        0112579999999999999999999999999999999999999


Q ss_pred             HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---CCcc
Q 017901          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---GKFD  239 (364)
Q Consensus       164 ~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---g~~D  239 (364)
                      +++ +..++++|++|||+| +|++|++++|+|+.+|++|+++.+++++ +.++++|+++++|+++.++.+.+.   |++|
T Consensus       157 ~~l-~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d  234 (340)
T 3s2e_A          157 KGL-KVTDTRPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAH  234 (340)
T ss_dssp             HHH-HTTTCCTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEE
T ss_pred             HHH-HHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCC
Confidence            999 678999999999999 5999999999999999999999876665 889999999999998877766654   3499


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE  319 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (364)
                      ++||++|+...+..++++++++|+++.+|....            +.      ..+...++.+++++.+++.. +.++++
T Consensus       235 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~i~g~~~~-~~~~~~  295 (340)
T 3s2e_A          235 GVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------------DF------GTPIFDVVLKGITIRGSIVG-TRSDLQ  295 (340)
T ss_dssp             EEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------------EE------EEEHHHHHHTTCEEEECCSC-CHHHHH
T ss_pred             EEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------------CC------CCCHHHHHhCCeEEEEEecC-CHHHHH
Confidence            999999988799999999999999999987511            11      01112456788999988765 688999


Q ss_pred             HHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          320 EIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       320 ~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ++++++++|++++. ++.|+|+++++||+.+.+++..||+|++++
T Consensus       296 ~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~  339 (340)
T 3s2e_A          296 ESLDFAAHGDVKAT-VSTAKLDDVNDVFGRLREGKVEGRVVLDFS  339 (340)
T ss_dssp             HHHHHHHTTSCCCC-EEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHHHhCCCCce-EEEEeHHHHHHHHHHHHcCCCceEEEEecC
Confidence            99999999999986 457899999999999999999999999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.4e-52  Score=386.88  Aligned_cols=313  Identities=26%  Similarity=0.334  Sum_probs=266.4

Q ss_pred             cccceeeEEecccCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           25 VTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      |+++|||+++.++|.+ +.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++.  ...+|+++|||++|+|+++
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~v   77 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH--RIPLPNIPGYEGVGIVENV   77 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEE-EEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT--TSCSSBCCCSCCEEEEEEE
T ss_pred             CCcccEEEEEecCCCchheEEEE-ecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC--CCCCCCcCCcceEEEEEEe
Confidence            4568999999999988 779999 99999999999999999999999999999997542  2468999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcC
Q 017901          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG  183 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~  183 (364)
                      |+++++|++||||+.+..    +|+|+||+++|.+.++++|+++++++||++++.++|||+++.+.+++++|++|+|+|+
T Consensus        78 G~~v~~~~vGdrV~~~~~----~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga  153 (340)
T 3gms_A           78 GAFVSRELIGKRVLPLRG----EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNAC  153 (340)
T ss_dssp             CTTSCGGGTTCEEEECSS----SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCCCCCCEEEecCC----CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCC
Confidence            999999999999998743    6999999999999999999999999999999999999999988899999999999998


Q ss_pred             CchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhh
Q 017901          184 GGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNF  257 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~  257 (364)
                      +|++|++++|+|+..|++|++++++++ .+.++++|+++++|+++.++.+.+.     .++|++|||+|++ ....++++
T Consensus       154 ~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~  232 (340)
T 3gms_A          154 GSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGP-DGNELAFS  232 (340)
T ss_dssp             TSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHH-HHHHHHHT
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHH
Confidence            889999999999999999999987655 4889999999999998877766654     1399999999998 66677799


Q ss_pred             ccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec---------cCHHHHHHHHHHHHcC
Q 017901          258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR---------ADAEGLEEIRRLSETG  328 (364)
Q Consensus       258 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g  328 (364)
                      |+++|+++.+|....           .+.. ...      .....++.+..++..         ...+.++++++++++|
T Consensus       233 l~~~G~iv~~G~~~~-----------~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  294 (340)
T 3gms_A          233 LRPNGHFLTIGLLSG-----------IQVN-WAE------IVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENE  294 (340)
T ss_dssp             EEEEEEEEECCCTTS-----------CCCC-HHH------HHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred             hcCCCEEEEEeecCC-----------CCCC-HHH------hhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC
Confidence            999999999997511           1111 001      011234444444321         1246789999999999


Q ss_pred             Ccee-ccceeeccccHHHHHHHHhcCCC-CCeEEEEc
Q 017901          329 KLKI-PVDKTFHMTQVREAHEAKDKRLI-PGKVVLEF  363 (364)
Q Consensus       329 ~i~~-~~~~~~~l~~~~eA~~~~~~~~~-~gkvvi~~  363 (364)
                      ++++ .++++|+|+|+++||+.+.+++. .||+|+++
T Consensus       295 ~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          295 QLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             SSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             CCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence            9997 58999999999999999999985 59999986

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=5.6e-53  Score=387.17  Aligned_cols=311  Identities=26%  Similarity=0.353  Sum_probs=266.7

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +|||++++++|+++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++.   ..+|+++|||++|+|+++|+++
T Consensus         1 MMkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~vG~~v   76 (325)
T 3jyn_A            1 MAKRIQFSTVGGPEVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEGAGVVEAVGDEV   76 (325)
T ss_dssp             CEEEEEBSSCSSGGGCEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCCCEEEEEEEECTTC
T ss_pred             CcEEEEEecCCCcceeEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCCCCCceeEEEEEEECCCC
Confidence            3999999999999999999 99999999999999999999999999999996542   3679999999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      ++|++||||+....   .+|+|+||++++.+.++++|+++++++||++++.++|||+++.+.+++++|++|+|+|++|++
T Consensus        77 ~~~~~GdrV~~~~~---~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~i  153 (325)
T 3jyn_A           77 TRFKVGDRVAYGTG---PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGV  153 (325)
T ss_dssp             CSCCTTCEEEESSS---SSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHH
T ss_pred             CCCCCCCEEEEecC---CCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHH
Confidence            99999999998763   359999999999999999999999999999999999999999888899999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      |++++|+|+..|++|+++++++++ +.++++|+++++|+++.++.+.+.     .++|++|||+|+. .+..++++++++
T Consensus       154 G~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~  232 (325)
T 3jyn_A          154 GSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQD-TWLTSLDSVAPR  232 (325)
T ss_dssp             HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGG-GHHHHHTTEEEE
T ss_pred             HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhcCC
Confidence            999999999999999999877665 888999999999998877766654     1399999999996 999999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcc-ceeEEEEEe---ccC----HHHHHHHHHHHHcCCceec
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY-GIDYSYIYM---RAD----AEGLEEIRRLSETGKLKIP  333 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~----~~~~~~~~~~~~~g~i~~~  333 (364)
                      |+++.+|....            +...     ++...+..+ ++.+.+...   ..+    .+.++++++++++|++++.
T Consensus       233 G~iv~~g~~~~------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  295 (325)
T 3jyn_A          233 GLVVSFGNASG------------PVSG-----VNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD  295 (325)
T ss_dssp             EEEEECCCTTC------------CCCS-----CCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CEEEEEecCCC------------CCCC-----CCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCc
Confidence            99999997521            1000     000112223 344433221   111    3345689999999999999


Q ss_pred             cceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          334 VDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++|+|+|+++||+.+.+++..||+|+.+
T Consensus       296 i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          296 GIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999999999999999999999999974

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.7e-52  Score=386.52  Aligned_cols=312  Identities=33%  Similarity=0.505  Sum_probs=265.9

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      +|++|||+++.+++++  ++++ +.|.|+|++|||+|||.++|||++|++.+.|..+. ....+|+++|||++|+|+++|
T Consensus         4 ~~~~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~P~v~G~E~~G~V~~vG   79 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGP--FVLR-KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPH-AQQPLPAILGMDLAGTVVAVG   79 (343)
T ss_dssp             --CEEEEEEECSTTCC--EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGG-GCCCSSBCCCCEEEEEEEEEC
T ss_pred             CchhheEEEEecCCCc--eEEE-eccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCC-CCCCCCcccCcceEEEEEEEC
Confidence            4678999999988877  8999 99999999999999999999999999999986432 224689999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCC-CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcC
Q 017901          105 ASVRSLTVGQEVFGALHPT-AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG  183 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~  183 (364)
                      +++++|++||||+++.... ..+|+|+||++++.+.++++|+++++++||+++++++|||+++.+.+++++|++|||+||
T Consensus        80 ~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  159 (343)
T 3gaz_A           80 PEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGG  159 (343)
T ss_dssp             TTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETT
T ss_pred             CCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            9999999999999886422 246999999999999999999999999999999999999999978899999999999999


Q ss_pred             CchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhc
Q 017901          184 GGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFL  258 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l  258 (364)
                      +|++|++++|+|+..|++|+++.+.++++.++++|++. ++ +..++.+.+.     .++|++|||+|++ .+..++++|
T Consensus       160 ~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l  236 (343)
T 3gaz_A          160 GGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGP-VLDASFSAV  236 (343)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTH-HHHHHHHHE
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcH-HHHHHHHHH
Confidence            99999999999999999999995455558899999998 77 5555555443     1399999999986 999999999


Q ss_pred             cCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----------CHHHHHHHHHHHHcC
Q 017901          259 KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----------DAEGLEEIRRLSETG  328 (364)
Q Consensus       259 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g  328 (364)
                      +++|+++.+|...           ..+.          ..+..+++++.+++...          ..+.++++++++++|
T Consensus       237 ~~~G~iv~~g~~~-----------~~~~----------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  295 (343)
T 3gaz_A          237 KRFGHVVSCLGWG-----------THKL----------APLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTG  295 (343)
T ss_dssp             EEEEEEEESCCCS-----------CCCC----------HHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTT
T ss_pred             hcCCeEEEEcccC-----------cccc----------chhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCC
Confidence            9999999998751           0011          13456788888865421          136789999999999


Q ss_pred             Cceeccc-eeeccccHHHHHHHHhcCCC----CCeEEEEcC
Q 017901          329 KLKIPVD-KTFHMTQVREAHEAKDKRLI----PGKVVLEFD  364 (364)
Q Consensus       329 ~i~~~~~-~~~~l~~~~eA~~~~~~~~~----~gkvvi~~~  364 (364)
                      ++++.++ ++|+|+|+++||+.+.+++.    .||+|+++.
T Consensus       296 ~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          296 KLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE  336 (343)
T ss_dssp             CCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred             CcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence            9999988 79999999999999998876    579998863

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.6e-52  Score=387.66  Aligned_cols=309  Identities=16%  Similarity=0.187  Sum_probs=261.9

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      |+++|||+++.+++.+  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+.   ..+|+++|||++|+|+++|
T Consensus         1 M~m~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~V~~vG   74 (348)
T 3two_A            1 MRVQSKGFAIFSKDEH--FKPH-DFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE---GIYPMIPGHEIAGIIKEVG   74 (348)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC---CCSSBCCCCCEEEEEEEEC
T ss_pred             CceEEEEEEEccCCCC--CeEE-EeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC---CCCCeecCcceeEEEEEEC
Confidence            3467999999987654  8999 99999999999999999999999999999986432   4679999999999999999


Q ss_pred             CCCCCCCCCCEEEEecC-----------------------CCC----------CCCcceeEEeecCCccccCCCCCChhh
Q 017901          105 ASVRSLTVGQEVFGALH-----------------------PTA----------VRGTYADYAVLSEDELTPKPVSVTHAD  151 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~-----------------------~~~----------~~g~~~~~~~~~~~~~~~ip~~~~~~~  151 (364)
                      +++++|++||||+....                       ...          ..|+|+||+++|.+.++++|+++++++
T Consensus        75 ~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~  154 (348)
T 3two_A           75 KGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEK  154 (348)
T ss_dssp             TTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHH
T ss_pred             CCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHH
Confidence            99999999999986321                       001          129999999999999999999999999


Q ss_pred             hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhH
Q 017901          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDI  230 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~  230 (364)
                      ||++++++.|||+++. ..++++|++|||+| +|++|++++|+|+.+|++|++++++++ +++++++|+++++ .+...+
T Consensus       155 aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~  231 (348)
T 3two_A          155 VAPLLCAGITTYSPLK-FSKVTKGTKVGVAG-FGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDPKQC  231 (348)
T ss_dssp             HGGGGTHHHHHHHHHH-HTTCCTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSGGGC
T ss_pred             hhhhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCHHHH
Confidence            9999999999999994 57999999999999 599999999999999999999976555 5889999999988 332222


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhh-ccceeEEEE
Q 017901          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY-SYGIDYSYI  309 (364)
Q Consensus       231 ~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  309 (364)
                      .+   + +|+||||+|++..+..++++++++|+++.+|....           .+...     ++...+. .+++++.++
T Consensus       232 ~~---~-~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----------~~~~~-----~~~~~~~~~~~~~i~g~  291 (348)
T 3two_A          232 KE---E-LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPV-----------EVAPV-----LSVFDFIHLGNRKVYGS  291 (348)
T ss_dssp             CS---C-EEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCG-----------GGCCE-----EEHHHHHHTCSCEEEEC
T ss_pred             hc---C-CCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCC-----------CCccc-----CCHHHHHhhCCeEEEEE
Confidence            11   5 99999999998789999999999999999997620           01100     1111344 789999998


Q ss_pred             EeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          310 YMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +.. +.+++.++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|++++
T Consensus       292 ~~~-~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          292 LIG-GIKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             CSC-CHHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             ecC-CHHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence            765 678899999999999999865 79999999999999999999999999874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-52  Score=388.88  Aligned_cols=316  Identities=21%  Similarity=0.286  Sum_probs=260.9

Q ss_pred             ceecccccceeeEEecccCCCceEEEcccccCCC-CCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeE
Q 017901           20 FVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISG   98 (364)
Q Consensus        20 ~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G   98 (364)
                      +++...+++|||+++.+++++  ++++ +.|.|+ |++|||+|||.++|||++|++.+.|..+......+|+++|||++|
T Consensus         7 ~~~~~~~~~mka~~~~~~g~~--l~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G   83 (359)
T 1h2b_A            7 FSQSLGVERLKAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVG   83 (359)
T ss_dssp             ----------CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEE
T ss_pred             hhhcCChhhceEEEEecCCCC--cEEE-EccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceE
Confidence            344455788999999987754  8888 999999 999999999999999999999999864311123679999999999


Q ss_pred             EEEeecCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhc--
Q 017901           99 EVAAVGASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADAS--  153 (364)
Q Consensus        99 ~V~~vG~~~~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa--  153 (364)
                      +|+++|+++++|++||||+.....                       ...+|+|+||+++|.+.++++|+++++++||  
T Consensus        84 ~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~  163 (359)
T 1h2b_A           84 YIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEM  163 (359)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHT
T ss_pred             EEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhc
Confidence            999999999999999999875421                       0146999999999999999999999999999  


Q ss_pred             -cccchHHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCceeeeCCChh
Q 017901          154 -AIPFAALTAWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD  229 (364)
Q Consensus       154 -~~~~~~~ta~~~l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~  229 (364)
                       .++++++|||+++.+. +++++|++|+|+|+ |++|++++|+|+.+ |++|+++++++++ ++++++|+++++|+++. 
T Consensus       164 ~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-  241 (359)
T 1h2b_A          164 APLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-  241 (359)
T ss_dssp             GGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-
T ss_pred             cchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-
Confidence             7888999999999655 89999999999996 99999999999999 9999999877654 88999999999998876 


Q ss_pred             HHHHhc----C-CccEEEECCCCch--hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcc
Q 017901          230 IELAIK----G-KFDAVLDTIGAPE--TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY  302 (364)
Q Consensus       230 ~~~~i~----g-~~D~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (364)
                      +.+.++    + ++|++|||+|++.  .+..++++  ++|+++.+|....           ...        +...++.+
T Consensus       242 ~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-----------~~~--------~~~~~~~~  300 (359)
T 1h2b_A          242 PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-----------LRF--------PTIRVISS  300 (359)
T ss_dssp             HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-----------CCC--------CHHHHHHT
T ss_pred             HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-----------CCC--------CHHHHHhC
Confidence            444432    2 4999999999986  78888888  9999999987511           011        11135668


Q ss_pred             ceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          303 GIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++.+++.. +.++++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus       301 ~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          301 EVSFEGSLVG-NYVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             TCEEEECCSC-CHHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CcEEEEecCC-CHHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            8899887754 578899999999999999888 9999999999999999998889999975

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.2e-51  Score=385.60  Aligned_cols=333  Identities=33%  Similarity=0.543  Sum_probs=269.1

Q ss_pred             cccceeeEEecccCCCceEEE-cccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccc----------c--CCCCCc
Q 017901           25 VTTSCRAVVLPRFGGPEVLEV-RPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSI----------F--EPLLPL   90 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~-~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~----------~--~~~~p~   90 (364)
                      ++++|||+++.++|+++.+++ + +.|.|.| ++|||+|||.++|||++|++.+.|..+..          .  ...+|+
T Consensus        18 ~~~~mka~~~~~~g~~~~l~~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           18 LYFQSMAWVIDKYGKNEVLRFTQ-NMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             CCCCEEEEEBSSCCSGGGCEEEE-EECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             cCccceeEEeccCCCccceEEec-cccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            677899999999988888999 8 9999985 99999999999999999999998853211          1  123799


Q ss_pred             ccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhc
Q 017901           91 ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA  170 (364)
Q Consensus        91 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~  170 (364)
                      ++|||++|+|+++|+++++|++||||++.... ..+|+|+||++++.+.++++|+++++++||+++++++|||+++.+.+
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~-~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~  175 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP-WKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVG  175 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECCT-TSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecCC-CCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999987532 13599999999999999999999999999999999999999997678


Q ss_pred             c----cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc--CCccEEEEC
Q 017901          171 R----MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDT  244 (364)
Q Consensus       171 ~----~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~  244 (364)
                      +    +++|++|+|+||+|++|++++|+|+..|++|++++++++++.++++|++.++|+++.++.+.+.  +++|++|||
T Consensus       176 ~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~  255 (375)
T 2vn8_A          176 GLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDN  255 (375)
T ss_dssp             CCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEES
T ss_pred             ccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEEC
Confidence            8    8999999999999999999999999999999999876666888999999999998877776664  239999999


Q ss_pred             CCCc-hhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhH-HHHHHhhhhh-h-ccceeEEEEEeccCHHHHHH
Q 017901          245 IGAP-ETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATT-VLLKKRMQTW-Y-SYGIDYSYIYMRADAEGLEE  320 (364)
Q Consensus       245 ~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~  320 (364)
                      +|++ ..+..++++++++|+++.+|..........+    .+.... ....+....+ . .++..+.+.+.....+.+++
T Consensus       256 ~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  331 (375)
T 2vn8_A          256 VGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLG----IADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDD  331 (375)
T ss_dssp             SCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHH
T ss_pred             CCChhhhhHHHHHhhcCCcEEEEeCCCccccccccc----ccchhheeehhhccccccccccCcceEEEEeCCCHHHHHH
Confidence            9997 4568999999999999999865110000000    000000 0000000000 0 03444444333335678899


Q ss_pred             HHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++++++|++++.++++|+|+|+++||+.+.+++..||+|+++
T Consensus       332 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          332 IAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            9999999999999999999999999999999998889999986

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=3.8e-52  Score=385.51  Aligned_cols=307  Identities=21%  Similarity=0.266  Sum_probs=265.8

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+.+ +..++++ +.|.|+|+||||||||.|+|||++|+++++|.++    ..+|+++|||++|+|+++|++++
T Consensus         1 MKA~v~~~~~-~~~~~l~-e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~----~~~p~i~GhE~aG~V~~vG~~V~   74 (348)
T 4eez_A            1 MKAAVVRHNP-DGYADLV-EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG----NKAGTVLGHEGIGIVKEIGADVS   74 (348)
T ss_dssp             CEEEEECSSC-CSSEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC----CCTTCBCCSEEEEEEEEECTTCC
T ss_pred             CeEEEEEcCC-CCcEEEE-EeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC----CCCCcccceeEEEEEEEECceee
Confidence            8999987432 3458899 9999999999999999999999999999999653    36899999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      +|++||||+....                        ....+|+|+||++++.+.++++|+++++++||+++++++|||+
T Consensus        75 ~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  154 (348)
T 4eez_A           75 SLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYK  154 (348)
T ss_dssp             SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             ecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEe
Confidence            9999999986432                        1235799999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc------C
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK------G  236 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~------g  236 (364)
                      ++ +.+.+++|++|+|+| +|++|.+++|+|+.+ |++|+++++++++ ++++++|+++++|+++.++.+.++      |
T Consensus       155 ~l-~~~~~~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g  232 (348)
T 4eez_A          155 AI-KVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLG  232 (348)
T ss_dssp             HH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSC
T ss_pred             ee-cccCCCCCCEEEEEc-CCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCC
Confidence            98 678899999999999 689999999999876 6799999887765 889999999999999888777765      4


Q ss_pred             CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHH
Q 017901          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE  316 (364)
Q Consensus       237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (364)
                       +|.++|++++...+..++++++++|+++.+|....            ..      .++...++.+++++.+++.. ++.
T Consensus       233 -~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~~~~~~~i~gs~~~-~~~  292 (348)
T 4eez_A          233 -VQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------------EM------TLSVPTVVFDGVEVAGSLVG-TRL  292 (348)
T ss_dssp             -EEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------------EE------EECHHHHHHSCCEEEECCSC-CHH
T ss_pred             -ceEEEEeccCcchhheeheeecCCceEEEEeccCC------------CC------ccCHHHHHhCCeEEEEEecC-CHH
Confidence             89999999998889999999999999999986511            11      01112466789999998765 688


Q ss_pred             HHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          317 GLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       317 ~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+||+|+
T Consensus       293 ~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~s  339 (348)
T 4eez_A          293 DLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFT  339 (348)
T ss_dssp             HHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEcc
Confidence            999999999999998754 78999999999999999999999999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=2e-52  Score=388.70  Aligned_cols=312  Identities=24%  Similarity=0.346  Sum_probs=269.2

Q ss_pred             cccceeeEEeccc---CCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEE
Q 017901           25 VTTSCRAVVLPRF---GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (364)
Q Consensus        25 ~~~~~~a~~~~~~---g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (364)
                      +.++|||+++.++   ++++.++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.   ..+|.++|||++|+|+
T Consensus        19 ~m~~MkA~~~~~~~~~~~~~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~   94 (363)
T 4dvj_A           19 YFQSMKAVGYNKPAPITDDASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD---GTDWKVIGYDAAGIVS   94 (363)
T ss_dssp             CCCEEEEEEBSSCCCTTSTTSSEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC-----CCSBCCCCCEEEEEE
T ss_pred             hhheeEEEEEeccCCCCCCceEEEe-ecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC---CCCCCcccceeEEEEE
Confidence            4468999999988   667889999 99999999999999999999999999999997532   3679999999999999


Q ss_pred             eecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccC-----CCC
Q 017901          102 AVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS-----EGQ  176 (364)
Q Consensus       102 ~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~-----~g~  176 (364)
                      ++|+++++|++||||++.... ..+|+|+||++++.+.++++|+++++++||+++++++|||+++.+.++++     +|+
T Consensus        95 ~vG~~v~~~~vGdrV~~~~~~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~  173 (363)
T 4dvj_A           95 AVGPDVTLFRPGDEVFYAGSI-IRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAP  173 (363)
T ss_dssp             EECTTCCSCCTTCEEEECCCT-TSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEE
T ss_pred             EeCCCCCCCCCCCEEEEccCC-CCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCC
Confidence            999999999999999986421 24699999999999999999999999999999999999999998888988     899


Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchh
Q 017901          177 RLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~  250 (364)
                      +|+|+||+|++|++++|+|+. .|++|+++++++++ +.++++|+++++++++ ++.+.++    +++|+||||+|++..
T Consensus       174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~~~~g~Dvvid~~g~~~~  252 (363)
T 4dvj_A          174 AILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAALGLGAPAFVFSTTHTDKH  252 (363)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTTCSCCEEEEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHhcCCCceEEEECCCchhh
Confidence            999999999999999999998 58999999887655 8899999999999875 5555554    249999999998768


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-------C----HHHHH
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-------D----AEGLE  319 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~  319 (364)
                      +..++++++++|+++.+|...             +        ++...+..+++++.++....       .    .+.++
T Consensus       253 ~~~~~~~l~~~G~iv~~g~~~-------------~--------~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~  311 (363)
T 4dvj_A          253 AAEIADLIAPQGRFCLIDDPS-------------A--------FDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLN  311 (363)
T ss_dssp             HHHHHHHSCTTCEEEECSCCS-------------S--------CCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHH
T ss_pred             HHHHHHHhcCCCEEEEECCCC-------------c--------cchHHHhhccceEEEEEeeccccccCcchhhHHHHHH
Confidence            899999999999999997531             1        11124567788887755421       1    35789


Q ss_pred             HHHHHHHcCCceeccceee---ccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          320 EIRRLSETGKLKIPVDKTF---HMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       320 ~~~~~~~~g~i~~~~~~~~---~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++++++|++++.++++|   +|+++++||+.+.+++..||+|+++
T Consensus       312 ~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          312 DVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             HHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence            9999999999999887766   9999999999999999999999986

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=3.6e-52  Score=389.47  Aligned_cols=316  Identities=19%  Similarity=0.260  Sum_probs=266.5

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      .+|.+|||+++.+++.+  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+   ...+|+++|||++|+|+++
T Consensus         4 ~~~~tmkA~v~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~v   77 (378)
T 3uko_A            4 GQVITCKAAVAYEPNKP--LVIE-DVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESV   77 (378)
T ss_dssp             TSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEE
T ss_pred             ccceeeEEEEEecCCCc--cEEE-EecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC---CCCCCccCCccceEEEEEe
Confidence            47889999999988776  8899 9999999999999999999999999999999743   3468999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCC---------------------------------------------CCCCcceeEEeecCC
Q 017901          104 GASVRSLTVGQEVFGALHPT---------------------------------------------AVRGTYADYAVLSED  138 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~~---------------------------------------------~~~g~~~~~~~~~~~  138 (364)
                      |+++++|++||||+......                                             ...|+|+||++++.+
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  157 (378)
T 3uko_A           78 GEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDV  157 (378)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             CCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechh
Confidence            99999999999998764310                                             012699999999999


Q ss_pred             ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHH
Q 017901          139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA  216 (364)
Q Consensus       139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~  216 (364)
                      .++++|+++++++||.+++++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++.++++ ++++++
T Consensus       158 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~  236 (378)
T 3uko_A          158 SVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK  236 (378)
T ss_dssp             GEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred             heEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence            999999999999999999999999999888899999999999995 9999999999999999 8999986555 488999


Q ss_pred             cCCceeeeCC--ChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhH
Q 017901          217 AGAEQAVDYS--SKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATT  289 (364)
Q Consensus       217 ~g~~~v~~~~--~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (364)
                      +|+++++++.  +.++.+.++    +++|+||||+|++..+..++++++++ |+++.+|....          +...   
T Consensus       237 lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~----------~~~~---  303 (378)
T 3uko_A          237 FGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS----------GQEI---  303 (378)
T ss_dssp             TTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----------TCCE---
T ss_pred             cCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCC----------CCcc---
Confidence            9999999987  456666554    34999999999976899999999996 99999997511          0011   


Q ss_pred             HHHHHhhhhhhccceeEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          290 VLLKKRMQTWYSYGIDYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                         .+....++ +++++.+++..  ...+++.++++++.+|++++  +++++|+|+|+++||+.+.+++. .|+|++++
T Consensus       304 ---~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~-~Kvvi~~~  377 (378)
T 3uko_A          304 ---STRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTC-LRCVLDTS  377 (378)
T ss_dssp             ---EECTHHHH-TTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTC-SEEEEETT
T ss_pred             ---ccCHHHHh-cCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCc-eEEEEecC
Confidence               00011122 37788877653  23678999999999999884  58999999999999999998887 49999875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2e-52  Score=387.77  Aligned_cols=322  Identities=27%  Similarity=0.321  Sum_probs=267.2

Q ss_pred             ccceecccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCccccccee
Q 017901           18 LRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDIS   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~   97 (364)
                      .+.....++++|||+++.++|.++.++++ +.|.|+|+++||+|||.++|||++|++.+.|.++.  ...+|+++|||++
T Consensus        12 ~~~~~~~~~~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v~G~E~~   88 (354)
T 2j8z_A           12 DLGTENLYFQSMLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEAS   88 (354)
T ss_dssp             ---------CEEEEEEESSCSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CTTSCSSSCSEEE
T ss_pred             cccccccchhheeEEEEccCCCccceEEe-ecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC--CCCCCcccceeeE
Confidence            34445568899999999999888889999 99999999999999999999999999999986532  2357899999999


Q ss_pred             EEEEeecCCC-CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCC
Q 017901           98 GEVAAVGASV-RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ  176 (364)
Q Consensus        98 G~V~~vG~~~-~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~  176 (364)
                      |+|+++|+++ ++|++||||+++..    +|+|+||++++.+.++++|+++++++||+++++++|||+++.+.+++++|+
T Consensus        89 G~V~~vG~~v~~~~~vGdrV~~~~~----~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~  164 (354)
T 2j8z_A           89 GHVAELGPGCQGHWKIGDTAMALLP----GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGD  164 (354)
T ss_dssp             EEEEEECSCC--CCCTTCEEEEECS----SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTC
T ss_pred             EEEEEECCCcCCCCCCCCEEEEecC----CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCC
Confidence            9999999999 99999999998754    599999999999999999999999999999999999999997788999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchh
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPET  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~  250 (364)
                      +|+|+||+|++|++++|+++..|++|+++++++++ +.++++|++.++|+++.++.+.+.     +++|++|||+|++ .
T Consensus       165 ~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~-~  243 (354)
T 2j8z_A          165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGS-Y  243 (354)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGG-G
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCch-H
Confidence            99999999999999999999999999999877665 778999999999988776655553     2399999999998 8


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh-hhhhccceeEEEEEeccC-HH--------HHHH
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM-QTWYSYGIDYSYIYMRAD-AE--------GLEE  320 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~--------~~~~  320 (364)
                      +..++++++++|+++.+|....           ...      .++. ..++.+++++.+++.... ..        ..++
T Consensus       244 ~~~~~~~l~~~G~iv~~G~~~~-----------~~~------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~  306 (354)
T 2j8z_A          244 WEKNVNCLALDGRWVLYGLMGG-----------GDI------NGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQ  306 (354)
T ss_dssp             HHHHHHHEEEEEEEEECCCTTC-----------SCC------CSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCCCEEEEEeccCC-----------Ccc------CCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHH
Confidence            9999999999999999986511           000      0111 135667888888765321 11        1245


Q ss_pred             HHHHHHcC---CceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          321 IRRLSETG---KLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       321 ~~~~~~~g---~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +++++++|   ++++.++++|+|+++++||+.+.+++..||+|++++
T Consensus       307 ~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          307 ILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             TGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            78888999   898899999999999999999999888899999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=3.7e-52  Score=386.93  Aligned_cols=313  Identities=18%  Similarity=0.234  Sum_probs=268.3

Q ss_pred             ccccceeeEEecccCCCceEEEccc--ccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEE
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPN--VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~--~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (364)
                      ++|++|||+++.+++++  ++++ +  .|.|+|+++||+|||.++|||++|++.+.|..+   ...+|+++|||++|+|+
T Consensus         2 ~~p~~mka~~~~~~~~~--l~~~-~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~GhE~~G~V~   75 (360)
T 1piw_A            2 SYPEKFEGIAIQSHEDW--KNPK-KTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVV   75 (360)
T ss_dssp             CTTTCEEEEEECCSSST--TSCE-EEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEE
T ss_pred             CCChheEEEEEecCCCC--eeEE-eccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCC---CCCCCcccCcCceEEEE
Confidence            36788999999987754  6777 8  899999999999999999999999999998643   23579999999999999


Q ss_pred             eecCCCC-CCCCCCEEEEec-------------------------C------CCCCCCcceeEEeecCCccccCCCCCCh
Q 017901          102 AVGASVR-SLTVGQEVFGAL-------------------------H------PTAVRGTYADYAVLSEDELTPKPVSVTH  149 (364)
Q Consensus       102 ~vG~~~~-~~~~Gd~V~~~~-------------------------~------~~~~~g~~~~~~~~~~~~~~~ip~~~~~  149 (364)
                      ++|++++ +|++||||+...                         .      ....+|+|+||++++.+.++++|+++++
T Consensus        76 ~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~  155 (360)
T 1piw_A           76 KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPS  155 (360)
T ss_dssp             EECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCH
T ss_pred             EeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCH
Confidence            9999999 999999995421                         0      1124699999999999999999999999


Q ss_pred             hhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCCh
Q 017901          150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSK  228 (364)
Q Consensus       150 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~  228 (364)
                      ++||++++++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|++|++++++++ ++.++++|+++++++++.
T Consensus       156 ~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~  233 (360)
T 1piw_A          156 HLAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEE  233 (360)
T ss_dssp             HHHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGT
T ss_pred             HHhhhhhhhHHHHHHHHH-HcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCc
Confidence            999999999999999995 489999999999997 99999999999999999999986554 588899999999998877


Q ss_pred             -hHHHHhcCCccEEEECCCC--chhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcccee
Q 017901          229 -DIELAIKGKFDAVLDTIGA--PETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGID  305 (364)
Q Consensus       229 -~~~~~i~g~~D~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (364)
                       ++.+.+.+++|++|||+|+  +..+..++++++++|+++.+|....           .+       .++...++.++++
T Consensus       234 ~~~~~~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-----------~~-------~~~~~~~~~~~~~  295 (360)
T 1piw_A          234 GDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-----------HE-------MLSLKPYGLKAVS  295 (360)
T ss_dssp             SCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-----------SC-------CEEECGGGCBSCE
T ss_pred             hHHHHHhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-----------cc-------ccCHHHHHhCCeE
Confidence             7777776349999999998  5588999999999999999987510           00       0111245678899


Q ss_pred             EEEEEeccCHHHHHHHHHHHHcCCceeccceeecccc--HHHHHHHHhcCCCCCeEEEEcC
Q 017901          306 YSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQ--VREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~--~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +.+++.. +.++++++++++++|++++.+ ++|+|+|  +++||+.+.+++..||+|++++
T Consensus       296 i~g~~~~-~~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          296 ISYSALG-SIKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  354 (360)
T ss_dssp             EEECCCC-CHHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             EEEEecC-CHHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecC
Confidence            9887754 578899999999999999887 8999999  9999999999988899999864

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=3.2e-52  Score=386.89  Aligned_cols=316  Identities=25%  Similarity=0.344  Sum_probs=264.2

Q ss_pred             ccccceeeEEecccCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEe
Q 017901           24 LVTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (364)
                      +||.+||++++.++|.+ +.++++ +.|.|+|+++||+|||.++|||++|++.+.|.++.  ...+|+++|||++|+|++
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~   98 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL--LPELPAVGGNEGVAQVVA   98 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSEECCSCCEEEEEE
T ss_pred             hCchhhEEEEEecCCCccceEEEe-eccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC--CCCCCccccceEEEEEEE
Confidence            58889999999988876 348899 99999999999999999999999999999986432  225799999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEc
Q 017901          103 VGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g  182 (364)
                      +|+++++|++||||++...   .+|+|+||++++.+.++++|+++++++||+++++++|||+++.+.+++++|++|||+|
T Consensus        99 vG~~v~~~~vGdrV~~~~~---~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G  175 (357)
T 1zsy_A           99 VGSNVTGLKPGDWVIPANA---GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNA  175 (357)
T ss_dssp             ECTTCCSCCTTCEEEESSS---CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESS
T ss_pred             eCCCCCCCCCCCEEEEcCC---CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeC
Confidence            9999999999999998753   2599999999999999999999999999999999999999997778999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCeEEEeeCCcc-----HHHHHHcCCceeeeCCCh---hHHHHhcC--CccEEEECCCCchhHH
Q 017901          183 GGGAVGFAAVQFSVASGCHVSATCGSKS-----IDRVLAAGAEQAVDYSSK---DIELAIKG--KFDAVLDTIGAPETER  252 (364)
Q Consensus       183 ~~g~~G~~~~~~a~~~g~~vi~~~~~~~-----~~~~~~~g~~~v~~~~~~---~~~~~i~g--~~D~vid~~g~~~~~~  252 (364)
                      ++|++|++++|+|+.+|+++++++++++     ++.++++|+++++++++.   .+.+...+  ++|+||||+|++ ...
T Consensus       176 a~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~-~~~  254 (357)
T 1zsy_A          176 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGK-SST  254 (357)
T ss_dssp             TTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHH-HHH
T ss_pred             CcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcH-HHH
Confidence            8899999999999999999998875432     367899999999987432   22221121  399999999987 567


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----C----HHHHHHHHH
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----D----AEGLEEIRR  323 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~  323 (364)
                      .++++++++|+++.+|....           .+.      .++...+..+++++.+++...     .    .+.++++++
T Consensus       255 ~~~~~l~~~G~iv~~G~~~~-----------~~~------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  317 (357)
T 1zsy_A          255 ELLRQLARGGTMVTYGGMAK-----------QPV------VASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCD  317 (357)
T ss_dssp             HHHTTSCTTCEEEECCCCTT-----------CCB------CCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHH
T ss_pred             HHHHhhCCCCEEEEEecCCC-----------CCC------CCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHH
Confidence            79999999999999986411           011      001113456888998876521     1    246788999


Q ss_pred             HHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       324 ~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++|++++.+.++|+|+|+++||+.+.+++..||+|+++
T Consensus       318 l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          318 LIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            9999999988889999999999999999988889999975

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.3e-52  Score=383.27  Aligned_cols=305  Identities=22%  Similarity=0.301  Sum_probs=246.8

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ++|||+++++  +++.++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.   ..+|+++|||++|+|+++|++
T Consensus         3 ~tMka~~~~~--~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~   76 (315)
T 3goh_A            3 EQHQVWAYQT--KTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKANPIN---WSNGHVPGVDGAGVIVKVGAK   76 (315)
T ss_dssp             CEEEEEEEET--TTTEEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC---CCTTCCCCSEEEEEEEEECTT
T ss_pred             cceEEEEEeC--CCCeeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc---CCCCCEeeeeeEEEEEEeCCC
Confidence            3699999996  56779999 99999999999999999999999999999986532   368999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCch
Q 017901          107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~  186 (364)
                      +++|++||||++.... ..+|+|+||+++|.+.++++|+++++++||+++++++|||+++ +.+++++|++|||+|+ |+
T Consensus        77 v~~~~vGdrV~~~~~~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~  153 (315)
T 3goh_A           77 VDSKMLGRRVAYHTSL-KRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GA  153 (315)
T ss_dssp             SCGGGTTCEEEEECCT-TSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-SH
T ss_pred             CCCCCCCCEEEEeCCC-CCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-CH
Confidence            9999999999998632 2469999999999999999999999999999999999999999 8899999999999997 99


Q ss_pred             HHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEE
Q 017901          187 VGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT  266 (364)
Q Consensus       187 ~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~  266 (364)
                      +|++++|+|+.+|++|+++++.+++++++++|++++++    + .+.+.+++|++|||+|++ .+..++++++++|+++.
T Consensus       154 vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~----d-~~~v~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~  227 (315)
T 3goh_A          154 VNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYR----E-PSQVTQKYFAIFDAVNSQ-NAAALVPSLKANGHIIC  227 (315)
T ss_dssp             HHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEES----S-GGGCCSCEEEEECC--------TTGGGEEEEEEEEE
T ss_pred             HHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEc----C-HHHhCCCccEEEECCCch-hHHHHHHHhcCCCEEEE
Confidence            99999999999999999999555568999999999884    2 333342399999999998 66899999999999999


Q ss_pred             EccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-------HHHHHHHHHHHHcCCceeccceeec
Q 017901          267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-------AEGLEEIRRLSETGKLKIPVDKTFH  339 (364)
Q Consensus       267 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~i~~~~~~~~~  339 (364)
                      +|....            ..    ........+..+++.+.+++...+       .+.++++++++++|++++.++++|+
T Consensus       228 ~g~~~~------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~  291 (315)
T 3goh_A          228 IQDRIP------------AP----IDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFR  291 (315)
T ss_dssp             ECCC--------------------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEE
T ss_pred             EeCCCC------------cc----ccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEec
Confidence            986410            00    111111122223333333222112       2357889999999999999999999


Q ss_pred             cccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          340 MTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       340 l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      |+|+++||+.+.  +..||+|++++
T Consensus       292 l~~~~~A~~~~~--~~~gKvvi~~~  314 (315)
T 3goh_A          292 FEQMIEALDHSE--QTKLKTVLTLN  314 (315)
T ss_dssp             GGGHHHHHHHHH--HHCCCEEEESC
T ss_pred             HHHHHHHHHHHH--hcCCcEEEEec
Confidence            999999999998  66799999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-51  Score=381.94  Aligned_cols=313  Identities=28%  Similarity=0.433  Sum_probs=265.6

Q ss_pred             cccceeeEEecccCCCceEEE-cccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           25 VTTSCRAVVLPRFGGPEVLEV-RPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~-~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      ++.+|||+++.++++++.+++ + +.|.|+|+++||+|||.++|||++|++.+.|.++.  ...+|+++|||++|+|+++
T Consensus        26 ~~~~Mka~~~~~~g~~~~l~~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~v  102 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEVLKLRS-DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAV  102 (351)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEE
T ss_pred             CcceEEEEEEccCCCcceeEEee-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcCCceeEEEEEEE
Confidence            466799999999998888999 8 99999999999999999999999999999986432  2357999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcC
Q 017901          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG  183 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~  183 (364)
                      |+++++|++||||++...   .+|+|+||++++.+.++++|+++++++||++++++.|||+++.+.+++++|++|+|+|+
T Consensus       103 G~~v~~~~vGdrV~~~~~---~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  179 (351)
T 1yb5_A          103 GDNASAFKKGDRVFTSST---ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA  179 (351)
T ss_dssp             CTTCTTCCTTCEEEESCC---SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETC
T ss_pred             CCCCCCCCCCCEEEEeCC---CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECC
Confidence            999999999999998753   35999999999999999999999999999999999999999977899999999999998


Q ss_pred             CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhh
Q 017901          184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNF  257 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~  257 (364)
                      +|++|++++|+|+..|++|+++++++++ +.++++|++.++|+++.++.+.+.     +++|++|||+|++ .+..++++
T Consensus       180 sggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~  258 (351)
T 1yb5_A          180 SGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSL  258 (351)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHH
T ss_pred             CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHh
Confidence            8999999999999999999999887665 788999999999988776665553     1499999999987 88999999


Q ss_pred             ccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec-cCHHH----HHHHHHHHHcCCcee
Q 017901          258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR-ADAEG----LEEIRRLSETGKLKI  332 (364)
Q Consensus       258 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~g~i~~  332 (364)
                      ++++|+++.+|....           ...        +...++.+++++.+++.. ...++    ++.+.+++.+|++++
T Consensus       259 l~~~G~iv~~g~~~~-----------~~~--------~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~  319 (351)
T 1yb5_A          259 LSHGGRVIVVGSRGT-----------IEI--------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKP  319 (351)
T ss_dssp             EEEEEEEEECCCCSC-----------EEE--------CTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ccCCCEEEEEecCCC-----------Ccc--------CHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccC
Confidence            999999999985410           000        111345678888887542 12333    445666788899999


Q ss_pred             ccceeeccccHHHHHHH-HhcCCCCCeEEEEc
Q 017901          333 PVDKTFHMTQVREAHEA-KDKRLIPGKVVLEF  363 (364)
Q Consensus       333 ~~~~~~~l~~~~eA~~~-~~~~~~~gkvvi~~  363 (364)
                      .++++|+|+|+++||+. +.+++..||+|+++
T Consensus       320 ~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          320 VIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             CEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999999999999998 66667789999974

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.6e-51  Score=380.61  Aligned_cols=308  Identities=23%  Similarity=0.280  Sum_probs=265.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++++++.+  ++++ +.|.|+|++|||+|||.++|||++|++.+.|..+. .+..+|+++|||++|+|+++|++++
T Consensus         1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~e~~G~V~~vG~~v~   76 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVV-DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQ-YAYGLPLTLGHEGVGTVAELGEGVT   76 (345)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTT-CCSCSSEECCSEEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCc--eEEE-EecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCc-cCCCCCcccCcccEEEEEEECCCCC
Confidence            899999988876  8899 99999999999999999999999999999986542 2347899999999999999999999


Q ss_pred             CCCCCCEEEEecC----------------------------CCCCCCcceeEEeec-CCccccCCCCCChhhhccccchH
Q 017901          109 SLTVGQEVFGALH----------------------------PTAVRGTYADYAVLS-EDELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       109 ~~~~Gd~V~~~~~----------------------------~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      +|++||||+....                            ....+|+|+||++++ .+.++++|+ +++++||++++++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~  155 (345)
T 3jv7_A           77 GFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAG  155 (345)
T ss_dssp             SCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTT
T ss_pred             CCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhH
Confidence            9999999998532                            112479999999999 899999999 9999999999999


Q ss_pred             HHHHHHHHH-hcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-
Q 017901          160 LTAWRALKC-AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-  235 (364)
Q Consensus       160 ~ta~~~l~~-~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-  235 (364)
                      +|||+++.+ ...+++|++|+|+|+ |++|++++|+|+.+ |++|+++.+++++ ++++++|+++++++++ ++.+.++ 
T Consensus       156 ~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~  233 (345)
T 3jv7_A          156 LTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRE  233 (345)
T ss_dssp             HHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHH
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHH
Confidence            999999966 448999999999995 99999999999999 6799999776665 8899999999999876 5555544 


Q ss_pred             ---C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEe
Q 017901          236 ---G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYM  311 (364)
Q Consensus       236 ---g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                         + ++|++|||+|++..+..++++|+++|+++.+|....           .+.    .  +++ .++.+++++.+++.
T Consensus       234 ~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-----------~~~----~--~~~-~~~~~~~~i~g~~~  295 (345)
T 3jv7_A          234 LTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAG-----------AHA----K--VGF-FMIPFGASVVTPYW  295 (345)
T ss_dssp             HHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTT-----------CCE----E--EST-TTSCTTCEEECCCS
T ss_pred             HhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC-----------CCC----C--cCH-HHHhCCCEEEEEec
Confidence               1 399999999998789999999999999999987511           011    0  111 46778899988875


Q ss_pred             ccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          312 RADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       312 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      . +.++++++++++++|++++ ++++|+|+|+++||+.+.+++..||+|+++
T Consensus       296 ~-~~~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          296 G-TRSELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             C-CHHHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             C-CHHHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            5 5789999999999999998 568999999999999999999999999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=8.8e-53  Score=389.62  Aligned_cols=314  Identities=18%  Similarity=0.202  Sum_probs=262.9

Q ss_pred             ccccceeeEEec--cc-CCCceEEEcccc---------cCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcc
Q 017901           24 LVTTSCRAVVLP--RF-GGPEVLEVRPNV---------EVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLI   91 (364)
Q Consensus        24 ~~~~~~~a~~~~--~~-g~~~~~~~~~~~---------~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~   91 (364)
                      .+|.+|||+++.  ++ ++++.++++ +.         |.|+|++|||+|||.++|||++|++.+.|.++.  +..+|++
T Consensus         6 ~~p~~mka~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v   82 (349)
T 3pi7_A            6 TIPSEMKALLLVGDGYTKTPSGSALE-AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ--PRVKGRP   82 (349)
T ss_dssp             CCCSEEEEEEECSCBSCSSCCCSCCC-CSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS--CBCTTSB
T ss_pred             CCchhheEEEEEccccCCCcccceEE-EeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC--CCCCCCC
Confidence            478899999999  66 456788998 88         999999999999999999999999999996532  3468999


Q ss_pred             cccceeEEEEeecCCC-CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhc
Q 017901           92 LGRDISGEVAAVGASV-RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA  170 (364)
Q Consensus        92 ~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~  170 (364)
                      +|||++|+|+++|+++ ++|++||||++... ...+|+|+||+++|.+.++++|+++++++||++++.++|||+++ +.+
T Consensus        83 ~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~  160 (349)
T 3pi7_A           83 AGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-LSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIV  160 (349)
T ss_dssp             CCSEEEEEEEEECSSHHHHHHTTCEEEEECT-TSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HHH
T ss_pred             ccceEEEEEEEECCCccCCCCCCCEEEEecc-CCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HHH
Confidence            9999999999999999 99999999998852 12469999999999999999999999999999999999999766 556


Q ss_pred             ccCCC-CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc------CCccEEE
Q 017901          171 RMSEG-QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK------GKFDAVL  242 (364)
Q Consensus       171 ~~~~g-~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~------g~~D~vi  242 (364)
                      + ++| ++++|+||+|++|++++|+|+..|++|+++++++++ +.++++|+++++|+++.++.+.++      + +|++|
T Consensus       161 ~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g-~D~vi  238 (349)
T 3pi7_A          161 K-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQ-PRIFL  238 (349)
T ss_dssp             H-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHC-CCEEE
T ss_pred             h-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCC-CcEEE
Confidence            6 666 799999999999999999999999999999876654 889999999999998887776664      5 99999


Q ss_pred             ECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh-hhhhccceeEEEEEecc--------
Q 017901          243 DTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM-QTWYSYGIDYSYIYMRA--------  313 (364)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------  313 (364)
                      ||+|++ .+..++++++++|+++.+|....           .+.      .++. ..++.+++++.+++...        
T Consensus       239 d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~-----------~~~------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  300 (349)
T 3pi7_A          239 DAVTGP-LASAIFNAMPKRARWIIYGRLDP-----------DAT------VIREPGQLIFQHKHIEGFWLSEWMRQFKER  300 (349)
T ss_dssp             ESSCHH-HHHHHHHHSCTTCEEEECCCSCC-----------SCC------CCSCTHHHHHSCCEEEECCHHHHHHHTHHH
T ss_pred             ECCCCh-hHHHHHhhhcCCCEEEEEeccCC-----------CCC------CCCchhhhhccccEEEEEEehhhhhhCcHH
Confidence            999998 77999999999999999996511           011      0111 24567899999987531        


Q ss_pred             CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ..+.++++++++++|++++.++++|+|+|+++||+.+. ++..||+|+++
T Consensus       301 ~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          301 RGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             HHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             HHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence            14578888999999999999999999999999999554 45669999975

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.6e-51  Score=375.68  Aligned_cols=316  Identities=21%  Similarity=0.287  Sum_probs=267.1

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      +||++|||+++.+++++  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+.  ...+|+++|||++|+|+++
T Consensus         1 ~~p~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~v   75 (347)
T 2hcy_A            1 SIPETQKGVIFYESHGK--LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL--PVKLPLVGGHEGAGVVVGM   75 (347)
T ss_dssp             CCCSEEEEEEESSTTCC--CEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSEECCCEEEEEEEEE
T ss_pred             CCCcccEEEEEeCCCCC--CEEE-EeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCC--CCCCCcccCccceEEEEEE
Confidence            36788999999988754  8888 99999999999999999999999999999986431  2367999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchH
Q 017901          104 GASVRSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      |+++++|++||||+....                        ....+|+|+||+++|.+.++++|+++++++||++++++
T Consensus        76 G~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  155 (347)
T 2hcy_A           76 GENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAG  155 (347)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHH
T ss_pred             CCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhH
Confidence            999999999999986321                        01246999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCC-ChhHHHHhc--
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYS-SKDIELAIK--  235 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~-~~~~~~~i~--  235 (364)
                      +|||+++. ..++++|++|+|+|++|++|++++|+++..|++|+++.+++++ +.++++|++.++|+. ..++.+.+.  
T Consensus       156 ~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~  234 (347)
T 2hcy_A          156 ITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKA  234 (347)
T ss_dssp             HHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHH
T ss_pred             HHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHH
Confidence            99999994 5689999999999988999999999999999999999876654 778899999888876 345544443  


Q ss_pred             --CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       236 --g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                        +++|++||++|....+..++++|+++|+++.+|....           .+.      .++...++.+++++.+++.. 
T Consensus       235 ~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----------~~~------~~~~~~~~~~~~~i~g~~~~-  296 (347)
T 2hcy_A          235 TDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAG-----------AKC------CSDVFNQVVKSISIVGSYVG-  296 (347)
T ss_dssp             HTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTT-----------CEE------EEEHHHHHHTTCEEEECCCC-
T ss_pred             hCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCC-----------CCC------CCCHHHHhhCCcEEEEccCC-
Confidence              2399999999986689999999999999999987511           011      01111355688899887654 


Q ss_pred             CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +.++++++++++++|++++. +++|+|+|+++||+.+.+++..||+|++++
T Consensus       297 ~~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          297 NRADTREALDFFARGLVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             CHHHHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             CHHHHHHHHHHHHhCCCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            57889999999999999886 579999999999999999888899999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=5.7e-51  Score=375.87  Aligned_cols=309  Identities=27%  Similarity=0.344  Sum_probs=263.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++++++++  ++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.  ...+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~GhE~~G~V~~vG~~v~   75 (339)
T 1rjw_A            1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV--KPKLPLIPGHEGVGIVEEVGPGVT   75 (339)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCc--CCCCCeeccccceEEEEEECCCCC
Confidence            799999987754  8888 99999999999999999999999999999986431  236799999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      +|++||||+....                        ....+|+|+||+++|.+.++++|+++++++||++++++.|||+
T Consensus        76 ~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  155 (339)
T 1rjw_A           76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYK  155 (339)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred             cCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHH
Confidence            9999999986321                        0124699999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---CCccE
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---GKFDA  240 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---g~~D~  240 (364)
                      ++. ..++++|++|+|+|+ |++|++++|+|+..|++|+++.+++++ +.++++|+++++|+++.++.+.+.   +++|+
T Consensus       156 ~l~-~~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~  233 (339)
T 1rjw_A          156 ALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA  233 (339)
T ss_dssp             HHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred             HHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCE
Confidence            995 458999999999997 889999999999999999999877665 788999999999987666655443   33999


Q ss_pred             EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE  320 (364)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (364)
                      +|||+|++..+..++++++++|+++.+|....            +.      .++...++.+++++.+++.. +.+++++
T Consensus       234 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~~~~~~~i~g~~~~-~~~~~~~  294 (339)
T 1rjw_A          234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------------EM------PIPIFDTVLNGIKIIGSIVG-TRKDLQE  294 (339)
T ss_dssp             EEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------------EE------EEEHHHHHHTTCEEEECCSC-CHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEecccCC------------CC------ccCHHHHHhCCcEEEEeccC-CHHHHHH
Confidence            99999986689999999999999999987511            10      01111355678888887654 5788999


Q ss_pred             HHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +++++.+|++++. +++|+|+|+++||+.+.+++..||+|++++
T Consensus       295 ~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  337 (339)
T 1rjw_A          295 ALQFAAEGKVKTI-IEVQPLEKINEVFDRMLKGQINGRVVLTLE  337 (339)
T ss_dssp             HHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHcCCCCcc-EEEEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence            9999999999886 579999999999999999888899999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=6.4e-51  Score=380.87  Aligned_cols=313  Identities=19%  Similarity=0.285  Sum_probs=261.8

Q ss_pred             cccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEe
Q 017901           23 FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (364)
Q Consensus        23 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (364)
                      .+.|++||++++.+++.+  ++++ +.|.|+|+++||+|||.++|||++|++.+.|. +   ...+|+++|||++|+|++
T Consensus         3 ~~~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~---~~~~P~v~GhE~~G~V~~   75 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSP--LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPK-K---KALFPVVLGHECAGIVES   75 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S---CCCSSBCCCCEEEEEEEE
T ss_pred             CCCChheeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C---CCCCCcccCccccEEEEE
Confidence            356788999999987754  7888 99999999999999999999999999999885 2   236799999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCC-----------------------------C-------------------CCCCcceeEEe
Q 017901          103 VGASVRSLTVGQEVFGALHP-----------------------------T-------------------AVRGTYADYAV  134 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~~~-----------------------------~-------------------~~~g~~~~~~~  134 (364)
                      +|+++++|++||||+.....                             +                   ...|+|+||++
T Consensus        76 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~  155 (376)
T 1e3i_A           76 VGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTV  155 (376)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEE
T ss_pred             ECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEE
Confidence            99999999999999985310                             0                   01489999999


Q ss_pred             ecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HH
Q 017901          135 LSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-ID  212 (364)
Q Consensus       135 ~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~  212 (364)
                      +|.+.++++|+++++++||++++++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.++++ ++
T Consensus       156 v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  234 (376)
T 1e3i_A          156 VSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFP  234 (376)
T ss_dssp             EEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             eccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            999999999999999999999999999999987889999999999999 69999999999999999 8999976655 48


Q ss_pred             HHHHcCCceeeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccc
Q 017901          213 RVLAAGAEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLP  285 (364)
Q Consensus       213 ~~~~~g~~~v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  285 (364)
                      .++++|+++++|+++  .++.+.++    +++|+||||+|++..+..++++++++ |+++.+|....            +
T Consensus       235 ~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~------------~  302 (376)
T 1e3i_A          235 KAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------------E  302 (376)
T ss_dssp             HHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------------E
T ss_pred             HHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCC------------c
Confidence            899999999998874  45555443    34999999999866899999999999 99999986310            1


Q ss_pred             hhhHHHHHHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901          286 IATTVLLKKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL  361 (364)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi  361 (364)
                      .      .++...++.++ ++.+++...  ..++++++++++++|++++  .++++|+|+|+++||+.+.+++. +|+|+
T Consensus       303 ~------~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi  374 (376)
T 1e3i_A          303 M------TIPTVDVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTIL  374 (376)
T ss_dssp             E------EEEHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEE
T ss_pred             c------ccCHHHhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEE
Confidence            1      00111244556 777765421  2578999999999999874  68899999999999999988774 89999


Q ss_pred             Ec
Q 017901          362 EF  363 (364)
Q Consensus       362 ~~  363 (364)
                      +|
T Consensus       375 ~~  376 (376)
T 1e3i_A          375 TF  376 (376)
T ss_dssp             EC
T ss_pred             eC
Confidence            75

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2e-51  Score=378.26  Aligned_cols=314  Identities=23%  Similarity=0.345  Sum_probs=263.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.++|+++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.+.......+|+++|||++|+|+++|++++
T Consensus         2 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT   80 (333)
T ss_dssp             CEEEEESSCSSGGGEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred             cEEEEEcccCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence            899999999888889999 9999999999999999999999999999998541110035799999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhh--hccccchHHHHHHHHHHhcccCCCCEEEEEcCCch
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD--ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~--aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~  186 (364)
                      +|++||||+....   ..|+|+||+++|.+.++++|+++++++  ||+++++++|||+++.+.+++++|++|+|+|++|+
T Consensus        81 ~~~~GdrV~~~~~---~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~gg  157 (333)
T 1wly_A           81 DFTVGERVCTCLP---PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGG  157 (333)
T ss_dssp             SCCTTCEEEECSS---SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTST
T ss_pred             CCCCCCEEEEecC---CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccH
Confidence            9999999987642   249999999999999999999999999  99999999999999977889999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccC
Q 017901          187 VGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKR  260 (364)
Q Consensus       187 ~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~  260 (364)
                      +|++++|+++..|++|+++++++++ +.++++|++.++|+++.++.+.+.     +++|++|||+|+. .+..+++++++
T Consensus       158 iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~  236 (333)
T 1wly_A          158 MGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKD-TLQKSLDCLRP  236 (333)
T ss_dssp             THHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTT-THHHHHHTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHH-HHHHHHHhhcc
Confidence            9999999999999999999888754 778889999999987766555443     2399999999995 99999999999


Q ss_pred             CCEEEEEccCchhhhhccccccccchhhHHHHHHhhh-hhhccc--eeEEEEEec--cC----HHHHHHHHHHHHcCCce
Q 017901          261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-TWYSYG--IDYSYIYMR--AD----AEGLEEIRRLSETGKLK  331 (364)
Q Consensus       261 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~--~~----~~~~~~~~~~~~~g~i~  331 (364)
                      +|+++.+|....           .+. .     ++.. .++.++  +++.+++..  .+    .+.++++++++.+|+++
T Consensus       237 ~G~iv~~g~~~~-----------~~~-~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  299 (333)
T 1wly_A          237 RGMCAAYGHASG-----------VAD-P-----IRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLH  299 (333)
T ss_dssp             EEEEEECCCTTC-----------CCC-C-----CCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCEEEEEecCCC-----------CcC-C-----CChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcC
Confidence            999999986511           010 0     0111 244566  777665431  12    34789999999999999


Q ss_pred             eccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          332 IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       332 ~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +.++++|+|+|+++||+.+.+++..||+|++++
T Consensus       300 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  332 (333)
T 1wly_A          300 SSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQ  332 (333)
T ss_dssp             CCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETT
T ss_pred             CCcceEEeHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            999999999999999999999888899999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.6e-51  Score=378.04  Aligned_cols=313  Identities=20%  Similarity=0.216  Sum_probs=262.5

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      ...+|+++.+.+++  +.++++ +.|.|+|++|||+|||.++|||++|++.+.|..+   ...+|+++|||++|+|+++|
T Consensus        19 ~~~~~~a~~~~~~~--~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG   92 (369)
T 1uuf_A           19 AGLKIKAVGAYSAK--QPLEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA---GTVYPCVPGHEIVGRVVAVG   92 (369)
T ss_dssp             ----CEEEEBSSTT--SCCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS---CCCSSBCCCCCEEEEEEEEC
T ss_pred             cCceEEEEEEcCCC--CCcEEE-EecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCC---CCCCCeecccCceEEEEEEC
Confidence            34578999988654  448999 9999999999999999999999999999998543   23579999999999999999


Q ss_pred             CCCCCCCCCCEEEEecC--------------------------------CCCCCCcceeEEeecCCccccCCCC-CChhh
Q 017901          105 ASVRSLTVGQEVFGALH--------------------------------PTAVRGTYADYAVLSEDELTPKPVS-VTHAD  151 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~-~~~~~  151 (364)
                      +++++|++||||+....                                ....+|+|+||+++|.+.++++|++ +++++
T Consensus        93 ~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~  172 (369)
T 1uuf_A           93 DQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAA  172 (369)
T ss_dssp             TTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHH
T ss_pred             CCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHH
Confidence            99999999999986321                                0024699999999999999999999 99999


Q ss_pred             hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhH
Q 017901          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDI  230 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~  230 (364)
                      ||++++++.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|++|++++++++ ++.++++|+++++++++.++
T Consensus       173 aa~l~~~~~tA~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~  250 (369)
T 1uuf_A          173 VAPLLCAGITTYSPLR-HWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADE  250 (369)
T ss_dssp             HGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHH
T ss_pred             hhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHH
Confidence            9999999999999995 478999999999995 99999999999999999999986655 48889999999999988776


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY  310 (364)
Q Consensus       231 ~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (364)
                      .+.+.+++|++|||+|++..+..++++++++|+++.+|....            +.     ..++...++.+++++.+++
T Consensus       251 ~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~-----~~~~~~~~~~~~~~i~g~~  313 (369)
T 1uuf_A          251 MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT------------PH-----KSPEVFNLIMKRRAIAGSM  313 (369)
T ss_dssp             HHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------------------CHHHHHTTTCEEEECC
T ss_pred             HHHhhcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCC------------Cc-----cccCHHHHHhCCcEEEEee
Confidence            665553399999999987678999999999999999987511            00     0122224567889999887


Q ss_pred             eccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          311 MRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       311 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      .. +.+++.++++++++|++++.+ +.|+|+|+++||+.+.+++..||+|++++
T Consensus       314 ~~-~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  365 (369)
T 1uuf_A          314 IG-GIPETQEMLDFCAEHGIVADI-EMIRADQINEAYERMLRGDVKYRFVIDNR  365 (369)
T ss_dssp             SC-CHHHHHHHHHHHHHHTCCCCE-EEECGGGHHHHHHHHHTTCSSSEEEEEGG
T ss_pred             cC-CHHHHHHHHHHHHhCCCCcce-EEEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence            54 578899999999999998876 47999999999999999888899999864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=7.1e-51  Score=380.16  Aligned_cols=314  Identities=20%  Similarity=0.232  Sum_probs=261.5

Q ss_pred             cccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEe
Q 017901           23 FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (364)
Q Consensus        23 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (364)
                      .++|++|||+++.+++++  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+    ..+|+++|||++|+|++
T Consensus         4 ~~~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~   76 (373)
T 1p0f_A            4 AGKDITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVES   76 (373)
T ss_dssp             TTSCEEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEE
T ss_pred             cCCcceeEEEEEEcCCCC--eeEE-EeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC----CCCCcccCcCceEEEEE
Confidence            356788999999987754  7888 9999999999999999999999999999998643    36799999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCC-------------------------C-------------------CCCCcceeEEeecCC
Q 017901          103 VGASVRSLTVGQEVFGALHP-------------------------T-------------------AVRGTYADYAVLSED  138 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~~~-------------------------~-------------------~~~g~~~~~~~~~~~  138 (364)
                      +|+++++|++||||+.....                         +                   ...|+|+||+++|.+
T Consensus        77 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  156 (373)
T 1p0f_A           77 IGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADI  156 (373)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETT
T ss_pred             ECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchh
Confidence            99999999999999986420                         0                   024899999999999


Q ss_pred             ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHH
Q 017901          139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA  216 (364)
Q Consensus       139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~  216 (364)
                      .++++|++++++ ||++++++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.++++ ++++++
T Consensus       157 ~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~  234 (373)
T 1p0f_A          157 AVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE  234 (373)
T ss_dssp             SEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred             hEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence            999999999999 9999999999999987889999999999999 69999999999999999 8999976655 488999


Q ss_pred             cCCceeeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhH
Q 017901          217 AGAEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATT  289 (364)
Q Consensus       217 ~g~~~v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (364)
                      +|+++++++++  .++.+.++    +++|+||||+|++..+..++++++++ |+++.+|....          +.+.   
T Consensus       235 lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----------~~~~---  301 (373)
T 1p0f_A          235 LGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----------NERL---  301 (373)
T ss_dssp             TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----------TCCE---
T ss_pred             cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCC----------CCcc---
Confidence            99999998874  45555443    34999999999866899999999999 99999986511          0000   


Q ss_pred             HHHHHhhhhhhccceeEEEEEec-cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          290 VLLKKRMQTWYSYGIDYSYIYMR-ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                         .++...+..++ ++.+++.. ...++++++++++++|++++  .++++|+|+|+++||+.+.+++. +|+|++|
T Consensus       302 ---~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          302 ---PLDPLLLLTGR-SLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             ---EECTHHHHTTC-EEEECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             ---ccCHHHhccCc-eEEeeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence               00111234455 77776542 12468999999999999874  67899999999999999988775 8999975

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=2.8e-51  Score=380.03  Aligned_cols=312  Identities=20%  Similarity=0.212  Sum_probs=262.8

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhh-hhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTR-MRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      |||+++.+++.   ++++ +.|.|+|++|||+|||.++|||++|++ .+.|..+    ..+|+++|||++|+|+++|+++
T Consensus         1 MkA~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~p~v~G~E~~G~V~~vG~~v   72 (352)
T 3fpc_A            1 MKGFAMLSIGK---VGWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG----ERHNMILGHEAVGEVVEVGSEV   72 (352)
T ss_dssp             CEEEEEEETTE---EEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC----CCSSEECCCEEEEEEEEECTTC
T ss_pred             CeEEEEccCCC---ceEE-eCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC----CCCCcccCCcceEEEEEECCCC
Confidence            89999996654   7888 999999999999999999999999999 6688543    3679999999999999999999


Q ss_pred             CCCCCCCEEEEecC--------------------------CCCCCCcceeEEeecCC--ccccCCCCCChhhhccccchH
Q 017901          108 RSLTVGQEVFGALH--------------------------PTAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~--------------------------~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      ++|++||||+....                          ....+|+|+||++++.+  .++++|+++++++||.++.++
T Consensus        73 ~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~  152 (352)
T 3fpc_A           73 KDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMM  152 (352)
T ss_dssp             CSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHH
T ss_pred             CcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchh
Confidence            99999999997421                          11257999999999976  899999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--  235 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--  235 (364)
                      .|||+++ +.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ ++++++|+++++++++.++.+.++  
T Consensus       153 ~ta~~al-~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~  230 (352)
T 3fpc_A          153 TTGFHGA-ELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKA  230 (352)
T ss_dssp             HHHHHHH-HHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHH
T ss_pred             HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHH
Confidence            9999998 789999999999999 69999999999999999 89999887664 889999999999998877776664  


Q ss_pred             --C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec
Q 017901          236 --G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR  312 (364)
Q Consensus       236 --g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (364)
                        | ++|+||||+|++..+..++++|+++|+++.+|....          ..+.    .++........+++++.+++..
T Consensus       231 t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~----------~~~~----~~~~~~~~~~~~~~~i~g~~~~  296 (352)
T 3fpc_A          231 TDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGE----------GDNI----DIPRSEWGVGMGHKHIHGGLCP  296 (352)
T ss_dssp             TTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCS----------CSEE----EEETTTTGGGTBCEEEEEBCCC
T ss_pred             cCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCC----------CCce----ecchhHhhhhccccEEEEeecc
Confidence              2 399999999996689999999999999999996511          0000    0000001233567888887654


Q ss_pred             cCHHHHHHHHHHHHcCCcee--ccceeec-cccHHHHHHHHhcCCCC-CeEEEEcC
Q 017901          313 ADAEGLEEIRRLSETGKLKI--PVDKTFH-MTQVREAHEAKDKRLIP-GKVVLEFD  364 (364)
Q Consensus       313 ~~~~~~~~~~~~~~~g~i~~--~~~~~~~-l~~~~eA~~~~~~~~~~-gkvvi~~~  364 (364)
                      ...++++++++++++|++++  +++++|+ |+|+++||+.+.+++.. +|+|++++
T Consensus       297 ~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          297 GGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             CHHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             CchhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            34678999999999999987  4889999 99999999999987654 89999874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-51  Score=380.11  Aligned_cols=313  Identities=21%  Similarity=0.266  Sum_probs=264.0

Q ss_pred             ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      +++|||+++.+++++  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+    ..+|+++|||++|+|+++|+
T Consensus         4 ~~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~   76 (371)
T 1f8f_A            4 LKDIIAAVTPCKGAD--FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEAIGP   76 (371)
T ss_dssp             CEEEEEEEBCSTTCC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEEECT
T ss_pred             cccceEEEEcCCCCC--eEEE-EecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC----CCCCcccCcccceEEEEeCC
Confidence            356999999987755  8888 9999999999999999999999999999998543    35799999999999999999


Q ss_pred             CCCCCCCCCEEEEec------------------------C--------------CC-------CCCCcceeEEeecCCcc
Q 017901          106 SVRSLTVGQEVFGAL------------------------H--------------PT-------AVRGTYADYAVLSEDEL  140 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~------------------------~--------------~~-------~~~g~~~~~~~~~~~~~  140 (364)
                      ++++|++||||+...                        .              .+       ...|+|+||++++.+.+
T Consensus        77 ~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~  156 (371)
T 1f8f_A           77 NVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNT  156 (371)
T ss_dssp             TCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhhe
Confidence            999999999999742                        0              00       12489999999999999


Q ss_pred             ccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcC
Q 017901          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAG  218 (364)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g  218 (364)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|+++.+++++ ++++++|
T Consensus       157 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lG  235 (371)
T 1f8f_A          157 VKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG  235 (371)
T ss_dssp             EEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT
T ss_pred             EECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC
Confidence            999999999999999999999999997788999999999999 69999999999999999 69999776655 8899999


Q ss_pred             CceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901          219 AEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (364)
Q Consensus       219 ~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (364)
                      +++++++++.++.+.++    +++|+||||+|++..+..++++|+++|+++.+|....          ..+.      .+
T Consensus       236 a~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----------~~~~------~~  299 (371)
T 1f8f_A          236 ATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----------GTTA------QF  299 (371)
T ss_dssp             CSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----------TCCC------CC
T ss_pred             CCEEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCC----------CCcc------cc
Confidence            99999998777666554    3499999999986689999999999999999987511          0000      01


Q ss_pred             hhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          295 RMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +...++.+++++.+++...  ..++++++++++++|++++  .+++ |+|+|+++||+.+.+++. +|+|++++
T Consensus       300 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          300 DVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             CHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             CHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            1113556788888876532  2468999999999999986  4777 999999999999988876 89999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.9e-51  Score=378.61  Aligned_cols=313  Identities=34%  Similarity=0.468  Sum_probs=267.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++.++.++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.  ...+|+++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP--KLPLPHVLGADGSGVVDAVGPGVE   77 (343)
T ss_dssp             CEEEEECSSSSGGGEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST--TCCSSEECCSEEEEEEEEECSSCC
T ss_pred             CeEEEEecCCCCceEEEE-ecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC--CCCCCcccccceEEEEEEECCCCC
Confidence            799999998887779999 99999999999999999999999999999986431  236799999999999999999999


Q ss_pred             CCCCCCEEEEecC---C--------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALH---P--------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~---~--------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      +|++||||+....   .                    ...+|+|+||+++|.+.++++|+++++++||+++.++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           78 GFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             SCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            9999999995321   0                    1236999999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCcc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFD  239 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D  239 (364)
                      +.+.+++++|++|+|+|++|++|++++|+++..|++|+++.+++++ +.++++|+++++|+++.++.+.+.     +++|
T Consensus       158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             HTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCce
Confidence            9665799999999999988999999999999999999999887665 778899999999987766655443     1499


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE  319 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (364)
                      ++||++|+. .+..++++++++|+++.+|....           ...      .++...++.+++++.+++.. ..++++
T Consensus       238 ~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~g~~~~-~~~~~~  298 (343)
T 2eih_A          238 KVVDHTGAL-YFEGVIKATANGGRIAIAGASSG-----------YEG------TLPFAHVFYRQLSILGSTMA-SKSRLF  298 (343)
T ss_dssp             EEEESSCSS-SHHHHHHHEEEEEEEEESSCCCS-----------CCC------CCCTTHHHHTTCEEEECCSC-CGGGHH
T ss_pred             EEEECCCHH-HHHHHHHhhccCCEEEEEecCCC-----------CcC------ccCHHHHHhCCcEEEEecCc-cHHHHH
Confidence            999999955 89999999999999999987511           000      01112355678888887643 567899


Q ss_pred             HHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          320 EIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       320 ~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++++++++|++++.++++|+|+|+++||+.+.+++..||+|+++
T Consensus       299 ~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          299 PILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            99999999999999999999999999999999988889999986

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2e-51  Score=383.02  Aligned_cols=312  Identities=20%  Similarity=0.295  Sum_probs=262.9

Q ss_pred             cccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEe
Q 017901           23 FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (364)
Q Consensus        23 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (364)
                      -.+|++|||+++.+++   .++++ +.|.|+|++|||+|||.++|||++|++.+.|.+    +..+|+++|||++|+|++
T Consensus        18 ~~~p~~mkA~v~~~~~---~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~----~~~~p~v~G~e~~G~V~~   89 (370)
T 4ej6_A           18 LYFQSMMKAVRLESVG---NISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF----PSTPPVTLGHEFCGIVVE   89 (370)
T ss_dssp             ---CCEEEEEEEEETT---EEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSEECCCSEEEEEEE
T ss_pred             cccchheEEEEEecCC---ceEEE-EccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC----CCCCCeecCcceEEEEEE
Confidence            3488899999999654   58999 999999999999999999999999999999964    346799999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecC-----------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchH
Q 017901          103 VGASVRSLTVGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      +|+++++|++||||++...                       ....+|+|+||++++.+.++++|+++++++|| ++.++
T Consensus        90 vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~  168 (370)
T 4ej6_A           90 AGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPL  168 (370)
T ss_dssp             ECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHH
T ss_pred             ECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHH
Confidence            9999999999999997431                       11257999999999999999999999999998 66789


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--  235 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--  235 (364)
                      .|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++ ++++++|+++++|+++.++.+.++  
T Consensus       169 ~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~  246 (370)
T 4ej6_A          169 ACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGP  246 (370)
T ss_dssp             HHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHST
T ss_pred             HHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhh
Confidence            9999999 7899999999999995 9999999999999999 88888776655 889999999999998877766553  


Q ss_pred             -----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901          236 -----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY  310 (364)
Q Consensus       236 -----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (364)
                           |++|+||||+|+...+..++++++++|+++.+|....          ..+.      .++...++.+++++.+++
T Consensus       247 ~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~----------~~~~------~~~~~~~~~~~~~i~g~~  310 (370)
T 4ej6_A          247 VGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQ----------GEKV------EIEPFDILFRELRVLGSF  310 (370)
T ss_dssp             TSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCT----------TCCC------CCCHHHHHHTTCEEEECC
T ss_pred             hhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCC----------CCcc------ccCHHHHHhCCcEEEEec
Confidence                 2499999999987689999999999999999986511          0010      111224677899999987


Q ss_pred             eccCHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCC-CCeEEEEc
Q 017901          311 MRADAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLI-PGKVVLEF  363 (364)
Q Consensus       311 ~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~-~gkvvi~~  363 (364)
                      ..  ..+++++++++++|+++  +.++++|+|+|+++||+.+.+++. .+|+++++
T Consensus       311 ~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          311 IN--PFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             SC--TTCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             cC--hHHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcc
Confidence            64  35689999999999996  468999999999999999988774 46888765

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=1.3e-50  Score=378.58  Aligned_cols=315  Identities=21%  Similarity=0.272  Sum_probs=262.3

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      .+|++|||+++.+++++  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+   ...+|+++|||++|+|+++
T Consensus         2 ~~p~~mkA~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~v   75 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESV   75 (373)
T ss_dssp             CCCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEE
T ss_pred             CCccceEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCC---CCCCCccccccccEEEEEE
Confidence            46788999999987754  7888 9999999999999999999999999999998643   2357999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC-------------------------C-------------------CCCCcceeEEeecCCc
Q 017901          104 GASVRSLTVGQEVFGALHP-------------------------T-------------------AVRGTYADYAVLSEDE  139 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~-------------------------~-------------------~~~g~~~~~~~~~~~~  139 (364)
                      |+++++|++||||+.....                         +                   ...|+|+||+++|.+.
T Consensus        76 G~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  155 (373)
T 2fzw_A           76 GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS  155 (373)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhh
Confidence            9999999999999976320                         0                   0248999999999999


Q ss_pred             cccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHHc
Q 017901          140 LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAA  217 (364)
Q Consensus       140 ~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~~  217 (364)
                      ++++|+++++++||++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|+++.++++ +++++++
T Consensus       156 ~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l  234 (373)
T 2fzw_A          156 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF  234 (373)
T ss_dssp             EEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred             eEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence            9999999999999999999999999987889999999999999 59999999999999999 8999976655 4889999


Q ss_pred             CCceeeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHH
Q 017901          218 GAEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTV  290 (364)
Q Consensus       218 g~~~v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (364)
                      |+++++++++  .++.+.++    +++|++|||+|+...+..++++++++ |+++.+|....          +.+.    
T Consensus       235 Ga~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----------~~~~----  300 (373)
T 2fzw_A          235 GATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----------GEEI----  300 (373)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----------TCCE----
T ss_pred             CCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCC----------Ccee----
Confidence            9999998864  34555443    34999999999866899999999999 99999986511          0000    


Q ss_pred             HHHHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          291 LLKKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                        .++...++.++ ++.+++...  ..++++++++++++|+++  +.++++|+|+|+++||+.+.+++. +|+|++|
T Consensus       301 --~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          301 --ATRPFQLVTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             --EECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             --eeCHHHHhcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence              00111234455 777765431  257899999999999988  468899999999999999988876 7999975

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=2.6e-50  Score=372.93  Aligned_cols=308  Identities=21%  Similarity=0.262  Sum_probs=256.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCC-CCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      |||++++++|   .++++ +.|.|+ ++||||||||.|+|||++|++.+.|..+    ..+|+++|||++|+|+++|+++
T Consensus         1 MkAvv~~~~g---~l~v~-e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~----~~~P~i~G~E~~G~V~~vG~~V   72 (346)
T 4a2c_A            1 MKSVVNDTDG---IVRVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA----HYYPITLGHEFSGYIDAVGSGV   72 (346)
T ss_dssp             CEEEEECSSS---CEEEE-ECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS----SSSSBCCCCEEEEEEEEECTTC
T ss_pred             CCEEEEecCC---CEEEE-EEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC----CCCCccccEEEEEEEEEECCCc
Confidence            8999999666   48999 999998 5799999999999999999999988533    3689999999999999999999


Q ss_pred             CCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          108 RSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      +++++||+|......                       ...+|+|+||+++|.++++++|+++++++||++. ...++++
T Consensus        73 ~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~  151 (346)
T 4a2c_A           73 DDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH  151 (346)
T ss_dssp             CSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH
T ss_pred             ccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHH
Confidence            999999999875421                       2357999999999999999999999999998775 3445555


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeE-EEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc------C
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV-SATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK------G  236 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~v-i~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~------g  236 (364)
                      ++ +...+++|++|+|+| +|++|++++|+|+.+|+++ +++.+++++ ++++++|+++++|+++.+..+.++      +
T Consensus       152 ~~-~~~~~~~g~~VlV~G-aG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g  229 (346)
T 4a2c_A          152 AF-HLAQGCENKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF  229 (346)
T ss_dssp             HH-HHTTCCTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred             HH-HHhccCCCCEEEEEC-CCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCC
Confidence            54 788999999999999 5999999999999999965 555555554 889999999999998876655443      5


Q ss_pred             CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc---
Q 017901          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA---  313 (364)
Q Consensus       237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  313 (364)
                       +|++|||+|++..+..++++++++|+++.+|....          .....     ...+..++.+++++.|++...   
T Consensus       230 -~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~----------~~~~~-----~~~~~~~~~k~~~i~G~~~~~~~~  293 (346)
T 4a2c_A          230 -NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQ----------DLHLT-----SATFGKILRKELTVIGSWMNYSSP  293 (346)
T ss_dssp             -SEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSS----------CEEEC-----HHHHHHHHHHTCEEEECCTTCCSS
T ss_pred             -cccccccccccchhhhhhheecCCeEEEEEeccCC----------Ccccc-----ccCHHHHhhceeEEEEEeccccCc
Confidence             99999999998789999999999999999997511          00111     112224677899999886532   


Q ss_pred             -CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          314 -DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       314 -~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                       ..++++++++++++|+++  ++++++|+|+|+++||+.+.+++..||+||.+
T Consensus       294 ~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          294 WPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             TTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             chHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence             246899999999999886  45899999999999999999999999999864

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=4.2e-51  Score=380.48  Aligned_cols=312  Identities=18%  Similarity=0.153  Sum_probs=258.5

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCC--------CCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccc
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVP--------DLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRD   95 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p--------~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e   95 (364)
                      +++.+|||+++.   +++.++++ +.|.|        +|++|||+|||.++|||++|++.+.+.........+|+++|||
T Consensus         4 ~~~~~mka~~~~---~~~~l~~~-~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E   79 (363)
T 3m6i_A            4 SASKTNIGVFTN---PQHDLWIS-EASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHE   79 (363)
T ss_dssp             -CCSCCEEEEEC---TTCCEEEE-ECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCE
T ss_pred             CCcccceeEEEe---CCCcEEEE-EecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcc
Confidence            478899999999   45568999 99999        9999999999999999999999987432222234679999999


Q ss_pred             eeEEEEeecCCCCCCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhh
Q 017901           96 ISGEVAAVGASVRSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHAD  151 (364)
Q Consensus        96 ~~G~V~~vG~~~~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~  151 (364)
                      ++|+|+++|+++++|++||||+....                        ....+|+|+||+++|.+.++++|+ +++++
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~  158 (363)
T 3m6i_A           80 SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYEN  158 (363)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHH
T ss_pred             eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHH
Confidence            99999999999999999999997531                        012579999999999999999999 99999


Q ss_pred             hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCC---
Q 017901          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYS---  226 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~---  226 (364)
                      ||++ .++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |+++..++++ ++++++ +++++++.   
T Consensus       159 aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~  234 (363)
T 3m6i_A          159 GAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVER  234 (363)
T ss_dssp             HHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCS
T ss_pred             HHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccc
Confidence            9987 4788999999 7899999999999995 99999999999999997 8888766654 888898 76666543   


Q ss_pred             --ChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhh
Q 017901          227 --SKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW  299 (364)
Q Consensus       227 --~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (364)
                        ..++.+.++     .++|++|||+|++..+..++++|+++|+++.+|....            ..      .++...+
T Consensus       235 ~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~  296 (363)
T 3m6i_A          235 LSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKN------------EI------QIPFMRA  296 (363)
T ss_dssp             CCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCS------------CC------CCCHHHH
T ss_pred             cchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCC------------Cc------cccHHHH
Confidence              345665554     1399999999998788999999999999999986511            11      0111245


Q ss_pred             hccceeEEEEEeccCHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcC-CCCCeEEEEcC
Q 017901          300 YSYGIDYSYIYMRADAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKR-LIPGKVVLEFD  364 (364)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~-~~~gkvvi~~~  364 (364)
                      +.+++++.+++..  .++++++++++++|+++  +.++++|+|+++++||+.+.++ ...+|+|++++
T Consensus       297 ~~~~~~i~g~~~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  362 (363)
T 3m6i_A          297 SVREVDLQFQYRY--CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSL  362 (363)
T ss_dssp             HHHTCEEEECCSC--SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC
T ss_pred             HhcCcEEEEccCC--HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecC
Confidence            6778888887653  56789999999999994  5688999999999999999988 57789999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.7e-50  Score=375.23  Aligned_cols=312  Identities=20%  Similarity=0.232  Sum_probs=260.9

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      ++++|+++.+.+  .++.++++ +.|.|+|++|||+|||.++|||++|++.+.|..+   ...+|+++|||++|+|+++|
T Consensus         6 ~~m~~~a~~~~~--~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG   79 (357)
T 2cf5_A            6 AERKTTGWAARD--PSGILSPY-TYTLRETGPEDVNIRIICCGICHTDLHQTKNDLG---MSNYPMVPGHEVVGEVVEVG   79 (357)
T ss_dssp             CCCEEEEEEECS--TTCCEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTT---CCCSSBCCCCEEEEEEEEEC
T ss_pred             CcceeEEEEEcc--CCCCcEEE-EecCCCCCCCEEEEEEEEEeecchhhhhhcCCCC---CCCCCeecCcceeEEEEEEC
Confidence            345677777764  44569999 9999999999999999999999999999988543   23679999999999999999


Q ss_pred             CCCCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhc
Q 017901          105 ASVRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADAS  153 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa  153 (364)
                      +++++|++||||+....                               ....+|+|+||+++|.+.++++|+++++++||
T Consensus        80 ~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa  159 (357)
T 2cf5_A           80 SDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA  159 (357)
T ss_dssp             SSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHT
T ss_pred             CCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhh
Confidence            99999999999985320                               00146999999999999999999999999999


Q ss_pred             cccchHHHHHHHHHHhcccC-CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceeeeCCChhH
Q 017901          154 AIPFAALTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAVDYSSKDI  230 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~-~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~~~~~~~~  230 (364)
                      +++++++|||+++. ..+++ +|++|+|+| +|++|++++|+|+.+|++|+++++++++ +.++ ++|+++++++++.+.
T Consensus       160 ~l~~~~~ta~~~l~-~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~  237 (357)
T 2cf5_A          160 PLLCAGVTVYSPLS-HFGLKQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAK  237 (357)
T ss_dssp             GGGTHHHHHHHHHH-HTSTTSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHH
T ss_pred             hhhhhHHHHHHHHH-hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHH
Confidence            99999999999984 57888 999999999 6999999999999999999999877665 6666 999999999877544


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY  310 (364)
Q Consensus       231 ~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (364)
                      ...+.+++|+||||+|++..+..++++++++|+++.+|....            +...     ++.. ++.+++++.+++
T Consensus       238 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~~~-----~~~~-~~~~~~~i~g~~  299 (357)
T 2cf5_A          238 MSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINN------------PLQF-----LTPL-LMLGRKVITGSF  299 (357)
T ss_dssp             HHHSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSS------------CCCC-----CHHH-HHHHTCEEEECC
T ss_pred             HHHhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCC------------Cccc-----cCHH-HHhCccEEEEEc
Confidence            444443399999999987578999999999999999986511            1100     1112 556788888877


Q ss_pred             eccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          311 MRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       311 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      .. ..++++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|++++
T Consensus       300 ~~-~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  351 (357)
T 2cf5_A          300 IG-SMKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVE  351 (357)
T ss_dssp             SC-CHHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETT
T ss_pred             cC-CHHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCC
Confidence            54 578899999999999998866 79999999999999999988899999863

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-50  Score=375.61  Aligned_cols=312  Identities=22%  Similarity=0.272  Sum_probs=256.6

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhcc-CCccccCCCCCcccccceeEEEEee
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g-~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      |.++|||+++.++   +.++++ +.|.|+|+++||+|||.++|||++|++.+.+ ..+. ....+|+++|||++|+|+++
T Consensus         1 m~~~mka~~~~~~---~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~-~~~~~p~v~G~E~~G~V~~v   75 (352)
T 1e3j_A            1 MASDNLSAVLYKQ---NDLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIAD-FIVKDPMVIGHEASGTVVKV   75 (352)
T ss_dssp             ---CCEEEEEEET---TEEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSS-CBCCSCEECCCEEEEEEEEE
T ss_pred             CcccCEEEEEEcC---CcEEEE-EecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCcc-ccCCCCccccccceEEEEEe
Confidence            4567999999964   458999 9999999999999999999999999999874 3221 12357999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchH
Q 017901          104 GASVRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      |+++++|++||||++....                        ...+|+|+||++++.+.++++|+++++++||.+ .++
T Consensus        76 G~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~  154 (352)
T 1e3j_A           76 GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPL  154 (352)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHH
T ss_pred             CCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chH
Confidence            9999999999999975310                        013699999999999999999999999999865 577


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc--
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK--  235 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~--  235 (364)
                      .|||+++ +.+++++|++|+|+| +|++|++++|+|+.+|++|+++.+++++ ++++++|+++++++++ .++.+.+.  
T Consensus       155 ~ta~~al-~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~  232 (352)
T 1e3j_A          155 SVGVHAC-RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER  232 (352)
T ss_dssp             HHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHH
T ss_pred             HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHH
Confidence            8999999 788999999999999 5999999999999999999998876655 8889999999999874 44433331  


Q ss_pred             ------CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEE
Q 017901          236 ------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI  309 (364)
Q Consensus       236 ------g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (364)
                            +++|++|||+|+...+..++++++++|+++.+|....            +.      .++...+..+++++.++
T Consensus       233 ~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~i~g~  294 (352)
T 1e3j_A          233 IRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------------MV------TVPLVNACAREIDIKSV  294 (352)
T ss_dssp             HHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------------CC------CCCHHHHHTTTCEEEEC
T ss_pred             hccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------------Cc------cccHHHHHhcCcEEEEe
Confidence                  1399999999997678999999999999999986410            10      01112456778888887


Q ss_pred             EeccCHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCC-CCCeEEEEcC
Q 017901          310 YMRADAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRL-IPGKVVLEFD  364 (364)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~-~~gkvvi~~~  364 (364)
                      +..  .+++.++++++++|+++  +.++++|+|+++++||+.+.+++ ..+|+|++++
T Consensus       295 ~~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  350 (352)
T 1e3j_A          295 FRY--CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR  350 (352)
T ss_dssp             CSC--SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred             ccc--hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence            643  45688999999999975  56889999999999999999888 6899999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=7.6e-51  Score=376.51  Aligned_cols=311  Identities=24%  Similarity=0.294  Sum_probs=261.8

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhcc-CCccccCCCCCcccccceeEEEEeecC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g-~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      ++|||+++.+++.  .++++ +.|.|+|+++||+|||.++|||++|++.+.| .++. ....+|+++|||++|+|+++|+
T Consensus         3 ~~mka~~~~~~g~--~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~p~v~G~E~~G~V~~vG~   78 (348)
T 2d8a_A            3 EKMVAIMKTKPGY--GAELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQ-SRIKPPQIMGHEVAGEVVEIGP   78 (348)
T ss_dssp             CEEEEEEECSSSS--SCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHH-HHCCSSEECCCEEEEEEEEECT
T ss_pred             CcceEEEEECCCC--CEEEE-ECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCc-ccCCCCCccCccceEEEEEECC
Confidence            4699999998774  58899 9999999999999999999999999999998 3221 1136799999999999999999


Q ss_pred             CCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH
Q 017901          106 SVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (364)
                      ++++|++||||++....                       ...+|+|+||+++|.+.++++|+++++++||++. ++.||
T Consensus        79 ~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta  157 (348)
T 2d8a_A           79 GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNA  157 (348)
T ss_dssp             TCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHH
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHH
Confidence            99999999999986321                       1246999999999999999999999999998875 77899


Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G  236 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g  236 (364)
                      |+++ +.+++ +|++|+|+|+ |++|++++|+|+..|+ +|+++.+++++ +.++++|+++++++++.++.+.+.    +
T Consensus       158 ~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g  234 (348)
T 2d8a_A          158 VDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDG  234 (348)
T ss_dssp             HHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTT
T ss_pred             HHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCC
Confidence            9999 77889 9999999997 9999999999999999 99999877665 788999999999988777666554    1


Q ss_pred             -CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh-hhhhccceeEEEEEeccC
Q 017901          237 -KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM-QTWYSYGIDYSYIYMRAD  314 (364)
Q Consensus       237 -~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  314 (364)
                       ++|++|||+|+...+..++++++++|+++.+|....            +.      .++. ..++.+++++.+++....
T Consensus       235 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------------~~------~~~~~~~~~~~~~~i~g~~~~~~  296 (348)
T 2d8a_A          235 NGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG------------KV------TIDFNNLIIFKALTIYGITGRHL  296 (348)
T ss_dssp             SCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------------CC------CCCHHHHTTTTTCEEEECCCCCS
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------------Cc------ccCchHHHHhCCcEEEEecCCCc
Confidence             399999999996689999999999999999986511            11      0111 245678899988765423


Q ss_pred             HHHHHHHHHHHHcCCc--eeccceeec-cccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          315 AEGLEEIRRLSETGKL--KIPVDKTFH-MTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       315 ~~~~~~~~~~~~~g~i--~~~~~~~~~-l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      .++++++++++++|++  ++.++++|+ |+|+++||+.+.+ +..||+|++++
T Consensus       297 ~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          297 WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             HHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             HHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            7889999999999996  456889999 9999999999977 56799999875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=6.3e-52  Score=380.27  Aligned_cols=312  Identities=19%  Similarity=0.225  Sum_probs=262.3

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.++|+++.++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.  ...+|+++|||++|+|+++|  ++
T Consensus         1 MkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~G--v~   75 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKI--IRHFPMIPGIDFAGTVHASE--DP   75 (324)
T ss_dssp             CEEEEEEESSSSEEEEEE-ECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTC--CCSSSBCCCSEEEEEEEEES--ST
T ss_pred             CceEEEecCCCCceeeEe-ecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCC--CCCCCccccceeEEEEEEeC--CC
Confidence            899999999999889999 99999999999999999999999999999996532  24689999999999999998  57


Q ss_pred             CCCCCCEEEEecC--CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHH--HhcccCCCC-EEEEEcC
Q 017901          109 SLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK--CAARMSEGQ-RLLVLGG  183 (364)
Q Consensus       109 ~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~vli~g~  183 (364)
                      +|++||||++...  ....+|+|+||+++|.+.++++|+++++++||++++.++|||+++.  .+..+++++ +|+|+|+
T Consensus        76 ~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga  155 (324)
T 3nx4_A           76 RFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGA  155 (324)
T ss_dssp             TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESST
T ss_pred             CCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECC
Confidence            8999999998742  1125699999999999999999999999999999999999998875  345566633 4999998


Q ss_pred             CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHHHHHhhccCC
Q 017901          184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      +|++|++++|+|+.+|++|+++++++++ +.++++|+++++|+++.+....+. +++|++|||+|++ .+..++++++++
T Consensus       156 ~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~  234 (324)
T 3nx4_A          156 SGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYG  234 (324)
T ss_dssp             TSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEE
T ss_pred             CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcH-HHHHHHHHHhcC
Confidence            8999999999999999999999876554 889999999999987654322222 3499999999998 999999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-C----HHHHHHHHHHHHcCCceeccce
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-D----AEGLEEIRRLSETGKLKIPVDK  336 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~g~i~~~~~~  336 (364)
                      |+++.+|....           ...      +.+...++.+++++.+++... .    .+.++.+++++++|++++. ++
T Consensus       235 G~iv~~G~~~~-----------~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~  296 (324)
T 3nx4_A          235 GCVAACGLAGG-----------FAL------PTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-AT  296 (324)
T ss_dssp             EEEEECCCTTC-----------SEE------EEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EE
T ss_pred             CEEEEEecCCC-----------CCC------CCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-ce
Confidence            99999987511           000      011113567889999876422 1    3568889999999999987 99


Q ss_pred             eeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          337 TFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +|+|+|+++||+.+.+++..||+|++++
T Consensus       297 ~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          297 EITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             EEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             eEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            9999999999999999999999999975

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=3.3e-50  Score=375.83  Aligned_cols=313  Identities=19%  Similarity=0.264  Sum_probs=261.0

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      .|++|||+++.+++.+  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+.    .+|+++|||++|+|+++|
T Consensus         5 ~~~~mkA~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~----~~P~v~GhE~~G~V~~vG   77 (374)
T 2jhf_A            5 KVIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT----PLPVIAGHEAAGIVESIG   77 (374)
T ss_dssp             SCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC----CSSBCCCCSEEEEEEEEC
T ss_pred             CceeEEEEEEecCCCc--eEEE-EccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC----CCCcccCcCceEEEEEEC
Confidence            4678999999987755  7888 99999999999999999999999999999986431    379999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCC-------------------------C-------------------CCCCcceeEEeecCCcc
Q 017901          105 ASVRSLTVGQEVFGALHP-------------------------T-------------------AVRGTYADYAVLSEDEL  140 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~-------------------------~-------------------~~~g~~~~~~~~~~~~~  140 (364)
                      +++++|++||||+.....                         +                   ...|+|+||+++|.+.+
T Consensus        78 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  157 (374)
T 2jhf_A           78 EGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISV  157 (374)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHe
Confidence            999999999999976310                         0                   02489999999999999


Q ss_pred             ccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHHcC
Q 017901          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAG  218 (364)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~~g  218 (364)
                      +++|+++++++||++++++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.++++ .+.++++|
T Consensus       158 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG  236 (374)
T 2jhf_A          158 AKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG  236 (374)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC
Confidence            999999999999999999999999987889999999999999 69999999999999999 8999976655 48889999


Q ss_pred             CceeeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHH
Q 017901          219 AEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVL  291 (364)
Q Consensus       219 ~~~v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (364)
                      +++++|+++  .++.+.+.    +++|+||||+|++..+..++++++++ |+++.+|....          +.+.     
T Consensus       237 a~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----------~~~~-----  301 (374)
T 2jhf_A          237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----------SQNL-----  301 (374)
T ss_dssp             CSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----------TCCE-----
T ss_pred             CceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCC----------CCcc-----
Confidence            999998864  34555443    34999999999866899999999999 99999986511          0000     


Q ss_pred             HHHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          292 LKKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                       .++...++.++ ++.+++...  ..++++++++++++|++++  .++++|+|+|+++||+.+.+++. +|+|++|
T Consensus       302 -~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          302 -SMNPMLLLSGR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             -EECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             -ccCHHHHhcCC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence             00111234456 777775431  2578999999999999874  58899999999999999988875 7999975

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-50  Score=376.47  Aligned_cols=313  Identities=20%  Similarity=0.255  Sum_probs=261.6

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhh-hhccCCccccCCCCCcccccceeEEEEe
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTR-MRSGYGRSIFEPLLPLILGRDISGEVAA  102 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (364)
                      ..|++|||+++.+++++  ++++ +.|.|+|+++||+|||.++|||++|++ .+.|..+    ..+|+++|||++|+|++
T Consensus         4 ~~~~~mka~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~P~v~GhE~~G~V~~   76 (374)
T 1cdo_A            4 GKVIKCKAAVAWEANKP--LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK----DGFPVVLGHEGAGIVES   76 (374)
T ss_dssp             TSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT----TSCSEECCCCEEEEEEE
T ss_pred             CCcceeEEEEEecCCCC--eEEE-EeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC----CCCCcccCccceEEEEE
Confidence            35678999999987755  7888 999999999999999999999999999 8988643    36799999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCC-------------------------CC-------------------CCCcceeEEeecCC
Q 017901          103 VGASVRSLTVGQEVFGALHP-------------------------TA-------------------VRGTYADYAVLSED  138 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~~~-------------------------~~-------------------~~g~~~~~~~~~~~  138 (364)
                      +|+++++|++||||+.....                         +.                   ..|+|+||+++|.+
T Consensus        77 vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  156 (374)
T 1cdo_A           77 VGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQI  156 (374)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGG
T ss_pred             ECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchh
Confidence            99999999999999986320                         00                   14899999999999


Q ss_pred             ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHH
Q 017901          139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA  216 (364)
Q Consensus       139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~  216 (364)
                      .++++|+++++++||++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|+++.++++ .+.+++
T Consensus       157 ~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~  235 (374)
T 1cdo_A          157 AVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV  235 (374)
T ss_dssp             GEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred             heEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence            99999999999999999999999999987889999999999999 69999999999999999 8999976655 488999


Q ss_pred             cCCceeeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhH
Q 017901          217 AGAEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATT  289 (364)
Q Consensus       217 ~g~~~v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (364)
                      +|+++++++++  .++.+.++    +++|++|||+|++..+..++++++++ |+++.+|....           .+..  
T Consensus       236 lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-----------~~~~--  302 (374)
T 1cdo_A          236 FGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-----------HDVA--  302 (374)
T ss_dssp             TTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-----------SCEE--
T ss_pred             hCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCC-----------CCcc--
Confidence            99999998864  34555443    34999999999866899999999999 99999986511           0100  


Q ss_pred             HHHHHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          290 VLLKKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                          ++...+..++ ++.+++...  ..++++++++++++|++++  .++++|+|+|+++||+.+.+++. +|+|++|
T Consensus       303 ----~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          303 ----TRPIQLIAGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             ----ECHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             ----cCHHHHhcCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence                0111234455 777765431  2578999999999999884  68899999999999999988875 7999976

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.1e-50  Score=378.25  Aligned_cols=322  Identities=25%  Similarity=0.351  Sum_probs=257.8

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      +||++|||+++.+++   .++++.+.|.|+|+++||+|||.++|||++|++.+.|..      .+|+++|||++|+|+++
T Consensus         7 ~~p~~mkA~v~~~~~---~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~------~~p~v~G~e~~G~V~~v   77 (371)
T 3gqv_A            7 IPPPQQTALTVNDHD---EVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA------TPWAFLGTDYAGTVVAV   77 (371)
T ss_dssp             CCCSCEEEEEECTTS---CEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----C------CTTSCCCSEEEEEEEEE
T ss_pred             CCchhceeEEEcCCC---ceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcCC------CCCccCccccEEEEEEe
Confidence            488999999999654   477744788999999999999999999999999987731      46899999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCC----CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHh-ccc------
Q 017901          104 GASVRSLTVGQEVFGALHPT----AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA-ARM------  172 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~-~~~------  172 (364)
                      |+++++|++||||++.....    ..+|+|+||++++.+.++++|+++++++||+++++++|||+++.+. .++      
T Consensus        78 G~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~  157 (371)
T 3gqv_A           78 GSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSAD  157 (371)
T ss_dssp             CTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCS
T ss_pred             CCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccc
Confidence            99999999999999876421    2469999999999999999999999999999999999999999776 553      


Q ss_pred             -----CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----CCccEEEE
Q 017901          173 -----SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLD  243 (364)
Q Consensus       173 -----~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid  243 (364)
                           ++|++|+|+|++|++|++++|+|+..|++|+++++++++++++++|+++++|+++.++.+.++    +++|++||
T Consensus       158 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d  237 (371)
T 3gqv_A          158 QPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALD  237 (371)
T ss_dssp             SCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred             cccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEE
Confidence                 899999999988999999999999999999999876667899999999999999888777665    45999999


Q ss_pred             CCCCchhHHHHHhhc-cCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-CH------
Q 017901          244 TIGAPETERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-DA------  315 (364)
Q Consensus       244 ~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------  315 (364)
                      |+|++..+..+++++ +++|+++.+|......    ......+...     .....++.+++++.+++... ..      
T Consensus       238 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~----~~~~~~~~~~-----~~~~~~~~k~~~~~g~~~~~~~~~~~~~~  308 (371)
T 3gqv_A          238 CITNVESTTFCFAAIGRAGGHYVSLNPFPEHA----ATRKMVTTDW-----TLGPTIFGEGSTWPAPYGRPGSEEERQFG  308 (371)
T ss_dssp             SSCSHHHHHHHHHHSCTTCEEEEESSCCCC-------CCSCEEEEE-----CCGGGGGTSCBSCSTTTCBCCCHHHHHHH
T ss_pred             CCCchHHHHHHHHHhhcCCCEEEEEecCcccc----ccccccceee-----eeeeeeccccccccccccccccHHHHHHH
Confidence            999976899999999 5999999998641100    0000000000     00013556777777654321 22      


Q ss_pred             -HHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCC-eEEEEc
Q 017901          316 -EGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPG-KVVLEF  363 (364)
Q Consensus       316 -~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~g-kvvi~~  363 (364)
                       +.+.++++++++|++++.  +++.|+|+++++||+.+.+++..| |+|+++
T Consensus       309 ~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~  360 (371)
T 3gqv_A          309 EDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRL  360 (371)
T ss_dssp             HHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEE
T ss_pred             HHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEe
Confidence             234588899999999975  566699999999999999999888 566554

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=4.5e-51  Score=377.30  Aligned_cols=310  Identities=23%  Similarity=0.237  Sum_probs=261.0

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++.+  ++++ +.|.|+|++|||+|||.++|||++|++.+.|..+......+|+++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVR   77 (343)
T ss_dssp             CEEEEECSSSSS--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CeEEEEeCCCCc--EEEE-eccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCC
Confidence            799999988765  8899 9999999999999999999999999999998643101236799999999999999999999


Q ss_pred             CCCCCCEEEEecC-----------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      +|++||||+....                       ....+|+|+||++++.+.++++|+++++++||++ .++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~  156 (343)
T 2dq4_A           78 RPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHT  156 (343)
T ss_dssp             SSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHH
Confidence            9999999998531                       1124699999999999999999999999999887 467799999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCcc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFD  239 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D  239 (364)
                      +.+.+++ +|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++ +.++++ +++++++++.++.+.++    +++|
T Consensus       157 l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D  233 (343)
T 2dq4_A          157 VYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVE  233 (343)
T ss_dssp             HHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEE
T ss_pred             HHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCC
Confidence            9547889 9999999997 9999999999999999 99999887654 778888 99999988776666554    2399


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh-hhhhccceeEEEEEeccCHHHH
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM-QTWYSYGIDYSYIYMRADAEGL  318 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  318 (364)
                      ++|||+|+...+..++++++++|+++.+|....            +.      .++. ..++.+++++.+++.....+++
T Consensus       234 ~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------------~~------~~~~~~~~~~~~~~i~g~~~~~~~~~~  295 (343)
T 2dq4_A          234 VLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------------PI------RFDLAGELVMRGITAFGIAGRRLWQTW  295 (343)
T ss_dssp             EEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------------CE------EECHHHHTGGGTCEEEECCSCCTTHHH
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------------Cc------eeCcHHHHHhCceEEEEeecCCCHHHH
Confidence            999999996589999999999999999986511            11      0111 2456788999988654346789


Q ss_pred             HHHHHHHHcCCc--eeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          319 EEIRRLSETGKL--KIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       319 ~~~~~~~~~g~i--~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +++++++++|++  ++.++++|+|+|+++||+.+.+++. ||+|++++
T Consensus       296 ~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          296 MQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             HHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             HHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            999999999995  5678899999999999999998887 99999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-50  Score=378.13  Aligned_cols=317  Identities=21%  Similarity=0.281  Sum_probs=265.8

Q ss_pred             ceecccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEE
Q 017901           20 FVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGE   99 (364)
Q Consensus        20 ~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   99 (364)
                      +..+.|..+||++++.+++  +.++++ +.|.|+|+++||+|||.++|||++|++.+.|..+   ...+|+++|||++|+
T Consensus         9 ~~~~~~~~~mka~~~~~~g--~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~~P~v~GhE~~G~   82 (380)
T 1vj0_A            9 HHHHMMGLKAHAMVLEKFN--QPLVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGHEGAGR   82 (380)
T ss_dssp             -----CCEEEEEEEBCSTT--SCCEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEE
T ss_pred             hhhhHhhhheEEEEEecCC--CCeEEE-EccCCCCCCCEEEEEEeEEeecccchHHhcCCCC---CCCCCcccCcCcEEE
Confidence            4566788899999999877  358899 9999999999999999999999999999998543   235799999999999


Q ss_pred             EEeecCCCC------CCCCCCEEEEecC-----------------------CC---------CCCCcceeEEee-cCCcc
Q 017901          100 VAAVGASVR------SLTVGQEVFGALH-----------------------PT---------AVRGTYADYAVL-SEDEL  140 (364)
Q Consensus       100 V~~vG~~~~------~~~~Gd~V~~~~~-----------------------~~---------~~~g~~~~~~~~-~~~~~  140 (364)
                      |+++| +++      +|++||||++...                       .+         ..+|+|+||+++ |.+.+
T Consensus        83 V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~  161 (380)
T 1vj0_A           83 VVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDV  161 (380)
T ss_dssp             EEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCE
T ss_pred             EEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceE
Confidence            99999 999      9999999998521                       01         236999999999 99999


Q ss_pred             ccCCCCCChh-hhccccchHHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHH
Q 017901          141 TPKPVSVTHA-DASAIPFAALTAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLA  216 (364)
Q Consensus       141 ~~ip~~~~~~-~aa~~~~~~~ta~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~  216 (364)
                      +++|++++++ +|+.+. ++.|||+++ +.++ +++|++|||+| +|++|++++|+|+.+| ++|+++++++++ +.+++
T Consensus       162 ~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~  238 (380)
T 1vj0_A          162 LKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE  238 (380)
T ss_dssp             EEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred             EECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence            9999999999 666655 899999999 6788 99999999999 8999999999999999 599999877665 88899


Q ss_pred             cCCceeeeCC---ChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhh
Q 017901          217 AGAEQAVDYS---SKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (364)
Q Consensus       217 ~g~~~v~~~~---~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (364)
                      +|++++++++   +.++.+.++    + ++|+||||+|++..+..++++++++|+++.+|....          +.+.  
T Consensus       239 lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----------~~~~--  306 (380)
T 1vj0_A          239 IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP----------QDPV--  306 (380)
T ss_dssp             TTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSC----------CCCE--
T ss_pred             cCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC----------CCCe--
Confidence            9999999987   666665553    2 399999999986689999999999999999987510          0010  


Q ss_pred             HHHHHHhhhh-hhccceeEEEEEeccCHHHHHHHHHHHHc--CCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          289 TVLLKKRMQT-WYSYGIDYSYIYMRADAEGLEEIRRLSET--GKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       289 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                          .++... ++.+++++.+++.. +.++++++++++++  |++++.++++|+|+|+++||+.+.+++.. |+|++++
T Consensus       307 ----~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          307 ----PFKVYEWLVLKNATFKGIWVS-DTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             ----EECHHHHTTTTTCEEEECCCC-CHHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             ----eEchHHHHHhCCeEEEEeecC-CHHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence                011113 56788999998765 57889999999999  99988899999999999999999998887 9999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=6.9e-51  Score=376.18  Aligned_cols=308  Identities=21%  Similarity=0.297  Sum_probs=243.0

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +|||+++.+++++  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+. ....+|.++|||++|+|+++|++ 
T Consensus         3 ~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~E~~G~V~~vG~~-   77 (344)
T 2h6e_A            3 KSKAALLKKFSEP--LSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRLPIILGHENAGTIVEVGEL-   77 (344)
T ss_dssp             EEEBCEECSCCC--------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCC-TTCCSSEECCCCEEEEEEEECTT-
T ss_pred             eeEEEEEecCCCC--CeEE-EeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcc-cCCCCCccccccceEEEEEECCC-
Confidence            6999999987644  8888 99999999999999999999999999999986431 12367999999999999999999 


Q ss_pred             CCCCCCCEEEEecCC-----------------------CCCCCcceeEEeec-CCccccCCCCCChhhhccccchHHHHH
Q 017901          108 RSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLS-EDELTPKPVSVTHADASAIPFAALTAW  163 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~~ta~  163 (364)
                      ++|++||||+.....                       ...+|+|+||+++| .+.++++ +++++++||.++++++|||
T Consensus        78 ~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~  156 (344)
T 2h6e_A           78 AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSM  156 (344)
T ss_dssp             CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHH
T ss_pred             CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHH
Confidence            999999999775321                       02469999999999 9999999 9999999999999999999


Q ss_pred             HHHHHh----cccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc
Q 017901          164 RALKCA----ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK  235 (364)
Q Consensus       164 ~~l~~~----~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~  235 (364)
                      +++.+.    +++ +|++|+|+|+ |++|++++|+|+.+  |++|+++++++++ +.++++|+++++++++ .++...+.
T Consensus       157 ~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~  234 (344)
T 2h6e_A          157 GAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT  234 (344)
T ss_dssp             HHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH
T ss_pred             HHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh
Confidence            999654    288 9999999996 99999999999999  9999999876654 8889999999998876 55555554


Q ss_pred             -C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          236 -G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       236 -g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                       + ++|+||||+|++..+..++++++++|+++.+|....            +.      .++...++.+++++.+++.. 
T Consensus       235 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------------~~------~~~~~~~~~~~~~i~g~~~~-  295 (344)
T 2h6e_A          235 DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK------------RV------SLEAFDTAVWNKKLLGSNYG-  295 (344)
T ss_dssp             TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------------CC------CCCHHHHHHTTCEEEECCSC-
T ss_pred             cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCC------------Cc------ccCHHHHhhCCcEEEEEecC-
Confidence             2 399999999997789999999999999999987511            10      01111356678899887754 


Q ss_pred             CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +.++++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus       296 ~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          296 SLNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             CHHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             CHHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            578899999999999999988 9999999999999999988889999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=3.9e-51  Score=391.22  Aligned_cols=322  Identities=23%  Similarity=0.302  Sum_probs=266.4

Q ss_pred             ecccccceeeEEecccC-------------CCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCC--------
Q 017901           22 RFLVTTSCRAVVLPRFG-------------GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG--------   80 (364)
Q Consensus        22 ~~~~~~~~~a~~~~~~g-------------~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~--------   80 (364)
                      ...+|.+|||+++.+++             ..+.++++ +.|.|+|+++||+|||.++|||++|++...+..        
T Consensus        24 ~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~  102 (456)
T 3krt_A           24 ALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLD-DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE  102 (456)
T ss_dssp             HSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHH
T ss_pred             cCCCCcceEEEEEeccccccccccccccCCCCCCcEEE-EccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhh
Confidence            44689999999999762             23678999 999999999999999999999999997654321        


Q ss_pred             -----cc-ccCCCCC-cccccceeEEEEeecCCCCCCCCCCEEEEecCC-----------------------CCCCCcce
Q 017901           81 -----RS-IFEPLLP-LILGRDISGEVAAVGASVRSLTVGQEVFGALHP-----------------------TAVRGTYA  130 (364)
Q Consensus        81 -----~~-~~~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~-----------------------~~~~g~~~  130 (364)
                           .. .....+| .++|||++|+|+++|+++++|++||+|++....                       ...+|+|+
T Consensus       103 ~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~a  182 (456)
T 3krt_A          103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLA  182 (456)
T ss_dssp             HHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSB
T ss_pred             hccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCccc
Confidence                 00 0112467 699999999999999999999999999985311                       01259999


Q ss_pred             eEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHh--cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          131 DYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA--ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       131 ~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      ||++++.++++++|+++++++||+++++++|||+++...  +++++|++|+|+|++|++|++++|+|+..|++|++++++
T Consensus       183 ey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~  262 (456)
T 3krt_A          183 EIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSS  262 (456)
T ss_dssp             SEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC
Confidence            999999999999999999999999999999999998644  789999999999988999999999999999999999776


Q ss_pred             ccH-HHHHHcCCceeeeCCChhH-----------------HHHhc----C-CccEEEECCCCchhHHHHHhhccCCCEEE
Q 017901          209 KSI-DRVLAAGAEQAVDYSSKDI-----------------ELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYM  265 (364)
Q Consensus       209 ~~~-~~~~~~g~~~v~~~~~~~~-----------------~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v  265 (364)
                      +++ +.++++|++.++++.+.++                 .+.++    | ++|+||||+|+. .+..++++++++|+++
T Consensus       263 ~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv  341 (456)
T 3krt_A          263 PQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE-TFGASVFVTRKGGTIT  341 (456)
T ss_dssp             HHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHH-HHHHHHHHEEEEEEEE
T ss_pred             HHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCch-hHHHHHHHhhCCcEEE
Confidence            655 8899999999999876432                 23332    1 399999999995 9999999999999999


Q ss_pred             EEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHH
Q 017901          266 TLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVRE  345 (364)
Q Consensus       266 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~e  345 (364)
                      .+|....           ....      ++...++.+++++.+++.. +.+++.++++++++|++++.++++|+|+|+++
T Consensus       342 ~~G~~~~-----------~~~~------~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~e  403 (456)
T 3krt_A          342 TCASTSG-----------YMHE------YDNRYLWMSLKRIIGSHFA-NYREAWEANRLIAKGRIHPTLSKVYSLEDTGQ  403 (456)
T ss_dssp             ESCCTTC-----------SEEE------EEHHHHHHTTCEEEECCSC-CHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHH
T ss_pred             EEecCCC-----------cccc------cCHHHHHhcCeEEEEeccC-CHHHHHHHHHHHHcCCcccceeEEEcHHHHHH
Confidence            9986511           0110      1111355677788888764 56777889999999999999999999999999


Q ss_pred             HHHHHhcCCCCCeEEEEc
Q 017901          346 AHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       346 A~~~~~~~~~~gkvvi~~  363 (364)
                      ||+.+.+++..||+|+.+
T Consensus       404 A~~~l~~~~~~GKvvv~~  421 (456)
T 3krt_A          404 AAYDVHRNLHQGKVGVLC  421 (456)
T ss_dssp             HHHHHHTTCSSSEEEEES
T ss_pred             HHHHHHhCCCCCcEEEEe
Confidence            999999999999999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-50  Score=371.86  Aligned_cols=311  Identities=25%  Similarity=0.381  Sum_probs=260.8

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +|||+++.++|.++.++++ +.|.|+|+++||+|||.++|||++|++.+.|.++   ...+|+++|||++|+|+++|+++
T Consensus         1 ~Mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v   76 (327)
T 1qor_A            1 MATRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGV   76 (327)
T ss_dssp             -CEEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTC
T ss_pred             CcEEEEEcCCCChhheEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---CCCCCCCCCceeEEEEEEECCCC
Confidence            3899999999888889999 9999999999999999999999999999998642   23579999999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~  187 (364)
                      ++|++|||| +...  ..+|+|+||+++|.+.++++|+++++++||+++++++|||+++.+.+++++|++|+|+||+|++
T Consensus        77 ~~~~~GdrV-~~~g--~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggi  153 (327)
T 1qor_A           77 KHIKAGDRV-VYAQ--SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGV  153 (327)
T ss_dssp             CSCCTTCEE-EESC--CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHH
T ss_pred             CCCCCCCEE-EECC--CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHH
Confidence            999999999 4330  1259999999999999999999999999999999999999999778899999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCC
Q 017901          188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (364)
Q Consensus       188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~  261 (364)
                      |++++|+++..|++|+++.+++++ +.++++|++.++++++.++.+.+.     +++|++|||+|.. .+..++++++++
T Consensus       154 G~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~  232 (327)
T 1qor_A          154 GLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRR  232 (327)
T ss_dssp             HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEE
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhcCC
Confidence            999999999999999999887655 778889999999987766655543     2399999999955 999999999999


Q ss_pred             CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcc-ceeEEEEEe----cc---CHHHHHHHHHHHHcCCceec
Q 017901          262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY-GIDYSYIYM----RA---DAEGLEEIRRLSETGKLKIP  333 (364)
Q Consensus       262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~---~~~~~~~~~~~~~~g~i~~~  333 (364)
                      |+++.+|....           ... .     ++...++.+ ++.+.+...    ..   ..+.++++++++++|++++.
T Consensus       233 G~iv~~g~~~~-----------~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  295 (327)
T 1qor_A          233 GLMVSFGNSSG-----------AVT-G-----VNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVD  295 (327)
T ss_dssp             EEEEECCCTTC-----------CCC-C-----BCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CEEEEEecCCC-----------CCC-c-----cCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccc
Confidence            99999986511           000 0     000122333 555543321    10   14568899999999999998


Q ss_pred             cc--eeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          334 VD--KTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       334 ~~--~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++  ++|+|+|+++||+.+.+++..||+|+++
T Consensus       296 i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          296 VAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             CCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             cccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            88  9999999999999999988889999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=9.9e-50  Score=370.59  Aligned_cols=323  Identities=23%  Similarity=0.335  Sum_probs=266.9

Q ss_pred             cccccceeeEEecccCCC--ceEEE-cccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEE
Q 017901           23 FLVTTSCRAVVLPRFGGP--EVLEV-RPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGE   99 (364)
Q Consensus        23 ~~~~~~~~a~~~~~~g~~--~~~~~-~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   99 (364)
                      ..++.+|||+++.+++++  +.+++ + +.|.|+|++|||+|||.++|||++|++.+.|.++.  ...+|+++|||++|+
T Consensus        18 ~~~~~~MkA~~~~~~g~~~~~~l~~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~i~G~E~~G~   94 (362)
T 2c0c_A           18 LYFQSMMQKLVVTRLSPNFREAVTLSR-DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP--SVKPPFDIGFEGIGE   94 (362)
T ss_dssp             HHHCCEEEEEEECSCCSSHHHHEEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT--TCCSCEECCSEEEEE
T ss_pred             ccchhhceEEEEeecCCCccceeEEEe-ecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC--CCCCCCCCCceeEEE
Confidence            346788999999988764  57899 8 99999999999999999999999999999986432  236799999999999


Q ss_pred             EEeecCCCC-CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEE
Q 017901          100 VAAVGASVR-SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRL  178 (364)
Q Consensus       100 V~~vG~~~~-~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~v  178 (364)
                      |+++|++++ +|++||||++...     |+|+||++++.+.++++|+. + .++|+++.+++|||+++.+.+++++|++|
T Consensus        95 V~~vG~~V~~~~~vGdrV~~~~~-----G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~V  167 (362)
T 2c0c_A           95 VVALGLSASARYTVGQAVAYMAP-----GSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKV  167 (362)
T ss_dssp             EEEECTTGGGTCCTTCEEEEECS-----CCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEE
T ss_pred             EEEECCCccCCCCCCCEEEEccC-----CcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEE
Confidence            999999999 9999999999864     99999999999999999996 3 46778888999999999888899999999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHH
Q 017901          179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERL  253 (364)
Q Consensus       179 li~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~  253 (364)
                      +|+||+|++|++++|+|+..|++|+++++++++ +.++++|++.++++++.++.+.++    +++|++|||+|+. .+..
T Consensus       168 lV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~  246 (362)
T 2c0c_A          168 LVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGA-MFDL  246 (362)
T ss_dssp             EETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTH-HHHH
T ss_pred             EEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHH-HHHH
Confidence            999999999999999999999999999887654 888999999999988776665553    2399999999996 8999


Q ss_pred             HHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHHHHHHHHHcCC
Q 017901          254 GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLEEIRRLSETGK  329 (364)
Q Consensus       254 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~  329 (364)
                      ++++++++|+++.+|........ ...... ....+.      ..++.+++++.+++...    ..+.++++++++++|+
T Consensus       247 ~~~~l~~~G~iv~~g~~~~~~~~-~~~~~~-~~~~~~------~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~  318 (362)
T 2c0c_A          247 AVDALATKGRLIVIGFISGYQTP-TGLSPV-KAGTLP------AKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGD  318 (362)
T ss_dssp             HHHHEEEEEEEEECCCGGGTTSS-SCCCCC-CCTTHH------HHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTC
T ss_pred             HHHHHhcCCEEEEEeCCCCcCcc-cccccc-cccccH------HHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCC
Confidence            99999999999999875210000 000000 000010      13566788888876532    2567899999999999


Q ss_pred             ceecc--------ceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          330 LKIPV--------DKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       330 i~~~~--------~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +++.+        ++.|+|+++++||+.+.+++..||+|++++
T Consensus       319 l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  361 (362)
T 2c0c_A          319 LVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP  361 (362)
T ss_dssp             SCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred             eEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence            98754        367899999999999999888899999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.5e-50  Score=373.09  Aligned_cols=310  Identities=21%  Similarity=0.244  Sum_probs=257.3

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ++|||+++.++   +.++++ +.|.|+|+++||+|||.++|||++|++.+.|.........+|+++|||++|+|+++|++
T Consensus         6 ~~mka~~~~~~---~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   81 (356)
T 1pl8_A            6 PNNLSLVVHGP---GDLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSS   81 (356)
T ss_dssp             CCCEEEEEEET---TEEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTT
T ss_pred             cCceEEEEecC---CcEEEE-EccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCC
Confidence            46999999964   468999 99999999999999999999999999998853111112357999999999999999999


Q ss_pred             CCCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH
Q 017901          107 VRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (364)
                      +++|++||||++....                        ...+|+|+||+++|.+.++++|+++++++||.+ .++.||
T Consensus        82 V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta  160 (356)
T 1pl8_A           82 VKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVG  160 (356)
T ss_dssp             CCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHH
T ss_pred             CCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHH
Confidence            9999999999975310                        013699999999999999999999999998865 577899


Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCC---ChhHHHHhc--
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYS---SKDIELAIK--  235 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~---~~~~~~~i~--  235 (364)
                      |+++ +.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ ++++++|++++++++   ..++.+.+.  
T Consensus       161 ~~al-~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~  238 (356)
T 1pl8_A          161 IHAC-RRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ  238 (356)
T ss_dssp             HHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHH
T ss_pred             HHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHH
Confidence            9999 788999999999999 59999999999999999 89999877665 889999999999987   355555443  


Q ss_pred             --CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       236 --g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                        +++|+||||+|++..+..++++|+++|+++.+|....            +.      .++...++.+++++.+++.. 
T Consensus       239 ~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~i~g~~~~-  299 (356)
T 1pl8_A          239 LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------------MT------TVPLLHAAIREVDIKGVFRY-  299 (356)
T ss_dssp             HTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------------CC------CCCHHHHHHTTCEEEECCSC-
T ss_pred             hCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------------CC------ccCHHHHHhcceEEEEeccc-
Confidence              2399999999997678999999999999999986410            10      01112456778888887643 


Q ss_pred             CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          314 DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                       .++++++++++++|+++  +.++++|+|+|+++||+.+.++ ..||+|++++
T Consensus       300 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~  350 (356)
T 1pl8_A          300 -CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCD  350 (356)
T ss_dssp             -SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECC
T ss_pred             -HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCC
Confidence             45688999999999975  5688999999999999999988 7799999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=9e-50  Score=371.41  Aligned_cols=310  Identities=19%  Similarity=0.218  Sum_probs=259.7

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      +|++..+..++.++.+++. ++|.|+|++|||+|||.++|||++|++.+.|..+   ...+|+++|||++|+|+++|+++
T Consensus        14 ~mk~~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~V   89 (366)
T 1yqd_A           14 PVKAFGWAARDQSGHLSPF-NFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWG---FSMYPLVPGHEIVGEVTEVGSKV   89 (366)
T ss_dssp             SEEEEEEEECSTTCCEEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSS---CCCSSBCCCCCEEEEEEEECTTC
T ss_pred             CeeEEEEEEcCCCCCcEEE-EccCCCCCCCeEEEEEEEEeechhhHHHHcCCCC---CCCCCEecccceEEEEEEECCCC
Confidence            4666666655666779999 9999999999999999999999999999988543   23579999999999999999999


Q ss_pred             CCCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901          108 RSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (364)
                      ++|++||||+....                               ....+|+|+||+++|.+.++++|+++++++||+++
T Consensus        90 ~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~  169 (366)
T 1yqd_A           90 KKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLL  169 (366)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGG
T ss_pred             CcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhh
Confidence            99999999985210                               00146999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhcccC-CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceeeeCCChhHHHH
Q 017901          157 FAALTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       157 ~~~~ta~~~l~~~~~~~-~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~~~~~~~~~~~  233 (364)
                      +++.|||+++. ...++ +|++|+|+| +|++|++++|+|+.+|++|+++++++++ +.+. ++|+++++++++.+....
T Consensus       170 ~~~~ta~~al~-~~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~  247 (366)
T 1yqd_A          170 CAGITVYSPLK-YFGLDEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQA  247 (366)
T ss_dssp             THHHHHHHHHH-HTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHH
T ss_pred             hhHHHHHHHHH-hcCcCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHH
Confidence            99999999984 56788 999999999 5999999999999999999999876654 6655 999999999887654444


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA  313 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                      +.+++|+||||+|+...+..++++++++|+++.+|....            +..      ++...++.+++++.+++.. 
T Consensus       248 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------------~~~------~~~~~~~~~~~~i~g~~~~-  308 (366)
T 1yqd_A          248 AAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK------------PLE------LPAFSLIAGRKIVAGSGIG-  308 (366)
T ss_dssp             TTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS------------CEE------ECHHHHHTTTCEEEECCSC-
T ss_pred             hhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC------------CCC------cCHHHHHhCCcEEEEecCC-
Confidence            443499999999987578899999999999999987511            110      1111356788899887754 


Q ss_pred             CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ..+++.++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus       309 ~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          309 GMKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECH
T ss_pred             CHHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEc
Confidence            577899999999999998876 6999999999999999998889999975

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1e-50  Score=387.77  Aligned_cols=321  Identities=25%  Similarity=0.277  Sum_probs=264.3

Q ss_pred             cccccceeeEEecccC-----------CCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhc-------------c
Q 017901           23 FLVTTSCRAVVLPRFG-----------GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS-------------G   78 (364)
Q Consensus        23 ~~~~~~~~a~~~~~~g-----------~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-------------g   78 (364)
                      ..+|++|||+++.+++           ..+.++++ +.|.|+|++|||+|||.++|||++|++...             +
T Consensus        19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             cCCChhheeeeeeccccccccccccCCCCCCceEE-eccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            3689999999999887           12468999 999999999999999999999999986432             1


Q ss_pred             CCcccc-CCCCC-cccccceeEEEEeecCCCCCCCCCCEEEEecCCC-----------------------CCCCcceeEE
Q 017901           79 YGRSIF-EPLLP-LILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AVRGTYADYA  133 (364)
Q Consensus        79 ~~~~~~-~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~  133 (364)
                      ....+. ...+| .++|||++|+|+++|+++++|++||||+......                       ..+|+|+||+
T Consensus        98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~  177 (447)
T 4a0s_A           98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYG  177 (447)
T ss_dssp             TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEE
T ss_pred             ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeee
Confidence            111111 12456 6999999999999999999999999999864210                       1259999999


Q ss_pred             eecCCccccCCCCCChhhhccccchHHHHHHHHHH--hcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          134 VLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       134 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      +++.+.++++|+++++++||+++++++|||+++..  .+++++|++|+|+|++|++|++++|+|+..|++|+++.+++++
T Consensus       178 ~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~  257 (447)
T 4a0s_A          178 VVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQK  257 (447)
T ss_dssp             EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             ecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            99999999999999999999999999999999863  3889999999999988999999999999999999999776665


Q ss_pred             -HHHHHcCCceeeeCCChhH------------------HHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          212 -DRVLAAGAEQAVDYSSKDI------------------ELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       212 -~~~~~~g~~~v~~~~~~~~------------------~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                       +.++++|+++++++.+.++                  .+.+.    +++|++|||+|+. .+..++++++++|+++.+|
T Consensus       258 ~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv~~G  336 (447)
T 4a0s_A          258 EAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TFGLSVIVARRGGTVVTCG  336 (447)
T ss_dssp             HHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HHHHHHHHSCTTCEEEESC
T ss_pred             HHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch-HHHHHHHHHhcCCEEEEEe
Confidence             8889999999988654331                  23332    2399999999997 8999999999999999998


Q ss_pred             cCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHH
Q 017901          269 GETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHE  348 (364)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~  348 (364)
                      ....           ...      .+....++.+++++.+++.. +.+++.++++++++|++++.++++|+|+|+++||+
T Consensus       337 ~~~~-----------~~~------~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~  398 (447)
T 4a0s_A          337 SSSG-----------YLH------TFDNRYLWMKLKKIVGSHGA-NHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACR  398 (447)
T ss_dssp             CTTC-----------SEE------EEEHHHHHHTTCEEEECCSC-CHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHH
T ss_pred             cCCC-----------ccc------ccCHHHHHhCCCEEEecCCC-CHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHH
Confidence            6511           010      01111356677888887754 56788899999999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEc
Q 017901          349 AKDKRLIPGKVVLEF  363 (364)
Q Consensus       349 ~~~~~~~~gkvvi~~  363 (364)
                      .+.+++..||+|+.+
T Consensus       399 ~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          399 VVQTSRQVGKVAVLC  413 (447)
T ss_dssp             HHHTTCCSSEEEEES
T ss_pred             HHhcCCCceEEEEEe
Confidence            999999999999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.2e-49  Score=368.31  Aligned_cols=311  Identities=26%  Similarity=0.346  Sum_probs=263.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc-----ccCCCCCcccccceeEEEEee
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS-----IFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      |||+++.+++++  ++++ +.|.|+|+++||+|||.++|||++|++.+.|..+.     .....+|+++|||++|+|+++
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   77 (347)
T 1jvb_A            1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (347)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEE
Confidence            799999987754  8888 99999999999999999999999999999885321     012367999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecC-CccccCCCCCChhhhccccchH
Q 017901          104 GASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSE-DELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~-~~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      |+++++|++||||+.....                       ...+|+|+||+++|. +.++++ +++++++||.+++++
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~  156 (347)
T 1jvb_A           78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSG  156 (347)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHH
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhH
Confidence            9999999999999765310                       024699999999999 999999 999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh---
Q 017901          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI---  234 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i---  234 (364)
                      .|||+++ +++++++|++|+|+|++|++|++++|+++.. |++|+++.+++++ +.++++|+++++++.+.++.+.+   
T Consensus       157 ~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  235 (347)
T 1jvb_A          157 ITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRI  235 (347)
T ss_dssp             HHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred             HHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHH
Confidence            9999999 4589999999999998779999999999999 9999999876654 77889999999998776653322   


Q ss_pred             c--CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec
Q 017901          235 K--GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR  312 (364)
Q Consensus       235 ~--g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (364)
                      .  +++|++||++|++..+..++++++++|+++.+|....          +...        +...++.+++++.+++..
T Consensus       236 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~----------~~~~--------~~~~~~~~~~~i~g~~~~  297 (347)
T 1jvb_A          236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA----------DLHY--------HAPLITLSEIQFVGSLVG  297 (347)
T ss_dssp             TTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC----------CCCC--------CHHHHHHHTCEEEECCSC
T ss_pred             hcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC----------CCCC--------CHHHHHhCceEEEEEecc
Confidence            2  3499999999997788999999999999999987510          0011        111345678888887754


Q ss_pred             cCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          313 ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       313 ~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                       +.++++++++++++|++++.++++|+|+|+++||+.+.+++..||+|+++
T Consensus       298 -~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          298 -NQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             -CHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             -CHHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence             57889999999999999999999999999999999999999889999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.4e-50  Score=377.12  Aligned_cols=313  Identities=23%  Similarity=0.291  Sum_probs=258.8

Q ss_pred             cceeeEEecccCCC-ceEEEcccccCCCCC--CCeEEEEEeEeecChhhhhhhccCCccccCCCCC---------ccccc
Q 017901           27 TSCRAVVLPRFGGP-EVLEVRPNVEVPDLK--PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP---------LILGR   94 (364)
Q Consensus        27 ~~~~a~~~~~~g~~-~~~~~~~~~~~p~~~--~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p---------~~~G~   94 (364)
                      ++||++++.+++.+ +.++++ +.|.|.|.  +|||+|||.++|||++|++.+.|.++.  ...+|         +++||
T Consensus         2 ~~mka~~~~~~g~~~~~l~~~-~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~~~~~~~p~~i~G~   78 (364)
T 1gu7_A            2 ITAQAVLYTQHGEPKDVLFTQ-SFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS--KPAKTTGFGTTEPAAPCGN   78 (364)
T ss_dssp             EEEEEEEESSCSCHHHHCEEE-EEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC--CCCCBSTTCCSSCBEECCS
T ss_pred             ceEEEEEeccCCCchheeEEe-eccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC--CCCCCccccccCcccccCc
Confidence            57999999988875 458888 88888777  999999999999999999999986532  12355         89999


Q ss_pred             ceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCC-----------CCChhhhccccchHHHHH
Q 017901           95 DISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV-----------SVTHADASAIPFAALTAW  163 (364)
Q Consensus        95 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~-----------~~~~~~aa~~~~~~~ta~  163 (364)
                      |++|+|+++|+++++|++||||++...   .+|+|+||++++.+.++++|+           ++++++||+++++++|||
T Consensus        79 E~~G~V~~vG~~v~~~~vGdrV~~~~~---~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~  155 (364)
T 1gu7_A           79 EGLFEVIKVGSNVSSLEAGDWVIPSHV---NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAY  155 (364)
T ss_dssp             CCEEEEEEECTTCCSCCTTCEEEESSS---CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHH
T ss_pred             eeEEEEEEeCCCCCcCCCCCEEEecCC---CCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHH
Confidence            999999999999999999999998753   359999999999999999998           899999999999999999


Q ss_pred             HHHHHhcccCCC-CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-----HHHHHHcCCceeeeCCC---hhHHHHh
Q 017901          164 RALKCAARMSEG-QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-----IDRVLAAGAEQAVDYSS---KDIELAI  234 (364)
Q Consensus       164 ~~l~~~~~~~~g-~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-----~~~~~~~g~~~v~~~~~---~~~~~~i  234 (364)
                      +++.+.+++++| ++|+|+|++|++|++++|+|+.+|++|++++++.+     ++.++++|+++++++++   .++.+.+
T Consensus       156 ~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i  235 (364)
T 1gu7_A          156 LMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTI  235 (364)
T ss_dssp             HHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHH
T ss_pred             HHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHH
Confidence            999766799999 99999998899999999999999999999975433     36678999999998864   4444433


Q ss_pred             c-------CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEE
Q 017901          235 K-------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYS  307 (364)
Q Consensus       235 ~-------g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (364)
                      +       +++|+||||+|++ ....++++++++|+++.+|....           .+..      ++...++.+++++.
T Consensus       236 ~~~t~~~~~g~Dvvid~~G~~-~~~~~~~~l~~~G~~v~~g~~~~-----------~~~~------~~~~~~~~~~~~~~  297 (364)
T 1gu7_A          236 KEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSF-----------QPVT------IPTSLYIFKNFTSA  297 (364)
T ss_dssp             HHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSS-----------CCEE------ECHHHHHHSCCEEE
T ss_pred             HHHhhccCCCceEEEECCCch-hHHHHHHHhccCCEEEEecCCCC-----------CCcc------cCHHHHhhcCcEEE
Confidence            1       1399999999998 55588999999999999986511           0110      01113456788888


Q ss_pred             EEEecc----C----HHHHHHHHHHHHcCCceeccceeecc---ccHHHHHHHHhcCCCCCeEEEEc
Q 017901          308 YIYMRA----D----AEGLEEIRRLSETGKLKIPVDKTFHM---TQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       308 ~~~~~~----~----~~~~~~~~~~~~~g~i~~~~~~~~~l---~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++...    .    .+.++++++++++|++++.+...|++   +|+++||+.+.+++..||+|+++
T Consensus       298 g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          298 GFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             ECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             EEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            876531    1    35789999999999999876667766   49999999999888889999975

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=9.1e-49  Score=361.02  Aligned_cols=311  Identities=20%  Similarity=0.217  Sum_probs=261.7

Q ss_pred             cceeeEEeccc--C--CCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccc----eeE
Q 017901           27 TSCRAVVLPRF--G--GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRD----ISG   98 (364)
Q Consensus        27 ~~~~a~~~~~~--g--~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e----~~G   98 (364)
                      .+||+|++.++  |  +++.++++ +.|.|+|++|||+|||.++|||++|++.+.+...    ..+|+++|||    ++|
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~----~~~p~~~G~e~g~~~~G   80 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFV-ETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS----YIPPVGIGEVMRALGVG   80 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC----SSCCCCTTSBCCCEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEE-eccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc----cCCCCCCCcccCCceEE
Confidence            57999999862  3  56889999 9999999999999999999999999998877422    2456777777    899


Q ss_pred             EEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhh--ccccchHHHHHHHHHHhcccCCCC
Q 017901           99 EVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADA--SAIPFAALTAWRALKCAARMSEGQ  176 (364)
Q Consensus        99 ~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~g~  176 (364)
                      +|++  +++++|++||||++.       |+|+||+++|.+.++++|+++++.++  ++++++++|||+++.+.+++++|+
T Consensus        81 ~V~~--~~v~~~~vGdrV~~~-------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~  151 (336)
T 4b7c_A           81 KVLV--SKHPGFQAGDYVNGA-------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGE  151 (336)
T ss_dssp             EEEE--ECSTTCCTTCEEEEE-------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTC
T ss_pred             EEEe--cCCCCCCCCCEEecc-------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCC
Confidence            9999  458899999999975       89999999999999999999987776  788999999999998889999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchh
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~  250 (364)
                      +|+|+|++|++|++++|+|+..|++|+++++++++ +.+ +++|+++++|+++.++.+.+.    +++|++|||+|++ .
T Consensus       152 ~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~  230 (336)
T 4b7c_A          152 TVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGE-I  230 (336)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCHH-H
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCcc-h
Confidence            99999988999999999999999999999877665 677 899999999998877766654    2399999999986 9


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC----HHHHHHHHHHHH
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD----AEGLEEIRRLSE  326 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  326 (364)
                      +..++++++++|+++.+|....     +.  ...+    ....++...++.+++++.+++....    .+.+++++++++
T Consensus       231 ~~~~~~~l~~~G~iv~~G~~~~-----~~--~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~  299 (336)
T 4b7c_A          231 LDTVLTRIAFKARIVLCGAISQ-----YN--NKEA----VRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLA  299 (336)
T ss_dssp             HHHHHTTEEEEEEEEECCCGGG-----GC------------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCEEEEEeeccc-----cc--CCcc----cccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHH
Confidence            9999999999999999997521     00  0000    0112223346778999999876421    478899999999


Q ss_pred             cCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          327 TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       327 ~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +|++++.+...|+|+|+++||+.+.+++..||+|+++
T Consensus       300 ~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          300 EGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             TTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999998777899999999999999999999999985

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=2.9e-50  Score=370.14  Aligned_cols=316  Identities=21%  Similarity=0.245  Sum_probs=257.0

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      |+++|||+++.+++++..++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.  ...+|+++|||++|+|+++ 
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~~-   76 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI--VREYPLILGIDAAGTVVSS-   76 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT--CSSCSEECCSEEEEEEEEC-
T ss_pred             CCCcceEEEEecCCCCcceeEe-ecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCC--cCCCCccccceEEEEEEEc-
Confidence            5678999999988766678999 99999999999999999999999999999985431  2357999999999999996 


Q ss_pred             CCCCCCCCCCEEEEecC--CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHH--HhcccCCCC-EEE
Q 017901          105 ASVRSLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK--CAARMSEGQ-RLL  179 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~vl  179 (364)
                       ++++|++||||++...  ....+|+|+||++++.+.++++|+++++++||+++++++|||.++.  .+.++++|+ +|+
T Consensus        77 -~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~Vl  155 (330)
T 1tt7_A           77 -NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVL  155 (330)
T ss_dssp             -SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEE
T ss_pred             -CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEE
Confidence             4678999999998742  1124699999999999999999999999999999999999998764  346788986 999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChh--HHHHhc-CCccEEEECCCCchhHHHHH
Q 017901          180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKD--IELAIK-GKFDAVLDTIGAPETERLGL  255 (364)
Q Consensus       180 i~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~--~~~~i~-g~~D~vid~~g~~~~~~~~~  255 (364)
                      |+|++|++|++++|+|+.+|++|++++++++ ++.++++|+++++|+++.+  ....+. +++|++|||+|++ .+..++
T Consensus       156 V~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~  234 (330)
T 1tt7_A          156 VTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGK-QLASLL  234 (330)
T ss_dssp             EESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTH-HHHHHH
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHH-HHHHHH
Confidence            9998899999999999999999999987655 4888999999999865432  011111 2399999999996 999999


Q ss_pred             hhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec-cC----HHHHHHHHHHHHcCCc
Q 017901          256 NFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR-AD----AEGLEEIRRLSETGKL  330 (364)
Q Consensus       256 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~g~i  330 (364)
                      ++++++|+++.+|....           .+.      ..+...++.+++++.+++.. ..    .+.++.+++++.+|++
T Consensus       235 ~~l~~~G~iv~~G~~~~-----------~~~------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l  297 (330)
T 1tt7_A          235 SKIQYGGSVAVSGLTGG-----------GEV------PATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQL  297 (330)
T ss_dssp             TTEEEEEEEEECCCSSC-----------SCE------EECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCS
T ss_pred             HhhcCCCEEEEEecCCC-----------Ccc------CcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCc
Confidence            99999999999986511           010      01111346678888887431 12    2356667777778999


Q ss_pred             eeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          331 KIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       331 ~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++.++++|+|+|+++||+.+.+++..||+|+++
T Consensus       298 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          298 LTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             ccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            888899999999999999999988889999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=4e-49  Score=371.81  Aligned_cols=297  Identities=19%  Similarity=0.231  Sum_probs=246.4

Q ss_pred             eEEEcccccCCC-CCCCeEEEEEeEeecChhhhhhhccCCcc----ccCCCCCcccccceeEEEEeecCCC------CCC
Q 017901           42 VLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRS----IFEPLLPLILGRDISGEVAAVGASV------RSL  110 (364)
Q Consensus        42 ~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~~vG~~~------~~~  110 (364)
                      .++++ +.|.|+ |++|||+|||.++|||++|++.+.|....    .....+|+++|||++|+|+++|+++      ++|
T Consensus        41 ~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~  119 (404)
T 3ip1_A           41 EVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRF  119 (404)
T ss_dssp             EEEEE-EECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEEC
T ss_pred             ceEEE-EcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCC
Confidence            68999 999999 99999999999999999999999874221    1124689999999999999999999      899


Q ss_pred             CCCCEEEEecC-----------------------CCCCCCcceeEEeecCCccccCCCCCC------hhhhccccchHHH
Q 017901          111 TVGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVT------HADASAIPFAALT  161 (364)
Q Consensus       111 ~~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~------~~~aa~~~~~~~t  161 (364)
                      ++||||+....                       ....+|+|+||++++.+.++++|++++      +.++|+++.++.|
T Consensus       120 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~t  199 (404)
T 3ip1_A          120 EIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSV  199 (404)
T ss_dssp             CTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHH
T ss_pred             CCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEeccccccccccccchhHHhhhhHHHH
Confidence            99999998531                       112479999999999999999999886      4568889999999


Q ss_pred             HHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---
Q 017901          162 AWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---  235 (364)
Q Consensus       162 a~~~l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---  235 (364)
                      ||+++... +++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++ ++++++|+++++++++.++.+.++   
T Consensus       200 a~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t  278 (404)
T 3ip1_A          200 AYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYT  278 (404)
T ss_dssp             HHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHT
T ss_pred             HHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHh
Confidence            99998645 48999999999995 9999999999999999 89999766654 889999999999998877776665   


Q ss_pred             -C-CccEEEECCCCc-hhHHHHHhhc----cCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEE
Q 017901          236 -G-KFDAVLDTIGAP-ETERLGLNFL----KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSY  308 (364)
Q Consensus       236 -g-~~D~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (364)
                       | ++|+||||+|++ ..+..+.++|    +++|+++.+|....            +.      .++...++.+++++.+
T Consensus       279 ~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~i~g  340 (404)
T 3ip1_A          279 NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA------------KI------PLTGEVFQVRRAQIVG  340 (404)
T ss_dssp             TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS------------CE------EECHHHHHHTTCEEEE
T ss_pred             CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC------------CC------cccHHHHhccceEEEE
Confidence             2 399999999997 3566777777    99999999997521            11      1112246678999999


Q ss_pred             EEeccCHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          309 IYMRADAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      ++.....+++.++++++++| ++  +.++++|+|+|+++||+.+.    .||+|+++
T Consensus       341 ~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~  392 (404)
T 3ip1_A          341 SQGHSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKV  392 (404)
T ss_dssp             CCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCE
T ss_pred             ecCCCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEec
Confidence            87643467899999999999 65  46899999999999999987    47877765

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.7e-49  Score=368.52  Aligned_cols=305  Identities=18%  Similarity=0.145  Sum_probs=252.9

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCC---CcccccceeEEEEeecC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL---PLILGRDISGEVAAVGA  105 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~---p~~~G~e~~G~V~~vG~  105 (364)
                      |||+++.+++.  .++++ +.|.|+|++|||+|||.++|||++|++.+.|..+.   ..+   |+++|||++| |+++|+
T Consensus         1 MkA~~~~~~~~--~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~~~p~v~G~E~~G-V~~vG~   73 (357)
T 2b5w_A            1 MKAIAVKRGED--RPVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG---FPEGEDHLVLGHEAVG-VVVDPN   73 (357)
T ss_dssp             CEEEEEETTCS--SCEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT---SCTTCSEEECCSEEEE-EEEECT
T ss_pred             CeEEEEeCCCC--ceEEE-ECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC---CCCCCCCcccCceeEE-EEEECC
Confidence            79999997765  38888 99999999999999999999999999999986432   245   8999999999 999999


Q ss_pred             CCCCCCCCCEEEEecCCC----------------------------CCCCcceeEEeecCCccccCCCCCChhhhccccc
Q 017901          106 SVRSLTVGQEVFGALHPT----------------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPF  157 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~~~~----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  157 (364)
                      + ++|++||||++.....                            ..+|+|+||+++|.+.++++|++++ + +|+++.
T Consensus        74 ~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~~  150 (357)
T 2b5w_A           74 D-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLIE  150 (357)
T ss_dssp             T-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-T-TGGGHH
T ss_pred             C-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-h-hhhhhc
Confidence            9 9999999999863211                            2369999999999999999999999 5 556778


Q ss_pred             hHHHHHHHHHHhcccCCC------CEEEEEcCCchHHHHH-HHHH-HHcCCe-EEEeeCCcc----HHHHHHcCCceeee
Q 017901          158 AALTAWRALKCAARMSEG------QRLLVLGGGGAVGFAA-VQFS-VASGCH-VSATCGSKS----IDRVLAAGAEQAVD  224 (364)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g------~~vli~g~~g~~G~~~-~~~a-~~~g~~-vi~~~~~~~----~~~~~~~g~~~v~~  224 (364)
                      ++.|||+++ +.+++++|      ++|+|+|+ |++|+++ +|+| +.+|++ |++++++++    +++++++|++++ +
T Consensus       151 ~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~  227 (357)
T 2b5w_A          151 PISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-D  227 (357)
T ss_dssp             HHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-E
T ss_pred             hHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-C
Confidence            999999999 67899999      99999997 9999999 9999 999997 999988765    488999999999 8


Q ss_pred             CCChhHHHHhc---CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhc
Q 017901          225 YSSKDIELAIK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS  301 (364)
Q Consensus       225 ~~~~~~~~~i~---g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (364)
                      +++.++.+ ++   +++|+||||+|++..+..++++++++|+++.+|....         ......   ...+ ....+.
T Consensus       228 ~~~~~~~~-i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~---------~~~~~~---~~~~-~~~~~~  293 (357)
T 2b5w_A          228 SRQTPVED-VPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSD---------WAFEVD---AGAF-HREMVL  293 (357)
T ss_dssp             TTTSCGGG-HHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCC---------CCCCCC---HHHH-HHHHHH
T ss_pred             CCccCHHH-HHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCC---------CCceec---HHHH-hHHHHh
Confidence            87665544 32   3499999999997688999999999999999997510         000110   1000 001267


Q ss_pred             cceeEEEEEeccCHHHHHHHHHHHHcC--C-ceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          302 YGIDYSYIYMRADAEGLEEIRRLSETG--K-LKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +++++.+++.. +.++++++++++++|  + +++.++++|+|+|+++||+.+   +..||+|++++
T Consensus       294 ~~~~i~g~~~~-~~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~  355 (357)
T 2b5w_A          294 HNKALVGSVNS-HVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFS  355 (357)
T ss_dssp             TTCEEEECCCC-CHHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECC
T ss_pred             CCeEEEEeccC-CHHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEec
Confidence            88999887754 578899999999999  8 677889999999999999988   34689999874

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.2e-49  Score=359.79  Aligned_cols=313  Identities=21%  Similarity=0.252  Sum_probs=252.1

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ++||++++.+++++..++++ +.|.|+|+++||+|||.++|||++|++.+.|..+.  ...+|+++|||++|+|+++  +
T Consensus         2 ~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~--~   76 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI--VKTYPFVPGIDLAGVVVSS--Q   76 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS--CCSSSBCCCSEEEEEEEEC--C
T ss_pred             CcceEEEEecCCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCC--CCCCCcccCcceEEEEEec--C
Confidence            36999999998877778999 99999999999999999999999999999885321  2357999999999999995  5


Q ss_pred             CCCCCCCCEEEEecC--CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHH--HhcccCCCC-EEEEE
Q 017901          107 VRSLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK--CAARMSEGQ-RLLVL  181 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~vli~  181 (364)
                      +++|++||||++...  ....+|+|+||+++|.+.++++|+++++++||+++++++|||.++.  ++.++++|+ +|+|+
T Consensus        77 v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~  156 (328)
T 1xa0_A           77 HPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVT  156 (328)
T ss_dssp             SSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEES
T ss_pred             CCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEe
Confidence            688999999998642  1124699999999999999999999999999999999999998764  346788986 99999


Q ss_pred             cCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChh--HHHHhc-CCccEEEECCCCchhHHHHHhh
Q 017901          182 GGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKD--IELAIK-GKFDAVLDTIGAPETERLGLNF  257 (364)
Q Consensus       182 g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~--~~~~i~-g~~D~vid~~g~~~~~~~~~~~  257 (364)
                      |++|++|++++|+|+.+|++|++++++++ ++.++++|+++++|+++.+  ....+. +++|++|||+|++ .+..++++
T Consensus       157 Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~  235 (328)
T 1xa0_A          157 GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGR-TLATVLSR  235 (328)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTT-THHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHH-HHHHHHHh
Confidence            98899999999999999999999987654 5888999999999987543  112222 2399999999997 89999999


Q ss_pred             ccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec-cC----HHHHHHHHHHHHcCCcee
Q 017901          258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR-AD----AEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       258 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~g~i~~  332 (364)
                      ++++|+++.+|....           .+.      ..+...++.+++++.+++.. ..    .+.++.+.++++++ +++
T Consensus       236 l~~~G~~v~~G~~~~-----------~~~------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~  297 (328)
T 1xa0_A          236 MRYGGAVAVSGLTGG-----------AEV------PTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LER  297 (328)
T ss_dssp             EEEEEEEEECSCCSS-----------SCC------CCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHH
T ss_pred             hccCCEEEEEeecCC-----------CCC------CCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Cce
Confidence            999999999986511           010      00111345678888887431 12    23456666777777 776


Q ss_pred             ccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          333 PVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       333 ~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                       ++++|+|+|+++||+.+.+++..||+|++++
T Consensus       298 -~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          298 -IAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             -HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             -eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence             4789999999999999999988899999874

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=5.9e-49  Score=370.09  Aligned_cols=318  Identities=17%  Similarity=0.138  Sum_probs=257.0

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCC-CC-----CeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEE
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDL-KP-----NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~-~~-----~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (364)
                      +|||+++.++   +.++++ +.|.|+| ++     +||+|||.++|||++|++.+.|..    +..+|+++|||++|+|+
T Consensus         2 ~MkA~~~~~~---~~l~~~-~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~----~~~~p~v~GhE~~G~V~   73 (398)
T 2dph_A            2 GNKSVVYHGT---RDLRVE-TVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF----IVPKGHVLGHEITGEVV   73 (398)
T ss_dssp             CEEEEEEEET---TEEEEE-EECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS----CCCTTCBCCCCEEEEEE
T ss_pred             ccEEEEEEcC---CCEEEE-EccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC----CCCCCcccCCceEEEEE
Confidence            6999999965   468999 9999987 68     999999999999999999999853    23679999999999999


Q ss_pred             eecCCCCCCCCCCEEEEecC------------------------------C----CCCCCcceeEEeecCC--ccccCCC
Q 017901          102 AVGASVRSLTVGQEVFGALH------------------------------P----TAVRGTYADYAVLSED--ELTPKPV  145 (364)
Q Consensus       102 ~vG~~~~~~~~Gd~V~~~~~------------------------------~----~~~~g~~~~~~~~~~~--~~~~ip~  145 (364)
                      ++|+++++|++||||+....                              .    ...+|+|+||++++.+  .++++|+
T Consensus        74 ~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~  153 (398)
T 2dph_A           74 EKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGD  153 (398)
T ss_dssp             EECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSS
T ss_pred             EECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCC
Confidence            99999999999999996421                              0    0146999999999987  8999999


Q ss_pred             CCChhh----hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCC
Q 017901          146 SVTHAD----ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGA  219 (364)
Q Consensus       146 ~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~  219 (364)
                      ++++++    +|++++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++ ++++++|+
T Consensus       154 ~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  231 (398)
T 2dph_A          154 KEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAG-AGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF  231 (398)
T ss_dssp             HHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC
T ss_pred             CCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence            999998    889999999999999 689999999999999 59999999999999999 99999877655 88999999


Q ss_pred             ceeeeCCChhH-HHHhc----C-CccEEEECCCCch--------------hHHHHHhhccCCCEEEEEccCchhhhhccc
Q 017901          220 EQAVDYSSKDI-ELAIK----G-KFDAVLDTIGAPE--------------TERLGLNFLKRGGHYMTLHGETAALADHYG  279 (364)
Q Consensus       220 ~~v~~~~~~~~-~~~i~----g-~~D~vid~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  279 (364)
                      + ++++++.++ .+.++    + ++|+||||+|+..              .+..++++|+++|+++.+|...........
T Consensus       232 ~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~  310 (398)
T 2dph_A          232 E-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVN  310 (398)
T ss_dssp             E-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSS
T ss_pred             c-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccc
Confidence            6 888877664 55443    2 3999999999852              688999999999999999864100000000


Q ss_pred             -cccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce--e--ccceeeccccHHHHHHHHhcCC
Q 017901          280 -LALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK--I--PVDKTFHMTQVREAHEAKDKRL  354 (364)
Q Consensus       280 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~--~~~~~~~l~~~~eA~~~~~~~~  354 (364)
                       .....+      ..++...++.+++++.+++.. ..+.+.++++++++|+++  +  .++++|+|+|+++||+.+.+++
T Consensus       311 ~~~~~~~------~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~  383 (398)
T 2dph_A          311 KDAGSGR------LHLDFGKMWTKSIRIMTGMAP-VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGS  383 (398)
T ss_dssp             HHHHTTE------EEEEHHHHHHTTCEEECSSCC-GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTC
T ss_pred             ccccCCc------ccccHHHHhhcCCEEEEeccC-cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCC
Confidence             000000      011112356678888776543 356789999999999998  6  5889999999999999999888


Q ss_pred             CCCeEEEEcC
Q 017901          355 IPGKVVLEFD  364 (364)
Q Consensus       355 ~~gkvvi~~~  364 (364)
                      . ||+|++++
T Consensus       384 ~-gKvvv~~~  392 (398)
T 2dph_A          384 P-AKFVIDPH  392 (398)
T ss_dssp             S-CEEEECTT
T ss_pred             c-eEEEEecC
Confidence            8 99999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=6.4e-48  Score=350.08  Aligned_cols=294  Identities=28%  Similarity=0.361  Sum_probs=251.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.+++.+.  .++ +.|.|+|+++||+|||.++|||++|++.+.|.++.  ...+|+++|||++|+|+       
T Consensus         1 Mka~~~~~~g~~~--~l~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~-------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPL--ELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVVE-------   68 (302)
T ss_dssp             CEEEEECSTTSCE--EEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEET-------
T ss_pred             CeEEEEcCCCCch--heE-ECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcccceEEEEEE-------
Confidence            7999999888773  455 88889999999999999999999999999986432  23579999999999998       


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                          ||||++...    +|+|+||++++.+.++++|++++++++|+++++++|||+++.+.+ +++|++|+|+|++|++|
T Consensus        69 ----GdrV~~~~~----~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG  139 (302)
T 1iz0_A           69 ----GRRYAALVP----QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALG  139 (302)
T ss_dssp             ----TEEEEEECS----SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHH
T ss_pred             ----CcEEEEecC----CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHH
Confidence                999999864    599999999999999999999999999999999999999997677 99999999999889999


Q ss_pred             HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEE
Q 017901          189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT  266 (364)
Q Consensus       189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~  266 (364)
                      ++++|+|+..|++|+++++++++ +.++++|+++++++++ .++.+.+.+ +|++|| +|+. .+..++++++++|+++.
T Consensus       140 ~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~-~d~vid-~g~~-~~~~~~~~l~~~G~~v~  216 (302)
T 1iz0_A          140 TAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGG-LDLVLE-VRGK-EVEESLGLLAHGGRLVY  216 (302)
T ss_dssp             HHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTS-EEEEEE-CSCT-THHHHHTTEEEEEEEEE
T ss_pred             HHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcC-ceEEEE-CCHH-HHHHHHHhhccCCEEEE
Confidence            99999999999999999886665 8889999999999887 777777766 999999 9996 99999999999999999


Q ss_pred             EccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec---cCHHHHHHHHH---HHHcCCceeccceeecc
Q 017901          267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR---ADAEGLEEIRR---LSETGKLKIPVDKTFHM  340 (364)
Q Consensus       267 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~g~i~~~~~~~~~l  340 (364)
                      +|....           ..      ..++...++.+++++.+++..   ...+.++++++   ++.+|++++.++++|+|
T Consensus       217 ~g~~~~-----------~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  279 (302)
T 1iz0_A          217 IGAAEG-----------EV------APIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPVVGPVFPF  279 (302)
T ss_dssp             C------------------------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEG
T ss_pred             EeCCCC-----------CC------CCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcccccceEEcH
Confidence            986511           00      001112356778888887652   24678899999   99999999999999999


Q ss_pred             ccHHHHHHHHhcCCCCCeEEEEc
Q 017901          341 TQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       341 ~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +|+++||+.+.+++..||+|+++
T Consensus       280 ~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          280 AEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             GGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999999888889999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=2.5e-47  Score=354.27  Aligned_cols=322  Identities=19%  Similarity=0.238  Sum_probs=260.9

Q ss_pred             ccccceeeEEe-ccc---CCC--ceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCC--ccccCCCCCccccc
Q 017901           24 LVTTSCRAVVL-PRF---GGP--EVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYG--RSIFEPLLPLILGR   94 (364)
Q Consensus        24 ~~~~~~~a~~~-~~~---g~~--~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~--~~~~~~~~p~~~G~   94 (364)
                      .+|++||++++ ..+   |.+  +.++++ +.|.|+| ++|||+|||.++|||++|++.+.+..  ....+..+|.++||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~   82 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG   82 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEE-EEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEE-eecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence            47789999999 565   555  789999 9999999 99999999999999999998877621  11113367899999


Q ss_pred             ceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCC-----ChhhhccccchHHHHHHHHHHh
Q 017901           95 DISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV-----THADASAIPFAALTAWRALKCA  169 (364)
Q Consensus        95 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~-----~~~~aa~~~~~~~ta~~~l~~~  169 (364)
                      |++|+|++  +++++|++||||++..      |+|+||++++.+.++++|+++     +++ +|+++.+++|||+++.+.
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~~~------G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~  153 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTSFY------WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEK  153 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEEEE------EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHH
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEecC------CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHh
Confidence            99999999  8899999999999873      799999999999999999999     555 778889999999999788


Q ss_pred             cccCCC--CEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHH-cCCceeeeCCChhHHHHhc----CCccE
Q 017901          170 ARMSEG--QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLA-AGAEQAVDYSSKDIELAIK----GKFDA  240 (364)
Q Consensus       170 ~~~~~g--~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~-~g~~~v~~~~~~~~~~~i~----g~~D~  240 (364)
                      +++++|  ++|+|+|++|++|++++|+++..|+ +|+++++++++ +.+++ +|++.++|+++.++.+.+.    +++|+
T Consensus       154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~  233 (357)
T 2zb4_A          154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDV  233 (357)
T ss_dssp             SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred             cCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCE
Confidence            999999  9999999889999999999999999 99999887654 66666 9999999988766655554    23999


Q ss_pred             EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHH
Q 017901          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAE  316 (364)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  316 (364)
                      +|||+|+. .+..++++++++|+++.+|....     +......+....   ......++.+++++.+++...    ..+
T Consensus       234 vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~i~g~~~~~~~~~~~~  304 (357)
T 2zb4_A          234 YFDNVGGN-ISDTVISQMNENSHIILCGQISQ-----YNKDVPYPPPLS---PAIEAIQKERNITRERFLVLNYKDKFEP  304 (357)
T ss_dssp             EEESCCHH-HHHHHHHTEEEEEEEEECCCGGG-----TTSCCCSSCCCC---HHHHHHHHHHTCEEEECCGGGGGGGHHH
T ss_pred             EEECCCHH-HHHHHHHHhccCcEEEEECCccc-----cccCccccccch---hhhhhhhhcceeEEEEeehhhhhHHHHH
Confidence            99999985 89999999999999999987521     000000000000   000113566788888876531    156


Q ss_pred             HHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          317 GLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       317 ~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      .++++++++++|++++.+...|+|+++++||+.+.+++..||+|++++
T Consensus       305 ~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  352 (357)
T 2zb4_A          305 GILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCIS  352 (357)
T ss_dssp             HHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECC
T ss_pred             HHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEe
Confidence            789999999999999877777999999999999999988899999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.1e-48  Score=362.95  Aligned_cols=317  Identities=19%  Similarity=0.199  Sum_probs=253.6

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCC-CCe------EEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEE
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNE------VLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV  100 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~e------VlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V  100 (364)
                      +|||+++.+++   .++++ +.|.|+|. ++|      |+|||.++|||++|++.+.|..+    ..+|+++|||++|+|
T Consensus         2 ~Mka~~~~~~~---~l~~~-~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~p~v~GhE~~G~V   73 (398)
T 1kol_A            2 GNRGVVYLGSG---KVEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT----AQVGLVLGHEITGEV   73 (398)
T ss_dssp             CEEEEEEEETT---EEEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC----CCTTCBCCCCEEEEE
T ss_pred             ccEEEEEecCC---ceEEE-EecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC----CCCCcccCcccEEEE
Confidence            69999999654   58999 99999987 898      99999999999999999998532    357899999999999


Q ss_pred             EeecCCCCCCCCCCEEEEecC-----------------------------C----CCCCCcceeEEeecCC--ccccCCC
Q 017901          101 AAVGASVRSLTVGQEVFGALH-----------------------------P----TAVRGTYADYAVLSED--ELTPKPV  145 (364)
Q Consensus       101 ~~vG~~~~~~~~Gd~V~~~~~-----------------------------~----~~~~g~~~~~~~~~~~--~~~~ip~  145 (364)
                      +++|+++++|++||||+....                             .    ...+|+|+||+++|.+  .++++|+
T Consensus        74 ~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~  153 (398)
T 1kol_A           74 IEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPD  153 (398)
T ss_dssp             EEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSC
T ss_pred             EEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCC
Confidence            999999999999999985310                             0    0246999999999987  8999999


Q ss_pred             CCChhh----hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCC
Q 017901          146 SVTHAD----ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGA  219 (364)
Q Consensus       146 ~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~  219 (364)
                      ++++.+    +|++++++.|||+++. .+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ ++++++|+
T Consensus       154 ~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa  231 (398)
T 1kol_A          154 RDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF  231 (398)
T ss_dssp             HHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC
T ss_pred             CcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC
Confidence            999888    7888999999999994 78999999999999 69999999999999999 78888776655 88999999


Q ss_pred             ceeeeCCChh-HHHHhc----C-CccEEEECCCCch---------------hHHHHHhhccCCCEEEEEccCchhhhhcc
Q 017901          220 EQAVDYSSKD-IELAIK----G-KFDAVLDTIGAPE---------------TERLGLNFLKRGGHYMTLHGETAALADHY  278 (364)
Q Consensus       220 ~~v~~~~~~~-~~~~i~----g-~~D~vid~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  278 (364)
                      + +++++..+ +.+.++    + ++|+||||+|++.               .+..++++++++|+++.+|.....     
T Consensus       232 ~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-----  305 (398)
T 1kol_A          232 E-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTE-----  305 (398)
T ss_dssp             E-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSC-----
T ss_pred             c-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCC-----
Confidence            7 78876543 454443    1 3999999999852               688999999999999999864100     


Q ss_pred             ccccccchhhH--HHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce---eccceeeccccHHHHHHHHhcC
Q 017901          279 GLALGLPIATT--VLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK---IPVDKTFHMTQVREAHEAKDKR  353 (364)
Q Consensus       279 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~---~~~~~~~~l~~~~eA~~~~~~~  353 (364)
                       . ........  ..+.+.+..++.+++++.+.... ..+.+.++++++.+|+++   +.++++|+|+|+++||+.+.++
T Consensus       306 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~  382 (398)
T 1kol_A          306 -D-PGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAG  382 (398)
T ss_dssp             -C-TTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHT
T ss_pred             -c-ccccccccccccccccHHHHhhcccEEEecccC-hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCC
Confidence             0 00000000  00011112356678888775432 356788999999999998   4688999999999999999988


Q ss_pred             CCCCeEEEEcC
Q 017901          354 LIPGKVVLEFD  364 (364)
Q Consensus       354 ~~~gkvvi~~~  364 (364)
                      +. ||+|++++
T Consensus       383 ~~-gKvvi~~~  392 (398)
T 1kol_A          383 VP-KKFVIDPH  392 (398)
T ss_dssp             CS-CEEEECTT
T ss_pred             Cc-eEEEEEeC
Confidence            87 99999864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=2.9e-48  Score=362.71  Aligned_cols=307  Identities=19%  Similarity=0.216  Sum_probs=253.1

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc------------c-----------
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS------------I-----------   83 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~------------~-----------   83 (364)
                      .+||+++...  ++..++++ +.|.|+|++|||+|||.+++||++|++.+.|..+.            .           
T Consensus         6 ~~mka~v~~~--~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~   82 (379)
T 3iup_A            6 LQLRSRIKSS--GELELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMR   82 (379)
T ss_dssp             EEEEEEECTT--SEEEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHH
T ss_pred             hhHHHHHhcC--CCCceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccc
Confidence            4689988863  34579999 99999999999999999999999999999885210            0           


Q ss_pred             ---cCCCCCcccccceeEEEEeecCCC-CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchH
Q 017901           84 ---FEPLLPLILGRDISGEVAAVGASV-RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus        84 ---~~~~~p~~~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  159 (364)
                         ....+|+++|||++|+|+++|+++ ++|++||||++...     |+|+||++++.+.++++|+++++++||++++.+
T Consensus        83 ~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~-----G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  157 (379)
T 3iup_A           83 SMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG-----AMYSQYRCIPADQCLVLPEGATPADGASSFVNP  157 (379)
T ss_dssp             HHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCS-----CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHH
T ss_pred             ccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCC-----CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhH
Confidence               023578999999999999999999 89999999999865     999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEc-CCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--
Q 017901          160 LTAWRALKCAARMSEGQRLLVLG-GGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--  235 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~g-~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--  235 (364)
                      +|||+++ +... ++|++|+|+| |+|++|++++|+|+.+|++|+++++++++ +.++++|+++++|+++.++.+.++  
T Consensus       158 ~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~  235 (379)
T 3iup_A          158 LTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEA  235 (379)
T ss_dssp             HHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHH
T ss_pred             HHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHH
Confidence            9999887 4455 8999999996 79999999999999999999999877665 889999999999998888777665  


Q ss_pred             ----CCccEEEECCCCchhHHHHHhhcc-----CC-----------CEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901          236 ----GKFDAVLDTIGAPETERLGLNFLK-----RG-----------GHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (364)
Q Consensus       236 ----g~~D~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (364)
                          | +|++|||+|++.....++++++     ++           |+++.+|...           ..+.        .
T Consensus       236 t~~~g-~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~-----------~~~~--------~  295 (379)
T 3iup_A          236 LVSTG-ATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLD-----------TSPT--------E  295 (379)
T ss_dssp             HHHHC-CCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSE-----------EEEE--------E
T ss_pred             hcCCC-ceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCC-----------CCcc--------c
Confidence                5 9999999999767788888885     55           4555554431           1111        1


Q ss_pred             hhhhhccceeEEEEEecc-----CH----HHHHHHHHHHHcCCceeccceeeccccH--HHHHHHHhcCCCCCeEEEEcC
Q 017901          296 MQTWYSYGIDYSYIYMRA-----DA----EGLEEIRRLSETGKLKIPVDKTFHMTQV--REAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~g~i~~~~~~~~~l~~~--~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +...+.+++++.+++...     ..    +.++.+++++.+ .+++.++++|+|+|+  ++||+.+.+++..||+|++++
T Consensus       296 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~  374 (379)
T 3iup_A          296 FNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPN  374 (379)
T ss_dssp             ECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETT
T ss_pred             cccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCC
Confidence            123566788888876521     22    334666666666 588889999999999  999999999999999999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=9.3e-48  Score=387.99  Aligned_cols=303  Identities=26%  Similarity=0.298  Sum_probs=262.6

Q ss_pred             ceeeEEecccCCCceEEEcccccC--CCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEV--PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~--p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      ....+.+..+|.++.++++ +.+.  |+|++|||+|||.++|||++|++++.|.++      .|.++|||++|+|+++|+
T Consensus       209 ~~~~l~~~~~G~~~~L~~~-~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~------~~~~lG~E~aG~V~~vG~  281 (795)
T 3slk_A          209 TGWRLEATRPGSLDGLALV-DEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP------GVASLGSEGAGVVVETGP  281 (795)
T ss_dssp             SSCCEEESSTTSSTTEEEC-CCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS------SCCCSCCCEEEEEEEECS
T ss_pred             ceEEEecCCCCCccceEEE-eCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC------CCccccceeEEEEEEeCC
Confidence            3467778889999999998 7774  578999999999999999999999999642      356799999999999999


Q ss_pred             CCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCc
Q 017901          106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG  185 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g  185 (364)
                      ++++|++||||+++..     |+|++|++++.+.++++|+++++++||++++.++|||+++.+.+++++|++|||+|++|
T Consensus       282 ~V~~~~vGDrV~~~~~-----G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaG  356 (795)
T 3slk_A          282 GVTGLAPGDRVMGMIP-----KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAG  356 (795)
T ss_dssp             SCCSSCTTCEEEECCS-----SCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTB
T ss_pred             CCCcCCCCCEEEEEec-----CCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCC
Confidence            9999999999999865     99999999999999999999999999999999999999988889999999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc------CCccEEEECCCCchhHHHHHhhcc
Q 017901          186 AVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK------GKFDAVLDTIGAPETERLGLNFLK  259 (364)
Q Consensus       186 ~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~------g~~D~vid~~g~~~~~~~~~~~l~  259 (364)
                      ++|++++|+||..|++|++++++++++.++ +|+++++++++.++.+.++      | +|+||||+|++ .+..++++++
T Consensus       357 gvG~~aiqlAk~~Ga~V~~t~~~~k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~G-vDvVld~~gg~-~~~~~l~~l~  433 (795)
T 3slk_A          357 GVGMAAIQLARHLGAEVYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRG-VDVVLNSLAGE-FADASLRMLP  433 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECCGGGGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSC-CSEEEECCCTT-TTHHHHTSCT
T ss_pred             HHHHHHHHHHHHcCCEEEEEeChHHhhhhh-cChhheeecCChhHHHHHHHHcCCCC-eEEEEECCCcH-HHHHHHHHhc
Confidence            999999999999999999998777545444 9999999999888887765      4 99999999997 8899999999


Q ss_pred             CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----CHHHHHHHHHHHHcCCceecc
Q 017901          260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----DAEGLEEIRRLSETGKLKIPV  334 (364)
Q Consensus       260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~i~~~~  334 (364)
                      ++|+++.+|....            ...  ..+     ....+++++.++....     ..+.+.++++++++|++++.+
T Consensus       434 ~~Gr~v~iG~~~~------------~~~--~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~  494 (795)
T 3slk_A          434 RGGRFLELGKTDV------------RDP--VEV-----ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLP  494 (795)
T ss_dssp             TCEEEEECCSTTC------------CCH--HHH-----HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCEEEEeccccc------------cCc--ccc-----cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCc
Confidence            9999999996511            110  011     1123567776665421     146789999999999999999


Q ss_pred             ceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          335 DKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       335 ~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +++|+++|+++||+.+.+++..||+|++++
T Consensus       495 ~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~  524 (795)
T 3slk_A          495 VTAWDVRQAPEALRHLSQARHVGKLVLTMP  524 (795)
T ss_dssp             EEEEEGGGHHHHHHHHHHTCCCBEEEEECC
T ss_pred             ceeEcHHHHHHHHHHHhcCCccceEEEecC
Confidence            999999999999999999999999999863

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.5e-46  Score=349.87  Aligned_cols=306  Identities=16%  Similarity=0.155  Sum_probs=246.7

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCC-CeEEEEEeEeecChhhhhhhcc--CCccccCCCC---CcccccceeEEEEe
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKP-NEVLVRTRAVSINPLDTRMRSG--YGRSIFEPLL---PLILGRDISGEVAA  102 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g--~~~~~~~~~~---p~~~G~e~~G~V~~  102 (364)
                      |||+++.+++.+  ++++ +.|.|+|++ +||+|||.++|||++|++.+.|  .++   ...+   |+++|||++|+|++
T Consensus         1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---~~~~~~~p~v~G~E~~G~V~~   74 (366)
T 2cdc_A            1 MKAIIVKPPNAG--VQVK-DVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS---TLPKGKDFLVLGHEAIGVVEE   74 (366)
T ss_dssp             CEEEEECTTSCC--CEEE-ECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC----------CCSCEECCSEEEEEECS
T ss_pred             CeEEEEeCCCCc--eEEE-ECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC---CCCcCCCCCcCCcceEEEEEe
Confidence            799999987763  8888 999999999 9999999999999999999998  432   1245   89999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCC------------------------C-C-CCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901          103 VGASVRSLTVGQEVFGALHP------------------------T-A-VRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (364)
Q Consensus       103 vG~~~~~~~~Gd~V~~~~~~------------------------~-~-~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (364)
                        ++ ++|++||||+.....                        + . .+|+|+||++++.+.++++|++++ ++| +++
T Consensus        75 --~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~A-al~  149 (366)
T 2cdc_A           75 --SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIG-ILA  149 (366)
T ss_dssp             --CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTG-GGH
T ss_pred             --CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhh-hhc
Confidence              67 889999999975310                        1 1 369999999999999999999999 776 477


Q ss_pred             chHHHHHHHHH--H--hcccC--C-------CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc---cH-HHHHHcCC
Q 017901          157 FAALTAWRALK--C--AARMS--E-------GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK---SI-DRVLAAGA  219 (364)
Q Consensus       157 ~~~~ta~~~l~--~--~~~~~--~-------g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~---~~-~~~~~~g~  219 (364)
                      .++.|||+++.  +  .++++  +       |++|+|+|+ |++|++++|+|+..|++|+++.+++   ++ +.++++|+
T Consensus       150 ~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga  228 (366)
T 2cdc_A          150 QPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKT  228 (366)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTC
T ss_pred             CcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCC
Confidence            88999999996  4  78888  8       999999997 9999999999999999999998876   44 78899999


Q ss_pred             ceeeeCCChhHHHHhc---CCccEEEECCCCchhH-HHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901          220 EQAVDYSSKDIELAIK---GKFDAVLDTIGAPETE-RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (364)
Q Consensus       220 ~~v~~~~~~~~~~~i~---g~~D~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (364)
                      +++ | ++ ++.+.+.   +++|++|||+|++..+ ..++++|+++|+++.+|....           ... .+....  
T Consensus       229 ~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~-----------~~~-~~~~~~--  291 (366)
T 2cdc_A          229 NYY-N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTS-----------GSV-PLDYKT--  291 (366)
T ss_dssp             EEE-E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCS-----------CEE-EEEHHH--
T ss_pred             cee-c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCC-----------Ccc-ccChhh--
Confidence            988 7 55 4433331   2399999999997678 999999999999999987511           000 000100  


Q ss_pred             hhhhhccceeEEEEEeccCHHHHHHHHHHHHcCC------ceeccceeeccccHHHHHHHH-hcCCCCCeEEEEcC
Q 017901          296 MQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGK------LKIPVDKTFHMTQVREAHEAK-DKRLIPGKVVLEFD  364 (364)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------i~~~~~~~~~l~~~~eA~~~~-~~~~~~gkvvi~~~  364 (364)
                      ...++.+++++.+++.. ..++++++++++++|+      +++.++++|+|+|+++||+.+ .+++..||+|++++
T Consensus       292 ~~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          292 LQEIVHTNKTIIGLVNG-QKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             HHHHHHTTCEEEECCCC-CHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             hHHHHhcCcEEEEecCC-CHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            01256788899887654 5788999999999999      556788999999999999994 34666799999875

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=6.2e-44  Score=328.32  Aligned_cols=308  Identities=19%  Similarity=0.210  Sum_probs=249.8

Q ss_pred             ccceeeEEeccc--CC--CceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEE
Q 017901           26 TTSCRAVVLPRF--GG--PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (364)
Q Consensus        26 ~~~~~a~~~~~~--g~--~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (364)
                      +++||++++.++  |.  ++.++++ +.|.|+|++|||+|||.++|||+.|+. +.+      +..+|+++|||++|+|+
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~-e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~------~~~~p~~~g~e~~G~Vv   76 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRI-ASK------RLKEGAVMMGQQVARVV   76 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHH-HTT------TCCTTSBCCCCEEEEEE
T ss_pred             cccccEEEEeecCCCCCCccceEEE-eCCCCCCCCCEEEEEEEEeccCHHHcc-ccC------cCCCCcccccceEEEEE
Confidence            457999999985  43  3789999 999999999999999999999999873 211      22568899999999999


Q ss_pred             eecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCC----CChhh-hccccchHHHHHHHHHHhcccCCCC
Q 017901          102 AVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS----VTHAD-ASAIPFAALTAWRALKCAARMSEGQ  176 (364)
Q Consensus       102 ~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~----~~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~  176 (364)
                      +.  ++++|++||||++.       |+|+||++++.+.++++|++    +++++ +|+++++++|||+++.+.+++++|+
T Consensus        77 ~~--~v~~~~vGdrV~~~-------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~  147 (333)
T 1v3u_A           77 ES--KNSAFPAGSIVLAQ-------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGE  147 (333)
T ss_dssp             EE--SCTTSCTTCEEEEC-------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSC
T ss_pred             ec--CCCCCCCCCEEEec-------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCC
Confidence            95  57889999999985       88999999999999999997    88887 5888999999999997888999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc----CCccEEEECCCCchh
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK----GKFDAVLDTIGAPET  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~----g~~D~vid~~g~~~~  250 (364)
                      +|+|+|++|++|++++|+++..|++|+++.+++++ +.++++|++.++|+++ .++.+.+.    +++|++|||+|++ .
T Consensus       148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~  226 (333)
T 1v3u_A          148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE-F  226 (333)
T ss_dssp             EEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHH-H
T ss_pred             EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChH-H
Confidence            99999988999999999999999999999877654 6778999998999876 55555443    3499999999987 8


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhcccccc-ccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHH
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLAL-GLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRL  324 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  324 (364)
                      +..++++++++|+++.+|....     +.... ..+.       .+...++.+++++.+++....     .+.+++++++
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~-------~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l  294 (333)
T 1v3u_A          227 LNTVLSQMKDFGKIAICGAISV-----YNRMDQLPPG-------PSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKW  294 (333)
T ss_dssp             HHHHHTTEEEEEEEEECCCCC------------CCBC-------CCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCEEEEEecccc-----ccCCCCCCCC-------cCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHH
Confidence            9999999999999999986521     00000 0000       011135677888888765321     4678899999


Q ss_pred             HHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901          325 SETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF  363 (364)
Q Consensus       325 ~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~  363 (364)
                      +++|++++.+...|+|+|+++||+.+.+++..||+|+++
T Consensus       295 ~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          295 VLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999987666789999999999999998889999974

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2.7e-44  Score=332.39  Aligned_cols=318  Identities=19%  Similarity=0.213  Sum_probs=250.0

Q ss_pred             cccceeeEEeccc--CCCc--eEEEcc-cccCCC-CCCCeEEEEEeEeecChhhhhhhccCCcccc-CCCCCccccccee
Q 017901           25 VTTSCRAVVLPRF--GGPE--VLEVRP-NVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-EPLLPLILGRDIS   97 (364)
Q Consensus        25 ~~~~~~a~~~~~~--g~~~--~~~~~~-~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~   97 (364)
                      ||.+||++++...  ++++  .++++. +.+.|. |++|||||||.++|+|+.|. .+.|...... ...+|+++|||++
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            5678999998876  6665  577751 567775 89999999999999888775 4455321100 1246899999999


Q ss_pred             EEEEe--ecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCc--cccCCC---CCChhhhccccchHHHHHHHHHHhc
Q 017901           98 GEVAA--VGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE--LTPKPV---SVTHADASAIPFAALTAWRALKCAA  170 (364)
Q Consensus        98 G~V~~--vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~--~~~ip~---~~~~~~aa~~~~~~~ta~~~l~~~~  170 (364)
                      |++.+  +|+++++|++||||++.       |+|+||++++.+.  ++++|+   +++++ +|+++++++|||+++.+.+
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~-------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~  151 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGI-------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVC  151 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEE-------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTS
T ss_pred             cceEEEEEecCCCCCCCCCEEEee-------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHh
Confidence            99999  99999999999999976       7899999999876  999996   35555 6788889999999997788


Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceeeeCCCh-hHHHHhc----CCccEEEE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAVDYSSK-DIELAIK----GKFDAVLD  243 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~~~~~~-~~~~~i~----g~~D~vid  243 (364)
                      ++++|++|+|+|++|++|++++|+|+..|++|+++.+++++ +.++ ++|++.++|+++. ++.+.+.    +++|++||
T Consensus       152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            99999999999988999999999999999999999887665 6776 7999999987653 4444333    23999999


Q ss_pred             CCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHH
Q 017901          244 TIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLE  319 (364)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  319 (364)
                      |+|+. .+..++++++++|+++.+|....     +..... ..      .++...++.+++++.+++...    ..+.++
T Consensus       232 ~~g~~-~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~-~~------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  298 (345)
T 2j3h_A          232 NVGGK-MLDAVLVNMNMHGRIAVCGMISQ-----YNLENQ-EG------VHNLSNIIYKRNRIQGFVVSDFYDKYSKFLE  298 (345)
T ss_dssp             SSCHH-HHHHHHTTEEEEEEEEECCCGGG-----TTCSSC-CC------BSCTTHHHHHTCEEEECCGGGGGGGHHHHHH
T ss_pred             CCCHH-HHHHHHHHHhcCCEEEEEccccc-----cccCCc-cc------cccHHHHhhhceeeceeeehhhhhhHHHHHH
Confidence            99996 99999999999999999986521     000000 00      011123556788888865431    134589


Q ss_pred             HHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          320 EIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       320 ~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      ++++++++|++++.+.++|+|+++++||+.+.+++..||+|++++
T Consensus       299 ~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  343 (345)
T 2j3h_A          299 FVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVA  343 (345)
T ss_dssp             HHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESS
T ss_pred             HHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            999999999999888888999999999999999999999999874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=3.8e-34  Score=316.41  Aligned_cols=300  Identities=20%  Similarity=0.230  Sum_probs=240.8

Q ss_pred             EEecccCCCceEEEcccccCCC-CC--CCeEEEEEeEeecChhhhhhhccCCcccc----CCCCCcccccceeEEEEeec
Q 017901           32 VVLPRFGGPEVLEVRPNVEVPD-LK--PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        32 ~~~~~~g~~~~~~~~~~~~~p~-~~--~~eVlV~v~~~~i~~~D~~~~~g~~~~~~----~~~~p~~~G~e~~G~V~~vG  104 (364)
                      +....+|..+.+.+. +.+... +.  ++||+|+|.++|+|+.|+++..|..+...    ....|.++|+|++|+|    
T Consensus      1533 l~~~~~g~l~sl~~~-~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V---- 1607 (2512)
T 2vz8_A         1533 VNVLSRGDLSSIRWV-CSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD---- 1607 (2512)
T ss_dssp             EEESSTTCTTSEEEE-ECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----
T ss_pred             EEccCCCCcCceEEE-ecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----
Confidence            344455666778887 665533 33  89999999999999999999999754321    1134678999999987    


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCC
Q 017901          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~  184 (364)
                            .+||+|+++..    .|+|++|+++|.+.++++|+++++++||++++.++|||+++.+.+++++|++|||+||+
T Consensus      1608 ------~vGdrV~g~~~----~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaa 1677 (2512)
T 2vz8_A         1608 ------ASGRRVMGMVP----AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGS 1677 (2512)
T ss_dssp             ------TTSCCEEEECS----SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTT
T ss_pred             ------ccCCEEEEeec----CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCC
Confidence                  27999999864    58999999999999999999999999999999999999999888999999999999999


Q ss_pred             chHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH----cCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHH
Q 017901          185 GAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA----AGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLG  254 (364)
Q Consensus       185 g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~----~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~  254 (364)
                      |++|++++|+|+..|++|+++++++++ +.+++    +|+++++++++.++.+.++    | ++|+||||+|+. .+..+
T Consensus      1678 GgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~-~l~~~ 1756 (2512)
T 2vz8_A         1678 GGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEE-KLQAS 1756 (2512)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHH-HHHHH
T ss_pred             hHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCch-HHHHH
Confidence            999999999999999999999887665 66665    7899999998888777664    1 399999999865 89999


Q ss_pred             HhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHHHHH----HHHH
Q 017901          255 LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLEEIR----RLSE  326 (364)
Q Consensus       255 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~  326 (364)
                      +++++++|+++.+|.....        ....         .....+.+++++.+++...    ..+.+..++    +++.
T Consensus      1757 l~~L~~~Gr~V~iG~~~~~--------~~~~---------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~ 1819 (2512)
T 2vz8_A         1757 VRCLAQHGRFLEIGKFDLS--------NNHA---------LGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQ 1819 (2512)
T ss_dssp             HTTEEEEEEEEECCCHHHH--------TTCE---------EEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHT
T ss_pred             HHhcCCCcEEEEeeccccc--------ccCc---------ccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHH
Confidence            9999999999999864110        0000         0013456788888875421    123344444    4455


Q ss_pred             cCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901          327 TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD  364 (364)
Q Consensus       327 ~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~  364 (364)
                      +|.+++.++++|+++++++||+.+.+++..||+|++++
T Consensus      1820 ~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A         1820 EGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp             TTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred             cCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence            78899989999999999999999999999999999863

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.87  E-value=6e-22  Score=167.96  Aligned_cols=182  Identities=25%  Similarity=0.375  Sum_probs=131.9

Q ss_pred             CccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH
Q 017901          138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA  216 (364)
Q Consensus       138 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~  216 (364)
                      +.++++|+++++++||++++++.|||+++.+.+++++|++|+|+|++|++|++++|+++..|++|+++.+++++ +.+++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            46899999999999999999999999999777899999999999999999999999999999999999887665 67788


Q ss_pred             cCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHH
Q 017901          217 AGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (364)
Q Consensus       217 ~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (364)
                      +|++.+++.++.++.+.+.     +++|++|||+|.. .+..++++++++|+++.+|....     +     .+.    .
T Consensus        82 ~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-----~-----~~~----~  146 (198)
T 1pqw_A           82 LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDV-----Y-----ADA----S  146 (198)
T ss_dssp             TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGG-----T-----TTC----E
T ss_pred             cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccCCEEEEEcCCCC-----c-----CcC----c
Confidence            9998888887665544442     2399999999976 89999999999999999987511     0     000    0


Q ss_pred             HHHhhhhhhccceeEEEEEe------cc--CHHHHHHHHHHHHcCCceecccee
Q 017901          292 LKKRMQTWYSYGIDYSYIYM------RA--DAEGLEEIRRLSETGKLKIPVDKT  337 (364)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~g~i~~~~~~~  337 (364)
                        +.. ..+.+++++.++..      ..  ..+.++++++++++|++++.+.++
T Consensus       147 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          147 --LGL-AALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             --EEG-GGGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             --CCh-hHhcCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence              000 12346677765432      11  146789999999999998865544

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.86  E-value=3.7e-11  Score=112.37  Aligned_cols=176  Identities=16%  Similarity=0.136  Sum_probs=126.2

Q ss_pred             CcccccceeEEEEeecCCCCCCCCCCEEEEec-----CCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHH
Q 017901           89 PLILGRDISGEVAAVGASVRSLTVGQEVFGAL-----HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW  163 (364)
Q Consensus        89 p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-----~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  163 (364)
                      -...|++.++.|.++|++++.+.+|+.++.-.     ......|++++|+..+...++++|++++...++. ..+..++|
T Consensus        74 ~~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~  152 (404)
T 1gpj_A           74 WVKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGS  152 (404)
T ss_dssp             EEEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHH
T ss_pred             eeecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHH
Confidence            34678999999999999999999999873210     0000236788888888888999999887776554 33445777


Q ss_pred             HHHHHhcc---cCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCC
Q 017901          164 RALKCAAR---MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGK  237 (364)
Q Consensus       164 ~~l~~~~~---~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~  237 (364)
                      .++.....   -.+|++|+|.| +|.+|.++++.++..|+ +|+++.++.++  +++.++|++ ++++  .++.+.+.+ 
T Consensus       153 ~av~~a~~~~~~l~g~~VlIiG-aG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~l~~~l~~-  227 (404)
T 1gpj_A          153 AAVELAERELGSLHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHLAR-  227 (404)
T ss_dssp             HHHHHHHHHHSCCTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHHHT-
T ss_pred             HHHHHHHHHhccccCCEEEEEC-hHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecH--HhHHHHhcC-
Confidence            77633221   25899999999 69999999999999999 89988887654  567888876 4433  245555556 


Q ss_pred             ccEEEECCCCchhHH--HHHhh--c--cCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPETER--LGLNF--L--KRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~  270 (364)
                      +|+||+|+|.+..+.  ..+..  +  +++|.++.++..
T Consensus       228 aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          228 SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            999999999763332  44555  3  567777777654

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.71  E-value=5.6e-09  Score=98.94  Aligned_cols=157  Identities=18%  Similarity=0.137  Sum_probs=106.8

Q ss_pred             CCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHH
Q 017901           88 LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK  167 (364)
Q Consensus        88 ~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~  167 (364)
                      +|.++ .++.|+|+++|.++..+.      .+..    .|.+...+..-.+.+.+-       ....++....++|+++.
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l~------a~~~----~Gilv~~~~~vn~sVae~-------~~r~l~~~~~s~~~g~~  265 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRLY------QFAA----AGDLAFPAINVNDSVTKS-------KFDNKYGTRHSLIDGIN  265 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHHH------HHHH----TTCCCSCEEECTTSHHHH-------TTHHHHHHHHHHHHHHH
T ss_pred             chhhh-cCeEEEEEEeCCChhHHH------HHHH----cCCEEEecCCccHHHHHH-------HHhhhhhhhhhhhHHHH
Confidence            45556 899999999999887651      1100    133322222111122220       00112334456777763


Q ss_pred             Hhc-ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECC
Q 017901          168 CAA-RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       168 ~~~-~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~  245 (364)
                      +.. ...+|++|+|.| .|.+|..+++.++.+|++|+++.++..+ +.+.+.|++ +.+     +.+.+.+ +|+|++|+
T Consensus       266 r~~~~~l~GktV~IiG-~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~-----l~e~l~~-aDvVi~at  337 (494)
T 3ce6_A          266 RGTDALIGGKKVLICG-YGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVT-----VEEAIGD-ADIVVTAT  337 (494)
T ss_dssp             HHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECC-----HHHHGGG-CSEEEECS
T ss_pred             hccCCCCCcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Eec-----HHHHHhC-CCEEEECC
Confidence            322 268999999999 7999999999999999999999877655 677888986 322     2334456 99999999


Q ss_pred             CCchhHH-HHHhhccCCCEEEEEccC
Q 017901          246 GAPETER-LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       246 g~~~~~~-~~~~~l~~~G~~v~~g~~  270 (364)
                      |....+. ..++.++++|+++.+|..
T Consensus       338 gt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          338 GNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             SSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             CCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            9875565 789999999999999864

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.54  E-value=2e-07  Score=85.65  Aligned_cols=94  Identities=18%  Similarity=0.240  Sum_probs=75.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce--eeeCCChhHHHHhcCCccEEEECCCCchh-
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ--AVDYSSKDIELAIKGKFDAVLDTIGAPET-  250 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~--v~~~~~~~~~~~i~g~~D~vid~~g~~~~-  250 (364)
                      +++|+|.|+ |++|++++++++.+|++|+++.++.++ +.+.+++...  +++.+..++.+.+.+ +|+||+|++.+.. 
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAE-ADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHT-CSEEEECCCCTTSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcC-CCEEEECCCcCCCC
Confidence            489999995 999999999999999999999887654 6666666544  344455566666667 9999999987632 


Q ss_pred             -----HHHHHhhccCCCEEEEEccC
Q 017901          251 -----ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 -----~~~~~~~l~~~G~~v~~g~~  270 (364)
                           ....++.++++|+++.++..
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~  269 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVD  269 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecC
Confidence                 56788999999999999864

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.35  E-value=1.6e-06  Score=80.13  Aligned_cols=95  Identities=19%  Similarity=0.242  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-cCCceeee-CCChhHHHHhcCCccEEEECCCCchh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAEQAVD-YSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-~g~~~v~~-~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      +|++|+|.| .|.+|+.+++.++.+|++|+++.++.++ +.+.+ +|+....+ .+..++.+.+.+ +|+||+|++.+..
T Consensus       167 ~g~~V~ViG-~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~-aDvVi~~~~~p~~  244 (377)
T 2vhw_A          167 EPADVVVIG-AGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKR-ADLVIGAVLVPGA  244 (377)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHH-CSEEEECCCCTTS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcC-CCEEEECCCcCCC
Confidence            578999999 5999999999999999999999877654 55555 67653232 233455555556 9999999987633


Q ss_pred             ------HHHHHhhccCCCEEEEEccC
Q 017901          251 ------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 ------~~~~~~~l~~~G~~v~~g~~  270 (364)
                            ....++.++++|.++.++..
T Consensus       245 ~t~~li~~~~l~~mk~g~~iV~va~~  270 (377)
T 2vhw_A          245 KAPKLVSNSLVAHMKPGAVLVDIAID  270 (377)
T ss_dssp             CCCCCBCHHHHTTSCTTCEEEEGGGG
T ss_pred             CCcceecHHHHhcCCCCcEEEEEecC
Confidence                  57888999999999999853

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.33  E-value=1.6e-06  Score=80.42  Aligned_cols=159  Identities=21%  Similarity=0.187  Sum_probs=100.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCcee-eeCCC-----------------------h
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSS-----------------------K  228 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v-~~~~~-----------------------~  228 (364)
                      ++++|+|.| .|.+|+.++++++.+|++|+++.++.. .+.+.++|++.+ ++..+                       .
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            689999999 799999999999999999888876654 477778998755 23311                       1


Q ss_pred             hHHHHhcCCccEEEECC---CCch--h-HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcc
Q 017901          229 DIELAIKGKFDAVLDTI---GAPE--T-ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY  302 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (364)
                      .+.+.+.+ +|+||+|+   |.+.  . ....++.+++++.++.++...+          +...     ...+...+..+
T Consensus       250 ~l~~~~~~-aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~g----------g~~~-----~~~~~~~~~~~  313 (384)
T 1l7d_A          250 AVLKELVK-TDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAG----------GNCP-----LSEPGKIVVKH  313 (384)
T ss_dssp             HHHHHHTT-CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGT----------CSST-----TCCTTCEEEET
T ss_pred             HHHHHhCC-CCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCC----------CCee-----cccCCcEEEEC
Confidence            14444556 99999999   5431  2 3678999999999999985411          0000     00011134556


Q ss_pred             ceeEEEEEeccCHHHHHHHHHHHHcCCceec---cce---eeccccHHHHHHHH
Q 017901          303 GIDYSYIYMRADAEGLEEIRRLSETGKLKIP---VDK---TFHMTQVREAHEAK  350 (364)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~---~~~---~~~l~~~~eA~~~~  350 (364)
                      ++++.+....+ ......+.+++.++.+...   ..+   .+.++...+.++..
T Consensus       314 ~v~i~g~~~~p-~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  366 (384)
T 1l7d_A          314 GVKIVGHTNVP-SRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGT  366 (384)
T ss_dssp             TEEEECCSSGG-GGGHHHHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHH
T ss_pred             CEEEEEeCCCc-chhHHHHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcC
Confidence            77777754321 2224557777777765532   111   45555445555543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.30  E-value=2.7e-06  Score=78.39  Aligned_cols=95  Identities=18%  Similarity=0.287  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-cCCceeeeC-CChhHHHHhcCCccEEEECCCCchh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAEQAVDY-SSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-~g~~~v~~~-~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      ++++|+|.|+ |.+|+.+++.++.+|++|+++.++.++ +.+.+ +|.....+. +..++.+.+.+ +|++|+|+|.+..
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~-~DvVi~~~g~~~~  242 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQH-ADLLIGAVLVPGA  242 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHH-CSEEEECCC----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhC-CCEEEECCCCCcc
Confidence            3589999995 999999999999999999999877654 44544 676532332 33455555556 9999999997631


Q ss_pred             ------HHHHHhhccCCCEEEEEccC
Q 017901          251 ------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 ------~~~~~~~l~~~G~~v~~g~~  270 (364)
                            ...+++.++++|+++.++..
T Consensus       243 ~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          243 KAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             ---CCSCHHHHTTSCTTCEEEECC--
T ss_pred             ccchhHHHHHHHhhcCCCEEEEEecC
Confidence                  57888999999999999864

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.28  E-value=3.6e-06  Score=72.85  Aligned_cols=103  Identities=17%  Similarity=0.117  Sum_probs=71.1

Q ss_pred             HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH----HcCCceeeeCCChhHHHHh-c-C
Q 017901          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL----AAGAEQAVDYSSKDIELAI-K-G  236 (364)
Q Consensus       164 ~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~----~~g~~~v~~~~~~~~~~~i-~-g  236 (364)
                      +.+ ....+.++++||..| +| .|..+..+++. +.+|+++..+++. +.++    ..+.+.-+.....++.+.. . +
T Consensus        82 ~~~-~~~~~~~~~~vldiG-~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~  157 (248)
T 2yvl_A           82 YIA-LKLNLNKEKRVLEFG-TG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEG  157 (248)
T ss_dssp             HHH-HHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTT
T ss_pred             HHH-HhcCCCCCCEEEEeC-CC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCC
Confidence            444 667889999999999 66 69999999998 8899999766553 4433    3343111111111111122 1 2


Q ss_pred             CccEEEECCCCc-hhHHHHHhhccCCCEEEEEccC
Q 017901          237 KFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|+|+...+.+ ..+..+.+.|+++|+++.....
T Consensus       158 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  192 (248)
T 2yvl_A          158 IFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT  192 (248)
T ss_dssp             CBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred             cccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            399999988876 6889999999999999988653

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.14  E-value=7.8e-06  Score=75.98  Aligned_cols=95  Identities=24%  Similarity=0.307  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceee-eCC-------------Ch--------hH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAV-DYS-------------SK--------DI  230 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~-~~~-------------~~--------~~  230 (364)
                      ++++|+|.| .|.+|+.++++|+.+|++|+++.++.+ .+.+.++|++.+. +..             ..        .+
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            578999999 799999999999999999999876654 4667888987542 211             11        23


Q ss_pred             HHHhcCCccEEEECCCCc-----hhH-HHHHhhccCCCEEEEEccC
Q 017901          231 ELAIKGKFDAVLDTIGAP-----ETE-RLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       231 ~~~i~g~~D~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.+.+ +|+||+|++.+     ..+ ...++.|++++.+|.++..
T Consensus       250 ~e~~~~-aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          250 AAQAKE-VDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHHHH-CSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHhCC-CCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence            344446 99999995321     223 5789999999999999854

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.04  E-value=5e-06  Score=65.70  Aligned_cols=103  Identities=16%  Similarity=0.150  Sum_probs=73.3

Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCc
Q 017901          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~  238 (364)
                      ++++++ +......+++++|.| +|.+|..+++.++..|++|++..++.++  .++.+++.. +....  ++.+.+.+ +
T Consensus         8 v~~~a~-~~~~~~~~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~--~~~~~~~~-~   81 (144)
T 3oj0_A            8 IPSIVY-DIVRKNGGNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN--DIDSLIKN-N   81 (144)
T ss_dssp             HHHHHH-HHHHHHCCCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS--CHHHHHHT-C
T ss_pred             HHHHHH-HHHHhccCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec--CHHHHhcC-C
Confidence            566666 334445599999999 7999999999998899997666776654  456777754 22222  34444556 9


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |+||.|++.+... .....+++++.++.++.+
T Consensus        82 Divi~at~~~~~~-~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           82 DVIITATSSKTPI-VEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             SEEEECSCCSSCS-BCGGGCCTTCEEEECCSS
T ss_pred             CEEEEeCCCCCcE-eeHHHcCCCCEEEEccCC
Confidence            9999999986332 233788999999998864

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.99  E-value=3.2e-05  Score=71.14  Aligned_cols=95  Identities=26%  Similarity=0.312  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeee-------------CC-----------Ch
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVD-------------YS-----------SK  228 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~-------------~~-----------~~  228 (364)
                      ++.+|+|.| .|.+|+.++++++.+|++|++..++..+ +.+.++|++.+..             +.           ..
T Consensus       189 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMG-AGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            578999999 7999999999999999999998776654 7788888753211             11           12


Q ss_pred             hHHHHhcCCccEEEECCCCch------hHHHHHhhccCCCEEEEEccC
Q 017901          229 DIELAIKGKFDAVLDTIGAPE------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++.+.+++ +|+||.|+..+.      .....++.+++|+.+|.+...
T Consensus       268 ~l~e~l~~-aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d  314 (405)
T 4dio_A          268 LVAEHIAK-QDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE  314 (405)
T ss_dssp             HHHHHHHT-CSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHhcC-CCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence            34455557 999999964321      346899999999999999754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.97  E-value=2e-05  Score=71.88  Aligned_cols=95  Identities=25%  Similarity=0.340  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-e--------CC-----------ChhHHH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-D--------YS-----------SKDIEL  232 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~--------~~-----------~~~~~~  232 (364)
                      ++.+|+|.| .|.+|+.+++.++.+|++|++..++.++ +.+.++|++.+. +        +.           ..++.+
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            678999999 7999999999999999999999776654 778888876331 0        00           123444


Q ss_pred             HhcCCccEEEECCCCc-----h-hHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAP-----E-TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.+ +|+||.|+..+     . .....++.+++++.+|.++..
T Consensus       262 ~l~~-aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d  304 (381)
T 3p2y_A          262 AITK-FDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE  304 (381)
T ss_dssp             HHTT-CSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHhc-CCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence            5556 99999997332     1 247899999999999999865

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.96  E-value=3.8e-05  Score=70.85  Aligned_cols=102  Identities=21%  Similarity=0.175  Sum_probs=77.2

Q ss_pred             HHHHHHHHhc-ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCc
Q 017901          161 TAWRALKCAA-RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       161 ta~~~l~~~~-~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~  238 (364)
                      ..+.++.+.. ..-.|++++|.| .|.+|..+++.++.+|++|+++.+++.+ ..+...|+. +.     ++.+.+.+ .
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~-v~-----~Leeal~~-A  276 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCG-YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFR-LV-----KLNEVIRQ-V  276 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHTTT-C
T ss_pred             HHHHHHHHhhCceecCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCE-ec-----cHHHHHhc-C
Confidence            4455554433 345899999999 8999999999999999999998766543 445566653 21     34455555 9


Q ss_pred             cEEEECCCCchhHH-HHHhhccCCCEEEEEccC
Q 017901          239 DAVLDTIGAPETER-LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~  270 (364)
                      |+++.|.|....+. ..+..+++++.++.+|..
T Consensus       277 DIVi~atgt~~lI~~e~l~~MK~gailINvgrg  309 (435)
T 3gvp_A          277 DIVITCTGNKNVVTREHLDRMKNSCIVCNMGHS  309 (435)
T ss_dssp             SEEEECSSCSCSBCHHHHHHSCTTEEEEECSST
T ss_pred             CEEEECCCCcccCCHHHHHhcCCCcEEEEecCC
Confidence            99999988765565 889999999999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.86  E-value=6.2e-05  Score=65.93  Aligned_cols=98  Identities=20%  Similarity=0.297  Sum_probs=72.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh----HHHHhc---CCccE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFDA  240 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~  240 (364)
                      -.|+++||+||++++|.+.++.+...|++|+.+.++++.  +.+.++|...   ..|..+.+    +.+.+.   |++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            368999999999999999999999999999999887764  4567777542   22444432    222222   67999


Q ss_pred             EEECCCCchh-------------------------HHHHHhhccCCCEEEEEccC
Q 017901          241 VLDTIGAPET-------------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       241 vid~~g~~~~-------------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++++.|....                         .+.+++.|+++|++|.++..
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~  161 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST  161 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence            9999986311                         36777888999999998754

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.80  E-value=0.00013  Score=64.19  Aligned_cols=101  Identities=21%  Similarity=0.233  Sum_probs=68.5

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHH----HHcCCceeeeCCChhHHHHhc-CCc
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRV----LAAGAEQAVDYSSKDIELAIK-GKF  238 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~----~~~g~~~v~~~~~~~~~~~i~-g~~  238 (364)
                      .....+.++++||-.| +|. |..+..+++..  +.+|+++..++.. +.+    ...+...-+.....++.+.+. +++
T Consensus       105 ~~~~~~~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~  182 (277)
T 1o54_A          105 AMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDV  182 (277)
T ss_dssp             HHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSE
T ss_pred             HHHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCcc
Confidence            3567889999999999 565 88999999885  4689999766543 333    334542111111112222222 349


Q ss_pred             cEEEECCCCc-hhHHHHHhhccCCCEEEEEcc
Q 017901          239 DAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       239 D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+|+.....+ ..+..+.++|+++|+++....
T Consensus       183 D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          183 DALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             EEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             CEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            9999877665 578899999999999998864

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.79  E-value=7.5e-05  Score=65.85  Aligned_cols=98  Identities=16%  Similarity=0.209  Sum_probs=71.0

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCce--eeeCCChhHHHHhcCCccEE
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQ--AVDYSSKDIELAIKGKFDAV  241 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~--v~~~~~~~~~~~i~g~~D~v  241 (364)
                      .+++++|++||..| +|..|+.++.+|+..|++|+++..+++. +.+    .+.|.+.  ++..+..++.   .+.+|+|
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~---d~~FDvV  192 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID---GLEFDVL  192 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG---GCCCSEE
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC---CCCcCEE
Confidence            46889999999999 7877788888888889999999877664 443    3445432  2233333332   2349999


Q ss_pred             EECCCCc---hhHHHHHhhccCCCEEEEEccC
Q 017901          242 LDTIGAP---ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~---~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.+...+   ..+..+.+.|+|||+++.....
T Consensus       193 ~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          193 MVAALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             EECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             EECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            9765543   4788999999999999987643

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.73  E-value=0.00026  Score=53.18  Aligned_cols=94  Identities=21%  Similarity=0.256  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCCch
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~~~  249 (364)
                      .+.+++|.|+ |.+|..+++.+...| .+|+++.++.+. +.+...+... ..|..+. ++.+.+.+ +|+||+|+|...
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~d~vi~~~~~~~   81 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGG-FDAVISAAPFFL   81 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTT-CSEEEECSCGGG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcC-CCEEEECCCchh
Confidence            3568999997 999999999999999 788888887665 4455556543 2344443 34444446 999999998764


Q ss_pred             hHHHHHhhccCCCEEEEEcc
Q 017901          250 TERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .......+.+.+-.++.+..
T Consensus        82 ~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           82 TPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             HHHHHHHHHHTTCEEECCCS
T ss_pred             hHHHHHHHHHhCCCEEEecC
Confidence            44444455566666665543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.68  E-value=0.00041  Score=61.54  Aligned_cols=92  Identities=21%  Similarity=0.265  Sum_probs=70.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~  251 (364)
                      -.|++++|.| .|.+|..+++.++.+|++|++..++.+. +.+.++|+. .++.  .++.+.+.+ .|+|+.+++..-.-
T Consensus       153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-~~~~--~~l~~~l~~-aDvVi~~~p~~~i~  227 (293)
T 3d4o_A          153 IHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGME-PFHI--SKAAQELRD-VDVCINTIPALVVT  227 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSE-EEEG--GGHHHHTTT-CSEEEECCSSCCBC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCe-ecCh--hhHHHHhcC-CCEEEECCChHHhC
Confidence            4689999999 8999999999999999999998877654 455677765 3222  234444555 99999999865223


Q ss_pred             HHHHhhccCCCEEEEEcc
Q 017901          252 RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~  269 (364)
                      ...+..+++++.++.++.
T Consensus       228 ~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          228 ANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             HHHHHHSCTTCEEEECSS
T ss_pred             HHHHHhcCCCCEEEEecC
Confidence            467788999999999974

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.67  E-value=0.00013  Score=58.21  Aligned_cols=96  Identities=13%  Similarity=0.092  Sum_probs=63.8

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceee-eCCChhHHHH--hcCCccEEEECC
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAV-DYSSKDIELA--IKGKFDAVLDTI  245 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~-~~~~~~~~~~--i~g~~D~vid~~  245 (364)
                      ...++++|+|.| +|.+|..+++.++..|.+|+++.+++++ +.++ +.|...+. +..+.+....  +.+ +|+||.|+
T Consensus        15 ~~~~~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~-ad~Vi~~~   92 (155)
T 2g1u_A           15 KKQKSKYIVIFG-CGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEK-ADMVFAFT   92 (155)
T ss_dssp             --CCCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGG-CSEEEECS
T ss_pred             cccCCCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCccc-CCEEEEEe
Confidence            346788999999 7999999999999999999999877654 4444 56654322 2223232222  335 99999999


Q ss_pred             CCchhHHHHHhhccC-CC--EEEEEc
Q 017901          246 GAPETERLGLNFLKR-GG--HYMTLH  268 (364)
Q Consensus       246 g~~~~~~~~~~~l~~-~G--~~v~~g  268 (364)
                      +.......+...++. +|  +++...
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~iv~~~  118 (155)
T 2g1u_A           93 NDDSTNFFISMNARYMFNVENVIARV  118 (155)
T ss_dssp             SCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred             CCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence            987555555555554 33  554443

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.54  E-value=0.0003  Score=65.06  Aligned_cols=101  Identities=16%  Similarity=0.067  Sum_probs=75.3

Q ss_pred             HHHHHHHhc-ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCcc
Q 017901          162 AWRALKCAA-RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       162 a~~~l~~~~-~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D  239 (364)
                      .+.++.+.. ..-.|++|.|.| .|.+|..+++.++.+|++|+++.++... ..+...|+..+      ++.+.+.. .|
T Consensus       197 lldgi~ratg~~L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~------sL~eal~~-AD  268 (436)
T 3h9u_A          197 LVDGIKRATDVMIAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL------LVEDVVEE-AH  268 (436)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------CHHHHTTT-CS
T ss_pred             HHHHHHHhcCCcccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec------CHHHHHhh-CC
Confidence            344443322 234689999999 8999999999999999999998776544 44566676421      35555555 99


Q ss_pred             EEEECCCCchhHH-HHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPETER-LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~  270 (364)
                      +++.+.+....+. ..+..|++++.++.+|..
T Consensus       269 VVilt~gt~~iI~~e~l~~MK~gAIVINvgRg  300 (436)
T 3h9u_A          269 IFVTTTGNDDIITSEHFPRMRDDAIVCNIGHF  300 (436)
T ss_dssp             EEEECSSCSCSBCTTTGGGCCTTEEEEECSSS
T ss_pred             EEEECCCCcCccCHHHHhhcCCCcEEEEeCCC
Confidence            9999998764444 788999999999999854

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.52  E-value=0.00046  Score=61.47  Aligned_cols=92  Identities=20%  Similarity=0.257  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~  251 (364)
                      -.|++++|.| .|.+|..+++.++.+|++|++..++.+. +.+.++|+. +++.  .++.+.+.+ +|+|+.+++..-.-
T Consensus       155 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~~l~~~l~~-aDvVi~~~p~~~i~  229 (300)
T 2rir_A          155 IHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHT--DELKEHVKD-IDICINTIPSMILN  229 (300)
T ss_dssp             STTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEG--GGHHHHSTT-CSEEEECCSSCCBC
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEch--hhHHHHhhC-CCEEEECCChhhhC
Confidence            4689999999 7999999999999999999999877654 445566764 3322  244455555 99999999975222


Q ss_pred             HHHHhhccCCCEEEEEcc
Q 017901          252 RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~  269 (364)
                      ...+..+++++.++.++.
T Consensus       230 ~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          230 QTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             HHHHTTSCTTCEEEECSS
T ss_pred             HHHHHhCCCCCEEEEEeC
Confidence            457788999999999974

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.51  E-value=0.00043  Score=60.04  Aligned_cols=97  Identities=24%  Similarity=0.298  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .|++++|+||++++|..+++.+...|++|+.+.++++.  +...+++...   ..|..+.+ .   .+.+.   |++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999887654  3344444321   22334432 2   22221   559999


Q ss_pred             EECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          242 LDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +++.|...                         ..+.+...++++|++|.++..
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  140 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV  140 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence            99988521                         124555667778999998764

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.50  E-value=0.00088  Score=62.01  Aligned_cols=101  Identities=20%  Similarity=0.121  Sum_probs=75.4

Q ss_pred             HHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCcc
Q 017901          162 AWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       162 a~~~l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D  239 (364)
                      .+.++.+. ...-.|++++|.| .|.+|..+++.++.+|++|+++.++... ..+...|+. +.     ++.+.+.. .|
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~-vv-----~LeElL~~-AD  304 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFE-VV-----TLDDAAST-AD  304 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE-EC-----CHHHHGGG-CS
T ss_pred             HHHHHHHhcCCcccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCce-ec-----cHHHHHhh-CC
Confidence            44555333 2356899999999 8999999999999999999998665543 344556654 22     23444545 99


Q ss_pred             EEEECCCCchhH-HHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPETE-RLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+.+.|....+ ...+..|++++.++.+|..
T Consensus       305 IVv~atgt~~lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          305 IVVTTTGNKDVITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             EEEECCSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred             EEEECCCCccccCHHHHhcCCCCeEEEEcCCC
Confidence            999999876444 5889999999999999864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.50  E-value=0.0034  Score=54.52  Aligned_cols=74  Identities=19%  Similarity=0.255  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCcee-eeCCChh----HHHHhc---CCccEEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA-VDYSSKD----IELAIK---GKFDAVLD  243 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v-~~~~~~~----~~~~i~---g~~D~vid  243 (364)
                      .++++||+||++++|.++++.+...|++|+.+.++++.  +.+.+.++..+ .|..+.+    +.+.+.   |++|++|.
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            46789999999999999999999999999999887654  44556664322 3444432    222222   56999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus       106 nAg~  109 (260)
T 3gem_A          106 NASE  109 (260)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9884

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.47  E-value=0.00042  Score=65.10  Aligned_cols=100  Identities=17%  Similarity=0.111  Sum_probs=72.2

Q ss_pred             HHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccE
Q 017901          163 WRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDA  240 (364)
Q Consensus       163 ~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~  240 (364)
                      +.++.+.... -.|++++|.| .|.+|.++++.++..|++|+++.+++.. ..+...|++ +.+     ..+.... +|+
T Consensus       252 ~dgi~r~tg~~L~GKtVvVtG-aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~-----lee~~~~-aDv  323 (488)
T 3ond_A          252 PDGLMRATDVMIAGKVAVVAG-YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLT-----LEDVVSE-ADI  323 (488)
T ss_dssp             HHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECC-----GGGTTTT-CSE
T ss_pred             HHHHHHHcCCcccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCC-----HHHHHHh-cCE
Confidence            3344333333 4799999999 6799999999999999999988766544 455566653 221     1122224 999


Q ss_pred             EEECCCCchhHH-HHHhhccCCCEEEEEccC
Q 017901          241 VLDTIGAPETER-LGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       241 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~  270 (364)
                      ++++.|....+. ..++.+++++.++.+|..
T Consensus       324 Vi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          324 FVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             EEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             EEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            999999765554 488999999999999854

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.47  E-value=0.00076  Score=55.22  Aligned_cols=92  Identities=17%  Similarity=0.128  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHHh---cCCccEEEECCCCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELAI---KGKFDAVLDTIGAP  248 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~i---~g~~D~vid~~g~~  248 (364)
                      +++++|.| .|.+|..+++.++.. |.+|+++.+++++ +.+++.|...+. |..+.+.....   .+ +|+||.|+++.
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~-ad~vi~~~~~~  116 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGH-VKLVLLAMPHH  116 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCC-CCEEEECCSSH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCC-CCEEEEeCCCh
Confidence            66899999 899999999999998 9999999887765 667778876443 44444444443   35 99999999986


Q ss_pred             hhHHHHH---hhccCCCEEEEEc
Q 017901          249 ETERLGL---NFLKRGGHYMTLH  268 (364)
Q Consensus       249 ~~~~~~~---~~l~~~G~~v~~g  268 (364)
                      .....+.   +.+.+..+++...
T Consensus       117 ~~~~~~~~~~~~~~~~~~ii~~~  139 (183)
T 3c85_A          117 QGNQTALEQLQRRNYKGQIAAIA  139 (183)
T ss_dssp             HHHHHHHHHHHHTTCCSEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEE
Confidence            4433333   3444455777654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.41  E-value=0.001  Score=57.86  Aligned_cols=97  Identities=15%  Similarity=0.193  Sum_probs=72.0

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...+|+...+...+.+..---.|.+++|.|+++.+|..+++++...|++|+.+.+.                  +.++.+
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~------------------t~~L~~  200 (285)
T 3l07_A          139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF------------------TTDLKS  200 (285)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSSHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC------------------chhHHH
Confidence            34566666666666544333589999999977779999999999999998776432                  224455


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|++|.++|.+..+  -.+++++|..++.+|..
T Consensus       201 ~~~~-ADIVI~Avg~p~~I--~~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          201 HTTK-ADILIVAVGKPNFI--TADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             HHTT-CSEEEECCCCTTCB--CGGGSCTTCEEEECCCE
T ss_pred             hccc-CCEEEECCCCCCCC--CHHHcCCCcEEEEeccc
Confidence            5555 99999999987443  34678999999999865

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.38  E-value=0.0011  Score=57.66  Aligned_cols=97  Identities=19%  Similarity=0.207  Sum_probs=72.3

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...+|+.......|.+..---.|++++|.|.++.+|..+++++...|++|+.+.+..                  .++.+
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------------~~L~~  200 (286)
T 4a5o_A          139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------------RDLAD  200 (286)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------------SCHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------------cCHHH
Confidence            345666666666664443335899999999777899999999999999998874421                  23445


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|++|.++|.+..+  -.+++++|..++.+|..
T Consensus       201 ~~~~-ADIVI~Avg~p~~I--~~~~vk~GavVIDvgi~  235 (286)
T 4a5o_A          201 HVSR-ADLVVVAAGKPGLV--KGEWIKEGAIVIDVGIN  235 (286)
T ss_dssp             HHHT-CSEEEECCCCTTCB--CGGGSCTTCEEEECCSC
T ss_pred             Hhcc-CCEEEECCCCCCCC--CHHHcCCCeEEEEeccc
Confidence            5555 99999999987443  34678999999999865

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.36  E-value=0.0014  Score=54.96  Aligned_cols=91  Identities=13%  Similarity=0.188  Sum_probs=63.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChhHHHHhcCCccEEEECCCCc------
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAP------  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~~~~~i~g~~D~vid~~g~~------  248 (364)
                      +|+|+||+|.+|..+++.+...|.+|+++.++.+. ..+. .+...+ .|..+.+. +.+.+ +|+||.+.|..      
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-~~~~~-~d~vi~~ag~~~~~~~~   78 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-SDLSD-QNVVVDAYGISPDEAEK   78 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-HHHTT-CSEEEECCCSSTTTTTS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-hhhcC-CCEEEECCcCCccccch
Confidence            69999999999999999999999999999988665 2222 333321 23333333 44556 99999999874      


Q ss_pred             --hhHHHHHhhccCC--CEEEEEccC
Q 017901          249 --ETERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       249 --~~~~~~~~~l~~~--G~~v~~g~~  270 (364)
                        ......++.++..  +++|.++..
T Consensus        79 ~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           79 HVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             HHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEecc
Confidence              1235666666654  688888653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.36  E-value=0.0019  Score=55.93  Aligned_cols=97  Identities=14%  Similarity=0.227  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce--e--eeCCChh-H---HHHhc---
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ--A--VDYSSKD-I---ELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~--v--~~~~~~~-~---~~~i~---  235 (364)
                      .|++++|+||+|  ++|.+.++.+...|++|+.+.++++. +    .+.+.+...  .  .|.++.+ .   .+.+.   
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            588999999776  89999999999999999999887653 2    234444322  2  3444432 2   22222   


Q ss_pred             CCccEEEECCCCch--------------h---------------HHHHHhhccCCCEEEEEccC
Q 017901          236 GKFDAVLDTIGAPE--------------T---------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       236 g~~D~vid~~g~~~--------------~---------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |++|+++++.|...              .               ...+...++.+|++|.++..
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~  148 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL  148 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence            66999999988410              0               12344567788999998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.36  E-value=0.0018  Score=56.32  Aligned_cols=97  Identities=15%  Similarity=0.246  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc--e--eeeCCChh----HHHHhc---
Q 017901          174 EGQRLLVLGGGGA--VGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE--Q--AVDYSSKD----IELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~--~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~--~--v~~~~~~~----~~~~i~---  235 (364)
                      .|++++|+||+|.  +|..+++.+...|++|+.+.++++. +.    ..+.+..  .  ..|..+.+    +.+.+.   
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            4789999999955  9999999999999999999877643 22    2333321  1  22433332    222222   


Q ss_pred             CCccEEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          236 GKFDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       236 g~~D~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |++|+++.+.|...                             ..+.+...++++|++|.++..
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  149 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL  149 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence            55999999988421                             124556677778999999864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.35  E-value=0.0017  Score=57.05  Aligned_cols=97  Identities=22%  Similarity=0.327  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H----HHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D----RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~----~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++...  +    .+.+.+... .  .|..+.+ +   .+.+.   |+
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999876532  1    234445432 2  2333332 2   22221   45


Q ss_pred             ccEEEECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|++.|...                         .++.+.+.++.+|++|.++..
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  165 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  165 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence            999999988421                         124556666678999999864

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.33  E-value=0.0043  Score=51.71  Aligned_cols=99  Identities=18%  Similarity=0.177  Sum_probs=68.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc-e--eeeCCChhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-Q--AVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~-~--v~~~~~~~~~~~i~g~~D  239 (364)
                      ....+.++++||-.| +|. |..++.+++. +.+|+++..+++. +.    ++..|.. .  ++..+..+..... +++|
T Consensus        49 ~~l~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D  124 (204)
T 3njr_A           49 AALAPRRGELLWDIG-GGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPE  124 (204)
T ss_dssp             HHHCCCTTCEEEEET-CTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCS
T ss_pred             HhcCCCCCCEEEEec-CCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCC
Confidence            556788999999999 554 8899999988 8999999777653 33    3445554 2  3333322211122 2399


Q ss_pred             EEEECCCCch-hHHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPE-TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+...+... .+..+.+.|++||+++.....
T Consensus       125 ~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  156 (204)
T 3njr_A          125 AVFIGGGGSQALYDRLWEWLAPGTRIVANAVT  156 (204)
T ss_dssp             EEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred             EEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence            9997765432 678999999999999987643

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.33  E-value=0.001  Score=57.57  Aligned_cols=95  Identities=13%  Similarity=0.144  Sum_probs=71.8

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...||+.......+.+..  -.|.+++|.|+++.+|..+++++...|++|+.+.+.                  +.++.+
T Consensus       130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~------------------t~~L~~  189 (276)
T 3ngx_A          130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK------------------TKDIGS  189 (276)
T ss_dssp             SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSCHHH
T ss_pred             CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC------------------cccHHH
Confidence            345666666677775554  689999999977789999999999999999877542                  233444


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|++|.++|.+..+.  -+++++|..++.+|..
T Consensus       190 ~~~~-ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  224 (276)
T 3ngx_A          190 MTRS-SKIVVVAVGRPGFLN--REMVTPGSVVIDVGIN  224 (276)
T ss_dssp             HHHH-SSEEEECSSCTTCBC--GGGCCTTCEEEECCCE
T ss_pred             hhcc-CCEEEECCCCCcccc--HhhccCCcEEEEeccC
Confidence            4544 999999999874433  3668999999999865

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.32  E-value=0.0013  Score=57.29  Aligned_cols=74  Identities=20%  Similarity=0.306  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .|+++||+||++++|..+++.+...|++|+.+.++++.  +...+++... .  .|..+.+ .   .+.+.   |++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999887654  4455666432 2  2334432 2   22221   559999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus       106 vnnAg~  111 (266)
T 3grp_A          106 VNNAGI  111 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.32  E-value=0.0015  Score=57.27  Aligned_cols=96  Identities=20%  Similarity=0.261  Sum_probs=71.5

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH--
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE--  231 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~--  231 (364)
                      ..+|+...+...|.+..---.|.+++|.|+++.+|..+++++...|++|+.+.+...                  ++.  
T Consensus       144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------------~l~l~  205 (300)
T 4a26_A          144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------------TEDMI  205 (300)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------------HHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------------Cchhh
Confidence            356666666666655444458999999997777999999999999999888765222                  222  


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.++. +|+||.++|.+..+.  .+++++|..++.+|..
T Consensus       206 ~~~~~-ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          206 DYLRT-ADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHHT-CSEEEECSCCTTCBC--GGGSCTTCEEEECCCE
T ss_pred             hhhcc-CCEEEECCCCCCCCc--HHhcCCCcEEEEEecc
Confidence            44545 999999999874433  3668999999999864

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.31  E-value=0.003  Score=49.20  Aligned_cols=95  Identities=14%  Similarity=0.035  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHHhc-CCccEEEECCCCchh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPET  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~i~-g~~D~vid~~g~~~~  250 (364)
                      -.++++|.| .|.+|..+++.++..|..|+++.+++++ +.+++.|...+. |..+.+...... .++|+++.+++....
T Consensus         6 ~~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~   84 (140)
T 3fwz_A            6 ICNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYE   84 (140)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHH
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHH
Confidence            346799999 7999999999999999999999888776 677778876433 344444444332 239999999998632


Q ss_pred             H---HHHHhhccCCCEEEEEcc
Q 017901          251 E---RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ~---~~~~~~l~~~G~~v~~g~  269 (364)
                      .   -...+.+.+..+++....
T Consensus        85 n~~~~~~a~~~~~~~~iiar~~  106 (140)
T 3fwz_A           85 AGEIVASARAKNPDIEIIARAH  106 (140)
T ss_dssp             HHHHHHHHHHHCSSSEEEEEES
T ss_pred             HHHHHHHHHHHCCCCeEEEEEC
Confidence            2   234555667778776654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.29  E-value=0.00087  Score=57.16  Aligned_cols=95  Identities=18%  Similarity=0.213  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC-cee-eeCCChhHHHHhcCCccEEEECCCCch-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA-EQA-VDYSSKDIELAIKGKFDAVLDTIGAPE-  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~-~~v-~~~~~~~~~~~i~g~~D~vid~~g~~~-  249 (364)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++.++.+. ..+.+.++ ..+ .|.. ..+.+.+.+ +|+||.+.|... 
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~-~D~vi~~ag~~~~   97 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHAFAS-IDAVVFAAGSGPH   97 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGGGTT-CSEEEECCCCCTT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHHHcC-CCEEEECCCCCCC
Confidence            47899999999999999999999999999999988765 55555566 322 2333 334444445 999999998531 


Q ss_pred             ------------hHHHHHhhcc--CCCEEEEEccC
Q 017901          250 ------------TERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       250 ------------~~~~~~~~l~--~~G~~v~~g~~  270 (364)
                                  .....++.++  ..+++|.++..
T Consensus        98 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  132 (236)
T 3e8x_A           98 TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV  132 (236)
T ss_dssp             SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred             CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence                        1223333333  23689988764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.29  E-value=0.0024  Score=56.44  Aligned_cols=97  Identities=16%  Similarity=0.279  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H----HHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D----RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~----~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+.  +    .+.+.+... .  .|..+.+ .   .+.+.   |+
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999876542  2    223344332 2  2444432 2   22221   55


Q ss_pred             ccEEEECCCCc---h-----------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAP---E-----------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~---~-----------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|.+.|..   .                       ..+.++..++.+|++|.++..
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~  184 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI  184 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence            99999998742   0                       124556677788999998764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.28  E-value=0.0013  Score=57.67  Aligned_cols=74  Identities=27%  Similarity=0.394  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++++.  +...+++... .  .|..+.+ .   .+.+.   |++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999887654  3445555431 2  2444432 2   22221   559999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |++.|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.26  E-value=0.0016  Score=56.68  Aligned_cols=96  Identities=20%  Similarity=0.264  Sum_probs=71.7

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      ..+|+...+...|.+...--.|++++|.|+++.+|..+++++...|++|+.+.+.                  +.++.+.
T Consensus       139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~------------------t~~L~~~  200 (285)
T 3p2o_A          139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK------------------TKDLSLY  200 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSCHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC------------------chhHHHH
Confidence            3566666666666544334589999999977779999999999999998877542                  1234455


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|++|.++|.+..+  -.+++++|..++.+|..
T Consensus       201 ~~~-ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~  234 (285)
T 3p2o_A          201 TRQ-ADLIIVAAGCVNLL--RSDMVKEGVIVVDVGIN  234 (285)
T ss_dssp             HTT-CSEEEECSSCTTCB--CGGGSCTTEEEEECCCE
T ss_pred             hhc-CCEEEECCCCCCcC--CHHHcCCCeEEEEeccC
Confidence            555 99999999987443  34778999999999865

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.24  E-value=0.0012  Score=57.74  Aligned_cols=75  Identities=20%  Similarity=0.306  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-ee--eeCCChh-H---HHHhc---CCccE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSKD-I---ELAIK---GKFDA  240 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~D~  240 (364)
                      ..++++||+||++++|.++++.+...|++|+.+.++.+.  +...+++.. ..  .|..+.+ .   .+.+.   |++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            357899999999999999999999999999999887654  444555432 12  2444432 2   22221   56999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999885

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=97.23  E-value=0.002  Score=56.56  Aligned_cols=96  Identities=16%  Similarity=0.213  Sum_probs=70.7

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      .+||+.......|.+..---.|.+++|.|++..+|.-+++++...|++|+.+.+.                  +.++.+.
T Consensus       144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~------------------t~~L~~~  205 (301)
T 1a4i_A          144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK------------------TAHLDEE  205 (301)
T ss_dssp             CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSSHHHH
T ss_pred             ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC------------------cccHHHH
Confidence            4466655555555433323478999999966679999999999999998877422                  2345566


Q ss_pred             hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++. +|+||.++|.+..  ---+++++|..+|.+|..
T Consensus       206 ~~~-ADIVI~Avg~p~~--I~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          206 VNK-GDILVVATGQPEM--VKGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             HTT-CSEEEECCCCTTC--BCGGGSCTTCEEEECCCB
T ss_pred             hcc-CCEEEECCCCccc--CCHHHcCCCcEEEEccCC
Confidence            665 9999999999843  334568999999999975

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.23  E-value=0.0035  Score=54.81  Aligned_cols=97  Identities=24%  Similarity=0.341  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH-----HHHHHcCCce-e--eeCCChh-HH---HHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-----DRVLAAGAEQ-A--VDYSSKD-IE---LAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~-----~~~~~~g~~~-v--~~~~~~~-~~---~~i~---g~  237 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++. +.     +.+.+.+... .  .|..+.+ +.   +.+.   |+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999885543 22     2234445432 2  2333332 22   2221   56


Q ss_pred             ccEEEECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|.+.|...                         ..+.+.+.++++|++|.++..
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~  167 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN  167 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence            999999988420                         134566677789999998754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.23  E-value=0.0062  Score=53.44  Aligned_cols=93  Identities=15%  Similarity=0.124  Sum_probs=63.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCCc----
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGAP----  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~~----  248 (364)
                      +|+|+||+|.+|..+++.+... |.+|+++.++... ..+...++.. ..|..+. ++...+.+ +|+||.+.|..    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~-~d~vi~~a~~~~~~~   80 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKG-MDTVVFIPSIIHPSF   80 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTT-CSEEEECCCCCCSHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-CCEEEEeCCCCccch
Confidence            5899999999999999998887 8999999987654 2223334432 2344444 34455557 99999998852    


Q ss_pred             ---hhHHHHHhhccCC--CEEEEEccC
Q 017901          249 ---ETERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       249 ---~~~~~~~~~l~~~--G~~v~~g~~  270 (364)
                         ......++.++..  +++|.++..
T Consensus        81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~  107 (289)
T 3e48_A           81 KRIPEVENLVYAAKQSGVAHIIFIGYY  107 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred             hhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence               1234555555544  478888754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.23  E-value=0.00098  Score=58.70  Aligned_cols=74  Identities=27%  Similarity=0.382  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHH---cCCc--ee--eeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLA---AGAE--QA--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~---~g~~--~v--~~~~~~~----~~~~i~---g~  237 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++++.  +...+   .+..  ..  .|..+.+    +.+.+.   |+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999887653  22222   2221  22  3444432    222222   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|++.|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.22  E-value=0.0022  Score=55.74  Aligned_cols=97  Identities=23%  Similarity=0.318  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-e--eeeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-Q--AVDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~--v~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .+++++|+||+|++|..+++.+...|++|+.+.++++.  +...+++.. .  ..|..+.+ +   .+.+.   |++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            46889999999999999999999999999999887654  333444322 1  12444432 2   22221   559999


Q ss_pred             EECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          242 LDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |++.|...                         ..+.+...++.+|++|.++..
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  138 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  138 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            99987421                         023344445447999999765

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.21  E-value=0.0015  Score=56.55  Aligned_cols=97  Identities=16%  Similarity=0.145  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChhH----HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKDI----ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~~----~~~i~---g~~  238 (364)
                      +|++++|+||++++|.+.++.+...|++|+.+.++++.     +.+++.|...   ..|.++.+-    .+.+.   |++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58899999999999999999999999999999887653     2345556542   234444322    22222   679


Q ss_pred             cEEEECCCCc-h---h----------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          239 DAVLDTIGAP-E---T----------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~-~---~----------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      |+++++.|.. .   .                      .+.+++.|.  .+|++|.++..
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~  145 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASI  145 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEech
Confidence            9999998831 0   1                      245555553  46899999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.20  E-value=0.0025  Score=54.97  Aligned_cols=74  Identities=23%  Similarity=0.385  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...+++... .  .|..+.+ +   .+.+.   |++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46889999999999999999999999999999887653  3334444321 1  2333332 2   22221   558999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |++.|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.20  E-value=0.0045  Score=54.80  Aligned_cols=97  Identities=20%  Similarity=0.316  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceee--eCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAV--DYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~--~~~~~~----~~~~i~---g~  237 (364)
                      .|+++||+||+|  ++|..+++.+...|++|+.+.++++.     +...+.+....+  |..+.+    +.+.+.   |+
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999886  99999999999999999999887642     223344433332  444432    222222   56


Q ss_pred             ccEEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|++.|...                             ..+.+...++++|++|.++..
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~  170 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY  170 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence            999999998531                             024455566778999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.19  E-value=0.0029  Score=55.21  Aligned_cols=97  Identities=22%  Similarity=0.295  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH-----HHHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-----DRVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~-----~~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++. +.     +.+.+.+... .  .|..+.+ .   .+.+.   |+
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999876543 21     2234445432 2  2434332 2   22221   56


Q ss_pred             ccEEEECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|++.|...                         ..+.+++.++++|++|.++..
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  154 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN  154 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence            999999988521                         135667778889999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.18  E-value=0.0016  Score=56.17  Aligned_cols=74  Identities=20%  Similarity=0.245  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCcee---eeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA---VDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v---~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++.+.  +...+++....   .|..+.+    +.+.+.   |++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            57899999999999999999999999999999887654  44455554321   2333332    222222   569999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |++.|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.17  E-value=0.0029  Score=54.87  Aligned_cols=97  Identities=20%  Similarity=0.314  Sum_probs=63.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH--H---HHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI--D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~--~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.+ +++.  +   .+.+.+... .  .|..+.+ .   .+.+.   |+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999998844 4332  1   223334321 2  2444432 2   22222   56


Q ss_pred             ccEEEECCCCc-h-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAP-E-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~-~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|.+.|.. .                         ..+.++..++++|++|.++..
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  145 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ  145 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence            99999998742 0                         024455566678999998754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.16  E-value=0.0016  Score=56.13  Aligned_cols=96  Identities=15%  Similarity=0.127  Sum_probs=64.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-e--eeCCChh----HHHHhc---CCccEEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-A--VDYSSKD----IELAIK---GKFDAVLD  243 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-v--~~~~~~~----~~~~i~---g~~D~vid  243 (364)
                      +++|||+||++++|.+.++.+...|++|+.+.++++. +.+.+.+... .  .|..+.+    +.+.+.   |++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3689999999999999999999999999999887664 4343333322 2  2334432    222222   66999999


Q ss_pred             CCCCchh-------------------------HHHHHhhc-cCCCEEEEEccC
Q 017901          244 TIGAPET-------------------------ERLGLNFL-KRGGHYMTLHGE  270 (364)
Q Consensus       244 ~~g~~~~-------------------------~~~~~~~l-~~~G~~v~~g~~  270 (364)
                      +.|....                         .+.+++.| +.+|++|.++..
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~  134 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAST  134 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeec
Confidence            9874210                         13344444 467999988764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.15  E-value=0.0042  Score=54.57  Aligned_cols=97  Identities=21%  Similarity=0.226  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC------------ccH-----HHHHHcCCce---eeeCCChh-H--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS------------KSI-----DRVLAAGAEQ---AVDYSSKD-I--  230 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~------------~~~-----~~~~~~g~~~---v~~~~~~~-~--  230 (364)
                      .|+++||+||++++|..+++.+...|++|+.+.++            .+.     ..+...+...   ..|..+.+ .  
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            57899999999999999999999999999998765            221     1223344322   22444432 2  


Q ss_pred             -HHHhc---CCccEEEECCCCch-----------------------hHHHHHhhccCCCEEEEEccC
Q 017901          231 -ELAIK---GKFDAVLDTIGAPE-----------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       231 -~~~i~---g~~D~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                       .+.+.   |++|++|.+.|...                       ..+.++..++.+|++|.++..
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  155 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence             22221   56999999988521                       124556667788999998764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.15  E-value=0.0041  Score=55.03  Aligned_cols=98  Identities=21%  Similarity=0.339  Sum_probs=66.2

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCcee--eeCCChh----HHHHhc---C
Q 017901          173 SEGQRLLVLGGGGA--VGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQA--VDYSSKD----IELAIK---G  236 (364)
Q Consensus       173 ~~g~~vli~g~~g~--~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v--~~~~~~~----~~~~i~---g  236 (364)
                      -.|+++||+||+|.  +|.++++.+...|++|+.+.++++. +    ...+.+....  .|..+.+    +.+.+.   |
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999865  9999999999999999999887542 2    2233343222  2444432    222222   5


Q ss_pred             CccEEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          237 KFDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|++|++.|...                             ..+.++..++++|++|.++..
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~  171 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY  171 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence            6999999998531                             124556667788999998764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.15  E-value=0.0055  Score=54.21  Aligned_cols=97  Identities=19%  Similarity=0.265  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc---H----HHHHHcCCcee---eeCCChh----HHHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---I----DRVLAAGAEQA---VDYSSKD----IELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~---~----~~~~~~g~~~v---~~~~~~~----~~~~i~---g  236 (364)
                      .|+++||+||++++|..+++.+...|++|+.+.++..   .    +.+.+.+....   .|..+.+    +.+.+.   |
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999998876522   1    22344454321   2333332    222222   5


Q ss_pred             CccEEEECCCCch--------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          237 KFDAVLDTIGAPE--------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|++|.+.|...                          ..+.++..++++|++|.++..
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~  187 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI  187 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence            6999999988421                          124556677888999999864

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.15  E-value=0.0031  Score=54.48  Aligned_cols=74  Identities=20%  Similarity=0.338  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHH---HHHcCCce-e--eeCCChh-HHHHhc------CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR---VLAAGAEQ-A--VDYSSKD-IELAIK------GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~---~~~~g~~~-v--~~~~~~~-~~~~i~------g~~D~  240 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++++.+.   +.+.+... .  .|..+.+ +...+.      |++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999999999999999999999999987665322   33334322 1  2444432 222222      45999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus        83 lv~~Ag~   89 (255)
T 2q2v_A           83 LVNNAGI   89 (255)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.14  E-value=0.0045  Score=53.79  Aligned_cols=97  Identities=19%  Similarity=0.323  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC-----Cc-ee--eeCCChh-HHH---Hhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG-----AE-QA--VDYSSKD-IEL---AIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g-----~~-~v--~~~~~~~-~~~---~i~---g  236 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...++.     .. ..  .|..+.+ +..   .+.   |
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999887553  2222221     11 11  2444432 222   221   4


Q ss_pred             CccEEEECCCCc--hh---------------HHHHHhhccC-----CCEEEEEccC
Q 017901          237 KFDAVLDTIGAP--ET---------------ERLGLNFLKR-----GGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~--~~---------------~~~~~~~l~~-----~G~~v~~g~~  270 (364)
                      ++|++|++.|..  ..               ...+++.++.     +|++|.++..
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  141 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence            599999999842  11               1334445543     5899988754

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.14  E-value=0.003  Score=54.91  Aligned_cols=99  Identities=18%  Similarity=0.289  Sum_probs=66.1

Q ss_pred             cCCCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCcee--eeCCChh----HHHHhc---
Q 017901          172 MSEGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQA--VDYSSKD----IELAIK---  235 (364)
Q Consensus       172 ~~~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v--~~~~~~~----~~~~i~---  235 (364)
                      ...++++||+||+  +++|..+++.+...|++|+.+.++++. +    ...+.+...+  .|..+.+    +.+.+.   
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4568999999988  999999999999999999999877543 2    2233343222  2334432    222222   


Q ss_pred             CCccEEEECCCCch------------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          236 GKFDAVLDTIGAPE------------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       236 g~~D~vid~~g~~~------------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |++|++|.+.|...                              ..+.++..++++|++|.++..
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  155 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYL  155 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECG
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecc
Confidence            56999999988421                              023455566678999988754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.13  E-value=0.0011  Score=56.12  Aligned_cols=84  Identities=24%  Similarity=0.362  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChh----HHHHhcCCccEEEECCCCch
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD----IELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~i~g~~D~vid~~g~~~  249 (364)
                      .+++++|+||++++|...++.+...|++|+.+.++.+            .|..+.+    +.+.+ |++|+++.+.|...
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------~D~~~~~~v~~~~~~~-g~id~lv~nAg~~~   71 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------LDISDEKSVYHYFETI-GAFDHLIVTAGSYA   71 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------CCTTCHHHHHHHHHHH-CSEEEEEECCCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------cCCCCHHHHHHHHHHh-CCCCEEEECCCCCC
Confidence            4678999999999999999999888999999877654            2233322    22222 45999999988420


Q ss_pred             --------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          250 --------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 --------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                                                ..+.+.+.++++|+++.++..
T Consensus        72 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~  118 (223)
T 3uce_A           72 PAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM  118 (223)
T ss_dssp             CCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             CCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence                                      134555667778999999854

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.13  E-value=0.0024  Score=53.70  Aligned_cols=91  Identities=21%  Similarity=0.233  Sum_probs=62.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChhHHHHhcCCccEEEECCCCc------
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAP------  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~~~~~i~g~~D~vid~~g~~------  248 (364)
                      +|+|+||+|.+|..+++.+...|.+|+++.++... ..+...+...+ .|..+.+. ..+.+ +|+||.+.|..      
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~-~d~vi~~ag~~~~~~~~   79 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-ADLDS-VDAVVDALSVPWGSGRG   79 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HHHTT-CSEEEECCCCCTTSSCT
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-hhccc-CCEEEECCccCCCcchh
Confidence            59999999999999999999999999999987664 32322343322 23333333 44446 99999999872      


Q ss_pred             ----hhHHHHHhhcc-CCCEEEEEcc
Q 017901          249 ----ETERLGLNFLK-RGGHYMTLHG  269 (364)
Q Consensus       249 ----~~~~~~~~~l~-~~G~~v~~g~  269 (364)
                          .....+++.++ .++++|.++.
T Consensus        80 ~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           80 YLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             HHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             hHHHHHHHHHHHHHHHcCCcEEEEec
Confidence                12345555554 3478888864

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.10  E-value=0.0016  Score=56.26  Aligned_cols=97  Identities=19%  Similarity=0.258  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCcee---eeCCChhH----HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQA---VDYSSKDI----ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v---~~~~~~~~----~~~i~---g~~  238 (364)
                      .|++++|+||++++|.+.++.+...|++|+.+.++++.     +.+.+.|.+..   .|.++++-    .+.+.   |++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            58999999999999999999999999999999887653     23445554422   23344322    22222   669


Q ss_pred             cEEEECCCCchh-------------------------HHHHHhhc---cCCCEEEEEccC
Q 017901          239 DAVLDTIGAPET-------------------------ERLGLNFL---KRGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~~-------------------------~~~~~~~l---~~~G~~v~~g~~  270 (364)
                      |+++++.|....                         .+.+++.|   ..+|++|.++..
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~  147 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL  147 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence            999999985311                         24556655   256899999865

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=97.09  E-value=0.002  Score=56.16  Aligned_cols=97  Identities=16%  Similarity=0.224  Sum_probs=70.7

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...||+.......+.+...--.|.+++|.|++..+|.-+++++...|++|+.+.+..                  .++.+
T Consensus       137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------------~~L~~  198 (288)
T 1b0a_A          137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------------KNLRH  198 (288)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------------SCHHH
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------------hhHHH
Confidence            345666655566664443335789999999766789999999999999998874322                  33444


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+||.++|.+..  ---+++++|..++.+|..
T Consensus       199 ~~~~-ADIVI~Avg~p~l--I~~~~vk~GavVIDVgi~  233 (288)
T 1b0a_A          199 HVEN-ADLLIVAVGKPGF--IPGDWIKEGAIVIDVGIN  233 (288)
T ss_dssp             HHHH-CSEEEECSCCTTC--BCTTTSCTTCEEEECCCE
T ss_pred             Hhcc-CCEEEECCCCcCc--CCHHHcCCCcEEEEccCC
Confidence            5554 9999999999843  233568999999999865

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.08  E-value=0.0023  Score=54.99  Aligned_cols=74  Identities=20%  Similarity=0.341  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCChh-HH---HHhc---CCccEEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSKD-IE---LAIK---GKFDAVLD  243 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~~-~~---~~i~---g~~D~vid  243 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++++.  +...++++.. ..|..+.+ +.   +.+.   |++|++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999887654  3334445322 23444432 22   2221   55999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        84 ~Ag~   87 (245)
T 1uls_A           84 YAGI   87 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=97.08  E-value=0.0026  Score=55.19  Aligned_cols=97  Identities=15%  Similarity=0.241  Sum_probs=70.8

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccHHHHHHcCCceeeeCCChhH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDI  230 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~  230 (364)
                      ...||+...+...+.+...--.|.+++|.|++..+|..+++++...  |++|+.+.+.                  +.++
T Consensus       136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~------------------t~~L  197 (281)
T 2c2x_A          136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG------------------TRDL  197 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT------------------CSCH
T ss_pred             CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc------------------hhHH
Confidence            3446666566666644432347899999996667899999999998  8998876332                  2345


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       231 ~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.++. +|++|.++|.+..  --.+++++|..++.+|..
T Consensus       198 ~~~~~~-ADIVI~Avg~p~~--I~~~~vk~GavVIDVgi~  234 (281)
T 2c2x_A          198 PALTRQ-ADIVVAAVGVAHL--LTADMVRPGAAVIDVGVS  234 (281)
T ss_dssp             HHHHTT-CSEEEECSCCTTC--BCGGGSCTTCEEEECCEE
T ss_pred             HHHHhh-CCEEEECCCCCcc--cCHHHcCCCcEEEEccCC
Confidence            556655 9999999999843  334668999999999865

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.08  E-value=0.00075  Score=60.04  Aligned_cols=116  Identities=16%  Similarity=0.202  Sum_probs=75.8

Q ss_pred             ccccchHHHHHHHHHHh--------cc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-
Q 017901          153 SAIPFAALTAWRALKCA--------AR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-  220 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~--------~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-  220 (364)
                      ..+||+...+...+.+.        .. --.|.+++|.|++..+|..+++++...|++|+.+.++..+  +....++.. 
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence            45577666666666442        22 2368899999965578999999999999999887665321  222222221 


Q ss_pred             eee---e-CCChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          221 QAV---D-YSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       221 ~v~---~-~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +..   . .+..++.+.++. +|+||.++|.+.. ----+++++|..++.+|.+
T Consensus       226 ~~~t~~~~t~~~~L~e~l~~-ADIVIsAtg~p~~-vI~~e~vk~GavVIDVgi~  277 (320)
T 1edz_A          226 HHVEDLGEYSEDLLKKCSLD-SDVVITGVPSENY-KFPTEYIKEGAVCINFACT  277 (320)
T ss_dssp             CEEEEEEECCHHHHHHHHHH-CSEEEECCCCTTC-CBCTTTSCTTEEEEECSSS
T ss_pred             ccccccccccHhHHHHHhcc-CCEEEECCCCCcc-eeCHHHcCCCeEEEEcCCC
Confidence            110   0 111566777766 9999999999732 1223457999899999865

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.05  E-value=0.0037  Score=54.46  Aligned_cols=97  Identities=20%  Similarity=0.296  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH-H----HHHHcCCce---eeeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI-D----RVLAAGAEQ---AVDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-~----~~~~~g~~~---v~~~~~~~----~~~~i~---g~  237 (364)
                      .++++||+||++++|.++++.+...|++|+.+.+ +++. +    .+...+...   ..|..+.+    +.+.+.   |+
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999889999998744 3332 2    233444332   22444432    222222   56


Q ss_pred             ccEEEECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|++.|...                         .++.+++.++.+|++|.++..
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            999999998420                         124556677778999998754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.05  E-value=0.005  Score=51.74  Aligned_cols=94  Identities=10%  Similarity=0.107  Sum_probs=63.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HcCCeEEEeeCCcc-H-HHHHHcCCc-eee--eCCCh-hHHHHhcCCccEEEECCCCc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKS-I-DRVLAAGAE-QAV--DYSSK-DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~-~~g~~vi~~~~~~~-~-~~~~~~g~~-~v~--~~~~~-~~~~~i~g~~D~vid~~g~~  248 (364)
                      ++++|+||+|.+|..+++.+. ..|++|+++.++++ . +.+...+.. .++  |..+. ++.+.+.+ +|++|.+.|..
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vv~~ag~~   84 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTN-AEVVFVGAMES   84 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTT-CSEEEESCCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcC-CCEEEEcCCCC
Confidence            469999999999999999888 89999999998766 4 333212221 222  44443 34444556 99999999974


Q ss_pred             hh-HHHHHhhccCC--CEEEEEccC
Q 017901          249 ET-ERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       249 ~~-~~~~~~~l~~~--G~~v~~g~~  270 (364)
                      +. ...+++.++..  +++|.++..
T Consensus        85 n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           85 GSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             ChhHHHHHHHHHhcCCCeEEEEeec
Confidence            11 44555555433  589888754

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.04  E-value=0.004  Score=55.24  Aligned_cols=75  Identities=24%  Similarity=0.414  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCce----eeeCCCh-h----HHHHhc---
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAEQ----AVDYSSK-D----IELAIK---  235 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~~----v~~~~~~-~----~~~~i~---  235 (364)
                      ..++++||+||++++|..+++.+...|++|+.++++...  +.+   .+.+...    ..|..+. +    +.+.+.   
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999988653  222   2333221    2344442 2    222222   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|++|.+.|.
T Consensus        90 g~iD~lv~nAg~  101 (311)
T 3o26_A           90 GKLDILVNNAGV  101 (311)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            459999999985

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.03  E-value=0.0052  Score=53.70  Aligned_cols=97  Identities=16%  Similarity=0.270  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH----HHH-HHcCCcee--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI----DRV-LAAGAEQA--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~-~~~g~~~v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+||+  |++|..+++.+...|++|+.+.++.+.    +.+ .+.+...+  .|..+.+ +   .+.+.   |+
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999998  999999999999999999999887641    222 22342222  3444432 2   22221   45


Q ss_pred             ccEEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|.+.|...                             ..+.+++.++++|++|.++..
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (275)
T 2pd4_A           85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYL  146 (275)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECG
T ss_pred             CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecc
Confidence            999999988421                             013445555557999998754

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.02  E-value=0.00083  Score=57.58  Aligned_cols=99  Identities=19%  Similarity=0.290  Sum_probs=65.8

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC-ceeeeCCChhHHHHh-c--CCccEEEECCC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA-EQAVDYSSKDIELAI-K--GKFDAVLDTIG  246 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~-~~v~~~~~~~~~~~i-~--g~~D~vid~~g  246 (364)
                      +-.|+++||+|+++++|.+.++.+...|++|+.+.++++. +......+ ....|.++.+..+.+ .  |++|+++++.|
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            3469999999999999999999999999999999876553 21111111 112344443322222 2  66999999998


Q ss_pred             Cchh-----------------------HHHHHhhcc-CCCEEEEEccC
Q 017901          247 APET-----------------------ERLGLNFLK-RGGHYMTLHGE  270 (364)
Q Consensus       247 ~~~~-----------------------~~~~~~~l~-~~G~~v~~g~~  270 (364)
                      ....                       .+.++..++ .+|++|.++..
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            5311                       244555664 57999999864

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.02  E-value=0.0037  Score=53.44  Aligned_cols=74  Identities=28%  Similarity=0.385  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCcee--eeCCCh-hHHHHhc--CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQA--VDYSSK-DIELAIK--GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~~v--~~~~~~-~~~~~i~--g~~D~vid~~g  246 (364)
                      ++++++|+|++|.+|..+++.+...|++|+++.++.+. + ...++....+  .|..+. ++...+.  +++|++|++.|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            57899999999999999999999999999999887653 2 3333322222  243343 2333332  45899999988


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        86 ~   86 (244)
T 3d3w_A           86 V   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            4

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.02  E-value=0.002  Score=55.34  Aligned_cols=74  Identities=22%  Similarity=0.335  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCcee---eeCCChhHHHHh-c-CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQA---VDYSSKDIELAI-K-GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~v---~~~~~~~~~~~i-~-g~~D~vid~~  245 (364)
                      .|++++|+||++++|.+.++.+...|++|+.+.+++..   +.+++.|....   .|..+++..+.+ . |++|+++++.
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            58999999999999999999999999999999776532   45666665432   233333222111 1 5699999999


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        88 Gi   89 (247)
T 4hp8_A           88 GI   89 (247)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.01  E-value=0.0025  Score=55.64  Aligned_cols=74  Identities=16%  Similarity=0.240  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++++.  +...+++...   ..|..+.+ .   .+.+.   |++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999877653  4445555432   23444432 2   22221   569999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      +++.|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.00  E-value=0.0028  Score=54.94  Aligned_cols=97  Identities=13%  Similarity=0.213  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH----HHHHHcCCce---eeeCCChh----HHHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D  239 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.    +.+.+.+...   ..|.++.+    +.+.+.   |++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            58899999999999999999999999999999876542    2334444332   23444432    222222   6799


Q ss_pred             EEEECCCCch---------h---------------HHHHHhhcc-CCCEEEEEccC
Q 017901          240 AVLDTIGAPE---------T---------------ERLGLNFLK-RGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~---------~---------------~~~~~~~l~-~~G~~v~~g~~  270 (364)
                      +++++.|...         .               .+.++..|+ .+|++|.++..
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            9999998521         1               244555554 47999999865

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.00  E-value=0.0027  Score=55.74  Aligned_cols=74  Identities=22%  Similarity=0.313  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .+++++|+||++++|.++++.+...|++|+.+.++++.  +...+++...   ..|..+.+ .   .+.+.   |++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999887654  3445555432   22444432 2   22221   569999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus       106 v~nAg~  111 (277)
T 4dqx_A          106 VNNAGF  111 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.99  E-value=0.0027  Score=55.04  Aligned_cols=74  Identities=23%  Similarity=0.325  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCChh-HH---HHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSKD-IE---LAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~~-~~---~~i~---g~~D~v  241 (364)
                      .++++||+||+|++|..+++.+...|++|+.+.++.+.  +...+++... .  .|..+.+ +.   +.+.   |++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999887654  3445555432 2  2444432 22   2221   459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.99  E-value=0.0038  Score=54.23  Aligned_cols=97  Identities=20%  Similarity=0.217  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCCh-hHH---HHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSK-DIE---LAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~-~~~---~~i~---g~  237 (364)
                      .+++++|+||+|.+|..+++.+.. .|++|+.+.++.+.  +.   +...+.. .+  .|..+. ++.   +.+.   |+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999998888 89999999887543  22   2333422 12  243333 222   2221   45


Q ss_pred             ccEEEECCCCc----------h---------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|.+.|..          .               .++.+.+.++++|++|.++..
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~  140 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  140 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECCh
Confidence            99999998742          1               123344555567899998764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.98  E-value=0.0022  Score=55.52  Aligned_cols=74  Identities=16%  Similarity=0.249  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-ee--eeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .+++++|+||++++|.++++.+...|++|+.+.++++.  +...+++.. ..  .|..+.+ .   .+.+.   |++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999877653  334444432 12  2444432 2   22221   569999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |++.|.
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.97  E-value=0.0025  Score=54.81  Aligned_cols=76  Identities=16%  Similarity=0.185  Sum_probs=52.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh-HHHHhc--CCccEEEE
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-IELAIK--GKFDAVLD  243 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~~~~i~--g~~D~vid  243 (364)
                      -.+++++||+||+|++|..+++.+...|++|+.+.++.+.  +...++....   ..|..+.+ +.+.+.  +++|++|.
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   90 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC   90 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            4578999999999999999999999999999999887654  3334444322   22333332 222222  35999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        91 ~Ag~   94 (249)
T 3f9i_A           91 NAGI   94 (249)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            9984

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.96  E-value=0.0059  Score=53.02  Aligned_cols=74  Identities=22%  Similarity=0.377  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH----HHH-HHcCCceee--eCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI----DRV-LAAGAEQAV--DYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~-~~~g~~~v~--~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+||+  |++|..+++.+...|++|+.+.++++.    +.+ .+.+....+  |..+.+ +   .+.+.   |+
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46889999998  999999999999999999999876531    222 222322232  444432 2   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        88 iD~lv~~Ag~   97 (265)
T 1qsg_A           88 FDGFVHSIGF   97 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.95  E-value=0.0042  Score=51.40  Aligned_cols=60  Identities=25%  Similarity=0.422  Sum_probs=43.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChh-HHHHhc--CCccEEEECCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIK--GKFDAVLDTIG  246 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~i~--g~~D~vid~~g  246 (364)
                      +++|+||+|.+|..+++.+. .|++|+++.++..         ....|..+.+ +.+.+.  +++|++|.+.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------DVTVDITNIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence            79999999999999999988 8999999988754         1123333332 222222  45899999988

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.94  E-value=0.0067  Score=52.54  Aligned_cols=74  Identities=22%  Similarity=0.430  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH----HHH-HHcCCcee--eeCCChh-HH---HHhc---CC
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI----DRV-LAAGAEQA--VDYSSKD-IE---LAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~-~~~g~~~v--~~~~~~~-~~---~~i~---g~  237 (364)
                      .+++++|+||+  |++|..+++.+...|++|+++.++++.    +.+ .+.+....  .|..+.+ +.   +.+.   |+
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46889999998  999999999998889999999887642    222 22332222  2444432 22   2221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        87 iD~lv~~Ag~   96 (261)
T 2wyu_A           87 LDYLVHAIAF   96 (261)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.94  E-value=0.0033  Score=54.40  Aligned_cols=74  Identities=24%  Similarity=0.290  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.++++.  +...+++...   ..|..+.+ +   .+.+.   |++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            46899999999999999999999999999999887664  3445555432   22333332 2   22221   459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999884

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.93  E-value=0.0046  Score=54.09  Aligned_cols=99  Identities=20%  Similarity=0.226  Sum_probs=67.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHHH----Hc-C--Cce--eeeCCChhHHHHh-
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRVL----AA-G--AEQ--AVDYSSKDIELAI-  234 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~~----~~-g--~~~--v~~~~~~~~~~~i-  234 (364)
                      ....+.++++||-.| +| .|..+..+++..  +.+|+++..++.. +.++    .. |  .+.  ++..+-.+.  .. 
T Consensus        93 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~--~~~  168 (280)
T 1i9g_A           93 HEGDIFPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--ELP  168 (280)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CCC
T ss_pred             HHcCCCCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc--CCC
Confidence            567789999999999 55 788899999875  5699999776653 3332    22 4  221  222221111  01 


Q ss_pred             cCCccEEEECCCCc-hhHHHHHhhccCCCEEEEEccC
Q 017901          235 KGKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       235 ~g~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.+|+|+.....+ ..+..+.+.|+++|+++.....
T Consensus       169 ~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  205 (280)
T 1i9g_A          169 DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVAT  205 (280)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred             CCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence            13499998876654 5788999999999999987643

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.93  E-value=0.0041  Score=48.31  Aligned_cols=92  Identities=21%  Similarity=0.139  Sum_probs=61.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChhHHHHhc-CCccEEEECCCCchhH
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKDIELAIK-GKFDAVLDTIGAPETE  251 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~~~~~i~-g~~D~vid~~g~~~~~  251 (364)
                      .++++|.| .|.+|..+++.+...|.+|+++.++++. +.+.+.+...+ .|..+.+...... .++|++|.+++....-
T Consensus         6 ~~~v~I~G-~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n   84 (141)
T 3llv_A            6 RYEYIVIG-SEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN   84 (141)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence            46799999 6999999999999999999999887765 66667776533 2444444444332 2399999999975322


Q ss_pred             H---HHHhhccCCCEEEEEc
Q 017901          252 R---LGLNFLKRGGHYMTLH  268 (364)
Q Consensus       252 ~---~~~~~l~~~G~~v~~g  268 (364)
                      .   ...+.+. ..+++...
T Consensus        85 ~~~~~~a~~~~-~~~iia~~  103 (141)
T 3llv_A           85 LKILKALRSVS-DVYAIVRV  103 (141)
T ss_dssp             HHHHHHHHHHC-CCCEEEEE
T ss_pred             HHHHHHHHHhC-CceEEEEE
Confidence            2   2333334 44555543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.93  E-value=0.0029  Score=54.51  Aligned_cols=74  Identities=27%  Similarity=0.341  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc---eeeeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE---QAVDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~---~v~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .|++++|+||++++|..+++.+...|++|+.+.++++.  +...+++..   ...|..+.+ .   .+.+.   |++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999887654  333333322   123444432 2   22222   569999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      +++.|.
T Consensus        88 v~nAg~   93 (248)
T 3op4_A           88 VNNAGI   93 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.92  E-value=0.0026  Score=54.97  Aligned_cols=74  Identities=19%  Similarity=0.346  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh-HHHHhc------CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-IELAIK------GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~~~~i~------g~~D~v  241 (364)
                      .+++++|+||+|++|..+++.+...|++|+.+.++++.  +...+++...   ..|..+.+ +...+.      |++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46889999999999999999999999999999887654  3344444221   22444432 222221      459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |++.|.
T Consensus        84 v~nAg~   89 (254)
T 1hdc_A           84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.92  E-value=0.0038  Score=54.25  Aligned_cols=97  Identities=15%  Similarity=0.237  Sum_probs=63.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HH---HHHcCCce---eeeCCChh----HHHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DR---VLAAGAEQ---AVDYSSKD----IELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~---~~~~g~~~---v~~~~~~~----~~~~i~---  235 (364)
                      .++++||+||++++|.++++.+...|++|+.+.+..+.     +.   +.+.+...   ..|..+.+    +.+.+.   
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999998664321     11   22234321   22444432    222222   


Q ss_pred             CCccEEEECCCCc----------hh---------------HHHHHhhccCCCEEEEEccC
Q 017901          236 GKFDAVLDTIGAP----------ET---------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       236 g~~D~vid~~g~~----------~~---------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |++|++|.+.|..          +.               .+.++..++++|++|.++..
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            5699999999831          01               23445566678999998764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.92  E-value=0.0078  Score=51.59  Aligned_cols=74  Identities=23%  Similarity=0.327  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC---cee--eeCCChh-HH---HHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA---EQA--VDYSSKD-IE---LAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~---~~v--~~~~~~~-~~---~~i~---g~~D  239 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++.+.  +...++..   -.+  .|..+.+ +.   +.+.   +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46889999999999999999999999999999887653  22333321   112  2333332 22   2221   4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        85 ~li~~Ag~   92 (251)
T 1zk4_A           85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.91  E-value=0.0055  Score=54.53  Aligned_cols=88  Identities=18%  Similarity=0.237  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch----
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~----  249 (364)
                      .|.++.|.| .|.+|...++.++.+|++|++..++.+.+.+.+.|+..+      ++.+.+.. .|+|+.++....    
T Consensus       141 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~------~l~ell~~-aDvV~l~~p~~~~t~~  212 (307)
T 1wwk_A          141 EGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFV------DLETLLKE-SDVVTIHVPLVESTYH  212 (307)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEEC------CHHHHHHH-CSEEEECCCCSTTTTT
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCcccc------CHHHHHhh-CCEEEEecCCChHHhh
Confidence            578999999 899999999999999999999987766556677776421      23333334 899999988542    


Q ss_pred             hH-HHHHhhccCCCEEEEEcc
Q 017901          250 TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~~-~~~~~~l~~~G~~v~~g~  269 (364)
                      .+ ...+..+++++.+|.++.
T Consensus       213 li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          213 LINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CBCHHHHHHSCTTCEEEECSC
T ss_pred             hcCHHHHhcCCCCeEEEECCC
Confidence            12 356788999999999875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.91  E-value=0.0011  Score=57.56  Aligned_cols=72  Identities=22%  Similarity=0.358  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChh----HHHHhc---CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD----IELAIK---GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~i~---g~~D~vid~~g  246 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.+++.....+.+  ....|..+.+    +.+.+.   |++|+++++.|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG   87 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEEL--FVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLG   87 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTT--EEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            68999999999999999999999999999999886543211111  1123444432    222222   66999999887


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        88 ~   88 (261)
T 4h15_A           88 G   88 (261)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.90  E-value=0.0062  Score=53.28  Aligned_cols=74  Identities=24%  Similarity=0.347  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCc-e--e--eeCCChh-HH---HHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAE-Q--A--VDYSSKD-IE---LAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~-~--v--~~~~~~~-~~---~~i~---g  236 (364)
                      .++++||+||+|++|..+++.+...|++|+++.++... +    .+++.+.. .  +  .|..+.+ +.   +.+.   +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999887543 2    23333421 1  1  2444432 22   2221   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus       111 ~iD~vi~~Ag~  121 (279)
T 1xg5_A          111 GVDICINNAGL  121 (279)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            59999999884

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.90  E-value=0.011  Score=51.61  Aligned_cols=74  Identities=18%  Similarity=0.341  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC--c-ee--eeCCChh-HHHHhc------CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA--E-QA--VDYSSKD-IELAIK------GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~--~-~v--~~~~~~~-~~~~i~------g~~D  239 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  ....+++.  . .+  .|..+.+ +...+.      +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46889999999999999999999999999999887553  33344432  1 12  2433332 222221      4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        95 ~li~~Ag~  102 (278)
T 2bgk_A           95 IMFGNVGV  102 (278)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999884

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.90  E-value=0.0026  Score=54.30  Aligned_cols=73  Identities=23%  Similarity=0.233  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-e--eeeCCChh-H---HHHhc---CCccEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-Q--AVDYSSKD-I---ELAIK---GKFDAVL  242 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~--v~~~~~~~-~---~~~i~---g~~D~vi  242 (364)
                      +++++|+||++++|..+++.+...|++|+.+.++++.  +...+++.. .  ..|..+.+ .   .+.+.   |++|++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            5789999999999999999999999999999887654  333333322 1  22444432 2   22221   5699999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            99885

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.89  E-value=0.0047  Score=55.15  Aligned_cols=89  Identities=15%  Similarity=0.104  Sum_probs=67.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      -.|.++.|.| .|.+|...++.++.+|++|++..++.+...+.+.|+...      ++.+.+.. .|+|+.++....   
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~------~l~ell~~-aDvVvl~~P~~~~t~  211 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAKAV------SLEELLKN-SDVISLHVTVSKDAK  211 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEEC------CHHHHHHH-CSEEEECCCCCTTSC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCceec------CHHHHHhh-CCEEEEeccCChHHH
Confidence            3578999999 899999999999999999999987766555667776521      23333334 899999988542   


Q ss_pred             -hH-HHHHhhccCCCEEEEEcc
Q 017901          250 -TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~  269 (364)
                       .+ ...+..+++++.+|.++.
T Consensus       212 ~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          212 PIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CSBCHHHHHHSCTTEEEEESSC
T ss_pred             HhhCHHHHhcCCCCCEEEECCC
Confidence             12 466788999999998874

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.89  E-value=0.0031  Score=55.45  Aligned_cols=74  Identities=27%  Similarity=0.324  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+.  +...+.+...   ..|..+.+    +.+.+.   |++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            47899999999999999999999999999999887654  3344454332   12433332    222221   569999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      +++.|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999984

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.88  E-value=0.014  Score=51.27  Aligned_cols=74  Identities=19%  Similarity=0.378  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH----HHH-HHcCCcee--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI----DRV-LAAGAEQA--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~-~~~g~~~v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .|++++|+||+  |++|..+++.+...|++|+++.++.+.    +.+ .+.+....  .|..+.+ +   .+.+.   |+
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  899999999999999999999887642    222 22332222  2444432 2   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       100 iD~lv~~Ag~  109 (285)
T 2p91_A          100 LDIIVHSIAY  109 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.88  E-value=0.0049  Score=53.04  Aligned_cols=74  Identities=16%  Similarity=0.274  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH--HHHHHcCCce---eeeCCChh-HHH---Hhc---CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI--DRVLAAGAEQ---AVDYSSKD-IEL---AIK---GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~--~~~~~~g~~~---v~~~~~~~-~~~---~i~---g~~D~  240 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++. +.  +.+++.+...   ..|..+.+ +..   .+.   |++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            468899999999999999999999999999998876 43  2344555331   12444432 222   221   45999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|++.|.
T Consensus        86 lv~nAg~   92 (249)
T 2ew8_A           86 LVNNAGI   92 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.86  E-value=0.0062  Score=54.87  Aligned_cols=88  Identities=16%  Similarity=0.050  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|+++.|.| .|.+|...++.++.+|.+|++..+......+.+.|+...      ++.+.+.. .|+|+.++.....   
T Consensus       164 ~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~------~l~ell~~-aDvV~l~~P~t~~t~~  235 (335)
T 2g76_A          164 NGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQL------PLEEIWPL-CDFITVHTPLLPSTTG  235 (335)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEEC------CHHHHGGG-CSEEEECCCCCTTTTT
T ss_pred             CcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeC------CHHHHHhc-CCEEEEecCCCHHHHH
Confidence            578999999 899999999999999999999877665555667776421      34444445 9999999886521   


Q ss_pred             -H-HHHHhhccCCCEEEEEcc
Q 017901          251 -E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~  269 (364)
                       + ...+..+++++.+|.++.
T Consensus       236 li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          236 LLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             SBCHHHHTTSCTTEEEEECSC
T ss_pred             hhCHHHHhhCCCCcEEEECCC
Confidence             2 367789999999999875

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.85  E-value=0.0043  Score=54.03  Aligned_cols=97  Identities=20%  Similarity=0.317  Sum_probs=64.4

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCCccH--H-HHHHcCCc-e--eeeCCChh-H---HHHhc---C--
Q 017901          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKSI--D-RVLAAGAE-Q--AVDYSSKD-I---ELAIK---G--  236 (364)
Q Consensus       174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~-~~~~~g~~-~--v~~~~~~~-~---~~~i~---g--  236 (364)
                      .+++++|+|+  ++++|..+++.+...|++|+.+.++.+.  + ...+++.. .  ..|..+.+ +   .+.+.   |  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999998  8999999999999999999999876542  2 23334322 1  23444432 2   22221   4  


Q ss_pred             -CccEEEECCCCch------------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          237 -KFDAVLDTIGAPE------------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       237 -~~D~vid~~g~~~------------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                       ++|++|.+.|...                              ..+.+++.++++|++|.++..
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~  150 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFD  150 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECC
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCc
Confidence             6999999988421                              023445556667999988753

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.85  E-value=0.0012  Score=55.59  Aligned_cols=91  Identities=12%  Similarity=0.237  Sum_probs=61.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-eeeCCC-h-hHHHHhcCCccEEEECCCCch---
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-AVDYSS-K-DIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~-~-~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      +|+|+||+|.+|..+++.+...|.+|+++.++... ...  .+... ..|..+ . ++.+.+.+ +|+||.+.|...   
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~-~d~vi~~ag~~~~~~   78 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHG-MDAIINVSGSGGKSL   78 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTT-CSEEEECCCCTTSSC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcC-CCEEEECCcCCCCCc
Confidence            69999999999999999999999999999987654 211  12221 123444 3 33444446 999999998641   


Q ss_pred             ------hHHHHHhhccCC--CEEEEEccC
Q 017901          250 ------TERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       250 ------~~~~~~~~l~~~--G~~v~~g~~  270 (364)
                            .....++.++..  +++|.++..
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  107 (219)
T 3dqp_A           79 LKVDLYGAVKLMQAAEKAEVKRFILLSTI  107 (219)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             EeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence                  133444444433  589988764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.85  E-value=0.0045  Score=53.62  Aligned_cols=74  Identities=22%  Similarity=0.337  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCCh-hHHHHhc------CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSK-DIELAIK------GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~-~~~~~i~------g~~D~v  241 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++...  +...+++... +  .|..+. ++.+.+.      |++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            46899999999999999999999999999999876543  3445555331 2  243433 2222221      459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        91 i~~Ag~   96 (265)
T 2o23_A           91 VNCAGI   96 (265)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999884

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.84  E-value=0.00089  Score=55.75  Aligned_cols=143  Identities=17%  Similarity=0.157  Sum_probs=81.3

Q ss_pred             CCCCCEEEEecCCCCCCCcceeEEe-ecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901          110 LTVGQEVFGALHPTAVRGTYADYAV-LSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (364)
Q Consensus       110 ~~~Gd~V~~~~~~~~~~g~~~~~~~-~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G  188 (364)
                      ++.|+.+....       .|.+|.. .+....+.+++++.+..... +. .......+.  ..++++++||-.| +|. |
T Consensus         6 ~~~~~~~~~~p-------~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~-~~~~~~~l~--~~~~~~~~vLDiG-~G~-G   72 (205)
T 3grz_A            6 INLSRHLAIVP-------EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QT-TQLAMLGIE--RAMVKPLTVADVG-TGS-G   72 (205)
T ss_dssp             EEEETTEEEEE-------TTCCCCCSSTTCEEEEESCC-----CCH-HH-HHHHHHHHH--HHCSSCCEEEEET-CTT-S
T ss_pred             EEECCcEEEec-------cccccccCCCCceeEEecCCcccCCCCC-cc-HHHHHHHHH--HhccCCCEEEEEC-CCC-C
Confidence            45566555543       3666666 56677777877766554321 11 111122221  1257889999998 554 7


Q ss_pred             HHHHHHHHHcCC-eEEEeeCCccH-HHH----HHcCCce--eeeCCChhHHHHhcCCccEEEECCCCc---hhHHHHHhh
Q 017901          189 FAAVQFSVASGC-HVSATCGSKSI-DRV----LAAGAEQ--AVDYSSKDIELAIKGKFDAVLDTIGAP---ETERLGLNF  257 (364)
Q Consensus       189 ~~~~~~a~~~g~-~vi~~~~~~~~-~~~----~~~g~~~--v~~~~~~~~~~~i~g~~D~vid~~g~~---~~~~~~~~~  257 (364)
                      ..+..+++. +. +|+++..++.. +.+    ...+...  ++..+..+   ...+++|+|+....-.   ..+..+.+.
T Consensus        73 ~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~fD~i~~~~~~~~~~~~l~~~~~~  148 (205)
T 3grz_A           73 ILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA---DVDGKFDLIVANILAEILLDLIPQLDSH  148 (205)
T ss_dssp             HHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT---TCCSCEEEEEEESCHHHHHHHGGGSGGG
T ss_pred             HHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc---cCCCCceEEEECCcHHHHHHHHHHHHHh
Confidence            777777764 55 89999776653 333    3345432  22222211   2224599999865543   235677789


Q ss_pred             ccCCCEEEEEcc
Q 017901          258 LKRGGHYMTLHG  269 (364)
Q Consensus       258 l~~~G~~v~~g~  269 (364)
                      |+++|+++....
T Consensus       149 L~~gG~l~~~~~  160 (205)
T 3grz_A          149 LNEDGQVIFSGI  160 (205)
T ss_dssp             EEEEEEEEEEEE
T ss_pred             cCCCCEEEEEec
Confidence            999999998654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.83  E-value=0.0054  Score=52.83  Aligned_cols=74  Identities=14%  Similarity=0.175  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHc--C-C-cee--eeCCChh----HHHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAA--G-A-EQA--VDYSSKD----IELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~--g-~-~~v--~~~~~~~----~~~~i~---  235 (364)
                      .++++||+||++++|.++++.+...|++|+.+.++.+. + .   +.+.  + . ...  .|..+.+    +.+.+.   
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999999887653 2 2   2222  2 1 112  2444432    222222   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|++|.+.|.
T Consensus        86 g~iD~lvnnAg~   97 (250)
T 3nyw_A           86 GAVDILVNAAAM   97 (250)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            569999999985

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.83  E-value=0.0089  Score=51.70  Aligned_cols=74  Identities=16%  Similarity=0.278  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H-HHHHc----CCce-e--eeCCChh-HH---HHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D-RVLAA----GAEQ-A--VDYSSKD-IE---LAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~-~~~~~----g~~~-v--~~~~~~~-~~---~~i~---g  236 (364)
                      .+++++|+||+|++|..+++.+...|++|+.+.++.+.  + ...++    +... .  .|..+.+ +.   +.+.   |
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46889999999999999999999999999998776542  2 22222    4321 2  2444432 22   2221   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus        83 ~iD~lv~~Ag~   93 (260)
T 1x1t_A           83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            59999999884

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.82  E-value=0.0044  Score=54.28  Aligned_cols=74  Identities=26%  Similarity=0.360  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCChh-HH---HHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSKD-IE---LAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~~-~~---~~i~---g~~D~v  241 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...+.+... .  .|..+.+ +.   +.+.   |++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46889999999999999999999999999999887654  3444444321 2  2444432 22   2221   459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        84 v~~Ag~   89 (281)
T 3m1a_A           84 VNNAGR   89 (281)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.82  E-value=0.0031  Score=55.66  Aligned_cols=74  Identities=9%  Similarity=0.173  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh-HHHHhc--CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-IELAIK--GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~~~~i~--g~~D~vid~~  245 (364)
                      .|++++|+||+|++|..+++.+...|++|+.+.++.+.  +...+++...   ..|..+.+ +...+.  +++|++|.+.
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nA   94 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNA   94 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence            57899999999999999999999999999999988764  3334444321   12333332 222222  4589999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        95 g~   96 (291)
T 3rd5_A           95 GI   96 (291)
T ss_dssp             CC
T ss_pred             cC
Confidence            84

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.82  E-value=0.0016  Score=55.53  Aligned_cols=94  Identities=12%  Similarity=0.177  Sum_probs=63.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCCch--
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGAPE--  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~~~--  249 (364)
                      ++|+|+||+|.+|..+++.+...| ++|+++.++++. ..+...++.. ..|..+. ++...+.+ +|++|.+.|...  
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~D~vv~~a~~~~~~  102 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQG-QDIVYANLTGEDLD  102 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTT-CSEEEEECCSTTHH
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcC-CCEEEEcCCCCchh
Confidence            579999999999999999999999 899999887654 2111112221 2244443 34445556 999999998752  


Q ss_pred             -hHHHHHhhccCC--CEEEEEccC
Q 017901          250 -TERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       250 -~~~~~~~~l~~~--G~~v~~g~~  270 (364)
                       ..+.+++.++..  +++|.++..
T Consensus       103 ~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A          103 IQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEEecc
Confidence             234455555443  689988754

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.81  E-value=0.0048  Score=53.37  Aligned_cols=74  Identities=19%  Similarity=0.311  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc---CCc-e--eeeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA---GAE-Q--AVDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~---g~~-~--v~~~~~~~-~---~~~i~---g~~  238 (364)
                      .++++||+||++++|.++++.+...|++|+.+.++++.  +...++   +.. .  ..|..+.+ .   .+.+.   |++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999887654  223333   222 1  22444432 2   22222   559


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        85 d~lv~nAg~   93 (257)
T 3imf_A           85 DILINNAAG   93 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.81  E-value=0.0048  Score=53.71  Aligned_cols=75  Identities=31%  Similarity=0.485  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH----HcCCce-e--eeCCChh-HH---HHhc---C
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL----AAGAEQ-A--VDYSSKD-IE---LAIK---G  236 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~----~~g~~~-v--~~~~~~~-~~---~~i~---g  236 (364)
                      -.+++++|+||+|++|..+++.+...|++|+++.++.+.  +...    +.+... .  .|..+.+ +.   +.+.   |
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999887553  2222    224332 1  2444432 22   2221   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus        99 ~iD~lvnnAg~  109 (267)
T 1vl8_A           99 KLDTVVNAAGI  109 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            59999999884

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.81  E-value=0.0076  Score=52.04  Aligned_cols=73  Identities=21%  Similarity=0.233  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee--eCCChh-HH---HHhc---CCccEEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV--DYSSKD-IE---LAIK---GKFDAVLD  243 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~--~~~~~~-~~---~~i~---g~~D~vid  243 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++++. +...+++. ..+  |..+.+ +.   +.+.   |++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46889999999999999999999999999999876554 33344432 332  444332 22   2221   45999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        84 ~Ag~   87 (256)
T 2d1y_A           84 NAAI   87 (256)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.79  E-value=0.0089  Score=49.52  Aligned_cols=100  Identities=13%  Similarity=-0.023  Sum_probs=67.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHH----HHcCCce--eeeCCChhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV----LAAGAEQ--AVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~----~~~g~~~--v~~~~~~~~~~~i~g~~D  239 (364)
                      ....++++++||-.| +| .|..+..+++.. ..+|+++..++.. +.+    ...+.+.  ++..+..+..... +++|
T Consensus        34 ~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D  110 (204)
T 3e05_A           34 SKLRLQDDLVMWDIG-AG-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPD  110 (204)
T ss_dssp             HHTTCCTTCEEEEET-CT-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCS
T ss_pred             HHcCCCCCCEEEEEC-CC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCC
Confidence            566788999999999 55 488999999885 3699999776653 333    3445432  2322221111111 3499


Q ss_pred             EEEECCCC---chhHHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGA---PETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+.....   ...+..+.+.|++||+++.....
T Consensus       111 ~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  144 (204)
T 3e05_A          111 RVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT  144 (204)
T ss_dssp             EEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred             EEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence            99987652   34778999999999999987643

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.79  E-value=0.0051  Score=53.07  Aligned_cols=72  Identities=13%  Similarity=0.057  Sum_probs=48.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHcCCce-eeeCCC-hhHHHHhc---CCccEEEECCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAAGAEQ-AVDYSS-KDIELAIK---GKFDAVLDTIG  246 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~g~~~-v~~~~~-~~~~~~i~---g~~D~vid~~g  246 (364)
                      ++++|+||+|++|..+++.+...|++|+++.++.+. +.   +.+.+.+. .++... ..+.+.+.   |++|++|++.|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            469999999999999999999999999999876543 22   23334332 222222 12333332   45999999987


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        82 ~   82 (254)
T 1zmt_A           82 F   82 (254)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.79  E-value=0.0065  Score=52.98  Aligned_cols=74  Identities=24%  Similarity=0.340  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCcee--eeCCChh-HH---HHhc---CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQA--VDYSSKD-IE---LAIK---GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~~v--~~~~~~~-~~---~~i~---g~~D~vi  242 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++++. + ...++.....  .|..+.+ +.   +.+.   |++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57899999999999999999999999999999887654 2 3334332222  2434432 22   2221   4599999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.78  E-value=0.0054  Score=54.27  Aligned_cols=74  Identities=22%  Similarity=0.315  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc---CCce--e--eeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA---GAEQ--A--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~---g~~~--v--~~~~~~~----~~~~i~---g~  237 (364)
                      .++++||+||+|++|..+++.+...|++|+.+.++.+.  +...++   +...  .  .|..+.+    +.+.+.   |+
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999887653  333333   3111  2  2444432    222221   55


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|++.|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.78  E-value=0.004  Score=54.20  Aligned_cols=74  Identities=16%  Similarity=0.339  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce---eeeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ---AVDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~  238 (364)
                      .++++||+||++++|.++++.+...|++|+.+.++.+.  +   .+.+.+...   ..|..+.+ .   .+.+.   |++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999887653  2   233334332   23444432 2   22221   569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        83 D~lVnnAG~   91 (264)
T 3tfo_A           83 DVLVNNAGV   91 (264)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.78  E-value=0.0062  Score=53.31  Aligned_cols=74  Identities=18%  Similarity=0.310  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCc-ee--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAE-QA--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .|+++||+||++++|..+++.+...|++|+.+.++++.  +   .+.+.+.. ..  .|..+.+ +   .+.+.   |++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999887653  2   23333432 12  2444432 2   22222   569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus       111 D~lvnnAg~  119 (276)
T 3r1i_A          111 DIAVCNAGI  119 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.76  E-value=0.0053  Score=54.02  Aligned_cols=74  Identities=23%  Similarity=0.386  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--------H----HHHHHcCCce-e--eeCCChh----HHHHh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--------I----DRVLAAGAEQ-A--VDYSSKD----IELAI  234 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--------~----~~~~~~g~~~-v--~~~~~~~----~~~~i  234 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.++.+        .    +.+.+.+... .  .|..+.+    +.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999987654        1    2234444432 1  2444432    22222


Q ss_pred             c---CCccEEEECCCC
Q 017901          235 K---GKFDAVLDTIGA  247 (364)
Q Consensus       235 ~---g~~D~vid~~g~  247 (364)
                      .   |++|++|.+.|.
T Consensus        88 ~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            2   569999999884

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.76  E-value=0.0062  Score=51.98  Aligned_cols=72  Identities=21%  Similarity=0.295  Sum_probs=50.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCChh---HHHHhc---CCccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSKD---IELAIK---GKFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~~---~~~~i~---g~~D~vid~~g~  247 (364)
                      +++++|+||+|++|..+++.+...|++|+++.++.+. ...++++.. ..|..+.+   +.+.+.   +++|++|++.|.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag~   80 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE-AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAV   80 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            5789999999999999999999999999999887654 333445321 12333322   222221   459999999884

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.76  E-value=0.0095  Score=51.71  Aligned_cols=70  Identities=19%  Similarity=0.242  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCChh-HH---HHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSKD-IE---LAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~~-~~---~~i~---g~~D~vid~~  245 (364)
                      .++++||+||+|++|..+++.+...|++|+++.++++.    ...+.. ..|..+.+ +.   +.+.   |++|++|.+.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A   82 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA   82 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            46889999999999999999999999999999876543    111111 23444332 22   2221   4599999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        83 g~   84 (264)
T 2dtx_A           83 GI   84 (264)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.76  E-value=0.0082  Score=51.21  Aligned_cols=73  Identities=32%  Similarity=0.382  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHc-CCce-eeeCCChh-HHHHhc--CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAA-GAEQ-AVDYSSKD-IELAIK--GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~-g~~~-v~~~~~~~-~~~~i~--g~~D~vid~~g  246 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++.+. + ...+. +... ..|..+.+ +.+.+.  +++|++|.+.|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            46899999999999999999999999999999887653 2 23333 2221 22434432 333332  45899999998

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.75  E-value=0.0057  Score=52.58  Aligned_cols=74  Identities=18%  Similarity=0.269  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce--e--eeCCChh-HHHHh-----cCCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ--A--VDYSSKD-IELAI-----KGKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~--v--~~~~~~~-~~~~i-----~g~~D~v  241 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++.+.  +...+++...  .  .|..+.+ +...+     .+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            46899999999999999999999999999999887653  3334444321  1  2444432 22221     1459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        90 i~~Ag~   95 (254)
T 2wsb_A           90 VNSAGI   95 (254)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999884

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.75  E-value=0.0049  Score=54.06  Aligned_cols=75  Identities=24%  Similarity=0.314  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~  237 (364)
                      ..++++||+||++++|.++++.+...|++|+.+.++.+.  +.   +++.+...   ..|..+.+ .   .+.+.   |+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999887653  22   23334332   12444432 2   22221   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       102 id~lv~nAg~  111 (279)
T 3sju_A          102 IGILVNSAGR  111 (279)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999885

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.74  E-value=0.0059  Score=52.93  Aligned_cols=74  Identities=16%  Similarity=0.373  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCce-e--eeCCChh-HHH---Hhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAEQ-A--VDYSSKD-IEL---AIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~~-v--~~~~~~~-~~~---~i~---g~  237 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...++    +... .  .|..+.+ +..   .+.   |+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46889999999999999999999999999999887653  222222    4321 2  2444432 222   221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        86 id~lv~~Ag~   95 (263)
T 3ai3_A           86 ADILVNNAGT   95 (263)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.73  E-value=0.0048  Score=53.53  Aligned_cols=75  Identities=28%  Similarity=0.391  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ---AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~---v~~~~~~~-~---~~~i~---g~  237 (364)
                      -.++++||+||+|++|..+++.+...|++|+.+.++.+.  +   .+.+.+...   ..|..+.+ +   .+.+.   |+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            357899999999999999999999999999999887653  2   223344332   22444432 2   22221   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999985

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.73  E-value=0.0031  Score=54.84  Aligned_cols=93  Identities=18%  Similarity=0.152  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCc-eeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      .++.+||..| +|. |..+..+++.. |.+|+++..++.. +.+++.+.. .++..+..++. ...+.+|+|+.... ..
T Consensus        84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~-~~  159 (269)
T 1p91_A           84 DKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP-FSDTSMDAIIRIYA-PC  159 (269)
T ss_dssp             TTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-BCTTCEEEEEEESC-CC
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-CCCCceeEEEEeCC-hh
Confidence            6788999999 676 99999999986 7899999777664 666665533 22222211111 00134999996544 44


Q ss_pred             hHHHHHhhccCCCEEEEEcc
Q 017901          250 TERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .+..+.+.|++||+++....
T Consensus       160 ~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          160 KAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             CHHHHHHHEEEEEEEEEEEE
T ss_pred             hHHHHHHhcCCCcEEEEEEc
Confidence            89999999999999988754

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.73  E-value=0.011  Score=47.60  Aligned_cols=101  Identities=16%  Similarity=0.147  Sum_probs=67.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHH----HHcCCc-ee-eeCCChhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV----LAAGAE-QA-VDYSSKDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~----~~~g~~-~v-~~~~~~~~~~~i~g~~D  239 (364)
                      ....+.++++||-.| +|. |..+..+++.. +.+|+++..++.. +.+    .+.+.. .+ +..+..+......+++|
T Consensus        19 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D   96 (178)
T 3hm2_A           19 SALAPKPHETLWDIG-GGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPD   96 (178)
T ss_dssp             HHHCCCTTEEEEEES-TTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCS
T ss_pred             HHhcccCCCeEEEeC-CCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCC
Confidence            455778999999999 554 99999999887 5689999776653 333    344554 22 22222122222213499


Q ss_pred             EEEECCCCc--hhHHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAP--ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~--~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+......  ..+..+.+.|++||+++.....
T Consensus        97 ~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  129 (178)
T 3hm2_A           97 VIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVT  129 (178)
T ss_dssp             EEEECC-TTCTTHHHHHHHTCCTTCEEEEEECS
T ss_pred             EEEECCcccHHHHHHHHHHhcCCCCEEEEEeec
Confidence            999765443  3789999999999999977643

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.72  E-value=0.0067  Score=53.03  Aligned_cols=74  Identities=19%  Similarity=0.321  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH---HHcCCce---eeeCCChhHH----HHhc--CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV---LAAGAEQ---AVDYSSKDIE----LAIK--GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~---~~~g~~~---v~~~~~~~~~----~~i~--g~~D~  240 (364)
                      .|+++||+||++++|.++++.+...|++|+++.+.+.. +.+   .+.+...   ..|..+.+..    +.+.  |++|+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~  109 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV  109 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence            57899999999999999999999999999999876543 222   2333321   2244443221    1121  55999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus       110 lv~nAg~  116 (273)
T 3uf0_A          110 LVNNAGI  116 (273)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999885

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.72  E-value=0.0067  Score=52.26  Aligned_cols=75  Identities=19%  Similarity=0.234  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCC--ce--eeeC--CCh-h---HHHHhc--
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGA--EQ--AVDY--SSK-D---IELAIK--  235 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~--~~--v~~~--~~~-~---~~~~i~--  235 (364)
                      -.|++++|+||++++|.++++.+...|++|+.+.++++.  +..   .+.+.  ..  ..|.  .+. +   +.+.+.  
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999887653  222   22221  11  2233  332 2   222222  


Q ss_pred             -CCccEEEECCCC
Q 017901          236 -GKFDAVLDTIGA  247 (364)
Q Consensus       236 -g~~D~vid~~g~  247 (364)
                       |++|++|++.|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence             569999999884

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.72  E-value=0.0062  Score=52.92  Aligned_cols=74  Identities=26%  Similarity=0.359  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHH---Hc--CCce-e--eeCCChh-HH---HHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVL---AA--GAEQ-A--VDYSSKD-IE---LAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~---~~--g~~~-v--~~~~~~~-~~---~~i~---g  236 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++++. + ...   +.  +... .  .|..+.+ +.   +.+.   |
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999887653 2 222   22  3321 2  2444432 22   2221   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|++.|.
T Consensus        92 ~id~lv~nAg~  102 (267)
T 1iy8_A           92 RIDGFFNNAGI  102 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            59999999883

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.72  E-value=0.0066  Score=52.61  Aligned_cols=74  Identities=20%  Similarity=0.263  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-e--eeeCCChh-HHHHhc------CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-Q--AVDYSSKD-IELAIK------GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~--v~~~~~~~-~~~~i~------g~~D~v  241 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...++... .  ..|..+.+ +...+.      |++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46889999999999999999999999999999887654  223333321 1  22444432 222222      459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        86 v~~Ag~   91 (260)
T 1nff_A           86 VNNAGI   91 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.71  E-value=0.0049  Score=52.97  Aligned_cols=70  Identities=26%  Similarity=0.431  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChh-H---HHHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD-I---ELAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~-~---~~~i~---g~~D~vid~~  245 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+. +.+.  +  ...|..+.+ +   .+.+.   |++|++|.+.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~A   89 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   89 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            46889999999999999999999999999999876543 2111  1  233444432 2   22221   4599999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        90 g~   91 (247)
T 1uzm_A           90 GL   91 (247)
T ss_dssp             SC
T ss_pred             CC
Confidence            85

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.71  E-value=0.0049  Score=54.14  Aligned_cols=74  Identities=24%  Similarity=0.331  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc---CCce-e--eeCCChhH----HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA---GAEQ-A--VDYSSKDI----ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~---g~~~-v--~~~~~~~~----~~~i~---g~~  238 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+.  +...++   +... .  .|..+.+.    .+.+.   |++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999887653  333333   3221 1  23333322    22221   559


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|++.|.
T Consensus        87 D~lvnnAg~   95 (280)
T 3tox_A           87 DTAFNNAGA   95 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.70  E-value=0.0024  Score=54.41  Aligned_cols=98  Identities=23%  Similarity=0.304  Sum_probs=66.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCcee--eeCCC-hhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQA--VDYSS-KDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~v--~~~~~-~~~~~~i~g~~D  239 (364)
                      +...+.++++||..| +| .|..+..+++..+.+|+++..++.. +.+    ...|...+  ...+. ..+..  .+++|
T Consensus        85 ~~l~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD  160 (235)
T 1jg1_A           85 EIANLKPGMNILEVG-TG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP--KAPYD  160 (235)
T ss_dssp             HHHTCCTTCCEEEEC-CT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG--GCCEE
T ss_pred             HhcCCCCCCEEEEEe-CC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC--CCCcc
Confidence            456788999999999 55 7999999999877889999766553 333    34554332  22211 11111  12389


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|+.+..-......+.+.|++||+++..-.
T Consensus       161 ~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          161 VIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             EEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             EEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            999887765466788999999999887644

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.70  E-value=0.0074  Score=53.04  Aligned_cols=74  Identities=23%  Similarity=0.293  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc---CCce-e--eeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA---GAEQ-A--VDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~---g~~~-v--~~~~~~~----~~~~i~---g~~  238 (364)
                      .++++||+||++++|.++++.+...|++|+.+.++.+.  +...++   +... .  .|..+.+    +.+.+.   |++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999887653  233333   3221 2  2444432    222221   569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus       107 D~lVnnAg~  115 (283)
T 3v8b_A          107 DIVVANAGI  115 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.70  E-value=0.0066  Score=52.12  Aligned_cols=74  Identities=22%  Similarity=0.380  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce-e--eeCCChh-HH---HHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ-A--VDYSSKD-IE---LAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~-v--~~~~~~~-~~---~~i~---g~~  238 (364)
                      .+++++|+||+|++|.++++.+...|++|+.+.++.+. + .   +.+.+... .  .|..+.+ +.   +.+.   |++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999887543 2 2   22334321 2  2444432 22   2221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|++.|.
T Consensus        86 d~lv~nAg~   94 (247)
T 2jah_A           86 DILVNNAGI   94 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.70  E-value=0.0031  Score=53.18  Aligned_cols=93  Identities=19%  Similarity=0.261  Sum_probs=61.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCCch---
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      .+|+|+||+|.+|..+++.+...|.+|+++.++... ..+ ..+... ..|..+. ++.+.+.+ +|+||.+.|...   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-~d~vi~~a~~~~~~~   82 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKG-ADAVISAFNPGWNNP   82 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTT-CSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcC-CCEEEEeCcCCCCCh
Confidence            579999999999999999999999999999987654 111 012211 1233333 34455556 999999998641   


Q ss_pred             --------hHHHHHhhccCC--CEEEEEccC
Q 017901          250 --------TERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       250 --------~~~~~~~~l~~~--G~~v~~g~~  270 (364)
                              .....++.++..  +++|.++..
T Consensus        83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             -CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence                    223445555543  488888754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.69  E-value=0.0034  Score=48.68  Aligned_cols=91  Identities=20%  Similarity=0.203  Sum_probs=57.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHH--hcCCccEEEECCCCc-h
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELA--IKGKFDAVLDTIGAP-E  249 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~--i~g~~D~vid~~g~~-~  249 (364)
                      +++++|.| .|.+|..+++.++..|.+|+++.++++. +.+.+.+...+. +..+.+....  +.+ +|+++.|++.+ .
T Consensus         6 ~~~v~I~G-~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~d~vi~~~~~~~~   83 (144)
T 2hmt_A            6 NKQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRN-FEYVIVAIGANIQ   83 (144)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGG-CSEEEECCCSCHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCC-CCEEEECCCCchH
Confidence            56799999 5999999999999999999988776554 434444543221 3333332222  234 99999999974 2


Q ss_pred             h---HHHHHhhccCCCEEEEEc
Q 017901          250 T---ERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       250 ~---~~~~~~~l~~~G~~v~~g  268 (364)
                      .   +....+.+.+. +++...
T Consensus        84 ~~~~~~~~~~~~~~~-~ii~~~  104 (144)
T 2hmt_A           84 ASTLTTLLLKELDIP-NIWVKA  104 (144)
T ss_dssp             HHHHHHHHHHHTTCS-EEEEEC
T ss_pred             HHHHHHHHHHHcCCC-eEEEEe
Confidence            2   12233344443 666554

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.68  E-value=0.0051  Score=52.97  Aligned_cols=101  Identities=21%  Similarity=0.226  Sum_probs=69.4

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HH----HHHcCCceeeeCCChhHHHHhc-CCc
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DR----VLAAGAEQAVDYSSKDIELAIK-GKF  238 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~----~~~~g~~~v~~~~~~~~~~~i~-g~~  238 (364)
                      .....+.++++||-.| +|. |..+..+++..  +.+|+++..+++. +.    +...|....++....++.+... +++
T Consensus        86 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~  163 (255)
T 3mb5_A           86 VAYAGISPGDFIVEAG-VGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENV  163 (255)
T ss_dssp             HHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSE
T ss_pred             HHhhCCCCCCEEEEec-CCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCc
Confidence            3567889999999999 554 88999999885  5699999776553 33    3344543212211122222222 349


Q ss_pred             cEEEECCCCc-hhHHHHHhhccCCCEEEEEcc
Q 017901          239 DAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       239 D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+|+.....+ ..+..+.+.|+++|+++....
T Consensus       164 D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  195 (255)
T 3mb5_A          164 DHVILDLPQPERVVEHAAKALKPGGFFVAYTP  195 (255)
T ss_dssp             EEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence            9999877765 378999999999999998764

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.68  E-value=0.0057  Score=55.47  Aligned_cols=89  Identities=19%  Similarity=0.207  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|+++.|.| .|.+|..+++.++.+|.+|++..+....+.+.+.|+..+     .++.+.+.. .|+|+-++.....   
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~-----~~l~ell~~-aDiV~l~~Plt~~t~~  231 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVA-----ESKDALFEQ-SDVLSVHLRLNDETRS  231 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEEC-----SSHHHHHHH-CSEEEECCCCSTTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEe-----CCHHHHHhh-CCEEEEeccCcHHHHH
Confidence            478999999 899999999999999999999977654455667776422     123333334 8999998874321   


Q ss_pred             --HHHHHhhccCCCEEEEEcc
Q 017901          251 --ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~  269 (364)
                        -...+..|++++.+|.++.
T Consensus       232 li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          232 IITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CBCHHHHTTSCTTCEEEECSC
T ss_pred             hhCHHHHhhCCCCcEEEECCC
Confidence              2367788999999999983

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.67  E-value=0.0069  Score=53.75  Aligned_cols=75  Identities=19%  Similarity=0.291  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~  237 (364)
                      -.|+++||+||+|++|..+++.+...|++|+.+.++.+.  +.   +.+.+...   ..|..+.+ +   .+.+.   |+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            367899999999999999999999999999999887653  22   23334332   23444432 2   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.66  E-value=0.006  Score=53.47  Aligned_cols=74  Identities=26%  Similarity=0.381  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCC---c-ee--eeCCChh-H---HHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGA---E-QA--VDYSSKD-I---ELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~---~-~v--~~~~~~~-~---~~~i~---  235 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.++++.  +   .+++.+.   . ..  .|..+.+ .   .+.+.   
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999887653  2   2333343   1 11  2444432 2   22221   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|++|.+.|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            569999999985

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.66  E-value=0.0078  Score=51.86  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-H---HHHhc--CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK--GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~--g~~D  239 (364)
                      .+++++|+||++++|.++++.+...|++|+.+.++.+.  +.   +.+.+...   ..|..+.+ +   .+.+.  |++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            57899999999999999999999999999999887653  22   33334321   22444432 1   22221  4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        86 ~lv~nAg~   93 (252)
T 3h7a_A           86 VTIFNVGA   93 (252)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.66  E-value=0.0062  Score=51.76  Aligned_cols=73  Identities=21%  Similarity=0.238  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH----HcCCce-e--eeCCChh-HHHHhc------CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL----AAGAEQ-A--VDYSSKD-IELAIK------GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~----~~g~~~-v--~~~~~~~-~~~~i~------g~~  238 (364)
                      +++++|+||+|++|...++.+...|++|+.+.++.+.  +...    ..+... .  .|..+.+ +.+.+.      |++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            6789999999999999999999999999999887653  2222    334332 2  2444432 222222      459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        82 d~li~~Ag~   90 (235)
T 3l77_A           82 DVVVANAGL   90 (235)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999885

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.66  E-value=0.0067  Score=52.62  Aligned_cols=74  Identities=20%  Similarity=0.287  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce--e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ--A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~--v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .|++++|+||++++|..+++.+...|++|+.+.++.+.  +.   +.+.+...  .  .|..+.+ .   .+.+.   |+
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999887653  22   23333111  2  2444432 2   22221   55


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|++.|.
T Consensus        89 id~lvnnAg~   98 (262)
T 3pk0_A           89 IDVVCANAGV   98 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.66  E-value=0.0065  Score=52.64  Aligned_cols=74  Identities=22%  Similarity=0.327  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcC--Cce-eeeCCChh-HHHHhc------CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAG--AEQ-AVDYSSKD-IELAIK------GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g--~~~-v~~~~~~~-~~~~i~------g~~D~v  241 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+. + ...++.  +.. ..|..+.+ +...+.      |++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999887654 2 233332  211 23444432 222221      459999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |.+.|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.66  E-value=0.0069  Score=52.99  Aligned_cols=74  Identities=22%  Similarity=0.289  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++++.  +.   +++.+... .  .|..+.+ +   .+.+.   |++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46889999999999999999999999999999887653  22   23334321 2  2444432 2   22221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.65  E-value=0.0041  Score=53.30  Aligned_cols=72  Identities=17%  Similarity=0.033  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-e--CCccH--HHHHHc-CCceeeeCCC-hhHHHHhc---CCccEEEEC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-C--GSKSI--DRVLAA-GAEQAVDYSS-KDIELAIK---GKFDAVLDT  244 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~--~~~~~--~~~~~~-g~~~v~~~~~-~~~~~~i~---g~~D~vid~  244 (364)
                      +++++|+||+|++|..+++.+...|++|+++ .  ++.+.  +...++ +.+ +.+... ..+.+.+.   |++|++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-ALAEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999998 5  76543  233444 322 333322 23444443   459999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        80 Ag~   82 (244)
T 1zmo_A           80 DYI   82 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            884

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.65  E-value=0.006  Score=50.99  Aligned_cols=99  Identities=17%  Similarity=0.224  Sum_probs=67.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HHH----HHcCCce--eeeCCChhHHHHhcCCc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DRV----LAAGAEQ--AVDYSSKDIELAIKGKF  238 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~~----~~~g~~~--v~~~~~~~~~~~i~g~~  238 (364)
                      ....+.++++||..| +| .|..+..+++..|  .+|+++..++.. +.+    ...+...  +...+....... .+++
T Consensus        71 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~f  147 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIG-TG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP-LAPY  147 (215)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG-GCCE
T ss_pred             HhhCCCCCCEEEEEC-CC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC-CCCe
Confidence            556788999999999 55 5999999999886  799999776653 333    3344432  222211110010 1349


Q ss_pred             cEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+|+.+..-......+.++|++||+++..-.
T Consensus       148 D~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          148 DRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             EEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             eEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            9999887765455788999999999987754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.65  E-value=0.006  Score=52.72  Aligned_cols=74  Identities=18%  Similarity=0.223  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .|++++|+||++++|..+++.+...|++|+.+.++.+. +    .+++.+... .  .|..+.+ .   .+.+.   |++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999998899999999887653 2    233444332 2  2334432 2   22221   569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        91 d~lv~nAg~   99 (256)
T 3gaf_A           91 TVLVNNAGG   99 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.65  E-value=0.0085  Score=50.80  Aligned_cols=73  Identities=16%  Similarity=0.246  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCcee--eeCCChh-HH---HHhc---CCccEEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA--VDYSSKD-IE---LAIK---GKFDAVLD  243 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v--~~~~~~~-~~---~~i~---g~~D~vid  243 (364)
                      +++++|+||+|.+|..+++.+...|++|+++.++.+.  +...+++....  .|..+.+ +.   +.+.   +++|++|.
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999999999999999999887653  23344432222  2333332 22   2221   45999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        85 ~Ag~   88 (234)
T 2ehd_A           85 NAGV   88 (234)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9884

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.64  E-value=0.0064  Score=53.22  Aligned_cols=74  Identities=19%  Similarity=0.378  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH----HcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL----AAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~----~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++.+.  +.+.    ..+... .  .|..+.+ .   .+.+.   |+
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999887653  2222    224321 2  2444432 2   22222   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       106 id~lv~nAg~  115 (277)
T 4fc7_A          106 IDILINCAAG  115 (277)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcC
Confidence            9999999983

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.64  E-value=0.0061  Score=53.24  Aligned_cols=74  Identities=20%  Similarity=0.264  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .|+++||+||++++|..+++.+...|++|+.+.++.+.  +   .+++.+... .  .|..+.+ +   .+.+.   |++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            57899999999999999999999999999999877653  2   233444432 1  2333332 2   22222   569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus       105 D~lv~nAg~  113 (271)
T 4ibo_A          105 DILVNNAGI  113 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.64  E-value=0.0079  Score=52.21  Aligned_cols=75  Identities=16%  Similarity=0.249  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      -.|+++||+|+++++|..+++.+...|++|+.+.++.+.  +   .+.+.+... .  .|..+.+ .   .+.+.   |+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            367899999999999999999999999999999887653  2   233344332 2  2444432 2   22221   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999999865

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.63  E-value=0.0076  Score=54.67  Aligned_cols=74  Identities=16%  Similarity=0.280  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH------------HHHHHcCCce---eeeCCChh----HHHHh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI------------DRVLAAGAEQ---AVDYSSKD----IELAI  234 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~------------~~~~~~g~~~---v~~~~~~~----~~~~i  234 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+.            +.+.+.|...   ..|..+.+    +.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999876541            2334445432   22444432    22222


Q ss_pred             c---CCccEEEECCCC
Q 017901          235 K---GKFDAVLDTIGA  247 (364)
Q Consensus       235 ~---g~~D~vid~~g~  247 (364)
                      .   |++|++|++.|.
T Consensus       124 ~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          124 IKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            2   559999999984

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.63  E-value=0.015  Score=51.15  Aligned_cols=74  Identities=19%  Similarity=0.252  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCc-eeeeCCCh-hHHHHhcCCccEEEEC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAE-QAVDYSSK-DIELAIKGKFDAVLDT  244 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~-~v~~~~~~-~~~~~i~g~~D~vid~  244 (364)
                      -.|++++|+|++|++|.+++..+...|++|+.+.++.++  +.+.++    ++. ...|..+. ++.+.+.. +|++|+|
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~DvlVn~  195 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG-AHFVFTA  195 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT-CSEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh-CCEEEEC
Confidence            367899999999999999999999999998888877543  223222    322 22354443 33444445 9999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      +|.
T Consensus       196 ag~  198 (287)
T 1lu9_A          196 GAI  198 (287)
T ss_dssp             CCT
T ss_pred             CCc
Confidence            974

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.62  E-value=0.0041  Score=53.62  Aligned_cols=90  Identities=14%  Similarity=0.087  Sum_probs=58.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhc---CCccEEEECCCCch--
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIK---GKFDAVLDTIGAPE--  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~---g~~D~vid~~g~~~--  249 (364)
                      ++++|+||+|++|..+++.+...|++|+++.++++...     .....|..+. ++...+.   +++|++|++.|...  
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~   76 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----ADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT   76 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----cccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCc
Confidence            47999999999999999999999999999988654310     0111121111 1222221   34799999998642  


Q ss_pred             ----------------hHHHHHhhccC--CCEEEEEccC
Q 017901          250 ----------------TERLGLNFLKR--GGHYMTLHGE  270 (364)
Q Consensus       250 ----------------~~~~~~~~l~~--~G~~v~~g~~  270 (364)
                                      ..+.+++.++.  .|++|.++..
T Consensus        77 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           77 KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence                            13445555543  3899999865

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.62  E-value=0.0064  Score=52.80  Aligned_cols=74  Identities=18%  Similarity=0.218  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHH-cCCc--ee--eeCCChh----HHHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLA-AGAE--QA--VDYSSKD----IELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~-~g~~--~v--~~~~~~~----~~~~i~---g  236 (364)
                      .++++||+||++++|.++++.+...|++|+.+.++.+.  +.   +.+ .+..  ..  .|..+.+    +.+.+.   |
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999887653  22   222 3322  12  2444432    222222   5


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|++.|.
T Consensus        87 ~id~lvnnAg~   97 (265)
T 3lf2_A           87 CASILVNNAGQ   97 (265)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.61  E-value=0.0055  Score=52.78  Aligned_cols=99  Identities=14%  Similarity=0.076  Sum_probs=68.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHHHH----c-CCce--eeeCCChhHHHHhc-C
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRVLA----A-GAEQ--AVDYSSKDIELAIK-G  236 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~~~----~-g~~~--v~~~~~~~~~~~i~-g  236 (364)
                      ....+.++++||-.| +| .|..+..+++..  +.+|+++..++.. +.+++    . |.+.  +...+-.+.  .+. +
T Consensus        90 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~  165 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAG-TG-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEA  165 (258)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTT
T ss_pred             HHcCCCCCCEEEEEC-CC-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCC
Confidence            556789999999999 56 499999999885  5699999776653 44333    2 5322  222221111  021 3


Q ss_pred             CccEEEECCCCc-hhHHHHHhhccCCCEEEEEccC
Q 017901          237 KFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|+|+...... ..+..+.+.|+++|+++.+...
T Consensus       166 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  200 (258)
T 2pwy_A          166 AYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPN  200 (258)
T ss_dssp             CEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred             CcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence            499999877665 5789999999999999988643

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.61  E-value=0.0075  Score=51.65  Aligned_cols=74  Identities=20%  Similarity=0.315  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce-e--eeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ-A--VDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~-v--~~~~~~~----~~~~i~---g~~  238 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.++.+. +    .+++.+... .  .|..+.+    +.+.+.   +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999999887653 2    233444432 2  2444332    222222   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.61  E-value=0.0079  Score=51.72  Aligned_cols=74  Identities=22%  Similarity=0.292  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~----~~~~i~---g~~  238 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.++++.  +.   +.+.+... .  .|..+.+    +.+.+.   |++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999887653  22   23334321 2  2334432    222222   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999985

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.60  E-value=0.0091  Score=52.24  Aligned_cols=74  Identities=26%  Similarity=0.349  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc---CCcee--eeCCChh-H---HHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA---GAEQA--VDYSSKD-I---ELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~---g~~~v--~~~~~~~-~---~~~i~---g~~D  239 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...++   +....  .|..+.+ +   .+.+.   |++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            46899999999999999999999999999999887653  223333   21111  2334332 2   22221   4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus       108 ~lvnnAg~  115 (276)
T 2b4q_A          108 ILVNNAGT  115 (276)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999983

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.60  E-value=0.0061  Score=53.17  Aligned_cols=74  Identities=18%  Similarity=0.260  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCc-e--eeeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAE-Q--AVDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~-~--v~~~~~~~-~---~~~i~---g~~  238 (364)
                      .++++||+||++++|..+++.+...|++|+.+.++++. +    .+.+.+.. .  ..|..+.+ +   .+.+.   |++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999887653 2    23333432 1  23444432 2   22221   569


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus       107 D~lvnnAg~  115 (270)
T 3ftp_A          107 NVLVNNAGI  115 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.58  E-value=0.0087  Score=51.84  Aligned_cols=74  Identities=23%  Similarity=0.389  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HH---HHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RV---LAAGAEQ-A--VDYSSKD-I---ELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~---~~~g~~~-v--~~~~~~~-~---~~~i~---g~~  238 (364)
                      .+++++|+||+|++|..+++.+...|++|+.+.++.+. + ..   .+.+... .  .|..+.+ +   .+.+.   |++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999887543 2 22   2234321 1  2444432 2   22221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        86 d~lv~nAg~   94 (262)
T 1zem_A           86 DFLFNNAGY   94 (262)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.57  E-value=0.0026  Score=54.81  Aligned_cols=93  Identities=20%  Similarity=0.310  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-h---HHHHhc---CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-D---IELAIK---GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~---~~~~i~---g~~D~vid~~g  246 (364)
                      -+++++|+||+|++|..+++.+...|++|+++.++.......    ...++..+. +   +.+.+.   |++|++|.+.|
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag   96 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH----SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG   96 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE----EEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc----ceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            368999999999999999999999999999998876542111    112223332 2   222222   45999999998


Q ss_pred             Cc-------hh-------------------HHHHHhhccCCCEEEEEccC
Q 017901          247 AP-------ET-------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       247 ~~-------~~-------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..       ..                   .+.+...++++|++|.++..
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (251)
T 3orf_A           97 GWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS  146 (251)
T ss_dssp             CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             cCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence            31       01                   24455667778999999864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.57  E-value=0.011  Score=51.51  Aligned_cols=74  Identities=23%  Similarity=0.369  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce---eeeCCChh-HHHHh---c----CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ---AVDYSSKD-IELAI---K----GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~---v~~~~~~~-~~~~i---~----g~  237 (364)
                      .+++++|+||+|++|.++++.+...|++|+++.++++. + .   +.+.+...   ..|..+.+ +...+   .    |+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999887653 2 2   23334331   22444432 22211   1    45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|++.|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999885

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.57  E-value=0.0063  Score=51.64  Aligned_cols=99  Identities=14%  Similarity=0.208  Sum_probs=66.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHH----HHcCCc---eeeeCCChhHHHHh--cC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV----LAAGAE---QAVDYSSKDIELAI--KG  236 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~----~~~g~~---~v~~~~~~~~~~~i--~g  236 (364)
                      ......++++||-.| +| .|..+..+++.. +.+|+++..++.. +.+    ...|..   .++..+..+.....  .+
T Consensus        48 ~~~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~  125 (233)
T 2gpy_A           48 HLLKMAAPARILEIG-TA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYP  125 (233)
T ss_dssp             HHHHHHCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSC
T ss_pred             HHHhccCCCEEEEec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCC
Confidence            344556889999999 55 789999999987 5799999776553 333    344542   22333323322333  23


Q ss_pred             CccEEEECCCC---chhHHHHHhhccCCCEEEEEc
Q 017901          237 KFDAVLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       237 ~~D~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      ++|+|+.....   ...+..+.+.|++||+++...
T Consensus       126 ~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          126 LFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             CEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            49999876553   246788999999999998763

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.56  E-value=0.0079  Score=53.69  Aligned_cols=98  Identities=15%  Similarity=0.124  Sum_probs=67.0

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH----cCCce---eeeCCChhHHHHhcCC
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA----AGAEQ---AVDYSSKDIELAIKGK  237 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~----~g~~~---v~~~~~~~~~~~i~g~  237 (364)
                      +.....+.++++||-.| +|. |..+..+++..|++|+++..++.. +.+++    .|...   ++..+-.++    .++
T Consensus        82 ~~~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~  155 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIG-CGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----AEP  155 (318)
T ss_dssp             HHTTSCCCTTCEEEEES-CTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----CCC
T ss_pred             HHHhcCCCCcCEEEEEc-ccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC----CCC
Confidence            34566788999999999 554 888999998889999999777654 44433    34321   222222222    134


Q ss_pred             ccEEEEC-----CCC---chhHHHHHhhccCCCEEEEEcc
Q 017901          238 FDAVLDT-----IGA---PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|+|+..     ++.   ...+..+.+.|+|||+++....
T Consensus       156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9999976     442   2367888999999999987654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.55  E-value=0.011  Score=51.07  Aligned_cols=74  Identities=24%  Similarity=0.378  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-HHHHhc-------CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-IELAIK-------GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~~~~i~-------g~  237 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++++.  +.   +.+.+...   ..|..+.+ +...+.       |+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999887653  22   22334321   12444432 222221       45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|++.|.
T Consensus        88 id~lv~~Ag~   97 (260)
T 2ae2_A           88 LNILVNNAGI   97 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.55  E-value=0.0046  Score=53.94  Aligned_cols=74  Identities=19%  Similarity=0.322  Sum_probs=50.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCChh-H---HHHhc---CCccEEE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKD-I---ELAIK---GKFDAVL  242 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~~-~---~~~i~---g~~D~vi  242 (364)
                      .-..|+++||+||++++|.++++.+...|++|+++.++++...  . .+. ...|..+.+ .   .+.+.   |++|++|
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   86 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV--N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV   86 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT--T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc--C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3457899999999999999999999999999999987665321  0 111 123444432 2   22221   5699999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus        87 ~nAg~   91 (269)
T 3vtz_A           87 NNAGI   91 (269)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99984

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.55  E-value=0.0044  Score=53.94  Aligned_cols=74  Identities=20%  Similarity=0.329  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HH-cCCce---eeeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LA-AGAEQ---AVDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~-~g~~~---v~~~~~~~----~~~~i~---g~  237 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+.  +..   .+ .+...   ..|..+.+    +.+.+.   |+
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999887653  222   22 34321   22443332    222222   55


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        99 id~lv~nAg~  108 (266)
T 4egf_A           99 LDVLVNNAGI  108 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CCEEEECCCc
Confidence            9999999884

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.55  E-value=0.011  Score=52.44  Aligned_cols=98  Identities=11%  Similarity=0.018  Sum_probs=68.1

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc---eeeeCCChhHHHHhcCC
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QAVDYSSKDIELAIKGK  237 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~---~v~~~~~~~~~~~i~g~  237 (364)
                      +.....++++++||-.| +| .|..+..+++..|++|+++..++.. +.    +...|..   .++..+-.++    .++
T Consensus        64 ~~~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~  137 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIG-CG-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DEP  137 (302)
T ss_dssp             HHHTTCCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CCC
T ss_pred             HHHHcCCCCcCEEEEee-cc-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CCC
Confidence            44567789999999999 55 4999999999989999999776653 33    3444543   1222222222    345


Q ss_pred             ccEEEECCC-----C----------chhHHHHHhhccCCCEEEEEcc
Q 017901          238 FDAVLDTIG-----A----------PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~vid~~g-----~----------~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|+|+....     .          ...+..+.+.|+|||+++....
T Consensus       138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            999987432     1          1367889999999999998764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.54  E-value=0.0076  Score=53.99  Aligned_cols=74  Identities=23%  Similarity=0.428  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCC--c-e--eeeCCChh-H---HHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGA--E-Q--AVDYSSKD-I---ELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~--~-~--v~~~~~~~-~---~~~i~---g  236 (364)
                      .++++||+||+|++|..+++.+...|++|+.+.++.+.  +   .+...+.  . .  ..|..+.+ +   .+.+.   |
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999887653  2   2233333  1 1  23444432 2   22221   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus        87 ~id~lv~nAg~   97 (319)
T 3ioy_A           87 PVSILCNNAGV   97 (319)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            59999999983

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.53  E-value=0.0072  Score=52.55  Aligned_cols=74  Identities=20%  Similarity=0.285  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-e----eeeCCChhHHHHh-c--CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-Q----AVDYSSKDIELAI-K--GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~----v~~~~~~~~~~~i-~--g~~D~  240 (364)
                      .|+++||+||++++|..+++.+...|++|+.+.++++.  +.   +.+.+.. .    ..|..+.+..+.+ .  |++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            57899999999999999999999999999999887653  22   2333211 1    1234443322222 2  55999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      ++.+.|.
T Consensus        89 lv~nAg~   95 (267)
T 3t4x_A           89 LINNLGI   95 (267)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.53  E-value=0.0065  Score=52.89  Aligned_cols=72  Identities=17%  Similarity=0.196  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc--e--eeeCCChh-HH---HHhc---CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE--Q--AVDYSSKD-IE---LAIK---GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~--~--v~~~~~~~-~~---~~i~---g~~D~vi  242 (364)
                      .++++||+||+|++|..+++.+...|++|+.+.++.+.  +.+....  .  ..|..+.+ +.   +.+.   |++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER--LKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH--HHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            46899999999999999999999999999999887553  1222211  1  22444432 22   2221   5599999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99984

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.53  E-value=0.0061  Score=52.03  Aligned_cols=99  Identities=17%  Similarity=0.170  Sum_probs=66.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HH----HHHcCCce---eeeCCChhHHHHh---
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DR----VLAAGAEQ---AVDYSSKDIELAI---  234 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~----~~~~g~~~---v~~~~~~~~~~~i---  234 (364)
                      ......++++||-.| +| .|..+..+++..  +.+|+++..++.. +.    +.+.|...   ++..+..+.....   
T Consensus        54 ~l~~~~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~  131 (239)
T 2hnk_A           54 ILTKISGAKRIIEIG-TF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDS  131 (239)
T ss_dssp             HHHHHHTCSEEEEEC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC
T ss_pred             HHHHhhCcCEEEEEe-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhh
Confidence            334556789999999 45 699999999987  5799999776653 33    34445532   2222222222222   


Q ss_pred             ------------c-CCccEEEECCCCc---hhHHHHHhhccCCCEEEEEc
Q 017901          235 ------------K-GKFDAVLDTIGAP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       235 ------------~-g~~D~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                                  . +++|+|+...+..   ..+..+.+.|++||.++...
T Consensus       132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          132 KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                        1 3499999876654   35688899999999998754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.52  E-value=0.011  Score=51.62  Aligned_cols=74  Identities=26%  Similarity=0.392  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--------H-H---HHHHcCCce---eeeCCChh----HHHHh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--------I-D---RVLAAGAEQ---AVDYSSKD----IELAI  234 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--------~-~---~~~~~g~~~---v~~~~~~~----~~~~i  234 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++.+        . +   .+...+...   ..|..+.+    +.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999987643        1 1   123334321   23444432    22222


Q ss_pred             c---CCccEEEECCCC
Q 017901          235 K---GKFDAVLDTIGA  247 (364)
Q Consensus       235 ~---g~~D~vid~~g~  247 (364)
                      .   |++|++|++.|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            2   569999999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.51  E-value=0.011  Score=51.85  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   43 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRC   43 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            57899999999999999999999999999999875

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.51  E-value=0.014  Score=50.31  Aligned_cols=94  Identities=19%  Similarity=0.218  Sum_probs=62.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCceeeeCCChhHHHHh-cCCccEEEECC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQAVDYSSKDIELAI-KGKFDAVLDTI  245 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~v~~~~~~~~~~~i-~g~~D~vid~~  245 (364)
                      ++++++||-.| +|. |..++.+++ .|++|+++..++.. +.+    ...+..  +.....++.+.+ .+++|+|+.+.
T Consensus       118 ~~~~~~VLDiG-cG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv~n~  192 (254)
T 2nxc_A          118 LRPGDKVLDLG-TGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPFGPFDLLVANL  192 (254)
T ss_dssp             CCTTCEEEEET-CTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGGCCEEEEEEEC
T ss_pred             cCCCCEEEEec-CCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcCCCCCEEEECC
Confidence            67899999999 554 888887776 57799999766553 333    334543  222122333323 24599999765


Q ss_pred             CCc---hhHHHHHhhccCCCEEEEEccC
Q 017901          246 GAP---ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       246 g~~---~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      -..   ..+..+.+.|++||+++..+..
T Consensus       193 ~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          193 YAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence            322   3567888999999999988754

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.51  E-value=0.0091  Score=56.42  Aligned_cols=91  Identities=19%  Similarity=0.134  Sum_probs=69.6

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHH-HHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID-RVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      .-.|.+|.|.| .|.+|..+++.++.+|++|++..++.... .+...|+. +.     ++.+.+.. .|+|+-+++....
T Consensus       274 ~L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~-~~-----~l~ell~~-aDiVi~~~~t~~l  345 (494)
T 3d64_A          274 MIAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYR-VV-----TMEYAADK-ADIFVTATGNYHV  345 (494)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCE-EC-----CHHHHTTT-CSEEEECSSSSCS
T ss_pred             ccCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCE-eC-----CHHHHHhc-CCEEEECCCcccc
Confidence            35789999999 89999999999999999999997766542 34445653 21     34445555 9999999876544


Q ss_pred             H-HHHHhhccCCCEEEEEccC
Q 017901          251 E-RLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 ~-~~~~~~l~~~G~~v~~g~~  270 (364)
                      + ...+..|+++..++.+|..
T Consensus       346 I~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          346 INHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             BCHHHHHHCCTTEEEEECSSS
T ss_pred             cCHHHHhhCCCCcEEEEcCCC
Confidence            4 4678999999999999854

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.50  E-value=0.016  Score=51.53  Aligned_cols=94  Identities=14%  Similarity=0.116  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCC---ccH--HHHHHc----CCc-eeeeCCC-hhHHHHhcCCccE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS---KSI--DRVLAA----GAE-QAVDYSS-KDIELAIKGKFDA  240 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~---~~~--~~~~~~----g~~-~v~~~~~-~~~~~~i~g~~D~  240 (364)
                      -.|++++|.| +|++|.+++..+...|+ +|+.+.|+   .++  +++.++    +.. .+++.++ .++.+.+.. +|+
T Consensus       152 l~gk~~lVlG-aGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~-aDi  229 (315)
T 3tnl_A          152 IIGKKMTICG-AGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE-SVI  229 (315)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT-CSE
T ss_pred             ccCCEEEEEC-CChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC-CCE
Confidence            3688999999 58999999999999999 78888887   332  223332    221 2445544 345555556 999


Q ss_pred             EEECCCCch--h---HHH-HHhhccCCCEEEEEc
Q 017901          241 VLDTIGAPE--T---ERL-GLNFLKRGGHYMTLH  268 (364)
Q Consensus       241 vid~~g~~~--~---~~~-~~~~l~~~G~~v~~g  268 (364)
                      ||+|++..-  .   ... ....++++..++.+-
T Consensus       230 IINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dlv  263 (315)
T 3tnl_A          230 FTNATGVGMKPFEGETLLPSADMLRPELIVSDVV  263 (315)
T ss_dssp             EEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESC
T ss_pred             EEECccCCCCCCCCCCCCCcHHHcCCCCEEEEec
Confidence            999987430  0   111 345577776666664

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.50  E-value=0.011  Score=51.07  Aligned_cols=73  Identities=29%  Similarity=0.395  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChh-HHHHhc------CCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKD-IELAIK------GKFD  239 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~-~~~~i~------g~~D  239 (364)
                      +++++|+||+|++|..+++.+...|++|+++.++++.  +.   +.+.+.. ..  .|..+.+ +.+.+.      |++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999999999999999999887653  22   2233432 12  2444432 222221      4599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus        82 ~lv~nAg~   89 (256)
T 1geg_A           82 VIVNNAGV   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.50  E-value=0.008  Score=56.54  Aligned_cols=91  Identities=14%  Similarity=0.078  Sum_probs=70.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      --.|.+|.|.| .|.+|..+++.++.+|++|++..++... ..+...|+. +     .++.+.+.. .|+|+-+.+....
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~-----~~l~ell~~-aDiVi~~~~t~~l  325 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-V-----VTLDEIVDK-GDFFITCTGNVDV  325 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-E-----CCHHHHTTT-CSEEEECCSSSSS
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-e-----cCHHHHHhc-CCEEEECCChhhh
Confidence            45789999999 8999999999999999999999877654 244555653 2     134445555 9999999876644


Q ss_pred             H-HHHHhhccCCCEEEEEccC
Q 017901          251 E-RLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 ~-~~~~~~l~~~G~~v~~g~~  270 (364)
                      + ...+..|++++.++.+|..
T Consensus       326 I~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          326 IKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             BCHHHHTTCCTTCEEEECSST
T ss_pred             cCHHHHhhcCCCcEEEEeCCC
Confidence            4 3677899999999999854

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.50  E-value=0.011  Score=52.43  Aligned_cols=35  Identities=17%  Similarity=0.187  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .|++++|+||++++|.++++.+...|++|+++.++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~   61 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVC   61 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            57899999999999999999999999999998765

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.49  E-value=0.0063  Score=52.00  Aligned_cols=94  Identities=27%  Similarity=0.297  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee--eeCCCh-hH---HHHhc-----CCccEE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA--VDYSSK-DI---ELAIK-----GKFDAV  241 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v--~~~~~~-~~---~~~i~-----g~~D~v  241 (364)
                      ..+++++|+||+|++|..+++.+...|++|+++.++++...    +....  .|..+. ++   .+.+.     |++|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            45789999999999999999999999999999988765311    11111  233332 12   22221     359999


Q ss_pred             EECCCCc-------hh-------------------HHHHHhhccCCCEEEEEccC
Q 017901          242 LDTIGAP-------ET-------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~-------~~-------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |.+.|..       ..                   .+.+.+.++++|++|.++..
T Consensus        81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~  135 (241)
T 1dhr_A           81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  135 (241)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCH
Confidence            9998831       00                   13444556667999998764

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.49  E-value=0.028  Score=50.77  Aligned_cols=136  Identities=14%  Similarity=0.168  Sum_probs=81.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-H-cCCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCch
Q 017901          176 QRLLVLGGGGAVGFAAVQFSV-A-SGCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPE  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~-~-~g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~  249 (364)
                      -+|.|.| .|.+|...++.++ . .+++++++++.. ++  ..+.++|...+++    ++.+.+. ..+|+|+.|++...
T Consensus         9 ~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~----~~~~~l~~~~~D~V~i~tp~~~   83 (346)
T 3cea_A            9 LRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT----NYKDMIDTENIDAIFIVAPTPF   83 (346)
T ss_dssp             EEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES----CHHHHHTTSCCSEEEECSCGGG
T ss_pred             ceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC----CHHHHhcCCCCCEEEEeCChHh
Confidence            4789999 7999998888876 4 467888875543 33  3456677654432    2344443 13999999999886


Q ss_pred             hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcc-ceeEEEEEeccCHHHHHHHHHHHHcC
Q 017901          250 TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY-GIDYSYIYMRADAEGLEEIRRLSETG  328 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g  328 (364)
                      ....+..+++.|- -|.+..+..          . ...   ....-......+ ++.+...+..+....+..+.+++.+|
T Consensus        84 h~~~~~~al~~G~-~v~~eKp~~----------~-~~~---~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g  148 (346)
T 3cea_A           84 HPEMTIYAMNAGL-NVFCEKPLG----------L-DFN---EVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNG  148 (346)
T ss_dssp             HHHHHHHHHHTTC-EEEECSCCC----------S-CHH---HHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCC-EEEEcCCCC----------C-CHH---HHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcC
Confidence            7788888888764 445554310          0 110   111111112233 55554333332344688889999988


Q ss_pred             Cce
Q 017901          329 KLK  331 (364)
Q Consensus       329 ~i~  331 (364)
                      .+-
T Consensus       149 ~iG  151 (346)
T 3cea_A          149 DIG  151 (346)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.49  E-value=0.0095  Score=49.12  Aligned_cols=94  Identities=18%  Similarity=0.250  Sum_probs=61.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCCch---
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      .+|+|+||+|.+|..+++.+...|.+|+++.++... ......+... ..|..+. ++.+.+.+ +|+||.+.|...   
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~vi~~a~~~~~~~   82 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAG-QDAVIVLLGTRNDLS   82 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTT-CSEEEECCCCTTCCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcC-CCEEEECccCCCCCC
Confidence            689999999999999999999999999999887653 1111112221 1233343 34455556 999999998542   


Q ss_pred             -------hHHHHHhhccC--CCEEEEEccC
Q 017901          250 -------TERLGLNFLKR--GGHYMTLHGE  270 (364)
Q Consensus       250 -------~~~~~~~~l~~--~G~~v~~g~~  270 (364)
                             .....++.++.  -++++.++..
T Consensus        83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           83 PTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             ccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence                   13344444443  3588888754

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.49  E-value=0.0047  Score=52.59  Aligned_cols=92  Identities=21%  Similarity=0.215  Sum_probs=60.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee--eeCCCh-hH---HHHhc-----CCccEEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA--VDYSSK-DI---ELAIK-----GKFDAVLD  243 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v--~~~~~~-~~---~~~i~-----g~~D~vid  243 (364)
                      +++++|+||+|++|..+++.+...|++|+++.++++...    +....  .|..+. ++   .+.+.     |++|++|.
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~   78 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   78 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            568999999999999999999999999999988765311    10111  122222 11   12221     35999999


Q ss_pred             CCCCc-------hh-------------------HHHHHhhccCCCEEEEEccC
Q 017901          244 TIGAP-------ET-------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       244 ~~g~~-------~~-------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.|..       ..                   .+.+.+.++++|++|.++..
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  131 (236)
T 1ooe_A           79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  131 (236)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECch
Confidence            99831       01                   24455566667899998764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.48  E-value=0.0084  Score=51.86  Aligned_cols=74  Identities=19%  Similarity=0.287  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH--HH---HHHcCCce-e--eeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI--DR---VLAAGAEQ-A--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~--~~---~~~~g~~~-v--~~~~~~~----~~~~i~---g~  237 (364)
                      .++++||+||+|++|.++++.+...|++|+.+ .++++.  +.   +.+.+... .  .|..+.+    +.+.+.   |+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987 565443  22   23334332 2  2444432    222221   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        83 id~lv~nAg~   92 (258)
T 3oid_A           83 LDVFVNNAAS   92 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999974

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.48  E-value=0.011  Score=51.63  Aligned_cols=35  Identities=20%  Similarity=0.185  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .|+++||+||++++|..+++.+...|++|+.+.++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   46 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC   46 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence            57899999999999999999999999999998765

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.47  E-value=0.012  Score=51.42  Aligned_cols=74  Identities=20%  Similarity=0.236  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh----HHHHhc--CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD----IELAIK--GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~----~~~~i~--g~~D  239 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++++.  +.   +.+.+... .  .|..+.+    +.+.+.  |++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            57899999999999999999999999999999876543  22   23334332 1  2333322    222221  5599


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      ++|.+.|.
T Consensus       112 ~lvnnAg~  119 (275)
T 4imr_A          112 ILVINASA  119 (275)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.47  E-value=0.009  Score=51.19  Aligned_cols=74  Identities=19%  Similarity=0.344  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH--H---HHHHcCCce-e--eeCCChh-HH---HHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI--D---RVLAAGAEQ-A--VDYSSKD-IE---LAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~--~---~~~~~g~~~-v--~~~~~~~-~~---~~i~---g~  237 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.+ +++.  +   .+++.+... .  .|..+.+ +.   +.+.   |+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999987 5432  2   223334331 2  2444432 22   2221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|++.|.
T Consensus        83 id~lv~nAg~   92 (246)
T 2uvd_A           83 VDILVNNAGV   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.46  E-value=0.0093  Score=51.53  Aligned_cols=74  Identities=16%  Similarity=0.232  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-HH---HHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-IE---LAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~~---~~i~---g~~  238 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +.   +.+.+...   ..|..+.+ +.   +.+.   |++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999887643  22   23334321   12333332 22   2221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|++.|.
T Consensus        93 D~lv~~Ag~  101 (260)
T 2zat_A           93 DILVSNAAV  101 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.46  E-value=0.0084  Score=49.30  Aligned_cols=99  Identities=13%  Similarity=0.125  Sum_probs=65.5

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HH----HHHcCC-c--eeeeCCChhHHHHhcCCc
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DR----VLAAGA-E--QAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~----~~~~g~-~--~v~~~~~~~~~~~i~g~~  238 (364)
                      ...++++++||-.| +|. |..+..+++..+  .+|+++..++.. +.    +...|. .  .++..+-.++.....+++
T Consensus        17 ~~~~~~~~~vLDlG-cG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f   94 (197)
T 3eey_A           17 KMFVKEGDTVVDAT-CGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPV   94 (197)
T ss_dssp             HHHCCTTCEEEESC-CTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCE
T ss_pred             HhcCCCCCEEEEcC-CCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCc
Confidence            34678899999998 454 888889998864  599999776653 33    344444 1  233333223322222459


Q ss_pred             cEEEECCCC---------------chhHHHHHhhccCCCEEEEEcc
Q 017901          239 DAVLDTIGA---------------PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       239 D~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+|+...+-               ...+..+.+.|+++|+++....
T Consensus        95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            999866532               1368899999999999988754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.46  E-value=0.0084  Score=53.84  Aligned_cols=73  Identities=19%  Similarity=0.316  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-----cH-H----HHHHcCCce-e--eeCCCh-hHHHHhc-----
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-----SI-D----RVLAAGAEQ-A--VDYSSK-DIELAIK-----  235 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-----~~-~----~~~~~g~~~-v--~~~~~~-~~~~~i~-----  235 (364)
                      +++++|+||+|++|..+++.+...|++|+++.++-     +. +    .+.+.+... .  .|..+. ++...+.     
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999987641     11 1    223334321 2  244443 2222222     


Q ss_pred             -CCccEEEECCCC
Q 017901          236 -GKFDAVLDTIGA  247 (364)
Q Consensus       236 -g~~D~vid~~g~  247 (364)
                       |++|++|++.|.
T Consensus        85 ~g~iD~lVnnAG~   97 (324)
T 3u9l_A           85 DGRIDVLIHNAGH   97 (324)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             559999999983

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.46  E-value=0.012  Score=51.33  Aligned_cols=74  Identities=20%  Similarity=0.263  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce-e--eeCCChh-HH---HHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ-A--VDYSSKD-IE---LAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~-v--~~~~~~~-~~---~~i~---g~~  238 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+. + .   +.+.+... +  .|..+.+ +.   +.+.   |++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            56899999999999999999999999999999887653 2 2   23334321 2  2434332 22   2221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus       110 D~li~~Ag~  118 (272)
T 1yb1_A          110 SILVNNAGV  118 (272)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEECCCc
Confidence            999999984

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.46  E-value=0.011  Score=51.60  Aligned_cols=74  Identities=18%  Similarity=0.328  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-----HHHHHcCCce-ee--eCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-----DRVLAAGAEQ-AV--DYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-----~~~~~~g~~~-v~--~~~~~~-~---~~~i~---g~  237 (364)
                      .|++++|+||++++|..+++.+...|++|+.+.++.. .     +.+.+.+... ++  |..+.+ .   .+.+.   ++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999988433 2     2234444332 22  333332 2   22221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999885

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.45  E-value=0.0073  Score=52.77  Aligned_cols=74  Identities=18%  Similarity=0.313  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc---C---Cc-e--eeeCCChh-HHHHhc------
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA---G---AE-Q--AVDYSSKD-IELAIK------  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~---g---~~-~--v~~~~~~~-~~~~i~------  235 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...++   .   .. .  ..|..+.+ +...+.      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999887653  223333   2   11 1  13444432 222221      


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|++|++.|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            459999999884

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.44  E-value=0.0094  Score=51.45  Aligned_cols=73  Identities=21%  Similarity=0.306  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce---eeeCCChh-HH---HHhc--CCccEEEEC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ---AVDYSSKD-IE---LAIK--GKFDAVLDT  244 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~---v~~~~~~~-~~---~~i~--g~~D~vid~  244 (364)
                      .++++||+||++++|.++++.+...|++|+.+.+..+ +...+++...   ..|..+.+ ..   +.+.  |++|++|++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n   86 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE-DVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC   86 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH-HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH-HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence            4678999999999999999999899999999987443 3344445332   22444432 21   1111  459999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        87 Ag~   89 (257)
T 3tl3_A           87 AGT   89 (257)
T ss_dssp             GGG
T ss_pred             CCC
Confidence            984

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.44  E-value=0.011  Score=50.98  Aligned_cols=73  Identities=18%  Similarity=0.298  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH----HHHHH---cCCce-e--eeCCChh-HH---HHhc---CC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----DRVLA---AGAEQ-A--VDYSSKD-IE---LAIK---GK  237 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~~~---~g~~~-v--~~~~~~~-~~---~~i~---g~  237 (364)
                      +++++|+||+|++|..+++.+...|++|+++.++.+.    +...+   .+... .  .|..+.+ +.   +.+.   |+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999998889999999876543    12222   23321 1  2444432 22   2221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|++.|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.44  E-value=0.013  Score=50.36  Aligned_cols=73  Identities=16%  Similarity=0.197  Sum_probs=51.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee-eeCC--ChhHHHHhcCCccEEEECCCC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA-VDYS--SKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v-~~~~--~~~~~~~i~g~~D~vid~~g~  247 (364)
                      .-.+++++|+||+|++|..+++.+...|++|+++.++++  .+.+++...+ .|..  -..+.+.+.+ +|++|.+.|.
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~-iD~lv~~Ag~   91 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE--LLKRSGHRYVVCDLRKDLDLLFEKVKE-VDILVLNAGG   91 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH--HHHHTCSEEEECCTTTCHHHHHHHSCC-CSEEEECCCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH--HHHhhCCeEEEeeHHHHHHHHHHHhcC-CCEEEECCCC
Confidence            346789999999999999999999999999999988763  2334442222 2321  1123333334 9999999984

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.43  E-value=0.011  Score=52.21  Aligned_cols=74  Identities=16%  Similarity=0.319  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCce-e--eeCCChh-HH---HHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAEQ-A--VDYSSKD-IE---LAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~~-v--~~~~~~~-~~---~~i~---g~  237 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...++    +... +  .|..+.+ +.   +.+.   |+
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            46889999999999999999999999999999887653  222222    4321 2  2434332 22   2221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       105 id~li~~Ag~  114 (302)
T 1w6u_A          105 PNIVINNAAG  114 (302)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999983

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.43  E-value=0.011  Score=49.17  Aligned_cols=98  Identities=19%  Similarity=0.212  Sum_probs=66.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCce--eeeCCChhHHHHhcCCccE
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQ--AVDYSSKDIELAIKGKFDA  240 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~--v~~~~~~~~~~~i~g~~D~  240 (364)
                      ....++++++||-.| +| .|..+..+++. +.+|+++..++.. +.    +...+...  ++..+..+.... .+++|+
T Consensus        71 ~~l~~~~~~~vLdiG-~G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~  146 (210)
T 3lbf_A           71 ELLELTPQSRVLEIG-TG-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA-RAPFDA  146 (210)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEE
T ss_pred             HhcCCCCCCEEEEEc-CC-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-CCCccE
Confidence            556788999999999 55 58888888888 8899999777653 33    34445432  222222111111 134999


Q ss_pred             EEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          241 VLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+....-......+.+.|++||+++..-.
T Consensus       147 i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          147 IIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             EEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             EEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence            99976655455678999999999987643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.42  E-value=0.014  Score=51.03  Aligned_cols=74  Identities=22%  Similarity=0.357  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCc-ee--eeCCChh-HHH---Hhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAE-QA--VDYSSKD-IEL---AIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~-~v--~~~~~~~-~~~---~i~---g~~  238 (364)
                      .+++++|+||+|.+|..++..+...|++|+++.++... +    .+.+.+.. ..  .|..+.+ +.+   .+.   |++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999988889999999876542 2    22333432 12  2433332 222   221   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus       113 d~li~~Ag~  121 (279)
T 3ctm_A          113 DVFVANAGV  121 (279)
T ss_dssp             SEEEECGGG
T ss_pred             CEEEECCcc
Confidence            999999873

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.42  E-value=0.0085  Score=52.46  Aligned_cols=74  Identities=19%  Similarity=0.349  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH---HcCC---c-ee--eeCCChh-H---HHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AAGA---E-QA--VDYSSKD-I---ELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~---~~g~---~-~v--~~~~~~~-~---~~~i~---  235 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...   +.+.   . ..  .|..+.+ +   .+.+.   
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            46889999999999999999999999999999887653  2222   2232   1 12  2444432 2   22221   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|++|++.|.
T Consensus        85 g~iD~lv~nAg~   96 (280)
T 1xkq_A           85 GKIDVLVNNAGA   96 (280)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            459999999884

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.41  E-value=0.014  Score=49.97  Aligned_cols=74  Identities=22%  Similarity=0.411  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc--eee--eC--CCh-h---HHHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE--QAV--DY--SSK-D---IELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~--~v~--~~--~~~-~---~~~~i~---  235 (364)
                      .|++++|+||+|++|..+++.+...|++|+.+.++++.     +.+.+.+..  .++  +.  .+. +   +.+.+.   
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999887653     223344421  122  22  222 2   222222   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|++|.+.|.
T Consensus        93 g~id~lv~nAg~  104 (247)
T 3i1j_A           93 GRLDGLLHNASI  104 (247)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            459999999884

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.40  E-value=0.0084  Score=51.53  Aligned_cols=72  Identities=19%  Similarity=0.231  Sum_probs=49.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-e--eeeCCChh-HHHHhc------CCccEEEE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-Q--AVDYSSKD-IELAIK------GKFDAVLD  243 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~--v~~~~~~~-~~~~i~------g~~D~vid  243 (364)
                      ++++|+||+|++|..+++.+...|++|+.+.++.+.  +...+++.. .  ..|..+.+ +...+.      |++|++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            368999999999999999999999999999887653  333444432 1  23444432 222222      45999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        81 nAg~   84 (248)
T 3asu_A           81 NAGL   84 (248)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9884

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.39  E-value=0.014  Score=50.35  Aligned_cols=74  Identities=19%  Similarity=0.410  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCc-ee--eeCCChh-HHHHhc------CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~-~v--~~~~~~~-~~~~i~------g~~  238 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++.+.  +   .+++.+.. ..  .|..+.+ +...+.      +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999887543  2   22333432 12  2434332 222221      459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        92 d~vi~~Ag~  100 (260)
T 3awd_A           92 DILVACAGI  100 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.39  E-value=0.012  Score=51.38  Aligned_cols=74  Identities=20%  Similarity=0.212  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH--HHHHHc----CCce-e--eeCCCh----h-HHH---Hhc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI--DRVLAA----GAEQ-A--VDYSSK----D-IEL---AIK  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~--~~~~~~----g~~~-v--~~~~~~----~-~~~---~i~  235 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.+ +++.  +...++    +... .  .|..+.    + +..   .+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988 5543  222222    4321 1  233333    2 222   221


Q ss_pred             ---CCccEEEECCCC
Q 017901          236 ---GKFDAVLDTIGA  247 (364)
Q Consensus       236 ---g~~D~vid~~g~  247 (364)
                         |++|++|.+.|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence               459999999883

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.38  E-value=0.0084  Score=51.37  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce--eeeCCChhHHHHhc---CCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ--AVDYSSKDIELAIK---GKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~--v~~~~~~~~~~~i~---g~~D~vid~~g~  247 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+. +.+.++.-..  ..|..+.+..+.+.   +++|++|++.|.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~   84 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF   84 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence            47899999999999999999999999999999887543 2222332111  23444433222221   459999999884

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.38  E-value=0.015  Score=52.08  Aligned_cols=89  Identities=10%  Similarity=0.008  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      .|.++.|.| .|.+|...++.++.+|.+|++..+ +.+...+.+.|+.. .    .++.+.+.. .|+|+.++....   
T Consensus       145 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~----~~l~ell~~-aDvVil~~p~~~~t~  217 (320)
T 1gdh_A          145 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATF-H----DSLDSLLSV-SQFFSLNAPSTPETR  217 (320)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEE-C----SSHHHHHHH-CSEEEECCCCCTTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEE-c----CCHHHHHhh-CCEEEEeccCchHHH
Confidence            578999999 899999999999999999999987 66555556677642 1    123333334 899999988542   


Q ss_pred             -hH-HHHHhhccCCCEEEEEcc
Q 017901          250 -TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~  269 (364)
                       .+ ...+..+++++.+|.++.
T Consensus       218 ~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          218 YFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhcCHHHHhhCCCCcEEEECCC
Confidence             12 346788999999998874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.38  E-value=0.0093  Score=53.44  Aligned_cols=75  Identities=27%  Similarity=0.379  Sum_probs=50.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC----------ccH-----HHHHHcCCcee---eeCCChh-H---
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS----------KSI-----DRVLAAGAEQA---VDYSSKD-I---  230 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~----------~~~-----~~~~~~g~~~v---~~~~~~~-~---  230 (364)
                      -.|+++||+||++++|.++++.+...|++|+.+.++          .+.     +.+.+.+....   .|..+.+ +   
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            357899999999999999999999999999998765          221     22344443322   2333332 2   


Q ss_pred             HHHhc---CCccEEEECCCC
Q 017901          231 ELAIK---GKFDAVLDTIGA  247 (364)
Q Consensus       231 ~~~i~---g~~D~vid~~g~  247 (364)
                      .+.+.   |++|++|.+.|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            22221   569999999984

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.38  E-value=0.0094  Score=52.16  Aligned_cols=72  Identities=24%  Similarity=0.225  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCChh----HHHHhc--CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSKD----IELAIK--GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~~----~~~~i~--g~~D~vi  242 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+.  +...+++... +  .|..+.+    +.+.+.  +++|++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            57899999999999999999999999999999887654  4445555432 2  2333332    222222  4589999


Q ss_pred             ECC
Q 017901          243 DTI  245 (364)
Q Consensus       243 d~~  245 (364)
                      .+.
T Consensus       109 ~~a  111 (281)
T 3ppi_A          109 VAH  111 (281)
T ss_dssp             ECC
T ss_pred             Ecc
Confidence            983

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.37  E-value=0.014  Score=51.25  Aligned_cols=73  Identities=22%  Similarity=0.301  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce--e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ--A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~--v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++++. +    .+.+.+...  +  .|..+.+ +   .+.+.   |+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999887653 2    223334322  2  2434332 2   22221   45


Q ss_pred             ccEEEEC-CC
Q 017901          238 FDAVLDT-IG  246 (364)
Q Consensus       238 ~D~vid~-~g  246 (364)
                      +|++|.+ .|
T Consensus       107 iD~li~naag  116 (286)
T 1xu9_A          107 LDMLILNHIT  116 (286)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998 45

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.37  E-value=0.013  Score=50.92  Aligned_cols=74  Identities=27%  Similarity=0.381  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-ccH-----HHHHHcCCce-e--eeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSI-----DRVLAAGAEQ-A--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~~-----~~~~~~g~~~-v--~~~~~~~----~~~~i~---g~  237 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.+. .+.     +.+.+.+... .  .|..+.+    +.+.+.   |+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999988763 322     2233444332 2  2444432    222222   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       107 id~lv~nAg~  116 (269)
T 4dmm_A          107 LDVLVNNAGI  116 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.36  E-value=0.0094  Score=52.76  Aligned_cols=74  Identities=23%  Similarity=0.403  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCC---c-ee--eeCCChh-H---HHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGA---E-QA--VDYSSKD-I---ELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~---~-~v--~~~~~~~-~---~~~i~---  235 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +.   +.+.+.   . .+  .|..+.+ +   .+.+.   
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999999887653  22   223332   1 12  2444432 2   22221   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|++|++.|.
T Consensus       105 g~iD~lvnnAG~  116 (297)
T 1xhl_A          105 GKIDILVNNAGA  116 (297)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            459999999884

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.36  E-value=0.013  Score=51.41  Aligned_cols=35  Identities=20%  Similarity=0.182  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .|++++|+||++++|.++++.+...|++|+++.++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence            57899999999999999999999999999998665

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.36  E-value=0.03  Score=50.49  Aligned_cols=73  Identities=18%  Similarity=0.076  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHc-------CCce-eeeCCCh-hHHHHhcCCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAA-------GAEQ-AVDYSSK-DIELAIKGKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~-------g~~~-v~~~~~~-~~~~~i~g~~D  239 (364)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.+....  .   .+...       +... ..|..+. ++...+.+ +|
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d  102 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG-VD  102 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT-CS
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC-CC
Confidence            36799999999999999999999999999999875431  2   22221       2221 2234443 34444446 99


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      +||.+.+.
T Consensus       103 ~Vih~A~~  110 (351)
T 3ruf_A          103 HVLHQAAL  110 (351)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999985

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.34  E-value=0.014  Score=51.07  Aligned_cols=35  Identities=17%  Similarity=0.160  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~  207 (364)
                      -.|++++|+||++++|..+++.+...|++|+++.+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r   47 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI   47 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence            46789999999999999999999999999999876

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.34  E-value=0.011  Score=51.76  Aligned_cols=93  Identities=16%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCCc---
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGAP---  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~~---  248 (364)
                      +|+|+||+|.+|..+++.+...  |.+|+++.++... ..+...+...+ .|..+. ++.+.+.+ +|+||.+.+..   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~-~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAG-VSKLLFISGPHYDN   80 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTT-CSEEEECCCCCSCH
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhc-CCEEEEcCCCCcCc
Confidence            6899999999999999988887  8999999886554 43444454322 344443 34455556 99999998852   


Q ss_pred             ----hhHHHHHhhccCC--CEEEEEccC
Q 017901          249 ----ETERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       249 ----~~~~~~~~~l~~~--G~~v~~g~~  270 (364)
                          ......++.++..  +++|.++..
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence                1223444444433  488888754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.33  E-value=0.016  Score=50.63  Aligned_cols=34  Identities=24%  Similarity=0.228  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~  207 (364)
                      .|++++|+||++++|.++++.+...|++|+++.+
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r   43 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI   43 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence            5789999999999999999999999999999876

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.32  E-value=0.019  Score=52.24  Aligned_cols=87  Identities=14%  Similarity=0.164  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|+++.|.| .|.+|..+++.++.+|.+|++..+....+.+.+.|+..      .++.+.+.. .|+|+-++.....   
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~------~~l~ell~~-aDvV~l~~Plt~~T~~  246 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEP------ASLEDVLTK-SDFIFVVAAVTSENKR  246 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEE------CCHHHHHHS-CSEEEECSCSSCC---
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeee------CCHHHHHhc-CCEEEEcCcCCHHHHh
Confidence            378999999 99999999999999999999987765555566777642      134444445 9999998775321   


Q ss_pred             -H-HHHHhhccCCCEEEEEc
Q 017901          251 -E-RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g  268 (364)
                       + ...+..|++++.+|.++
T Consensus       247 li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          247 FLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             CCCHHHHHTSCTTCEEEECS
T ss_pred             hcCHHHHhcCCCCcEEEECc
Confidence             1 46778899999999988

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.32  E-value=0.015  Score=51.98  Aligned_cols=74  Identities=24%  Similarity=0.398  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC---------CccH-----HHHHHcCCceeeeCCChh----HHHHhc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG---------SKSI-----DRVLAAGAEQAVDYSSKD----IELAIK  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~---------~~~~-----~~~~~~g~~~v~~~~~~~----~~~~i~  235 (364)
                      .|++++|+||+|++|..+++.+...|++|++..+         +.+.     +.+++.+...+.|..+.+    +.+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999998633         3322     223344544455655432    222222


Q ss_pred             ---CCccEEEECCCC
Q 017901          236 ---GKFDAVLDTIGA  247 (364)
Q Consensus       236 ---g~~D~vid~~g~  247 (364)
                         |++|++|++.|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence               559999999883

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.31  E-value=0.019  Score=49.54  Aligned_cols=38  Identities=24%  Similarity=0.256  Sum_probs=33.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~   43 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAA   43 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHH
Confidence            46789999999999999999999999999999887653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.30  E-value=0.016  Score=50.71  Aligned_cols=74  Identities=12%  Similarity=0.191  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH--HHH---HHc-CCce-e--eeCCChh-H---HHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI--DRV---LAA-GAEQ-A--VDYSSKD-I---ELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~--~~~---~~~-g~~~-v--~~~~~~~-~---~~~i~---g  236 (364)
                      .++++||+||++++|..+++.+...|++|+.+.++. +.  ...   .+. +... .  .|..+.+ +   .+.+.   |
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            468999999999999999999999999999987743 22  222   222 2221 1  2333332 2   22221   5


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            59999999885

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.30  E-value=0.021  Score=49.98  Aligned_cols=98  Identities=15%  Similarity=0.117  Sum_probs=65.5

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH----cCCc---eeeeCCChhHHHHhcCC
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA----AGAE---QAVDYSSKDIELAIKGK  237 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~----~g~~---~v~~~~~~~~~~~i~g~  237 (364)
                      +.....+.++.+||-.| +| .|..+..+++..|++|+++..++.. +.+++    .|..   .+...+-.++.    ++
T Consensus        56 ~~~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~  129 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVG-CG-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----EP  129 (287)
T ss_dssp             HHTTTTCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----CC
T ss_pred             HHHHcCCCCcCEEEEEC-Cc-ccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC----CC
Confidence            33556788999999998 44 4888889997789999999776654 44333    3322   12222222221    34


Q ss_pred             ccEEEEC-----CCC---chhHHHHHhhccCCCEEEEEcc
Q 017901          238 FDAVLDT-----IGA---PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|+|+..     ++.   ...+..+.+.|+|||+++....
T Consensus       130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            9999875     322   2367888999999999987653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.30  E-value=0.022  Score=49.87  Aligned_cols=75  Identities=20%  Similarity=0.271  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH-----HHHHHcCCce---eeeCCChh-H---HHHhc---C
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI-----DRVLAAGAEQ---AVDYSSKD-I---ELAIK---G  236 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-----~~~~~~g~~~---v~~~~~~~-~---~~~i~---g  236 (364)
                      -.+++++|+||++++|..+++.+...|++|+.+.+ +++.     +.+...+...   ..|..+.+ .   .+.+.   |
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999875 4332     2233444332   12444432 2   22222   5


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            59999999986

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.27  E-value=0.019  Score=51.99  Aligned_cols=89  Identities=19%  Similarity=0.224  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch-h-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE-T-  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~-~-  250 (364)
                      .|.++.|.| .|.+|..+++.++.+|.+|++..++.. .+.+.+.|+..+     .++.+.+.. .|+|+-++.... + 
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~-aDvV~l~~Plt~~t~  235 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----EDLNEMLPK-CDVIVINMPLTEKTR  235 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SCHHHHGGG-CSEEEECSCCCTTTT
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CCHHHHHhc-CCEEEECCCCCHHHH
Confidence            578999999 899999999999999999999877653 466677776432     234444444 899999988431 1 


Q ss_pred             ---HHHHHhhccCCCEEEEEcc
Q 017901          251 ---ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ---~~~~~~~l~~~G~~v~~g~  269 (364)
                         -...+..|+++..+|.++-
T Consensus       236 ~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          236 GMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSC
T ss_pred             HhhcHHHHhcCCCCCEEEECcC
Confidence               2567888999999998874

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.27  E-value=0.013  Score=50.11  Aligned_cols=73  Identities=22%  Similarity=0.295  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCc-ee--eeCCCh-hHHHHhc------CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAE-QA--VDYSSK-DIELAIK------GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~-~v--~~~~~~-~~~~~i~------g~~  238 (364)
                      +++++|+||+|.+|..+++.+...|++|+++.++.+.  +...++    +.. .+  .|..+. ++.+.+.      +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999887653  223332    221 11  233333 2222221      459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        82 d~li~~Ag~   90 (250)
T 2cfc_A           82 DVLVNNAGI   90 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.27  E-value=0.013  Score=51.07  Aligned_cols=93  Identities=15%  Similarity=0.203  Sum_probs=61.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCCc---
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGAP---  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~~---  248 (364)
                      +|+|+||+|.+|..+++.+...  |.+|+++.++... ..+...+...+ .|..+. ++.+.+.+ +|+||.+.+..   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi~~a~~~~~~   79 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQG-VEKLLLISSSEVGQ   79 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTT-CSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-CCEEEEeCCCCchH
Confidence            4899999999999999998887  8999999887654 43444454322 244443 34445556 99999998852   


Q ss_pred             --hhHHHHHhhccCC--CEEEEEccC
Q 017901          249 --ETERLGLNFLKRG--GHYMTLHGE  270 (364)
Q Consensus       249 --~~~~~~~~~l~~~--G~~v~~g~~  270 (364)
                        ......++.++..  +++|.++..
T Consensus        80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           80 RAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence              1334445554432  588887754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.27  E-value=0.014  Score=52.20  Aligned_cols=36  Identities=14%  Similarity=0.138  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      -.|+++||+||++++|..+++.+...|++|+++.++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~   79 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC   79 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence            357899999999999999999999999999998654

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.25  E-value=0.022  Score=47.98  Aligned_cols=96  Identities=17%  Similarity=0.253  Sum_probs=65.5

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcC------CeEEEeeCCccH-HHH----HHcC-----Cc--eeeeCCChhHH-
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG------CHVSATCGSKSI-DRV----LAAG-----AE--QAVDYSSKDIE-  231 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g------~~vi~~~~~~~~-~~~----~~~g-----~~--~v~~~~~~~~~-  231 (364)
                      .++++++||-.| +|. |..+..+++..+      .+|+++..++.. +.+    ...+     .+  .++..+..+.. 
T Consensus        77 ~~~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVG-SGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEES-CTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEEC-CCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            578999999999 554 899999999876      599999776653 333    3334     22  22222222211 


Q ss_pred             ---HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          232 ---LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       232 ---~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                         .. .+++|+|+........+..+.+.|++||+++..-.
T Consensus       155 ~~~~~-~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          155 EEKKE-LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHH-HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccCcc-CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence               11 13499999887766577899999999999987754

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.25  E-value=0.014  Score=49.82  Aligned_cols=72  Identities=19%  Similarity=0.204  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      .+.+|+|+||+|.+|..+++.+...  |.+|+++.++... ..+ ..+... ..|..+. ++.+.+.+ +|+||.+.|.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~-~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQG-IDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTT-CSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcC-CCEEEEeccc
Confidence            4678999999999999999999888  7899999887543 211 112221 2344443 34444556 9999999874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.25  E-value=0.015  Score=50.01  Aligned_cols=74  Identities=20%  Similarity=0.448  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-ccH-H-H---HHHcCCce-e--eeCCChh-HHHHhc------CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSI-D-R---VLAAGAEQ-A--VDYSSKD-IELAIK------GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~~-~-~---~~~~g~~~-v--~~~~~~~-~~~~i~------g~  237 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++ .+. + .   +...+... .  .|..+.+ +...+.      |+
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999876 432 2 2   22234321 2  2444332 222221      45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.25  E-value=0.017  Score=51.08  Aligned_cols=73  Identities=19%  Similarity=0.270  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHH--------cCCc-ee--eeCCChh-HH---HHhc-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLA--------AGAE-QA--VDYSSKD-IE---LAIK-  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~--------~g~~-~v--~~~~~~~-~~---~~i~-  235 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  ....+        .+.. ..  .|..+.+ +.   +.+. 
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999887543  22222        1222 11  2333332 22   2221 


Q ss_pred             --CCccEEEECCC
Q 017901          236 --GKFDAVLDTIG  246 (364)
Q Consensus       236 --g~~D~vid~~g  246 (364)
                        |++|++|.+.|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              45999999998

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.25  E-value=0.02  Score=51.99  Aligned_cols=95  Identities=18%  Similarity=0.161  Sum_probs=62.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHH---HHHHc-CCcee-ee-CCCh-hHHHHhcCCccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID---RVLAA-GAEQA-VD-YSSK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~---~~~~~-g~~~v-~~-~~~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      +.+|+|+||+|.+|..+++.+...|.+|+++.++....   .+.+. ++..+ .| .++. ++...+.+ +|+||.+.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~-~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEG-AHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTT-CSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhc-CCEEEEcCCC
Confidence            56799999999999999999888899999998876532   22222 33221 24 4343 34555557 9999987765


Q ss_pred             c-----hhHHHHHhhccC-C--CEEEEEccC
Q 017901          248 P-----ETERLGLNFLKR-G--GHYMTLHGE  270 (364)
Q Consensus       248 ~-----~~~~~~~~~l~~-~--G~~v~~g~~  270 (364)
                      .     .....+++.++. +  +++|.++..
T Consensus        84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            3     112344444443 2  589888754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.24  E-value=0.017  Score=49.40  Aligned_cols=74  Identities=18%  Similarity=0.324  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH-----HHHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-----DRVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~-----~~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+||+|++|..+++.+...|++|+.+.+.. +.     +.+.+.+... .  .|..+.+ .   .+.+.   |+
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999998886643 22     2234445432 2  2333332 2   22221   55


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        83 id~lv~nAg~   92 (246)
T 3osu_A           83 LDVLVNNAGI   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.23  E-value=0.0074  Score=51.89  Aligned_cols=71  Identities=18%  Similarity=0.338  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCChh-HHHHhc------CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSKD-IELAIK------GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~~-~~~~i~------g~~D~vid~~  245 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+..   +.+... ..|..+.+ +...+.      |++|++|++.
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~A   82 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE---QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA   82 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS---CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh---cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            468899999999999999999999999999998875531   123221 23444432 222221      4599999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        83 g~   84 (250)
T 2fwm_X           83 GI   84 (250)
T ss_dssp             CC
T ss_pred             Cc
Confidence            84

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.23  E-value=0.01  Score=52.11  Aligned_cols=74  Identities=15%  Similarity=0.138  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH--HHHH----HcCCce---eeeCCC----hh-H---HHHhc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI--DRVL----AAGAEQ---AVDYSS----KD-I---ELAIK  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~--~~~~----~~g~~~---v~~~~~----~~-~---~~~i~  235 (364)
                      .+++++|+||+|++|.++++.+...|++|+.+.++. +.  +...    +.+...   ..|..+    .+ +   .+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999998876 32  2222    233221   124444    22 2   22221


Q ss_pred             ---CCccEEEECCCC
Q 017901          236 ---GKFDAVLDTIGA  247 (364)
Q Consensus       236 ---g~~D~vid~~g~  247 (364)
                         |++|++|.+.|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence               459999999884

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.21  E-value=0.017  Score=50.01  Aligned_cols=74  Identities=19%  Similarity=0.322  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCc-hHHHHHHHHHHHcCCeEEEeeCCccH--HHHH---HcCCce--e--eeCCChh-H---HHHhc---C
Q 017901          174 EGQRLLVLGGGG-AVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AAGAEQ--A--VDYSSKD-I---ELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g-~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~---~~g~~~--v--~~~~~~~-~---~~~i~---g  236 (364)
                      .+++++|+||+| ++|..+++.+...|++|+.+.++.+.  +...   +.+...  +  .|..+.+ +   .+.+.   |
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            578999999876 89999999999999999999887653  2222   223221  2  2444432 2   22221   5


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus       101 ~id~li~~Ag~  111 (266)
T 3o38_A          101 RLDVLVNNAGL  111 (266)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            59999999984

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.21  E-value=0.019  Score=51.09  Aligned_cols=90  Identities=16%  Similarity=0.225  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc------cH-HH---HHHcCCcee-eeCCCh-hHHHHhcCCccEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK------SI-DR---VLAAGAEQA-VDYSSK-DIELAIKGKFDAVL  242 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~------~~-~~---~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vi  242 (364)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.      ++ ..   +...++..+ .|..+. ++...+.+ +|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~-~d~vi   82 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ-VDIVI   82 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT-CSEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC-CCEEE
Confidence            35799999999999999999998999999998875      12 22   233455432 344443 45555667 99999


Q ss_pred             ECCCCc--hhHHHHHhhccCC---CEEE
Q 017901          243 DTIGAP--ETERLGLNFLKRG---GHYM  265 (364)
Q Consensus       243 d~~g~~--~~~~~~~~~l~~~---G~~v  265 (364)
                      .+.+..  .....+++.++..   +++|
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           83 SALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             ECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            999853  1334455555433   4776

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.21  E-value=0.016  Score=49.52  Aligned_cols=74  Identities=22%  Similarity=0.292  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHH----cCCc-ee--eeCCChh-HHHHhc------CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLA----AGAE-QA--VDYSSKD-IELAIK------GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~----~g~~-~v--~~~~~~~-~~~~i~------g~  237 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++.+. +. ..+    .+.. ..  .|..+.+ +...+.      ++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            46889999999999999999999999999999887553 22 221    2432 12  2333332 222221      45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        86 ~d~vi~~Ag~   95 (248)
T 2pnf_A           86 IDILVNNAGI   95 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.20  E-value=0.025  Score=48.46  Aligned_cols=97  Identities=18%  Similarity=0.295  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee-CCccH--H---HHHHcCCce-e--eeCCChh----HHHHhc-----
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSI--D---RVLAAGAEQ-A--VDYSSKD----IELAIK-----  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~-~~~~~--~---~~~~~g~~~-v--~~~~~~~----~~~~i~-----  235 (364)
                      .+++++|+||++++|..+++.+...|++|+.+. ++.+.  +   .+.+.+... .  .|..+.+    +.+.+.     
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            578999999999999999999999999998874 43332  2   223334321 1  2333321    112211     


Q ss_pred             ----CCccEEEECCCCch----------h---------------HHHHHhhccCCCEEEEEccC
Q 017901          236 ----GKFDAVLDTIGAPE----------T---------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       236 ----g~~D~vid~~g~~~----------~---------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                          +++|++|.+.|...          .               .+.++..++++|++|.++..
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~  149 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA  149 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCCh
Confidence                24999999988420          0               23344456678999998864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.19  E-value=0.0042  Score=53.89  Aligned_cols=72  Identities=18%  Similarity=0.214  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCChh-H---HHHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSKD-I---ELAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~~-~---~~~i~---g~~D~vid~~  245 (364)
                      .++++||+||+|++|..+++.+...|++|+++.++.+...  +..+.. ..|..+.+ .   .+.+.   |++|++|.+.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA  104 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNA  104 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence            5789999999999999999999999999999987654310  011111 22444432 2   22221   4599999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus       105 g~  106 (260)
T 3un1_A          105 GV  106 (260)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.19  E-value=0.012  Score=49.76  Aligned_cols=72  Identities=18%  Similarity=0.194  Sum_probs=49.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh-HHHHhc---CCccEEEECCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-IELAIK---GKFDAVLDTIG  246 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~~~~i~---g~~D~vid~~g  246 (364)
                      +++||+||+|++|..+++.+...|++|+.+.++++.  +...+++...   ..|..+.+ +...+.   ..+|+++.+.|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            368999999999999999999999999999887664  3344443321   23444432 222222   33599999988


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        82 ~   82 (230)
T 3guy_A           82 S   82 (230)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.19  E-value=0.023  Score=46.54  Aligned_cols=94  Identities=15%  Similarity=0.128  Sum_probs=60.7

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcC----------CeEEEeeCCccHHHHHHcCCceee-eC--CChhHHHH---
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASG----------CHVSATCGSKSIDRVLAAGAEQAV-DY--SSKDIELA---  233 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g----------~~vi~~~~~~~~~~~~~~g~~~v~-~~--~~~~~~~~---  233 (364)
                      ..++++++||-.| +|. |..+..+++..|          .+|+++..++....   .++ ..+ ..  ...+....   
T Consensus        18 ~~~~~~~~vLDlG-cG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~---~~~-~~~~~~d~~~~~~~~~~~~   91 (196)
T 2nyu_A           18 QILRPGLRVLDCG-AAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPL---EGA-TFLCPADVTDPRTSQRILE   91 (196)
T ss_dssp             CCCCTTCEEEEET-CCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCC---TTC-EEECSCCTTSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeC-CCC-CHHHHHHHHHhccccccccCCCceEEEEechhcccC---CCC-eEEEeccCCCHHHHHHHHH
Confidence            4468899999999 666 999999999976          68999966553210   011 122 21  12222211   


Q ss_pred             -hc-CCccEEEE-----CCCCc------------hhHHHHHhhccCCCEEEEEcc
Q 017901          234 -IK-GKFDAVLD-----TIGAP------------ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       234 -i~-g~~D~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g~  269 (364)
                       .. +++|+|+.     +++..            ..+..+.+.|++||+++....
T Consensus        92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence             11 24999994     44432            356778999999999998754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.19  E-value=0.024  Score=48.95  Aligned_cols=73  Identities=19%  Similarity=0.296  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc-----CCc-ee--eeCCChh-HHHHhc------C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA-----GAE-QA--VDYSSKD-IELAIK------G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~-----g~~-~v--~~~~~~~-~~~~i~------g  236 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +...++     +.. ..  .|..+.+ +...+.      |
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            46889999999999999999999999999999887653  222222     211 12  3444432 222222      7


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                       +|++|.+.|.
T Consensus        86 -id~lv~~Ag~   95 (260)
T 2z1n_A           86 -ADILVYSTGG   95 (260)
T ss_dssp             -CSEEEECCCC
T ss_pred             -CCEEEECCCC
Confidence             9999999984

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.18  E-value=0.0024  Score=55.70  Aligned_cols=70  Identities=27%  Similarity=0.348  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChh----HHHHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD----IELAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~----~~~~i~---g~~D~vid~~  245 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++.+. ......    ..|..+.+    +.+.+.   |++|++|.+.
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnA  102 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGLGRLDIVVNNA  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            57899999999999999999999999999998876543 111111    12333322    222221   5599999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus       103 g~  104 (266)
T 3uxy_A          103 GV  104 (266)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.18  E-value=0.013  Score=53.32  Aligned_cols=89  Identities=18%  Similarity=0.174  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE--  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~--  249 (364)
                      .|.+|.|.| .|.+|..+++.++.+|++ |++..++.. .+.+.+.|+..+     .++.+.+.. .|+|+.++....  
T Consensus       163 ~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~-aDvV~l~~P~t~~t  235 (364)
T 2j6i_A          163 EGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-----ENIEELVAQ-ADIVTVNAPLHAGT  235 (364)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-----SSHHHHHHT-CSEEEECCCCSTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-----CCHHHHHhc-CCEEEECCCCChHH
Confidence            678999999 899999999999999997 999876653 455667775422     123344445 999999988642  


Q ss_pred             --hH-HHHHhhccCCCEEEEEcc
Q 017901          250 --TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 --~~-~~~~~~l~~~G~~v~~g~  269 (364)
                        .+ ...+..|++++.+|.++.
T Consensus       236 ~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          236 KGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSC
T ss_pred             HHHhCHHHHhhCCCCCEEEECCC
Confidence              22 356788999999998874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.17  E-value=0.013  Score=50.59  Aligned_cols=69  Identities=20%  Similarity=0.317  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc-eeeeCCChh-H---HHHhc---CCccEEEEC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKD-I---ELAIK---GKFDAVLDT  244 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~-~---~~~i~---g~~D~vid~  244 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+. +.     +. ...|..+.+ +   .+.+.   |++|++|.+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n   94 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN   94 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            46889999999999999999999999999999876543 21     11 122444432 2   22221   558999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        95 Ag~   97 (253)
T 2nm0_A           95 AGV   97 (253)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            874

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.16  E-value=0.0076  Score=51.30  Aligned_cols=96  Identities=20%  Similarity=0.280  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+.+++|+||+|.+|..+++.+...|+  +|+++.++... ......++.. ..|..+. ++...+.+ +|++|.|.|..
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi~~ag~~   95 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG-HDVGFCCLGTT   95 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSS-CSEEEECCCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcC-CCEEEECCCcc
Confidence            367899999999999999999999999  99999886543 1111112211 1233332 33334445 99999999964


Q ss_pred             h--------------hHHHHHhhccC--CCEEEEEccC
Q 017901          249 E--------------TERLGLNFLKR--GGHYMTLHGE  270 (364)
Q Consensus       249 ~--------------~~~~~~~~l~~--~G~~v~~g~~  270 (364)
                      .              .....++.+++  .+++|.++..
T Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~  133 (242)
T 2bka_A           96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK  133 (242)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccC
Confidence            1              11233344433  3689888764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.15  E-value=0.014  Score=50.89  Aligned_cols=72  Identities=14%  Similarity=0.209  Sum_probs=49.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC--c-ee--eeCCChh-HHHHhc------CCccEE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA--E-QA--VDYSSKD-IELAIK------GKFDAV  241 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~--~-~v--~~~~~~~-~~~~i~------g~~D~v  241 (364)
                      ++++|+||+|++|..+++.+...|++|+++.++++.  +...++..  . ..  .|..+.+ +...+.      |++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            789999999999999999999999999999887653  23333321  1 12  2444432 222221      458999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      |++.|.
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.15  E-value=0.024  Score=49.95  Aligned_cols=94  Identities=21%  Similarity=0.185  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH---HHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI---DRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~---~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~~  248 (364)
                      .++|+|+||+|.+|..+++.+...| .+|+++.++...   ..+...++..+ .|..+. ++...+.+ +|+||.+.+..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~-~d~vi~~a~~~   83 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNG-AYATFIVTNYW   83 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTT-CSEEEECCCHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhc-CCEEEEeCCCC
Confidence            4689999999999999999888888 899999887553   22344555432 344443 44555557 99999998742


Q ss_pred             h---------hHHHHHhhccC--CCEEEEEcc
Q 017901          249 E---------TERLGLNFLKR--GGHYMTLHG  269 (364)
Q Consensus       249 ~---------~~~~~~~~l~~--~G~~v~~g~  269 (364)
                      .         .....++.++.  -+++|..+.
T Consensus        84 ~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           84 ESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             HHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             ccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            1         12344444443  257887554

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.14  E-value=0.015  Score=49.87  Aligned_cols=74  Identities=19%  Similarity=0.366  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce-e--eeCCChh-HHHHhc------CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ-A--VDYSSKD-IELAIK------GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~-v--~~~~~~~-~~~~i~------g~~  238 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++.+. +    .+.+.+... .  .|..+.+ +...+.      +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999887653 2    223334321 2  2333332 222221      359


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        90 d~vi~~Ag~   98 (255)
T 1fmc_A           90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.14  E-value=0.03  Score=50.40  Aligned_cols=88  Identities=14%  Similarity=0.141  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|.++.|.| .|.+|...++.++.+|.+|++..++.+.+.+.+.|+..    .  ++.+.+.. .|+|+.++.....   
T Consensus       149 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~----~--~l~~~l~~-aDvVil~vp~~~~t~~  220 (334)
T 2dbq_A          149 YGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEF----K--PLEDLLRE-SDFVVLAVPLTRETYH  220 (334)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEE----C--CHHHHHHH-CSEEEECCCCCTTTTT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCccc----C--CHHHHHhh-CCEEEECCCCChHHHH
Confidence            567999999 89999999999999999999998776655555666531    1  23333444 8999999987532   


Q ss_pred             -H-HHHHhhccCCCEEEEEcc
Q 017901          251 -E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~  269 (364)
                       + ......++++..++.++.
T Consensus       221 ~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          221 LINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CBCHHHHHHSCTTCEEEECSC
T ss_pred             hhCHHHHhcCCCCcEEEECCC
Confidence             2 355778999999988873

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.14  E-value=0.026  Score=49.90  Aligned_cols=90  Identities=19%  Similarity=0.292  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-----H-HHH---HHcCCcee-eeCCCh-hHHHHhcCCccEEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-----I-DRV---LAAGAEQA-VDYSSK-DIELAIKGKFDAVLD  243 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-----~-~~~---~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid  243 (364)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++..     + ..+   ...++..+ .|..+. ++...+.+ +|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQ-VDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTT-CSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhC-CCEEEE
Confidence            357999999999999999999999999999988632     2 222   23344322 244443 45555667 999999


Q ss_pred             CCCCc------hhHHHHHhhccCCC---EEE
Q 017901          244 TIGAP------ETERLGLNFLKRGG---HYM  265 (364)
Q Consensus       244 ~~g~~------~~~~~~~~~l~~~G---~~v  265 (364)
                      +.+..      ......++.++..|   ++|
T Consensus        83 ~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           83 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             CCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            98853      12345555555443   776

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.13  E-value=0.032  Score=51.12  Aligned_cols=80  Identities=21%  Similarity=0.228  Sum_probs=52.8

Q ss_pred             Hhccc-CCCCEEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccH-----------------HHHHHcCCce-e--eeC
Q 017901          168 CAARM-SEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI-----------------DRVLAAGAEQ-A--VDY  225 (364)
Q Consensus       168 ~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~-----------------~~~~~~g~~~-v--~~~  225 (364)
                      ....+ ..++++||+||++++|++.++.+.. .|++|+++.++.+.                 +.+++.|... .  .|.
T Consensus        39 ~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dv  118 (405)
T 3zu3_A           39 TEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDA  118 (405)
T ss_dssp             HHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             hcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCC
Confidence            33455 5678899999999999998888888 89999988653221                 1345556432 2  233


Q ss_pred             CChh----HHHHhc---CCccEEEECCCC
Q 017901          226 SSKD----IELAIK---GKFDAVLDTIGA  247 (364)
Q Consensus       226 ~~~~----~~~~i~---g~~D~vid~~g~  247 (364)
                      .+.+    +.+.+.   |++|+++++.|.
T Consensus       119 td~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          119 FSDEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             TSHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            3332    222222   679999999886

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.13  E-value=0.017  Score=49.79  Aligned_cols=74  Identities=22%  Similarity=0.390  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-HHHH----HcCCce---eeeCCChh-HH---HHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVL----AAGAEQ---AVDYSSKD-IE---LAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~~~~----~~g~~~---v~~~~~~~-~~---~~i~---g~  237 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++.. . +.+.    +.+...   ..|..+.+ +.   +.+.   ++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999999999999999999999999987543 2 2222    224321   22444432 22   2221   55


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999884

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.13  E-value=0.018  Score=50.82  Aligned_cols=90  Identities=22%  Similarity=0.264  Sum_probs=60.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-------cH-HH---HHHcCCcee-eeCCCh-hHHHHhcCCccEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-------SI-DR---VLAAGAEQA-VDYSSK-DIELAIKGKFDAV  241 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-------~~-~~---~~~~g~~~v-~~~~~~-~~~~~i~g~~D~v  241 (364)
                      +.+|+|+||+|.+|..+++.+...|.+|++++++.       ++ ..   +...++..+ .|..+. ++...+.+ +|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~-~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ-VDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT-CSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC-CCEE
Confidence            45799999999999999999988899999998875       32 22   233455432 344443 45555557 9999


Q ss_pred             EECCCCc--hhHHHHHhhccCC---CEEE
Q 017901          242 LDTIGAP--ETERLGLNFLKRG---GHYM  265 (364)
Q Consensus       242 id~~g~~--~~~~~~~~~l~~~---G~~v  265 (364)
                      |.+.|..  ......++.++..   .++|
T Consensus        81 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           81 ICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             EECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             EECCcccccccHHHHHHHHHhcCCceEEe
Confidence            9999863  1334455555433   4666

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.12  E-value=0.017  Score=49.84  Aligned_cols=73  Identities=18%  Similarity=0.221  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCce-e--eeCCChh----HHHHh----cCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAEQ-A--VDYSSKD----IELAI----KGK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~~-v--~~~~~~~----~~~~i----~g~  237 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+.  +..   .+.+... .  .|..+.+    +.+.+    .|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            46889999999999999999999999999999887543  222   2224321 1  2444432    22222    255


Q ss_pred             ccEEEECCC
Q 017901          238 FDAVLDTIG  246 (364)
Q Consensus       238 ~D~vid~~g  246 (364)
                      +|++|++.|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            899999995

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.11  E-value=0.018  Score=49.12  Aligned_cols=73  Identities=15%  Similarity=0.288  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HHHHHc-CCc-ee--eeCCChh-HH---HHhc---C--Cc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DRVLAA-GAE-QA--VDYSSKD-IE---LAIK---G--KF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~~~~~-g~~-~v--~~~~~~~-~~---~~i~---g--~~  238 (364)
                      +++++|+||+|.+|..+++.+...|  ++|+++.++.+. +.+.++ +.. .+  .|..+.+ +.   +.+.   |  ++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i   82 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence            5789999999999999999999999  999999887654 444444 222 12  2333332 22   2221   3  59


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        83 d~li~~Ag~   91 (250)
T 1yo6_A           83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999999874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.11  E-value=0.017  Score=49.80  Aligned_cols=74  Identities=18%  Similarity=0.301  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH-H-H---HHHcCCce-e--eeCCChh-HHHHhc------CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI-D-R---VLAAGAEQ-A--VDYSSKD-IELAIK------GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-~-~---~~~~g~~~-v--~~~~~~~-~~~~i~------g~  237 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.+ +.+. + .   +.+.+... +  .|..+.+ +.+.+.      |+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999988 5432 2 2   22334321 2  2434332 222221      45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        86 id~li~~Ag~   95 (261)
T 1gee_A           86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.11  E-value=0.036  Score=48.97  Aligned_cols=92  Identities=15%  Similarity=0.214  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCc--eeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~--~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+++++|.| +|++|.+++..+...|+ +|+.+.++.++  +++.+++..  .+.+.  .++.+.+.+ +|+||+|++..
T Consensus       140 ~~~~vlVlG-aGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~~-aDivIn~t~~~  215 (297)
T 2egg_A          140 DGKRILVIG-AGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL--AEAETRLAE-YDIIINTTSVG  215 (297)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--HHHHHTGGG-CSEEEECSCTT
T ss_pred             CCCEEEEEC-cHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--HHHHhhhcc-CCEEEECCCCC
Confidence            678999999 68999999999999998 88888777554  455666652  23221  233444445 99999999875


Q ss_pred             hh-----HHHHHhhccCCCEEEEEcc
Q 017901          249 ET-----ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       249 ~~-----~~~~~~~l~~~G~~v~~g~  269 (364)
                      ..     .......++++..++.+..
T Consensus       216 ~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          216 MHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            21     0112346777777777753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.11  E-value=0.018  Score=49.51  Aligned_cols=97  Identities=12%  Similarity=0.184  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH---HHHHHc--CCc-e--eeeCCCh--hHHHHhc------C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI---DRVLAA--GAE-Q--AVDYSSK--DIELAIK------G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~---~~~~~~--g~~-~--v~~~~~~--~~~~~i~------g  236 (364)
                      .+++++|+||+|++|..+++.+...|++ |+.+.++...   +.+.+.  +.. .  ..|..+.  ++...+.      |
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999996 8888776532   223332  211 1  1244432  2222221      4


Q ss_pred             CccEEEECCCCc--hh---------------HHHHHhhccC-----CCEEEEEccC
Q 017901          237 KFDAVLDTIGAP--ET---------------ERLGLNFLKR-----GGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~--~~---------------~~~~~~~l~~-----~G~~v~~g~~  270 (364)
                      ++|++|.+.|..  ..               .+.+++.+..     +|++|.++..
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~  139 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECch
Confidence            599999999842  11               2334444432     5889988754

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.11  E-value=0.015  Score=49.69  Aligned_cols=73  Identities=12%  Similarity=0.104  Sum_probs=44.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHH------HHhc--CCccEEEEC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIE------LAIK--GKFDAVLDT  244 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~------~~i~--g~~D~vid~  244 (364)
                      .+++++|+||+|++|..+++.+.. |++|+++.++.+. +.+.+......+..+-.+..      +.+.  +++|++|.+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~   82 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA   82 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence            368899999999999998888765 8999999887654 33333322222222111111      1111  459999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        83 Ag~   85 (245)
T 3e9n_A           83 AAV   85 (245)
T ss_dssp             C--
T ss_pred             CCc
Confidence            985

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.11  E-value=0.016  Score=50.81  Aligned_cols=74  Identities=26%  Similarity=0.331  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce-e--eeCCChh-HHHHh---c---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ-A--VDYSSKD-IELAI---K---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~-v--~~~~~~~-~~~~i---~---g~~  238 (364)
                      .+++++|+||+|++|..+++.+...|++|+++.++.+. + .   +++.+... .  .|..+.+ +...+   .   +++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            36789999999999999999998899999998766543 2 2   22234331 1  2444432 22222   1   459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus       123 d~li~~Ag~  131 (285)
T 2c07_A          123 DILVNNAGI  131 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.09  E-value=0.021  Score=50.06  Aligned_cols=94  Identities=17%  Similarity=0.159  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCC----ceeeeCCChhHHHHhcCCccEEEECC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGA----EQAVDYSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~----~~v~~~~~~~~~~~i~g~~D~vid~~  245 (364)
                      -.+++++|.| +|++|.+++..+...|+ +|+.+.|+.++  +++.+++.    ..+...+.+++.+.+.+ +|+||+|+
T Consensus       125 l~~k~vlVlG-aGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~-~DiVInaT  202 (283)
T 3jyo_A          125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA-ADGVVNAT  202 (283)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHH-SSEEEECS
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhc-CCEEEECC
Confidence            4678999999 59999999999999999 68888777654  33333321    11222222344455555 99999998


Q ss_pred             CCch----hHHHHHhhccCCCEEEEEc
Q 017901          246 GAPE----TERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       246 g~~~----~~~~~~~~l~~~G~~v~~g  268 (364)
                      +..-    ........++++..++.+-
T Consensus       203 p~Gm~~~~~~pi~~~~l~~~~~v~Dlv  229 (283)
T 3jyo_A          203 PMGMPAHPGTAFDVSCLTKDHWVGDVV  229 (283)
T ss_dssp             STTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred             CCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence            7420    0112245677776666654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.08  E-value=0.021  Score=49.31  Aligned_cols=74  Identities=23%  Similarity=0.345  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-HHHHhc-------CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-IELAIK-------GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~~~~i~-------g~  237 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.++++.  +.   +.+.+...   ..|..+.+ +...+.       ++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46889999999999999999999999999999887553  22   23334321   12333332 222111       45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999884

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.07  E-value=0.025  Score=51.95  Aligned_cols=89  Identities=15%  Similarity=0.044  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      .|.++.|.| .|.+|..+++.++.+|.+|++..++.. .+...+.|+..+     .++.+.+.. .|+|+.++....   
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l~ell~~-aDvV~l~~Plt~~t~  262 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----ATREDMYPV-CDVVTLNCPLHPETE  262 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHGGG-CSEEEECSCCCTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec-----CCHHHHHhc-CCEEEEecCCchHHH
Confidence            578999999 999999999999999999999876643 455666776422     123344444 899999988531   


Q ss_pred             -hH-HHHHhhccCCCEEEEEcc
Q 017901          250 -TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~  269 (364)
                       .+ ...+..|+++..+|.++.
T Consensus       263 ~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          263 HMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             HHhhHHHHhhCCCCCEEEECCC
Confidence             22 466788999999998874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.07  E-value=0.021  Score=49.32  Aligned_cols=73  Identities=21%  Similarity=0.290  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHH----cCCc-e--eeeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLA----AGAE-Q--AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~----~g~~-~--v~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.++...  +.+.+    .+.. .  ..|..+.+ +   .+.+.   |+
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999998665432  22222    2211 1  23444432 2   22221   45


Q ss_pred             ccEEEECCC
Q 017901          238 FDAVLDTIG  246 (364)
Q Consensus       238 ~D~vid~~g  246 (364)
                      +|++|.+.|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999999

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.05  E-value=0.021  Score=49.50  Aligned_cols=74  Identities=24%  Similarity=0.334  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH-H----HHHHcCCce-e--eeCCChh-HHHHhc------CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI-D----RVLAAGAEQ-A--VDYSSKD-IELAIK------GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-~----~~~~~g~~~-v--~~~~~~~-~~~~i~------g~  237 (364)
                      .+++++|+||+|.+|..+++.+...|++|+++.+ +.+. +    .+.+.+... .  .|..+.+ +...+.      ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999987 4332 1    223334432 2  2444432 222221      45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       100 ~d~vi~~Ag~  109 (274)
T 1ja9_A          100 LDFVMSNSGM  109 (274)
T ss_dssp             EEEEECCCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.04  E-value=0.024  Score=48.29  Aligned_cols=74  Identities=22%  Similarity=0.334  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH-H----HHHHcCCce-e--eeCCChh-HHHHhc------CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI-D----RVLAAGAEQ-A--VDYSSKD-IELAIK------GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~-~----~~~~~g~~~-v--~~~~~~~-~~~~i~------g~  237 (364)
                      .+++++|+|++|.+|..+++.+...|++|+++ .+++.. +    .+.+.+... .  .|..+.+ +...+.      ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999998 444432 2    223334321 2  2444432 222111      45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999885

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.04  E-value=0.017  Score=46.93  Aligned_cols=99  Identities=15%  Similarity=0.127  Sum_probs=63.6

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCce--eeeCCChhHHHHhcCCccEE
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQ--AVDYSSKDIELAIKGKFDAV  241 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~--v~~~~~~~~~~~i~g~~D~v  241 (364)
                      ...++++++||=.| +| .|..+..+++. +.+|+++..++.. +.    +.+.|.+.  ++.....++.....+++|+|
T Consensus        17 ~~~~~~~~~vLDiG-cG-~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v   93 (185)
T 3mti_A           17 AEVLDDESIVVDAT-MG-NGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAA   93 (185)
T ss_dssp             HTTCCTTCEEEESC-CT-TSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEE
T ss_pred             HHhCCCCCEEEEEc-CC-CCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEE
Confidence            35678999999988 44 48888888887 8899999877653 33    34445432  33322222221223459998


Q ss_pred             EECCCC-----------c----hhHHHHHhhccCCCEEEEEccC
Q 017901          242 LDTIGA-----------P----ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +-+.+.           .    ..+..+.+.|+|||+++.+...
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  137 (185)
T 3mti_A           94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY  137 (185)
T ss_dssp             EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred             EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            866321           0    2357888999999999887643

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.04  E-value=0.011  Score=52.82  Aligned_cols=100  Identities=25%  Similarity=0.275  Sum_probs=66.0

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HH----HHHcCCce--eeeCCChhHHHHhcCC
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DR----VLAAGAEQ--AVDYSSKDIELAIKGK  237 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~----~~~~g~~~--v~~~~~~~~~~~i~g~  237 (364)
                      .....++++++||-.| +|. |..+..+++..+  .+|+++..+++. +.    +...|...  +...+-.+.... .++
T Consensus        68 ~~~l~~~~~~~VLDiG-cG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~-~~~  144 (317)
T 1dl5_A           68 MEWVGLDKGMRVLEIG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE-FSP  144 (317)
T ss_dssp             HHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCC
T ss_pred             HHhcCCCCcCEEEEec-CCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc-CCC
Confidence            3566788999999999 554 888888888754  469999776653 33    33445443  222221121111 134


Q ss_pred             ccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|+|+....-......+.+.|+|||+++..-.
T Consensus       145 fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~  176 (317)
T 1dl5_A          145 YDVIFVTVGVDEVPETWFTQLKEGGRVIVPIN  176 (317)
T ss_dssp             EEEEEECSBBSCCCHHHHHHEEEEEEEEEEBC
T ss_pred             eEEEEEcCCHHHHHHHHHHhcCCCcEEEEEEC
Confidence            99999876655455788899999999887644

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.04  E-value=0.014  Score=52.31  Aligned_cols=97  Identities=22%  Similarity=0.181  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-----cC--Ccee--eeCCChh-HHHHhcCCccEE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-----AG--AEQA--VDYSSKD-IELAIKGKFDAV  241 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-----~g--~~~v--~~~~~~~-~~~~i~g~~D~v  241 (364)
                      .++.+|||+||+|.+|..+++.+...|.+|+++.++... ..+.+     .+  ...+  .|..+.+ +.+.+.+ +|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG-AAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT-CSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcC-CCEE
Confidence            457899999999999999999998899999999887543 22211     12  2212  2333332 2233335 9999


Q ss_pred             EECCCCch--------------hHHHHHhhcc--C-CCEEEEEccC
Q 017901          242 LDTIGAPE--------------TERLGLNFLK--R-GGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~--------------~~~~~~~~l~--~-~G~~v~~g~~  270 (364)
                      |.+.+...              .....++.++  . .+++|.++..
T Consensus        88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~  133 (342)
T 1y1p_A           88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST  133 (342)
T ss_dssp             EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred             EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence            99987431              1223444443  2 3789988754

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.03  E-value=0.013  Score=49.48  Aligned_cols=95  Identities=19%  Similarity=0.289  Sum_probs=63.8

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcC-------CeEEEeeCCccH-HHH----HHcC-----C--ceeeeCCChh-H
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG-------CHVSATCGSKSI-DRV----LAAG-----A--EQAVDYSSKD-I  230 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g-------~~vi~~~~~~~~-~~~----~~~g-----~--~~v~~~~~~~-~  230 (364)
                      .++++++||-.| +|. |..+..+++..+       .+|+++..+++. +.+    .+.+     .  -.+...+..+ +
T Consensus        81 ~~~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~  158 (227)
T 1r18_A           81 HLKPGARILDVG-SGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY  158 (227)
T ss_dssp             TCCTTCEEEEES-CTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC
T ss_pred             hCCCCCEEEEEC-CCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC
Confidence            578999999999 554 888889998776       489999777653 333    2222     1  1222222211 1


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       231 ~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .+  .+++|+|+.+..-......+.+.|++||+++..-.
T Consensus       159 ~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~  195 (227)
T 1r18_A          159 PP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  195 (227)
T ss_dssp             GG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             Cc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence            11  13499999887766567899999999999887643

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.03  E-value=0.019  Score=51.88  Aligned_cols=93  Identities=15%  Similarity=0.204  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCcee-------------eeCCCh-----hHHHH
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-------------VDYSSK-----DIELA  233 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v-------------~~~~~~-----~~~~~  233 (364)
                      -.|++|.|.| .|.+|+.+++.++.+|++|++...+.. .+...++++..+             +.....     +..+.
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~  251 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVART  251 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhcCHHHHhh
Confidence            4789999999 899999999999999999995544433 244555665322             111000     11112


Q ss_pred             hcCCccEEEECCCCchhH-HHHHhhccCCCEEEEEcc
Q 017901          234 IKGKFDAVLDTIGAPETE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       234 i~g~~D~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~  269 (364)
                      + + .++|+++..++ .. ..+.+.|+.+|.++.-+.
T Consensus       252 l-k-~~iVie~AN~p-~t~~eA~~~L~~~gIlv~Pd~  285 (355)
T 1c1d_A          252 L-D-CSVVAGAANNV-IADEAASDILHARGILYAPDF  285 (355)
T ss_dssp             C-C-CSEECCSCTTC-BCSHHHHHHHHHTTCEECCHH
T ss_pred             C-C-CCEEEECCCCC-CCCHHHHHHHHhCCEEEECCe
Confidence            2 3 89999999887 44 477899999998876653

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.03  E-value=0.021  Score=50.28  Aligned_cols=74  Identities=12%  Similarity=0.191  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC---eEEEeeCCccH--HHHHHc-----CCce---eeeCCCh-hHH---HHhc-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKSI--DRVLAA-----GAEQ---AVDYSSK-DIE---LAIK-  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~---~vi~~~~~~~~--~~~~~~-----g~~~---v~~~~~~-~~~---~~i~-  235 (364)
                      .|+++||+||++++|.++++.+...|+   +|+.+.++.+.  +...++     +...   ..|..+. ++.   +.+. 
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468999999999999999988877777   89988887653  222222     3221   2244443 222   2222 


Q ss_pred             --CCccEEEECCCC
Q 017901          236 --GKFDAVLDTIGA  247 (364)
Q Consensus       236 --g~~D~vid~~g~  247 (364)
                        |++|++|++.|.
T Consensus       112 ~~g~iD~lVnnAG~  125 (287)
T 3rku_A          112 EFKDIDILVNNAGK  125 (287)
T ss_dssp             GGCSCCEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence              569999999884

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.03  E-value=0.014  Score=51.47  Aligned_cols=37  Identities=22%  Similarity=0.133  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee-CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKS  210 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~-~~~~  210 (364)
                      .+++++|+|+++++|.++++.+...|++|+.+. ++.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~   45 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA   45 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHH
Confidence            468999999999999999999999999999998 7754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.02  E-value=0.013  Score=50.39  Aligned_cols=73  Identities=21%  Similarity=0.231  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH--HHHHHcCCce---eeeCCChh-H---HHHhc---CCccE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD-I---ELAIK---GKFDA  240 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D~  240 (364)
                      |++++|+||++++|..+++.+...|  ++|+.+.++++.  +...+++...   ..|..+.+ .   .+.+.   |++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            5789999999999999988776664  688888877654  3334444321   22444432 2   22221   56999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      ++++.|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999885

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.01  E-value=0.017  Score=49.60  Aligned_cols=76  Identities=24%  Similarity=0.297  Sum_probs=49.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee-CCcc-H----HHHHHcCCce-e--eeCCChh----HHHHhc---
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKS-I----DRVLAAGAEQ-A--VDYSSKD----IELAIK---  235 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~-~~~~-~----~~~~~~g~~~-v--~~~~~~~----~~~~i~---  235 (364)
                      ..+++++||+||++++|..+++.+...|++|+.+. ++.. .    +.+.+.+... .  .|..+.+    +.+.+.   
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            35678999999999999999999999999999886 3332 2    2234444332 2  2333322    222222   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|++|.+.|.
T Consensus        90 g~id~lv~~Ag~  101 (256)
T 3ezl_A           90 GEIDVLVNNAGI  101 (256)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            459999999884

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.01  E-value=0.027  Score=49.20  Aligned_cols=75  Identities=13%  Similarity=0.233  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH---HHH-HHcCCcee--eeCCChh----HHHHhc---CC
Q 017901          173 SEGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI---DRV-LAAGAEQA--VDYSSKD----IELAIK---GK  237 (364)
Q Consensus       173 ~~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~-~~~g~~~v--~~~~~~~----~~~~i~---g~  237 (364)
                      -.+++++|+||+  +++|..+++.+...|++|+.+.++...   +.+ .+.+....  .|..+.+    +.+.+.   |+
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            457899999988  559999999999999999999887622   222 23332222  2333332    222222   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999884

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.00  E-value=0.024  Score=48.63  Aligned_cols=98  Identities=21%  Similarity=0.218  Sum_probs=65.2

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc---eeeeCCChhHHHHhcCCc
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~---~v~~~~~~~~~~~i~g~~  238 (364)
                      .....+.++.+||-.| +|. |..+..+++..|++|+++..++.. +.    +.+.|..   .+...+-.++..  .+.+
T Consensus        29 ~~~~~~~~~~~VLDiG-cG~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~f  104 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLG-SGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA--NEKC  104 (256)
T ss_dssp             HHHTCCCTTCEEEEET-CTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--SSCE
T ss_pred             HHhcCCCCCCEEEEEC-CCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--CCCC
Confidence            3566788999999999 444 888899999889999999776653 33    3344432   122222222111  2349


Q ss_pred             cEEEEC-----CC-CchhHHHHHhhccCCCEEEEEc
Q 017901          239 DAVLDT-----IG-APETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       239 D~vid~-----~g-~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      |+|+..     .. -...+..+.+.|+|||+++...
T Consensus       105 D~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          105 DVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             EEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            999862     21 2346889999999999998764

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.99  E-value=0.05  Score=50.47  Aligned_cols=95  Identities=15%  Similarity=0.160  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHHhc-CCccEEEECCCCchh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPET  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~i~-g~~D~vid~~g~~~~  250 (364)
                      .+++|+|.| .|.+|..+++.++..|..|+++..+++. +.+++.|...++ |..+.+...... .++|+++-+++....
T Consensus         3 ~~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~   81 (413)
T 3l9w_A            3 HGMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT   81 (413)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence            346799999 7999999999999999999999887776 778888876332 444555554443 349999999998633


Q ss_pred             H---HHHHhhccCCCEEEEEcc
Q 017901          251 E---RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ~---~~~~~~l~~~G~~v~~g~  269 (364)
                      .   -..++.+.+.-+++....
T Consensus        82 n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           82 NLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHHHHHhCCCCeEEEEEC
Confidence            2   344455567767776654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.99  E-value=0.024  Score=48.21  Aligned_cols=73  Identities=14%  Similarity=0.220  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH-H-H---HHHcCCce-e---eeCCChh-HH---HHhc---CC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI-D-R---VLAAGAEQ-A---VDYSSKD-IE---LAIK---GK  237 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~-~-~---~~~~g~~~-v---~~~~~~~-~~---~~i~---g~  237 (364)
                      +++++|+||+|.+|..+++.+...|++|+++ .++.+. + .   +.+.+... .   .|..+.+ +.   +.+.   ++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999998 665443 2 1   23334321 1   2444432 22   2221   45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus        81 ~d~li~~Ag~   90 (245)
T 2ph3_A           81 LDTLVNNAGI   90 (245)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.97  E-value=0.024  Score=51.29  Aligned_cols=89  Identities=20%  Similarity=0.141  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch----
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~----  249 (364)
                      .|.++.|.| .|.+|...++.++.+|.+|++..+........+.|+..+.     ++.+.+.. .|+|+-++....    
T Consensus       167 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~-----~l~ell~~-aDvV~l~~P~t~~t~~  239 (347)
T 1mx3_A          167 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVS-----TLQDLLFH-SDCVTLHCGLNEHNHH  239 (347)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECS-----SHHHHHHH-CSEEEECCCCCTTCTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecC-----CHHHHHhc-CCEEEEcCCCCHHHHH
Confidence            578999999 8999999999999999999988765444444566764221     23333334 899999887531    


Q ss_pred             hH-HHHHhhccCCCEEEEEcc
Q 017901          250 TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~~-~~~~~~l~~~G~~v~~g~  269 (364)
                      .+ ...+..++++..+|.++.
T Consensus       240 li~~~~l~~mk~gailIN~ar  260 (347)
T 1mx3_A          240 LINDFTVKQMRQGAFLVNTAR  260 (347)
T ss_dssp             SBSHHHHTTSCTTEEEEECSC
T ss_pred             HhHHHHHhcCCCCCEEEECCC
Confidence            22 456788999999998874

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.97  E-value=0.11  Score=46.35  Aligned_cols=135  Identities=13%  Similarity=0.089  Sum_probs=77.6

Q ss_pred             EEEEEcCCchHHHHH-HHHHHHcCCeEEEeeCCcc-H--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhH
Q 017901          177 RLLVLGGGGAVGFAA-VQFSVASGCHVSATCGSKS-I--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETE  251 (364)
Q Consensus       177 ~vli~g~~g~~G~~~-~~~a~~~g~~vi~~~~~~~-~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~  251 (364)
                      +|.|.| +|.+|... +..++..+.+++++++... +  ..+.++|...++    .++.+.+. ..+|+|+.|+......
T Consensus         2 ~vgiiG-~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~----~~~~~~l~~~~~D~V~i~tp~~~h~   76 (332)
T 2glx_A            2 RWGLIG-ASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV----TSVEELVGDPDVDAVYVSTTNELHR   76 (332)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB----SCHHHHHTCTTCCEEEECSCGGGHH
T ss_pred             eEEEEc-ccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc----CCHHHHhcCCCCCEEEEeCChhHhH
Confidence            588999 79999876 5444337889888865433 2  445667764332    12334443 2399999999987667


Q ss_pred             HHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          252 RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      ..+..+++.| +-|.+..+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.+-
T Consensus        77 ~~~~~al~~G-k~v~~ekP~~----------~~~~----~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG  141 (332)
T 2glx_A           77 EQTLAAIRAG-KHVLCEKPLA----------MTLE----DAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIG  141 (332)
T ss_dssp             HHHHHHHHTT-CEEEECSSSC----------SSHH----HHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTTS
T ss_pred             HHHHHHHHCC-CeEEEeCCCc----------CCHH----HHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCCC
Confidence            7777788775 4445544310          0111    11111111223455544333332345678888899888664

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.96  E-value=0.016  Score=49.49  Aligned_cols=90  Identities=12%  Similarity=0.093  Sum_probs=56.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhc---CCccEEEECCCCch--
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIK---GKFDAVLDTIGAPE--  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~---g~~D~vid~~g~~~--  249 (364)
                      ++++|+||+|.+|..+++.+...|++|+++.++.+...     .....|..+. ++...+.   +++|++|.+.|...  
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~   76 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----ADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTA   76 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTTS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----ccccCCcccHHHHHHHHHHcCCCccEEEECCCCCCcc
Confidence            36999999999999999999889999999988654310     0111111111 1222222   34999999988532  


Q ss_pred             ----------------hHHHHHhhccC--CCEEEEEccC
Q 017901          250 ----------------TERLGLNFLKR--GGHYMTLHGE  270 (364)
Q Consensus       250 ----------------~~~~~~~~l~~--~G~~v~~g~~  270 (364)
                                      .++.+.+.++.  .+++|.++..
T Consensus        77 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  115 (255)
T 2dkn_A           77 ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI  115 (255)
T ss_dssp             SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence                            12333344433  3899988764

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=95.96  E-value=0.052  Score=47.46  Aligned_cols=97  Identities=13%  Similarity=0.178  Sum_probs=70.9

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ...||+.......|.+..---.|++++|.|.+..+|.=+..++...+++|+.+.+                  .+.++.+
T Consensus       157 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs------------------~T~dl~~  218 (303)
T 4b4u_A          157 AYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHS------------------RTQNLPE  218 (303)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT------------------TCSSHHH
T ss_pred             cccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecC------------------CCCCHHH
Confidence            3446665555555543333347999999999999999999999999999876532                  2233444


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..+. +|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       219 ~~~~-ADIvV~A~G~p~~i~--~d~vk~GavVIDVGin  253 (303)
T 4b4u_A          219 LVKQ-ADIIVGAVGKAELIQ--KDWIKQGAVVVDAGFH  253 (303)
T ss_dssp             HHHT-CSEEEECSCSTTCBC--GGGSCTTCEEEECCCB
T ss_pred             Hhhc-CCeEEeccCCCCccc--cccccCCCEEEEecee
Confidence            4444 999999999984433  4689999999999965

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.96  E-value=0.029  Score=50.67  Aligned_cols=75  Identities=15%  Similarity=0.244  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CC-eEEEeeCCccH-H-HHHHcC---Cce-eeeCCChh-HHHHhcCCccEEEE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVAS-GC-HVSATCGSKSI-D-RVLAAG---AEQ-AVDYSSKD-IELAIKGKFDAVLD  243 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~-g~-~vi~~~~~~~~-~-~~~~~g---~~~-v~~~~~~~-~~~~i~g~~D~vid  243 (364)
                      -.+++|||+||+|.+|..+++.+... |. +|+++.+++.. . ....+.   ... ..|..+.+ +...+.+ +|+||.
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-~D~Vih   97 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEG-VDICIH   97 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTT-CSEEEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhc-CCEEEE
Confidence            35789999999999999999988888 97 99999887654 2 223332   211 22444433 3344446 999999


Q ss_pred             CCCCc
Q 017901          244 TIGAP  248 (364)
Q Consensus       244 ~~g~~  248 (364)
                      +.+..
T Consensus        98 ~Aa~~  102 (344)
T 2gn4_A           98 AAALK  102 (344)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99853

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.96  E-value=0.022  Score=48.30  Aligned_cols=99  Identities=19%  Similarity=0.200  Sum_probs=64.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHHcCCc--e--eeeC--CChhHHHHhcCCc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAE--Q--AVDY--SSKDIELAIKGKF  238 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~~g~~--~--v~~~--~~~~~~~~i~g~~  238 (364)
                      +...++||++||=.|+  +.|..+..+|+..|.  +|+++..+++. +.+++.-..  .  .+..  ...+......+.+
T Consensus        71 ~~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~v  148 (233)
T 4df3_A           71 IELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGV  148 (233)
T ss_dssp             SCCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCE
T ss_pred             hhcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceE
Confidence            4567999999999994  358899999998875  79999777664 444332211  1  1211  1111111111349


Q ss_pred             cEEEECCCCc----hhHHHHHhhccCCCEEEEEc
Q 017901          239 DAVLDTIGAP----ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       239 D~vid~~g~~----~~~~~~~~~l~~~G~~v~~g  268 (364)
                      |+||....-+    ..+.++.+.|+|||+++..-
T Consensus       149 DvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i  182 (233)
T 4df3_A          149 DGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAI  182 (233)
T ss_dssp             EEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence            9988766544    24677888999999998763

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=95.93  E-value=0.0071  Score=51.17  Aligned_cols=74  Identities=12%  Similarity=0.308  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCC-hhHHHHhc-
Q 017901          174 EGQRLLVLGG----------------GGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSS-KDIELAIK-  235 (364)
Q Consensus       174 ~g~~vli~g~----------------~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~i~-  235 (364)
                      .|.+|||+||                +|.+|.+.++.+...|++|+.+.++.........+. .+++... .++.+.+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~-~~~~v~s~~em~~~v~~   80 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNL-SIREITNTKDLLIEMQE   80 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTE-EEEECCSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCe-EEEEHhHHHHHHHHHHH
Confidence            5789999998                789999999999999999999987654311001122 3444443 23334333 


Q ss_pred             --CCccEEEECCCCc
Q 017901          236 --GKFDAVLDTIGAP  248 (364)
Q Consensus       236 --g~~D~vid~~g~~  248 (364)
                        +++|++|.+.+..
T Consensus        81 ~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           81 RVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HGGGCSEEEECSBCC
T ss_pred             hcCCCCEEEEcCccc
Confidence              3499999998853

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.92  E-value=0.012  Score=49.62  Aligned_cols=72  Identities=18%  Similarity=0.348  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhc-
Q 017901          174 EGQRLLVLGG----------------GGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIK-  235 (364)
Q Consensus       174 ~g~~vli~g~----------------~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~-  235 (364)
                      .|+++||+||                +|.+|.+.++.+...|++|+.+.++.....  ..|. .+++..+. ++.+.+. 
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~--~~g~-~~~dv~~~~~~~~~v~~   83 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT--PPFV-KRVDVMTALEMEAAVNA   83 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--CTTE-EEEECCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc--CCCC-eEEccCcHHHHHHHHHH
Confidence            5789999998                589999999999999999998876543211  1122 24454442 3333332 


Q ss_pred             --CCccEEEECCCCc
Q 017901          236 --GKFDAVLDTIGAP  248 (364)
Q Consensus       236 --g~~D~vid~~g~~  248 (364)
                        +++|++|.+.|..
T Consensus        84 ~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           84 SVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HGGGCSEEEECCBCC
T ss_pred             hcCCCCEEEECCccc
Confidence              4599999998864

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.92  E-value=0.029  Score=49.84  Aligned_cols=89  Identities=19%  Similarity=0.247  Sum_probs=61.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-HH---HHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCCc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DR---VLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~~---~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~~  248 (364)
                      ++|+|+||+|.+|..+++.+...|.+|++++++.. . ..   +...++..+ .|..+. ++...+.+ +|+||.+.+..
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~-~d~vi~~a~~~   90 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKK-VDVVISALAFP   90 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT-CSEEEECCCGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcC-CCEEEECCchh
Confidence            47999999999999999999999999999988753 2 22   234565432 344443 45555667 99999999853


Q ss_pred             --hhHHHHHhhccCC---CEEE
Q 017901          249 --ETERLGLNFLKRG---GHYM  265 (364)
Q Consensus       249 --~~~~~~~~~l~~~---G~~v  265 (364)
                        ......++.++..   +++|
T Consensus        91 ~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           91 QILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             GSTTHHHHHHHHHHHCCCCEEE
T ss_pred             hhHHHHHHHHHHHhcCCCCEEE
Confidence              1334555555433   4666

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.91  E-value=0.023  Score=50.36  Aligned_cols=91  Identities=16%  Similarity=0.125  Sum_probs=59.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee-eeCCChhHHHHhcCCccEEEECCCCch-----
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAPE-----  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~i~g~~D~vid~~g~~~-----  249 (364)
                      .+|+|+||+|.+|..+++.+...|.+|+++.++.....+.  +...+ .|....++.+.+.+ +|+||.+.+...     
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~-~d~Vih~a~~~~~~~~~   79 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAIN--DYEYRVSDYTLEDLINQLND-VDAVVHLAATRGSQGKI   79 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------CCEEEECCCCHHHHHHHTTT-CSEEEECCCCCCSSSCG
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCC--ceEEEEccccHHHHHHhhcC-CCEEEEccccCCCCChH
Confidence            6899999999999999999999999999998874432222  43322 24442234444446 999999988531     


Q ss_pred             --------hHHHHHhhccCC--CEEEEEcc
Q 017901          250 --------TERLGLNFLKRG--GHYMTLHG  269 (364)
Q Consensus       250 --------~~~~~~~~l~~~--G~~v~~g~  269 (364)
                              .....++.++..  .++|.++.
T Consensus        80 ~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           80 SEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             GGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence                    123444444433  46887775

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.91  E-value=0.025  Score=47.62  Aligned_cols=91  Identities=12%  Similarity=0.156  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~  251 (364)
                      .|.+|||.| +|.+|...++.+...|++|+++......  ..+.+.+.-..+...-.  .+.+.+ +|+||-+++.+ .+
T Consensus        30 ~gk~VLVVG-gG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~--~~dL~~-adLVIaAT~d~-~~  104 (223)
T 3dfz_A           30 KGRSVLVVG-GGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVG--EEDLLN-VFFIVVATNDQ-AV  104 (223)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCC--GGGSSS-CSEEEECCCCT-HH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCC--HhHhCC-CCEEEECCCCH-HH
Confidence            578899999 7999999999999999999988654332  22323332222211100  112335 99999999998 55


Q ss_pred             HHHHhhccCCCEEEEEcc
Q 017901          252 RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~  269 (364)
                      +..+...+..|.+|....
T Consensus       105 N~~I~~~ak~gi~VNvvD  122 (223)
T 3dfz_A          105 NKFVKQHIKNDQLVNMAS  122 (223)
T ss_dssp             HHHHHHHSCTTCEEEC--
T ss_pred             HHHHHHHHhCCCEEEEeC
Confidence            555555455887776654

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.89  E-value=0.1  Score=47.16  Aligned_cols=135  Identities=14%  Similarity=0.088  Sum_probs=82.0

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHc-CCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCch
Q 017901          176 QRLLVLGGGGAVGF-AAVQFSVAS-GCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPE  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~-~~~~~a~~~-g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~  249 (364)
                      -++.|.| .|.+|. ..+..++.. +++++++++.. ++  ..+.+.|+..+     .++.+.+. ..+|+|+.|+....
T Consensus        28 ~rigiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-----~~~~~ll~~~~~D~V~i~tp~~~  101 (350)
T 3rc1_A           28 IRVGVIG-CADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-----EGYPALLERDDVDAVYVPLPAVL  101 (350)
T ss_dssp             EEEEEES-CCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-----ESHHHHHTCTTCSEEEECCCGGG
T ss_pred             eEEEEEc-CcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-----CCHHHHhcCCCCCEEEECCCcHH
Confidence            4689999 899997 566666555 77888885543 33  45667777543     23444443 23999999999986


Q ss_pred             hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCC
Q 017901          250 TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGK  329 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  329 (364)
                      ....+..+++.|-. |.+..+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.
T Consensus       102 h~~~~~~al~aGk~-Vl~EKP~a----------~~~~----ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~  166 (350)
T 3rc1_A          102 HAEWIDRALRAGKH-VLAEKPLT----------TDRP----QAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGV  166 (350)
T ss_dssp             HHHHHHHHHHTTCE-EEEESSSC----------SSHH----HHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHCCCc-EEEeCCCC----------CCHH----HHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCC
Confidence            77777778876655 55654411          0111    111111123344555544443333456788888999887


Q ss_pred             ce
Q 017901          330 LK  331 (364)
Q Consensus       330 i~  331 (364)
                      +-
T Consensus       167 iG  168 (350)
T 3rc1_A          167 IG  168 (350)
T ss_dssp             TC
T ss_pred             CC
Confidence            64

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=95.88  E-value=0.034  Score=50.06  Aligned_cols=101  Identities=23%  Similarity=0.154  Sum_probs=64.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HHHH----HcC-------------CceeeeCCC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DRVL----AAG-------------AEQAVDYSS  227 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~~~----~~g-------------~~~v~~~~~  227 (364)
                      ....+.+|++||-.| +|. |..+..+++..|  .+|+++..++.. +.++    ..+             .-.++..+.
T Consensus        99 ~~l~~~~g~~VLDiG-~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           99 SMMDINPGDTVLEAG-SGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HhcCCCCCCEEEEeC-CCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            456789999999999 555 888889998866  689999776653 3332    211             111222222


Q ss_pred             hhHHHHhc-CCccEEEECCCCc-hhHHHHHhhccCCCEEEEEccC
Q 017901          228 KDIELAIK-GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       228 ~~~~~~i~-g~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+....+. +++|+|+-....+ ..+..+.++|++||+++.....
T Consensus       177 ~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  221 (336)
T 2b25_A          177 SGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVN  221 (336)
T ss_dssp             TCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred             HHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence            21111111 3499988766554 3588999999999999977643

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=95.88  E-value=0.031  Score=48.10  Aligned_cols=101  Identities=14%  Similarity=0.127  Sum_probs=68.0

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc----eeeeCCChhHHHHhcCCccE
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE----QAVDYSSKDIELAIKGKFDA  240 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~----~v~~~~~~~~~~~i~g~~D~  240 (364)
                      +.....++++.+||-.| +| .|..+..+++..+++|+++..++.. +.+++....    .++..+-.++. .-.+++|+
T Consensus        47 ~~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~  123 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIG-SG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE-FPENNFDL  123 (266)
T ss_dssp             HTTTCCCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC-CCTTCEEE
T ss_pred             HHHhcCCCCCCEEEEEC-CC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC-CCCCcEEE
Confidence            33556788999999999 45 7888999998879999999877664 666655432    12222211110 00134999


Q ss_pred             EEECCCCc--------hhHHHHHhhccCCCEEEEEcc
Q 017901          241 VLDTIGAP--------ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       241 vid~~g~~--------~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+....-.        ..+..+.+.|+|||+++....
T Consensus       124 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          124 IYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            99863321        246888999999999998764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.87  E-value=0.017  Score=51.86  Aligned_cols=37  Identities=22%  Similarity=0.133  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee-CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKS  210 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~-~~~~  210 (364)
                      .++++||+||++++|.++++.+...|++|+.+. ++.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~   82 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA   82 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            468999999999999999999999999999998 7654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=95.86  E-value=0.074  Score=40.60  Aligned_cols=90  Identities=17%  Similarity=0.148  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceee-eCCChhHHHH--hcCCccEEEECCCCch
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAV-DYSSKDIELA--IKGKFDAVLDTIGAPE  249 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~-~~~~~~~~~~--i~g~~D~vid~~g~~~  249 (364)
                      +.+++|.| .|.+|..+++.+...|.+|+++.++++. +.+. +.+...+. +..+.+....  +.+ +|+||.|++...
T Consensus         4 ~m~i~IiG-~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~d~vi~~~~~~~   81 (140)
T 1lss_A            4 GMYIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIED-ADMYIAVTGKEE   81 (140)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTT-CSEEEECCSCHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCccc-CCEEEEeeCCch
Confidence            35799999 6999999999999999999998876654 4343 34654221 3333332222  234 999999999863


Q ss_pred             h---HHHHHhhccCCCEEEEE
Q 017901          250 T---ERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       250 ~---~~~~~~~l~~~G~~v~~  267 (364)
                      .   +....+.+.++ +++..
T Consensus        82 ~~~~~~~~~~~~~~~-~ii~~  101 (140)
T 1lss_A           82 VNLMSSLLAKSYGIN-KTIAR  101 (140)
T ss_dssp             HHHHHHHHHHHTTCC-CEEEE
T ss_pred             HHHHHHHHHHHcCCC-EEEEE
Confidence            2   22333444443 55544

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.84  E-value=0.021  Score=51.30  Aligned_cols=88  Identities=15%  Similarity=0.107  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      .|.++.|.| .|.+|..+++.++.+|.+|++..++. ..+...+.|+..+      ++.+.+.. .|+|+-++....   
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~ell~~-aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV------ACSELFAS-SDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC------CHHHHHHH-CSEEEECCCCSTTTT
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC------CHHHHHhh-CCEEEEcCCCCHHHH
Confidence            478999999 99999999999999999999997765 4455666675321      23333334 899999987431   


Q ss_pred             -hH-HHHHhhccCCCEEEEEcc
Q 017901          250 -TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~  269 (364)
                       .+ ...+..|++++.+|.++-
T Consensus       216 ~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEECSC
T ss_pred             HHhCHHHHhhCCCCcEEEECCC
Confidence             12 467888999999998873

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.84  E-value=0.032  Score=45.16  Aligned_cols=99  Identities=18%  Similarity=0.149  Sum_probs=64.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCceeeeCCChhHHHHhc--CCccE
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQAVDYSSKDIELAIK--GKFDA  240 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~v~~~~~~~~~~~i~--g~~D~  240 (364)
                      ....+.++++||-.| +|. |..+..+++.. .+|+++..++.. +.+    ...+...-+.....++.+.+.  +++|+
T Consensus        27 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~  103 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVG-CGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDI  103 (192)
T ss_dssp             HHHCCCTTCEEEEES-CTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEE
T ss_pred             HhcCCCCCCEEEEEC-CCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCE
Confidence            556788999999999 555 88888888776 899999776653 333    334441111111122222222  34999


Q ss_pred             EEECCCC---chhHHHHHhhccCCCEEEEEcc
Q 017901          241 VLDTIGA---PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       241 vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+.....   ...+..+.+.|+++|+++....
T Consensus       104 v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~  135 (192)
T 1l3i_A          104 AVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (192)
T ss_dssp             EEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence            9976542   2467888899999999987754

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.83  E-value=0.028  Score=48.88  Aligned_cols=75  Identities=25%  Similarity=0.463  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH-H----HHHHcCCce-e--eeCCChh-H---HHHhc---C
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI-D----RVLAAGAEQ-A--VDYSSKD-I---ELAIK---G  236 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~-~----~~~~~g~~~-v--~~~~~~~-~---~~~i~---g  236 (364)
                      ..+++++|+||+|++|..+++.+...|++|+.+ .++.+. +    .+.+.+... .  .|..+.+ +   .+.+.   |
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999877 444432 2    233334322 2  2333332 2   22222   4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus       104 ~id~li~nAg~  114 (272)
T 4e3z_A          104 RLDGLVNNAGI  114 (272)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            59999999884

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.83  E-value=0.025  Score=48.15  Aligned_cols=73  Identities=21%  Similarity=0.282  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-------eEEEeeCCccH-H-HHHH---cCCc-ee--eeCCChh-HH---HHhc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGC-------HVSATCGSKSI-D-RVLA---AGAE-QA--VDYSSKD-IE---LAIK  235 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~-------~vi~~~~~~~~-~-~~~~---~g~~-~v--~~~~~~~-~~---~~i~  235 (364)
                      +++++|+||+|++|..+++.+...|+       +|+++.++.+. + ...+   .+.. ..  .|..+.+ +.   +.+.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999998888899       89998887543 2 2222   2322 12  2434432 22   2221


Q ss_pred             ---CCccEEEECCCC
Q 017901          236 ---GKFDAVLDTIGA  247 (364)
Q Consensus       236 ---g~~D~vid~~g~  247 (364)
                         |++|++|.+.|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence               459999999884

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=95.83  E-value=0.1  Score=47.31  Aligned_cols=135  Identities=19%  Similarity=0.185  Sum_probs=81.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCcc-H-HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhH
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-I-DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETE  251 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~-~-~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~  251 (364)
                      -++.|.| .|.+|...+..++.. +++++++++... + +.+.+.|+. +  +  .++.+.+. ..+|+|+.|+......
T Consensus         6 ~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~-~--~--~~~~~ll~~~~~D~V~i~tp~~~h~   79 (359)
T 3e18_A            6 YQLVIVG-YGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLK-I--Y--ESYEAVLADEKVDAVLIATPNDSHK   79 (359)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCC-B--C--SCHHHHHHCTTCCEEEECSCGGGHH
T ss_pred             CcEEEEC-cCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCc-e--e--CCHHHHhcCCCCCEEEEcCCcHHHH
Confidence            3689999 899999888877766 678988865433 3 445566653 2  2  23334443 2399999999998677


Q ss_pred             HHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          252 RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      ..+..+++.|-. |++..+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.|-
T Consensus        80 ~~~~~al~aGkh-Vl~EKP~a----------~~~~----ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG  144 (359)
T 3e18_A           80 ELAISALEAGKH-VVCEKPVT----------MTSE----DLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIG  144 (359)
T ss_dssp             HHHHHHHHTTCE-EEEESSCC----------SSHH----HHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTTS
T ss_pred             HHHHHHHHCCCC-EEeeCCCc----------CCHH----HHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCCC
Confidence            788888887644 55654411          0011    11111112233455554444333345678888899888764

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=95.82  E-value=0.045  Score=46.01  Aligned_cols=99  Identities=20%  Similarity=0.183  Sum_probs=64.8

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HH----HHHcCCc---eeeeCCChhHHHHhc---
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DR----VLAAGAE---QAVDYSSKDIELAIK---  235 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~----~~~~g~~---~v~~~~~~~~~~~i~---  235 (364)
                      .....++++||-.| +| .|..+..+++..  +.+|+++..+++. +.    +...|..   .++..+..+....+.   
T Consensus        64 l~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~  141 (229)
T 2avd_A           64 LARLIQAKKALDLG-TF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG  141 (229)
T ss_dssp             HHHHTTCCEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred             HHHhcCCCEEEEEc-CC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC
Confidence            34557788999998 45 789999999876  5699999776653 33    3444542   233332223322221   


Q ss_pred             --CCccEEEECCCCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          236 --GKFDAVLDTIGAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       236 --g~~D~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                        +++|+|+-.....   ..+..+.++|++||.++....
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence              3499987654432   367889999999999988653

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=95.82  E-value=0.021  Score=51.91  Aligned_cols=74  Identities=22%  Similarity=0.198  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH--cCCeEEEeeCCccH--------------HHHHHcCCce-eeeCCChhHHHHh-c
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVA--SGCHVSATCGSKSI--------------DRVLAAGAEQ-AVDYSSKDIELAI-K  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~--~g~~vi~~~~~~~~--------------~~~~~~g~~~-v~~~~~~~~~~~i-~  235 (364)
                      .+.+|||+||+|.+|..+++.+..  .|.+|+++.+....              ......+... ..|..+.+....+ .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   88 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK   88 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence            467999999999999999999988  89999999875431              1111112221 2344444444444 3


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      .++|+||.+.|.
T Consensus        89 ~~~D~vih~A~~  100 (362)
T 3sxp_A           89 LHFDYLFHQAAV  100 (362)
T ss_dssp             SCCSEEEECCCC
T ss_pred             cCCCEEEECCcc
Confidence            339999999984

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.80  E-value=0.045  Score=47.67  Aligned_cols=89  Identities=15%  Similarity=0.062  Sum_probs=61.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChhHHHHhcCCccEEEECCCCc----h
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAP----E  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~~~~~i~g~~D~vid~~g~~----~  249 (364)
                      .+|+|+|+ |.+|..+++.+...|.+|+++.++... ..+...+...+ .|..+  +.  +.+ +|+||.+.+..    .
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d--~~--~~~-~d~vi~~a~~~~~~~~   79 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEE--PS--LDG-VTHLLISTAPDSGGDP   79 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSC--CC--CTT-CCEEEECCCCBTTBCH
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccc--cc--cCC-CCEEEECCCccccccH
Confidence            57999997 999999999999999999999987765 44555555432 22222  22  445 99999999753    1


Q ss_pred             hHHHHHhhccC----CCEEEEEccC
Q 017901          250 TERLGLNFLKR----GGHYMTLHGE  270 (364)
Q Consensus       250 ~~~~~~~~l~~----~G~~v~~g~~  270 (364)
                      .....++.++.    -.++|.++..
T Consensus        80 ~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           80 VLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             HHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             HHHHHHHHHHhhcCCceEEEEeecc
Confidence            23444555443    2688887653

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.79  E-value=0.1  Score=47.78  Aligned_cols=137  Identities=17%  Similarity=0.084  Sum_probs=83.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH--------cCCeEEEeeCCcc--H-HHHHHcCCceeeeCCChhHHHHhc-CCccEEEE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVA--------SGCHVSATCGSKS--I-DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLD  243 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~--------~g~~vi~~~~~~~--~-~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid  243 (364)
                      =+|.|.| +|.+|...+...+.        -+++++++++...  . +.+.++|...++.    ++.+.+. ..+|+|+-
T Consensus        26 irvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~----d~~ell~~~~iDaV~I  100 (393)
T 4fb5_A           26 LGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA----DWRALIADPEVDVVSV  100 (393)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES----CHHHHHHCTTCCEEEE
T ss_pred             ccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC----CHHHHhcCCCCcEEEE
Confidence            3789999 89999865554432        2578999976432  2 5678888875542    2333443 23999999


Q ss_pred             CCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHH
Q 017901          244 TIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR  323 (364)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (364)
                      |+........+..+|+. |+=|++-.+..          .+.    .....-......+++.+.-.+..+....+..+.+
T Consensus       101 atP~~~H~~~a~~al~a-GkhVl~EKPla----------~~~----~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~  165 (393)
T 4fb5_A          101 TTPNQFHAEMAIAALEA-GKHVWCEKPMA----------PAY----ADAERMLATAERSGKVAALGYNYIQNPVMRHIRK  165 (393)
T ss_dssp             CSCGGGHHHHHHHHHHT-TCEEEECSCSC----------SSH----HHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHhc-CCeEEEccCCc----------ccH----HHHHHhhhhHHhcCCccccccccccChHHHHHHH
Confidence            99998677788888876 45567776511          111    1111111123344555544443334457888899


Q ss_pred             HHHcCCcee
Q 017901          324 LSETGKLKI  332 (364)
Q Consensus       324 ~~~~g~i~~  332 (364)
                      ++++|.+-.
T Consensus       166 ~i~~G~iG~  174 (393)
T 4fb5_A          166 LVGDGVIGR  174 (393)
T ss_dssp             HHHTTTTCS
T ss_pred             HHHcCCCcc
Confidence            999987653

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=95.79  E-value=0.025  Score=48.55  Aligned_cols=99  Identities=14%  Similarity=0.187  Sum_probs=64.1

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HH----HHHcCCce---eeeCCChhHHHHhc--C
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DR----VLAAGAEQ---AVDYSSKDIELAIK--G  236 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~----~~~~g~~~---v~~~~~~~~~~~i~--g  236 (364)
                      .....++.+||-.| +| .|..+..+++..  +.+|+++..++.. +.    +.+.|...   ++..+..+......  +
T Consensus        58 l~~~~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~  135 (248)
T 3tfw_A           58 LVRLTQAKRILEIG-TL-GGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECP  135 (248)
T ss_dssp             HHHHHTCSEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCC
T ss_pred             HHhhcCCCEEEEec-CC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCC
Confidence            34556789999998 44 488889999887  5699999776653 33    44456542   22222223222222  2


Q ss_pred             CccEEEECCCCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          237 KFDAVLDTIGAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       237 ~~D~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ++|+||-.....   ..+..+.+.|++||.++.-..
T Consensus       136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~  171 (248)
T 3tfw_A          136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV  171 (248)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            599998543332   357888999999999887643

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.78  E-value=0.035  Score=51.28  Aligned_cols=79  Identities=20%  Similarity=0.191  Sum_probs=53.1

Q ss_pred             hccc-CCCCEEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccH-----------------HHHHHcCCce-e--eeCC
Q 017901          169 AARM-SEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI-----------------DRVLAAGAEQ-A--VDYS  226 (364)
Q Consensus       169 ~~~~-~~g~~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~-----------------~~~~~~g~~~-v--~~~~  226 (364)
                      ...+ +.++++||+||++++|++.+..+.. .|++|+.+.++.+.                 +.+++.|... .  .|..
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            3455 4678899999999999999888888 99999988654321                 3345566432 2  2433


Q ss_pred             Chh----HHHHh---c-CCccEEEECCCC
Q 017901          227 SKD----IELAI---K-GKFDAVLDTIGA  247 (364)
Q Consensus       227 ~~~----~~~~i---~-g~~D~vid~~g~  247 (364)
                      +.+    +.+.+   . |++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            332    22222   1 569999999876

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.78  E-value=0.049  Score=47.39  Aligned_cols=91  Identities=15%  Similarity=0.217  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-eeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      .+++++|.| +|++|.++++.+...|++|+.+.++.++  +++.+++.. .+...+..++.+   +.+|++++|+|....
T Consensus       118 ~~k~vlViG-aGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~---~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          118 PGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEG---HEFDLIINATSSGIS  193 (271)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTT---CCCSEEEECCSCGGG
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhcc---CCCCEEEECCCCCCC
Confidence            678999999 4899999999999999999888877654  445555431 111111112211   239999999997622


Q ss_pred             HH----HHHhhccCCCEEEEEcc
Q 017901          251 ER----LGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ~~----~~~~~l~~~G~~v~~g~  269 (364)
                       .    .....++++..++.+..
T Consensus       194 -~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          194 -GDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             -TCCCCCCGGGCCTTCEEEESCC
T ss_pred             -CCCCCCCHHHcCCCCEEEEecc
Confidence             1    11234566666666653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.78  E-value=0.039  Score=47.80  Aligned_cols=74  Identities=18%  Similarity=0.283  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH--H---HHHHcCCc-ee--eeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI--D---RVLAAGAE-QA--VDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~--~---~~~~~g~~-~v--~~~~~~~-~---~~~i~---g~  237 (364)
                      .+++++|+||++++|..+++.+...|++|+.+.+ +...  +   .+.+.+.. .+  .|..+.+ +   .+.+.   |+
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999977654 3322  2   22333332 22  2334332 2   22221   55


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|++|.+.|.
T Consensus       105 id~li~nAg~  114 (267)
T 4iiu_A          105 WYGVVSNAGI  114 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             ccEEEECCCC
Confidence            9999999884

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.77  E-value=0.12  Score=46.26  Aligned_cols=133  Identities=14%  Similarity=0.119  Sum_probs=81.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETE  251 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~  251 (364)
                      +|.|.| .|.+|...+..++.. +++++++++.. +.  ..+.+.|+.    +.  ++.+.+. ..+|+|+.|+......
T Consensus         5 ~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~--~~~~~l~~~~~D~V~i~tp~~~h~   77 (331)
T 4hkt_A            5 RFGLLG-AGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VR--TIDAIEAAADIDAVVICTPTDTHA   77 (331)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----EC--CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cC--CHHHHhcCCCCCEEEEeCCchhHH
Confidence            688999 799999888777765 77888876543 32  445667764    22  2333443 1399999999988677


Q ss_pred             HHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          252 RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      ..+..+++.|-. |.+..+..          ....    ....-.......++.+.-.+..+....+..+.+++++|.+-
T Consensus        78 ~~~~~al~~gk~-v~~EKP~~----------~~~~----~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           78 DLIERFARAGKA-IFCEKPID----------LDAE----RVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             HHHHHHHHTTCE-EEECSCSC----------SSHH----HHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHcCCc-EEEecCCC----------CCHH----HHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCC
Confidence            777888877644 55554310          0111    11111112334455554444333445788889999998764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.75  E-value=0.023  Score=51.17  Aligned_cols=69  Identities=28%  Similarity=0.226  Sum_probs=48.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      .++.+|||+||+|.+|..+++.+...|.+|+++.++...     .+... ..|..+. .+.+.+.+ +|+||.+.+.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~-~d~vih~A~~   87 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMG-VSAVLHLGAF   87 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTT-CSEEEECCCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhC-CCEEEECCcc
Confidence            456789999999999999999999999999999887654     23332 2344443 34444556 9999999874

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.73  E-value=0.028  Score=49.16  Aligned_cols=61  Identities=13%  Similarity=0.181  Sum_probs=44.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhc--CCccEEEECCCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIK--GKFDAVLDTIGA  247 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~--g~~D~vid~~g~  247 (364)
                      ++..+|||+||+|.+|..+++.+...|.+|+++.++.             .|..+. ++.+.+.  + +|+||.+.|.
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~Dl~d~~~~~~~~~~~~-~d~vih~A~~   73 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------LDITNVLAVNKFFNEKK-PNVVINCAAH   73 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------CCTTCHHHHHHHHHHHC-CSEEEECCCC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-------------CCCCCHHHHHHHHHhcC-CCEEEECCcc
Confidence            4678899999999999999999988999999998752             122222 2333333  4 8999998875

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.73  E-value=0.079  Score=46.42  Aligned_cols=87  Identities=21%  Similarity=0.273  Sum_probs=62.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHH
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG  254 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~  254 (364)
                      .+|.|.| .|.+|...++.+...|.+|++..+++++ +.+.+.|....     .+..+.+.+ .|+||.|+..+..+...
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~~-aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-----ATPCEVVES-CPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHHH-CSEEEECCSSHHHHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHhc-CCEEEEEcCCHHHHHHH
Confidence            4788999 8999999999999999999988877665 66666665321     123333334 89999999965344444


Q ss_pred             H-------hhccCCCEEEEEcc
Q 017901          255 L-------NFLKRGGHYMTLHG  269 (364)
Q Consensus       255 ~-------~~l~~~G~~v~~g~  269 (364)
                      +       ..++++..++.++.
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECSC
T ss_pred             HcCcchHhhcCCCCCEEEeCCC
Confidence            3       56778878877754

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.72  E-value=0.027  Score=50.97  Aligned_cols=90  Identities=18%  Similarity=0.131  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~-~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      -.|.++.|.| .|.+|...++.++ .+|.+|++..++.. .+.+.+.|+..+     .++.+.+.. .|+|+.++.....
T Consensus       161 l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~-aDvVil~vp~~~~  233 (348)
T 2w2k_A          161 PRGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV-----DSLEELARR-SDCVSVSVPYMKL  233 (348)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHHHH-CSEEEECCCCSGG
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe-----CCHHHHhcc-CCEEEEeCCCChH
Confidence            4578999999 8999999999999 99999999877654 344556675422     123333334 8999999886421


Q ss_pred             ----H-HHHHhhccCCCEEEEEcc
Q 017901          251 ----E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ----~-~~~~~~l~~~G~~v~~g~  269 (364)
                          + ...+..++++..++.++.
T Consensus       234 t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          234 THHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             GTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHHHhhHHHHhcCCCCCEEEECCC
Confidence                2 346678899988887764

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.71  E-value=0.087  Score=47.54  Aligned_cols=135  Identities=13%  Similarity=0.110  Sum_probs=83.5

Q ss_pred             EEEEEcCCchHHHH-HHHHHHH-cCCeEEEeeCCcc-H--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchh
Q 017901          177 RLLVLGGGGAVGFA-AVQFSVA-SGCHVSATCGSKS-I--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPET  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~-~~~~a~~-~g~~vi~~~~~~~-~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~  250 (364)
                      ++.|.| +|.+|.. .+...+. -+++++++++... +  +.++++|...+++    ++.+.+. ..+|+|+-|+.....
T Consensus        25 rigiIG-~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~----d~~ell~~~~iDaV~I~tP~~~H   99 (350)
T 4had_A           25 RFGIIS-TAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG----SYEEMLASDVIDAVYIPLPTSQH   99 (350)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES----SHHHHHHCSSCSEEEECSCGGGH
T ss_pred             EEEEEc-ChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC----CHHHHhcCCCCCEEEEeCCCchh
Confidence            689999 8999975 3444444 4789999976543 2  5678888876543    2344443 239999999999867


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCc
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKL  330 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  330 (364)
                      ...+..+|+.| +=|++-.+..          .+.. ....+   ......+++.+.-.+..+....+..+.+++++|.|
T Consensus       100 ~~~~~~al~aG-khVl~EKPla----------~~~~-ea~~l---~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A          100 IEWSIKAADAG-KHVVCEKPLA----------LKAG-DIDAV---IAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             HHHHHHHHHTT-CEEEECSCCC----------SSGG-GGHHH---HHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHhcC-CEEEEeCCcc----------cchh-hHHHH---HHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCC
Confidence            77888888765 5667776521          0111 00011   11223345555444433344578888899999876


Q ss_pred             e
Q 017901          331 K  331 (364)
Q Consensus       331 ~  331 (364)
                      -
T Consensus       165 G  165 (350)
T 4had_A          165 G  165 (350)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.71  E-value=0.048  Score=48.99  Aligned_cols=87  Identities=14%  Similarity=0.070  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|.++.|.| .|.+|...++.++.+|++|++..++.+.. +.+. +. ..    .++.+.+.. .|+|+.++.....   
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~-~~----~~l~ell~~-aDvV~l~~p~~~~t~~  215 (333)
T 1j4a_A          145 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPE-LEKK-GY-YV----DSLDDLYKQ-ADVISLHVPDVPANVH  215 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHT-TC-BC----SCHHHHHHH-CSEEEECSCCCGGGTT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchh-HHhh-Ce-ec----CCHHHHHhh-CCEEEEcCCCcHHHHH
Confidence            468999999 89999999999999999999987766544 3332 32 11    123333334 8999999986422   


Q ss_pred             -H-HHHHhhccCCCEEEEEcc
Q 017901          251 -E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~  269 (364)
                       + ...+..+++++.+|.++.
T Consensus       216 li~~~~l~~mk~ga~lIn~ar  236 (333)
T 1j4a_A          216 MINDESIAKMKQDVVIVNVSR  236 (333)
T ss_dssp             CBSHHHHHHSCTTEEEEECSC
T ss_pred             HHhHHHHhhCCCCcEEEECCC
Confidence             2 356788999999998874

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.71  E-value=0.04  Score=46.26  Aligned_cols=96  Identities=23%  Similarity=0.268  Sum_probs=63.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HHH----HHcCC-----c--eeeeCCChhHHHHhcC
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DRV----LAAGA-----E--QAVDYSSKDIELAIKG  236 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~~----~~~g~-----~--~v~~~~~~~~~~~i~g  236 (364)
                      .++++++||-.| +| .|..+..+++..|  .+|+++..++.. +.+    ...+.     +  .++..+....... .+
T Consensus        74 ~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~  150 (226)
T 1i1n_A           74 QLHEGAKALDVG-SG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE-EA  150 (226)
T ss_dssp             TSCTTCEEEEET-CT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG-GC
T ss_pred             hCCCCCEEEEEc-CC-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc-CC
Confidence            378899999998 45 3888888998876  589999776653 333    33321     1  1222221111011 13


Q ss_pred             CccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ++|+|+....-...+..+.+.|++||+++..-.
T Consensus       151 ~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          151 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            499998877665577899999999999987643

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.70  E-value=0.031  Score=48.47  Aligned_cols=75  Identities=23%  Similarity=0.311  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH--HH---HHHcCCc-ee--eeCCChh----HHHHhc---C
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI--DR---VLAAGAE-QA--VDYSSKD----IELAIK---G  236 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~--~~---~~~~g~~-~v--~~~~~~~----~~~~i~---g  236 (364)
                      ..+++++|+||++++|..+++.+...|++|+.+.+ +.+.  ..   ....+.. .+  .|..+.+    +.+.+.   |
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35688999999999999999999999999999874 3332  11   2222322 12  2444432    222222   5


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|++|.+.|.
T Consensus       103 ~id~li~nAg~  113 (269)
T 3gk3_A          103 KVDVLINNAGI  113 (269)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            59999999884

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.67  E-value=0.031  Score=48.31  Aligned_cols=75  Identities=15%  Similarity=0.283  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CeEEEeeCCccH-HHHHH---cCCc-ee--eeCCCh-hHH---HHhc---
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASG---CHVSATCGSKSI-DRVLA---AGAE-QA--VDYSSK-DIE---LAIK---  235 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g---~~vi~~~~~~~~-~~~~~---~g~~-~v--~~~~~~-~~~---~~i~---  235 (364)
                      -.+++++|+||+|.+|..+++.+...|   ++|+++.++... +.+.+   .+.. .+  .|..+. ++.   +.+.   
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            356789999999999999999999999   899999887542 22222   2322 12  233333 222   2221   


Q ss_pred             C--CccEEEECCCC
Q 017901          236 G--KFDAVLDTIGA  247 (364)
Q Consensus       236 g--~~D~vid~~g~  247 (364)
                      |  ++|++|.+.|.
T Consensus        99 g~~~id~li~~Ag~  112 (267)
T 1sny_A           99 KDQGLNVLFNNAGI  112 (267)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             CCCCccEEEECCCc
Confidence            3  59999999984

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=95.67  E-value=0.03  Score=48.40  Aligned_cols=74  Identities=23%  Similarity=0.375  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH---HHH----HHcCCce---eeeCCChh----HHHHhc--
Q 017901          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI---DRV----LAAGAEQ---AVDYSSKD----IELAIK--  235 (364)
Q Consensus       174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~----~~~g~~~---v~~~~~~~----~~~~i~--  235 (364)
                      .+++++|+||+  +++|..+++.+...|++|+.+.++...   +.+    ...+...   ..|..+.+    +.+.+.  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999998  899999999999999999998765431   222    2334321   12333332    222222  


Q ss_pred             -CCccEEEECCCC
Q 017901          236 -GKFDAVLDTIGA  247 (364)
Q Consensus       236 -g~~D~vid~~g~  247 (364)
                       |++|++|.+.|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             569999999884

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.65  E-value=0.032  Score=49.19  Aligned_cols=90  Identities=19%  Similarity=0.277  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc------H-HHH---HHcCCcee-eeCCCh-hHHHHhcCCccEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS------I-DRV---LAAGAEQA-VDYSSK-DIELAIKGKFDAVL  242 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~------~-~~~---~~~g~~~v-~~~~~~-~~~~~i~g~~D~vi  242 (364)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++..      + ..+   ...|+..+ .|..+. ++...+.+ +|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~-~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN-VDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT-CSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC-CCEEE
Confidence            457999999999999999999999999999988632      1 112   23454422 344443 45555557 99999


Q ss_pred             ECCCCch--hHHHHHhhccCC---CEEE
Q 017901          243 DTIGAPE--TERLGLNFLKRG---GHYM  265 (364)
Q Consensus       243 d~~g~~~--~~~~~~~~l~~~---G~~v  265 (364)
                      .+.+...  .....++.++..   +++|
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           83 STVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             ECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            9998641  223444444332   4676

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.65  E-value=0.023  Score=55.65  Aligned_cols=74  Identities=27%  Similarity=0.421  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC---------Ccc-H----HHHHHcCCceeeeCCCh-hHHHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG---------SKS-I----DRVLAAGAEQAVDYSSK-DIELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~---------~~~-~----~~~~~~g~~~v~~~~~~-~~~~~i~---  235 (364)
                      .|+++||+||++++|.++++.+...|++|+++.+         +.+ .    +.+.+.+...+.|..+. +....+.   
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999865         222 1    23445555555565543 2222222   


Q ss_pred             ---CCccEEEECCCC
Q 017901          236 ---GKFDAVLDTIGA  247 (364)
Q Consensus       236 ---g~~D~vid~~g~  247 (364)
                         |++|++|++.|.
T Consensus        98 ~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           98 KAFGRVDILVNNAGI  112 (613)
T ss_dssp             -------CEECCCCC
T ss_pred             HHCCCCcEEEECCCC
Confidence               569999999984

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.64  E-value=0.043  Score=49.44  Aligned_cols=91  Identities=19%  Similarity=0.203  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc----cH-H---HHHHcCCcee-eeCCCh-hHHHHhc--CCccEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----SI-D---RVLAAGAEQA-VDYSSK-DIELAIK--GKFDAVL  242 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~----~~-~---~~~~~g~~~v-~~~~~~-~~~~~i~--g~~D~vi  242 (364)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.    .+ .   .+...++..+ .|..+. ++...+.  + +|+||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~-~d~Vi   88 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHE-IDIVV   88 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTT-CCEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCC-CCEEE
Confidence            35799999999999999999999999999998866    12 2   2234455432 244443 4555555  6 99999


Q ss_pred             ECCCCc--hhHHHHHhhccCCC---EEEE
Q 017901          243 DTIGAP--ETERLGLNFLKRGG---HYMT  266 (364)
Q Consensus       243 d~~g~~--~~~~~~~~~l~~~G---~~v~  266 (364)
                      .+.+..  ......++.++..|   +++.
T Consensus        89 ~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           89 STVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             ECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             ECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            999964  23345556555544   5653

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.64  E-value=0.098  Score=46.57  Aligned_cols=90  Identities=13%  Similarity=0.019  Sum_probs=64.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHHcCCceeeeCCChhHHH-HhcCCccEEEECCCCch--
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIEL-AIKGKFDAVLDTIGAPE--  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~-~i~g~~D~vid~~g~~~--  249 (364)
                      .+|.|.| .|.+|...++.++..|.  +|++..++++. +.+.+.|.......   +..+ .+.+ +|+||.|+....  
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~---~~~~~~~~~-aDvVilavp~~~~~  108 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT---SIAKVEDFS-PDFVMLSSPVRTFR  108 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES---CTTGGGGGC-CSEEEECSCGGGHH
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcC---CHHHHhhcc-CCEEEEeCCHHHHH
Confidence            6899999 89999999999999998  89988877654 66778886321111   1222 3445 999999999762  


Q ss_pred             -hHHHHHhhccCCCEEEEEccC
Q 017901          250 -TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 -~~~~~~~~l~~~G~~v~~g~~  270 (364)
                       .+......++++..++.++..
T Consensus       109 ~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          109 EIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             HHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHhhccCCCcEEEECCCC
Confidence             334555667888888877643

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.64  E-value=0.033  Score=47.32  Aligned_cols=73  Identities=25%  Similarity=0.386  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH-H----HHHHcCCce---eeeCCChh-HHHHhc------CCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI-D----RVLAAGAEQ---AVDYSSKD-IELAIK------GKF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~-~----~~~~~g~~~---v~~~~~~~-~~~~i~------g~~  238 (364)
                      |++++|+||+|.+|..+++.+...|++|+++ .++... +    .+++.+...   ..|..+.+ +...+.      |++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999985 565432 2    223334321   12444432 222221      459


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |++|.+.|.
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=95.63  E-value=0.2  Score=45.53  Aligned_cols=137  Identities=14%  Similarity=0.036  Sum_probs=81.0

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHc-CCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHH
Q 017901          176 QRLLVLGGGGAVGFA-AVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETER  252 (364)
Q Consensus       176 ~~vli~g~~g~~G~~-~~~~a~~~-g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~  252 (364)
                      -+|.|.| .|.+|.. ....++.. +++++++++........+.+...++    .++.+.+. ..+|+|+.|+.......
T Consensus         8 ~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~~ll~~~~~D~V~i~tp~~~H~~   82 (364)
T 3e82_A            8 INIALIG-YGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVI----ASPEAAVQHPDVDLVVIASPNATHAP   82 (364)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEE----SCHHHHHTCTTCSEEEECSCGGGHHH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEE----CCHHHHhcCCCCCEEEEeCChHHHHH
Confidence            3689999 7999985 66666555 7799988765544333444333332    13444444 23999999999886777


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~  332 (364)
                      .+..+++.| +-|.+..+..          ....    ....-......+++.+.-.+..+....+..+.+++.+|.|-.
T Consensus        83 ~~~~al~aG-k~Vl~EKPla----------~~~~----e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~  147 (364)
T 3e82_A           83 LARLALNAG-KHVVVDKPFT----------LDMQ----EARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGA  147 (364)
T ss_dssp             HHHHHHHTT-CEEEECSCSC----------SSHH----HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHTTTCS
T ss_pred             HHHHHHHCC-CcEEEeCCCc----------CCHH----HHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcCCCcc
Confidence            788888776 4456655411          0111    111111122334555544443333456788889999887653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.62  E-value=0.03  Score=50.23  Aligned_cols=71  Identities=24%  Similarity=0.322  Sum_probs=48.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      .+|||+||+|.+|..+++.+...|.+|+++.++... ..+...++..+ .|..+. ++.+.+.+ +|+||.+.+.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~-~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRG-LDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTT-CSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcC-CCEEEECCcc
Confidence            479999999999999999999999999999886543 22222244322 244443 34444556 9999999884

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.61  E-value=0.051  Score=48.65  Aligned_cols=74  Identities=18%  Similarity=0.213  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHH----cC--Cce-eeeCCCh-hHHHHhc-CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLA----AG--AEQ-AVDYSSK-DIELAIK-GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~----~g--~~~-v~~~~~~-~~~~~i~-g~~D~vi  242 (364)
                      .+.+|||+||+|.+|..+++.+...|++|+++.++...  +.+.+    .+  ... ..|..+. ++.+.+. +++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            45789999999999999999999999999999775432  22221    12  221 1233333 3334443 2399999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.|.
T Consensus        84 h~A~~   88 (341)
T 3enk_A           84 HFAAL   88 (341)
T ss_dssp             ECCCC
T ss_pred             ECccc
Confidence            99985

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.60  E-value=0.18  Score=45.58  Aligned_cols=135  Identities=9%  Similarity=0.050  Sum_probs=82.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchh
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPET  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~  250 (364)
                      -+|.|.| .|.+|...+..++.. +++++++++.. ++  ..+.+.|+..   +  .++.+.+. ..+|+|+.|+.....
T Consensus         6 ~~vgiiG-~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~--~~~~~~l~~~~~D~V~i~tp~~~h   79 (354)
T 3db2_A            6 VGVAAIG-LGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D--ATMEALLAREDVEMVIITVPNDKH   79 (354)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C--SSHHHHHHCSSCCEEEECSCTTSH
T ss_pred             ceEEEEc-cCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c--CCHHHHhcCCCCCEEEEeCChHHH
Confidence            4689999 799998888877766 77888886543 33  4456677653   2  23444442 239999999999867


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCc
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKL  330 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  330 (364)
                      ...+..+++.|-. |.+..+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.+
T Consensus        80 ~~~~~~al~~gk~-vl~EKP~~----------~~~~----~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           80 AEVIEQCARSGKH-IYVEKPIS----------VSLD----HAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             HHHHHHHHHTTCE-EEEESSSC----------SSHH----HHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHcCCE-EEEccCCC----------CCHH----HHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCC
Confidence            7777888877655 45544310          0011    1111111223345555444433345678888999999877


Q ss_pred             e
Q 017901          331 K  331 (364)
Q Consensus       331 ~  331 (364)
                      -
T Consensus       145 G  145 (354)
T 3db2_A          145 G  145 (354)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.60  E-value=0.061  Score=48.50  Aligned_cols=88  Identities=15%  Similarity=0.148  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch-h--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE-T--  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~-~--  250 (364)
                      .|+++.|.| .|.+|...++.++.+|.+|++..+......... |+..+     .++.+.+.. .|+|+-++.... +  
T Consensus       172 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-g~~~~-----~~l~ell~~-sDvV~l~~Plt~~T~~  243 (345)
T 4g2n_A          172 TGRRLGIFG-MGRIGRAIATRARGFGLAIHYHNRTRLSHALEE-GAIYH-----DTLDSLLGA-SDIFLIAAPGRPELKG  243 (345)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT-TCEEC-----SSHHHHHHT-CSEEEECSCCCGGGTT
T ss_pred             CCCEEEEEE-eChhHHHHHHHHHHCCCEEEEECCCCcchhhhc-CCeEe-----CCHHHHHhh-CCEEEEecCCCHHHHH
Confidence            368999999 999999999999999999999877643321111 54321     234444445 999999988531 1  


Q ss_pred             -H-HHHHhhccCCCEEEEEcc
Q 017901          251 -E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~  269 (364)
                       + ...+..|+++..+|.++-
T Consensus       244 li~~~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          244 FLDHDRIAKIPEGAVVINISR  264 (345)
T ss_dssp             CBCHHHHHHSCTTEEEEECSC
T ss_pred             HhCHHHHhhCCCCcEEEECCC
Confidence             2 467788999999998873

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.59  E-value=0.041  Score=49.48  Aligned_cols=86  Identities=16%  Similarity=0.161  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch----
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~----  249 (364)
                      .|.++.|.| .|.+|...++.++.+|.+|++..++.+.+.+.+.|+..    .  ++.+.+.. .|+|+.++....    
T Consensus       145 ~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~----~--~l~e~l~~-aDiVil~vp~~~~t~~  216 (333)
T 2d0i_A          145 YGKKVGILG-MGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARY----M--DIDELLEK-SDIVILALPLTRDTYH  216 (333)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEE----C--CHHHHHHH-CSEEEECCCCCTTTTT
T ss_pred             CcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCcee----c--CHHHHHhh-CCEEEEcCCCChHHHH
Confidence            578999999 89999999999999999999988776655555566431    1  23333334 899999988752    


Q ss_pred             hHH-HHHhhccCCCEEEEEc
Q 017901          250 TER-LGLNFLKRGGHYMTLH  268 (364)
Q Consensus       250 ~~~-~~~~~l~~~G~~v~~g  268 (364)
                      .+. ..+..++++ .++.++
T Consensus       217 ~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          217 IINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             SBCHHHHHHTBTC-EEEECS
T ss_pred             HhCHHHHhhCCCC-EEEECC
Confidence            222 456788888 888776

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.58  E-value=0.037  Score=46.59  Aligned_cols=98  Identities=16%  Similarity=0.109  Sum_probs=64.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHc----CCceeeeCCChhHHHHhcCCccEEE
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAA----GAEQAVDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~----g~~~v~~~~~~~~~~~i~g~~D~vi  242 (364)
                      ....+.++++||-.| +|. |..+..+++. +.+|+++..++.. +.+++.    +.-.++..+..+... ..+++|+|+
T Consensus        64 ~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~  139 (231)
T 1vbf_A           64 DELDLHKGQKVLEIG-TGI-GYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVV  139 (231)
T ss_dssp             HHTTCCTTCEEEEEC-CTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEE
T ss_pred             HhcCCCCCCEEEEEc-CCC-CHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEE
Confidence            556788999999999 554 8888888887 4899999777654 444433    211222222221011 113499999


Q ss_pred             ECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          243 DTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ....-......+.+.|++||+++..-.
T Consensus       140 ~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          140 VWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             ESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             ECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            876655455788999999999987754

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.57  E-value=0.13  Score=43.20  Aligned_cols=96  Identities=10%  Similarity=0.119  Sum_probs=62.4

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-H----HHHHcCCc-e---eeeCCChhHHHHh-cCCc
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-D----RVLAAGAE-Q---AVDYSSKDIELAI-KGKF  238 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~----~~~~~g~~-~---v~~~~~~~~~~~i-~g~~  238 (364)
                      ..+++.+||-.|  .+.|..+..+|+..  +.+|+++..+++. +    .+.+.|.. .   ++..+..++.... .+++
T Consensus        53 ~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~f  130 (221)
T 3dr5_A           53 NGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSY  130 (221)
T ss_dssp             CCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCE
T ss_pred             CCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCc
Confidence            334455999888  34799999999986  6799999776653 3    34555654 2   2222222333333 2459


Q ss_pred             cEEEECCCCc---hhHHHHHhhccCCCEEEEEc
Q 017901          239 DAVLDTIGAP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       239 D~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                      |+||-.....   ..+..+.+.|++||.++.-.
T Consensus       131 D~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn  163 (221)
T 3dr5_A          131 QLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD  163 (221)
T ss_dssp             EEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred             CeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence            9998654432   35778899999999998643

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.57  E-value=0.16  Score=45.63  Aligned_cols=135  Identities=16%  Similarity=0.101  Sum_probs=81.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETE  251 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~  251 (364)
                      +|.|.| .|.+|...+..++.. +++++++++.. ++  ..+.+.|...+++    ++.+.+. ..+|+|+.|+......
T Consensus         4 rvgiIG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~----~~~~ll~~~~~D~V~i~tp~~~h~   78 (344)
T 3ezy_A            4 RIGVIG-LGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK----DPHELIEDPNVDAVLVCSSTNTHS   78 (344)
T ss_dssp             EEEEEC-CSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES----SHHHHHHCTTCCEEEECSCGGGHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC----CHHHHhcCCCCCEEEEcCCCcchH
Confidence            688999 799998877766554 67888886543 32  4456777654432    2333333 1399999999988677


Q ss_pred             HHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          252 RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      ..+..+++.|-. |.+..+..          ....    ....-.......++.+.-.+..+....+..+.+++++|.|-
T Consensus        79 ~~~~~al~~gk~-v~~EKP~~----------~~~~----e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           79 ELVIACAKAKKH-VFCEKPLS----------LNLA----DVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             HHHHHHHHTTCE-EEEESCSC----------SCHH----HHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTTS
T ss_pred             HHHHHHHhcCCe-EEEECCCC----------CCHH----HHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCCC
Confidence            777778777655 45554310          0111    11111112233455554444443456788889999988764

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.52  E-value=0.16  Score=45.64  Aligned_cols=135  Identities=13%  Similarity=0.045  Sum_probs=81.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchh
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPET  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~  250 (364)
                      -+|.|.| .|.+|...+..++.. +.+++++++.. ++  ..+.++|+. ++    .++.+.+. ..+|+|+.|+.....
T Consensus         5 ~rvgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~~----~~~~~~l~~~~~D~V~i~tp~~~h   78 (344)
T 3euw_A            5 LRIALFG-AGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-AV----ASPDEVFARDDIDGIVIGSPTSTH   78 (344)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-EE----SSHHHHTTCSCCCEEEECSCGGGH
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-ee----CCHHHHhcCCCCCEEEEeCCchhh
Confidence            3689999 799999888877765 67888876543 33  345666732 32    13444444 239999999999867


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCc
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKL  330 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  330 (364)
                      ...+..+++.|-. |.+..+..          ....    ....-.......++.+.-.+..+....+..+.+++++|.+
T Consensus        79 ~~~~~~al~~gk~-v~~EKP~~----------~~~~----~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           79 VDLITRAVERGIP-ALCEKPID----------LDIE----MVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             HHHHHHHHHTTCC-EEECSCSC----------SCHH----HHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHcCCc-EEEECCCC----------CCHH----HHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCC
Confidence            7777788877655 45544310          0011    1111111223345545444433334578888899999876


Q ss_pred             e
Q 017901          331 K  331 (364)
Q Consensus       331 ~  331 (364)
                      -
T Consensus       144 G  144 (344)
T 3euw_A          144 G  144 (344)
T ss_dssp             S
T ss_pred             C
Confidence            4

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.51  E-value=0.17  Score=46.71  Aligned_cols=136  Identities=14%  Similarity=0.097  Sum_probs=85.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc---------CCeEEEeeCCcc-H--HHHHHcCCceeeeCCChhHHHHhc-CCccEEE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS---------GCHVSATCGSKS-I--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVL  242 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~---------g~~vi~~~~~~~-~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vi  242 (364)
                      =+|.|.| +|.+|...+...+..         +++++++++... +  +.+.++|...++.    ++.+.+. ..+|+|+
T Consensus        27 lrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~----d~~~ll~~~~vD~V~  101 (412)
T 4gqa_A           27 LNIGLIG-SGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG----DWRELVNDPQVDVVD  101 (412)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES----SHHHHHHCTTCCEEE
T ss_pred             ceEEEEc-CcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC----CHHHHhcCCCCCEEE
Confidence            3689999 899998777666543         468999876543 2  5578888866543    2344443 2399999


Q ss_pred             ECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHH
Q 017901          243 DTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIR  322 (364)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (364)
                      -|+........+..+|+.| +=|++-.+..          . ..   .....-......++..+.-.+..+....+..+.
T Consensus       102 I~tp~~~H~~~~~~al~aG-khVl~EKP~a----------~-~~---~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k  166 (412)
T 4gqa_A          102 ITSPNHLHYTMAMAAIAAG-KHVYCEKPLA----------V-NE---QQAQEMAQAARRAGVKTMVAFNNIKTPAALLAK  166 (412)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEEESCSC----------S-SH---HHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHcC-CCeEeecCCc----------C-CH---HHHHHHHHHHHHhCCeeeeccceecCHHHHHHH
Confidence            9999986777888888776 5566765511          0 11   111111112234455554444444456788889


Q ss_pred             HHHHcCCce
Q 017901          323 RLSETGKLK  331 (364)
Q Consensus       323 ~~~~~g~i~  331 (364)
                      +++++|.|-
T Consensus       167 ~~i~~G~iG  175 (412)
T 4gqa_A          167 QIIARGDIG  175 (412)
T ss_dssp             HHHHHTTTC
T ss_pred             HHHhcCCcC
Confidence            999998774

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.50  E-value=0.068  Score=47.04  Aligned_cols=86  Identities=16%  Similarity=0.184  Sum_probs=60.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGL  255 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~  255 (364)
                      +|.|.| .|.+|...+..+...|.+|++..+++++ +.+.+.|...   ..  +..+.+.+ +|+||.|++.+..+...+
T Consensus         7 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~---~~--~~~~~~~~-~D~vi~~v~~~~~~~~~~   79 (299)
T 1vpd_A            7 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET---AS--TAKAIAEQ-CDVIITMLPNSPHVKEVA   79 (299)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE---CS--SHHHHHHH-CSEEEECCSSHHHHHHHH
T ss_pred             eEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee---cC--CHHHHHhC-CCEEEEECCCHHHHHHHH
Confidence            699999 8999999999888889999887776554 5556656431   11  22333334 899999999654444444


Q ss_pred             -------hhccCCCEEEEEcc
Q 017901          256 -------NFLKRGGHYMTLHG  269 (364)
Q Consensus       256 -------~~l~~~G~~v~~g~  269 (364)
                             ..++++..++.++.
T Consensus        80 ~~~~~l~~~l~~~~~vv~~s~  100 (299)
T 1vpd_A           80 LGENGIIEGAKPGTVLIDMSS  100 (299)
T ss_dssp             HSTTCHHHHCCTTCEEEECSC
T ss_pred             hCcchHhhcCCCCCEEEECCC
Confidence                   56778888887754

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.49  E-value=0.052  Score=48.75  Aligned_cols=88  Identities=11%  Similarity=0.054  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      .|.+|.|.| .|.+|...++.++..|.+|++..++.+ .+.+.+.|...+      ++.+.+.. .|+|+.++....   
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l~~-aDvVi~~vp~~~~t~  225 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------STPELAAQ-SDFIVVACSLTPATE  225 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------CHHHHHHH-CSEEEECCCCCTTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------CHHHHHhh-CCEEEEeCCCChHHH
Confidence            467899999 899999999999999999999876554 444555554321      23333334 899999998642   


Q ss_pred             -hH-HHHHhhccCCCEEEEEcc
Q 017901          250 -TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~  269 (364)
                       .+ ...+..++++..++.++.
T Consensus       226 ~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          226 GLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             TCBSHHHHHHSCTTCEEEECSC
T ss_pred             HhhCHHHHhcCCCCcEEEECCC
Confidence             22 356678899998887764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.46  E-value=0.073  Score=47.17  Aligned_cols=73  Identities=18%  Similarity=0.166  Sum_probs=48.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCCh-hHHHHhc-CCccEEEECCCC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIK-GKFDAVLDTIGA  247 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~i~-g~~D~vid~~g~  247 (364)
                      -++..+|||+||+|.+|..+++.+...|.+|+++.++.....   ++... ..|..+. ++.+.+. +++|+||.+.|.
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   84 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK   84 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence            356688999999999999999999999999999987654311   23221 1233333 3333333 238999999885

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.45  E-value=0.041  Score=53.76  Aligned_cols=97  Identities=14%  Similarity=0.267  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc---------c-H----HHHHHcCCceeeeCCCh----hHHHHhc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK---------S-I----DRVLAAGAEQAVDYSSK----DIELAIK  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~---------~-~----~~~~~~g~~~v~~~~~~----~~~~~i~  235 (364)
                      .|++++|+||++++|.+.++.+...|++|+...++.         + .    +.+.+.|...+.|..+.    .+.+.+.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            478899999999999999999999999999875432         2 1    22334454444554443    2333332


Q ss_pred             ---CCccEEEECCCCch----------h---------------HHHHHhhcc--CCCEEEEEccC
Q 017901          236 ---GKFDAVLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       236 ---g~~D~vid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                         |++|+++++.|...          .               .+.++..|+  .+|++|.++..
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~  151 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSP  151 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence               66999999998420          0               245555563  35899998754

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=95.44  E-value=0.043  Score=50.88  Aligned_cols=78  Identities=19%  Similarity=0.229  Sum_probs=50.4

Q ss_pred             cccCCCCEEEEEcCCchHHHH--HHHHHHHcCCeEEEeeCCcc--------------H---HHHHHcCCce-e--eeCCC
Q 017901          170 ARMSEGQRLLVLGGGGAVGFA--AVQFSVASGCHVSATCGSKS--------------I---DRVLAAGAEQ-A--VDYSS  227 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~--~~~~a~~~g~~vi~~~~~~~--------------~---~~~~~~g~~~-v--~~~~~  227 (364)
                      ..+..|+++||+||++++|++  .+......|++|+.+.++..              .   +.+.+.|... .  .|..+
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            445778999999999999998  55555555999998866421              1   2334555432 2  24334


Q ss_pred             hh----HHHHhc---CCccEEEECCCC
Q 017901          228 KD----IELAIK---GKFDAVLDTIGA  247 (364)
Q Consensus       228 ~~----~~~~i~---g~~D~vid~~g~  247 (364)
                      .+    +.+.+.   |++|+++++.|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            32    223332   669999999886

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.44  E-value=0.0053  Score=53.36  Aligned_cols=70  Identities=19%  Similarity=0.177  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      +++|+|+||+|.+|..+++.+...|++|+++.+++....  ..+... ..|..+. ++...+.+ +|++|.+.|.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~-~D~vi~~Ag~   74 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--GPNEECVQCDLADANAVNAMVAG-CDGIVHLGGI   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHHTT-CSEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHHcC-CCEEEECCCC
Confidence            468999999999999999999889999999988765321  111111 2244443 33444445 9999999875

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.42  E-value=0.089  Score=45.76  Aligned_cols=89  Identities=19%  Similarity=0.191  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCC--ceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGA--EQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~--~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+++++|.| +|++|.+++..+...|+ +|+.+.|+.++  +++.+++.  ..+...+  ++..  .+ +|+||+|++..
T Consensus       119 ~~k~~lvlG-aGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~l~~--~~-~DivInaTp~g  192 (272)
T 3pwz_A          119 RNRRVLLLG-AGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE--ALEG--QS-FDIVVNATSAS  192 (272)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--GGTT--CC-CSEEEECSSGG
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--Hhcc--cC-CCEEEECCCCC
Confidence            578999999 68999999999999996 88888887654  44556553  1223222  2211  34 99999998764


Q ss_pred             hh---HHHHHhhccCCCEEEEEc
Q 017901          249 ET---ERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       249 ~~---~~~~~~~l~~~G~~v~~g  268 (364)
                      ..   .......++++..++.+.
T Consensus       193 m~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          193 LTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             GGTCCCCCCGGGGTTCSEEEESS
T ss_pred             CCCCCCCCCHHHhCcCCEEEEee
Confidence            11   011235677877777765

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.42  E-value=0.11  Score=46.04  Aligned_cols=88  Identities=18%  Similarity=0.178  Sum_probs=63.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHH
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL  253 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~  253 (364)
                      -.+|.|.| .|.+|...++.+...|.+|++..+++++ +.+.+.|+...     .+..+.+.+ .|+||-|+..+..+..
T Consensus        21 m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~~~~~~-aDvvi~~vp~~~~~~~   93 (310)
T 3doj_A           21 MMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVC-----ESPAEVIKK-CKYTIAMLSDPCAALS   93 (310)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHHH-CSEEEECCSSHHHHHH
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEc-----CCHHHHHHh-CCEEEEEcCCHHHHHH
Confidence            35799999 8999999999999999999998877665 66667775321     123333334 8999999987544444


Q ss_pred             HH-------hhccCCCEEEEEcc
Q 017901          254 GL-------NFLKRGGHYMTLHG  269 (364)
Q Consensus       254 ~~-------~~l~~~G~~v~~g~  269 (364)
                      .+       ..++++..++.++.
T Consensus        94 v~~~~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           94 VVFDKGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             HHHSTTCGGGGCCTTCEEEECSC
T ss_pred             HHhCchhhhhccCCCCEEEECCC
Confidence            33       45677777777764

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=95.39  E-value=0.058  Score=49.16  Aligned_cols=91  Identities=16%  Similarity=0.093  Sum_probs=62.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCCh-hHHHHhcCCccEEEECCCCchhHHH
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSK-DIELAIKGKFDAVLDTIGAPETERL  253 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~-~~~~~i~g~~D~vid~~g~~~~~~~  253 (364)
                      .+|+|.|+ |.+|..+++.+.. ...|....++.+. +.+.+......+|.++. .+.+.+.+ +|+|++|++.......
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~-~DvVi~~~p~~~~~~v   93 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKE-FELVIGALPGFLGFKS   93 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTT-CSEEEECCCGGGHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhC-CCEEEEecCCcccchH
Confidence            47999995 9999998887754 4677777666554 44444332233455443 45555556 9999999998655666


Q ss_pred             HHhhccCCCEEEEEcc
Q 017901          254 GLNFLKRGGHYMTLHG  269 (364)
Q Consensus       254 ~~~~l~~~G~~v~~g~  269 (364)
                      +-.|++.+-.++....
T Consensus        94 ~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           94 IKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHHTCEEEECCC
T ss_pred             HHHHHhcCcceEeeec
Confidence            7778888888888764

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=95.36  E-value=0.19  Score=45.48  Aligned_cols=137  Identities=14%  Similarity=0.083  Sum_probs=81.3

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHc-CCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHH
Q 017901          176 QRLLVLGGGGAVGFA-AVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETER  252 (364)
Q Consensus       176 ~~vli~g~~g~~G~~-~~~~a~~~-g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~  252 (364)
                      -++.|.| .|.+|.. .+..++.. +++++++++........+.+...++.    ++.+.+. ..+|+|+.|+.......
T Consensus         6 ~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~----~~~~ll~~~~vD~V~i~tp~~~H~~   80 (358)
T 3gdo_A            6 IKVGILG-YGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVH----ELEEITNDPAIELVIVTTPSGLHYE   80 (358)
T ss_dssp             EEEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEES----STHHHHTCTTCCEEEECSCTTTHHH
T ss_pred             ceEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceEC----CHHHHhcCCCCCEEEEcCCcHHHHH
Confidence            3689999 7999975 56655554 77899887765544455554333332    2333443 23999999999886777


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~  332 (364)
                      .+..+++.|-. |.+..+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.+-.
T Consensus        81 ~~~~al~aGkh-Vl~EKPla----------~~~~----e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~  145 (358)
T 3gdo_A           81 HTMACIQAGKH-VVMEKPMT----------ATAE----EGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEGSLED  145 (358)
T ss_dssp             HHHHHHHTTCE-EEEESSCC----------SSHH----HHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTSSCS
T ss_pred             HHHHHHHcCCe-EEEecCCc----------CCHH----HHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHhcCCCCc
Confidence            88888877744 45554411          0011    111111122334555544443333456788899999987643

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=95.35  E-value=0.066  Score=47.61  Aligned_cols=35  Identities=23%  Similarity=0.321  Sum_probs=31.1

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .|++++|+||  ++++|.++++.+...|++|+.+.++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            4789999998  7999999999999999999998754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.34  E-value=0.051  Score=51.22  Aligned_cols=93  Identities=16%  Similarity=0.265  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HH-HHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DR-VLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~-~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+.+|+|.| +|.+|..++..+... |.+|+++.++.++ +. +.+.+... .++..+. ++.+.+.+ +|+||+|++..
T Consensus        22 ~~k~VlIiG-AGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~-~DvVIn~tp~~   99 (467)
T 2axq_A           22 MGKNVLLLG-SGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLAD-NDVVISLIPYT   99 (467)
T ss_dssp             -CEEEEEEC-CSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHT-SSEEEECSCGG
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcC-CCEEEECCchh
Confidence            356899999 599999999888877 6788888887654 33 32334322 2344333 44455556 99999999975


Q ss_pred             hhHHHHHhhccCCCEEEEEc
Q 017901          249 ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g  268 (364)
                      ........+++.+-.++...
T Consensus       100 ~~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A          100 FHPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             GHHHHHHHHHHHTCEEEECS
T ss_pred             hhHHHHHHHHhcCCEEEEee
Confidence            22233445666776776653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.32  E-value=0.036  Score=48.93  Aligned_cols=72  Identities=17%  Similarity=0.114  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccHHHHHHcCCce-eeeCCCh-hHHHHhc--CCccEEEECCCCc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIK--GKFDAVLDTIGAP  248 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~i~--g~~D~vid~~g~~  248 (364)
                      +.+|+|+||+|.+|..+++.+...  |.+|+++.++.....+.. +... ..|..+. ++.+.+.  + +|+||.+.+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~-~d~vih~a~~~   79 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN-SGPFEVVNALDFNQIEHLVEVHK-ITDIYLMAALL   79 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH-SSCEEECCTTCHHHHHHHHHHTT-CCEEEECCCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC-CCceEEecCCCHHHHHHHHhhcC-CCEEEECCccC
Confidence            367999999999999999888877  889999987654322211 2322 2244443 3444444  5 99999999863

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.32  E-value=0.18  Score=45.09  Aligned_cols=136  Identities=10%  Similarity=-0.062  Sum_probs=82.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchh
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPET  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~  250 (364)
                      -++.|.| .|.+|...+..++.. +++++++++.. ++  ..+.+.|...++.    ++.+.+. ..+|+|+.|+.....
T Consensus         6 ~~igiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~----~~~~ll~~~~~D~V~i~tp~~~h   80 (330)
T 3e9m_A            6 IRYGIMS-TAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYG----SYEELCKDETIDIIYIPTYNQGH   80 (330)
T ss_dssp             EEEEECS-CCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBS----SHHHHHHCTTCSEEEECCCGGGH
T ss_pred             EEEEEEC-chHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeC----CHHHHhcCCCCCEEEEcCCCHHH
Confidence            3688999 799998888877775 67888885543 33  4456777643331    3333443 239999999999867


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCc
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKL  330 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  330 (364)
                      ...+..+++.|-. |.+..+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.+
T Consensus        81 ~~~~~~al~~gk~-vl~EKP~~----------~~~~----e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           81 YSAAKLALSQGKP-VLLEKPFT----------LNAA----EAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGL  145 (330)
T ss_dssp             HHHHHHHHHTTCC-EEECSSCC----------SSHH----HHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHCCCe-EEEeCCCC----------CCHH----HHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCC
Confidence            7777888877654 45544310          0011    1111111223345555444433344578888899998876


Q ss_pred             e
Q 017901          331 K  331 (364)
Q Consensus       331 ~  331 (364)
                      -
T Consensus       146 G  146 (330)
T 3e9m_A          146 G  146 (330)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.31  E-value=0.072  Score=52.03  Aligned_cols=97  Identities=20%  Similarity=0.309  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCceeeeCCCh-----hHHHHhc---CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQAVDYSSK-----DIELAIK---GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~v~~~~~~-----~~~~~i~---g~~D~vi  242 (364)
                      .|++++|+||++++|.+.++.+...|++|+...+....   +.+.+.|...+....+-     .+.+.+.   |++|+++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            46789999999999999999999999999987643322   33445554333222221     1222222   6699999


Q ss_pred             ECCCCch----------h---------------HHHHHhhcc--CCCEEEEEccC
Q 017901          243 DTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       243 d~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      ++.|...          .               .+.++..++  .+|++|.++..
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~  455 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITST  455 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            9988420          0               245555563  45899998754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.31  E-value=0.032  Score=49.95  Aligned_cols=73  Identities=16%  Similarity=0.202  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHc-CCce-eeeCCCh-hHHHHhc--CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAA-GAEQ-AVDYSSK-DIELAIK--GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~-g~~~-v~~~~~~-~~~~~i~--g~~D~vid~~g  246 (364)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.++... . .+.++ ++.. ..|..+. ++...+.  + +|+||.+.|
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~-~D~vih~A~   97 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFK-PTHVVHSAA   97 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHC-CSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcC-CCEEEECCc
Confidence            46789999999999999999998899999999875332 1 11111 1111 1233343 3444444  6 999999988


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        98 ~   98 (330)
T 2pzm_A           98 A   98 (330)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=95.30  E-value=0.24  Score=44.30  Aligned_cols=135  Identities=13%  Similarity=0.026  Sum_probs=81.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCch
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG---CHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPE  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g---~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~  249 (364)
                      ++.|.| +|.+|...+..++..+   ++++++++.. ++  +.+.+.|...++.    ++.+.+. ..+|+|+.|+....
T Consensus         4 rigiiG-~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~----~~~~ll~~~~vD~V~i~tp~~~   78 (334)
T 3ohs_X            4 RWGIVS-VGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYG----SYEELAKDPNVEVAYVGTQHPQ   78 (334)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEES----SHHHHHHCTTCCEEEECCCGGG
T ss_pred             EEEEEC-chHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccC----CHHHHhcCCCCCEEEECCCcHH
Confidence            688999 8999988777776553   4788886543 32  4567778754432    2333333 23999999999886


Q ss_pred             hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCC
Q 017901          250 TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGK  329 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  329 (364)
                      ....+..+++.| +-|++-.+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.
T Consensus        79 H~~~~~~al~~G-khVl~EKP~a----------~~~~----e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~  143 (334)
T 3ohs_X           79 HKAAVMLCLAAG-KAVLCEKPMG----------VNAA----EVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGT  143 (334)
T ss_dssp             HHHHHHHHHHTT-CEEEEESSSS----------SSHH----HHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcC-CEEEEECCCC----------CCHH----HHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhcCC
Confidence            777788888776 4456655411          0011    111111122334555544333333456788888998887


Q ss_pred             ce
Q 017901          330 LK  331 (364)
Q Consensus       330 i~  331 (364)
                      +-
T Consensus       144 iG  145 (334)
T 3ohs_X          144 LG  145 (334)
T ss_dssp             TC
T ss_pred             CC
Confidence            64

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.29  E-value=0.081  Score=47.28  Aligned_cols=73  Identities=21%  Similarity=0.227  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCC--c-ee--eeCCCh-hHHHHhcC-CccEEEEC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGA--E-QA--VDYSSK-DIELAIKG-KFDAVLDT  244 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~--~-~v--~~~~~~-~~~~~i~g-~~D~vid~  244 (364)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++...   ..+.+++.  . ..  .|..+. ++.+.+.+ ++|+||.+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   82 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL   82 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            5789999999999999999998899999999876542   23444421  1 12  233333 23333332 27999999


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .|.
T Consensus        83 A~~   85 (345)
T 2z1m_A           83 AAQ   85 (345)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            885

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.29  E-value=0.0091  Score=51.10  Aligned_cols=95  Identities=21%  Similarity=0.130  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccHHHHHHcCCceeeeCCChh-H---HHHhc-CCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-I---ELAIK-GKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~---~~~i~-g~~D~vid~~g~  247 (364)
                      .++++||+||++++|..+++.+.. .|++|+...+++.... .+. .....|..+.+ .   .+.+. +++|++|.+.|.
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-~~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~   80 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-ENL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGI   80 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-TTE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-ccc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            467899999999999999877766 7888888876654210 000 00122333332 2   22222 359999999985


Q ss_pred             ch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          248 PE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       248 ~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..                         ..+.+...++++|++|.++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~  128 (244)
T 4e4y_A           81 LIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSD  128 (244)
T ss_dssp             CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCG
T ss_pred             CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCH
Confidence            20                         023445566667899988754

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.28  E-value=0.23  Score=44.89  Aligned_cols=136  Identities=11%  Similarity=0.034  Sum_probs=81.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCch
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPE  249 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~  249 (364)
                      -+|.|.| .|.+|...+..++..  +++++++++.. ++  ..+.+.|+ .+++    ++.+.+. ..+|+|+.|+....
T Consensus        14 ~rvgiiG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~~----~~~~ll~~~~~D~V~i~tp~~~   87 (354)
T 3q2i_A           14 IRFALVG-CGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGHA----SLTDMLAQTDADIVILTTPSGL   87 (354)
T ss_dssp             EEEEEEC-CSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEES----CHHHHHHHCCCSEEEECSCGGG
T ss_pred             ceEEEEc-CcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ceeC----CHHHHhcCCCCCEEEECCCcHH
Confidence            4689999 799998877777766  67888886543 33  44567776 3322    2333333 23999999999886


Q ss_pred             hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCC
Q 017901          250 TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGK  329 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  329 (364)
                      ....+..+++.|-. |.+..+..          ....    ....-.......+..+.-.+..+....+..+.+++++|.
T Consensus        88 h~~~~~~al~~gk~-v~~EKP~a----------~~~~----~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~  152 (354)
T 3q2i_A           88 HPTQSIECSEAGFH-VMTEKPMA----------TRWE----DGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKR  152 (354)
T ss_dssp             HHHHHHHHHHTTCE-EEECSSSC----------SSHH----HHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHCCCC-EEEeCCCc----------CCHH----HHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCC
Confidence            67777778877644 55554411          0111    111111122334554433332223457888899999987


Q ss_pred             cee
Q 017901          330 LKI  332 (364)
Q Consensus       330 i~~  332 (364)
                      +-.
T Consensus       153 iG~  155 (354)
T 3q2i_A          153 FGR  155 (354)
T ss_dssp             TCS
T ss_pred             CCc
Confidence            753

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.28  E-value=0.076  Score=47.37  Aligned_cols=77  Identities=17%  Similarity=0.135  Sum_probs=49.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHc----CCce-eeeCCCh-hHHHHhcC-CccE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAA----GAEQ-AVDYSSK-DIELAIKG-KFDA  240 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~----g~~~-v~~~~~~-~~~~~i~g-~~D~  240 (364)
                      +-.++.+|||+||+|.+|..+++.+...|.+|+++.++...   ..+..+    +... ..|..+. ++.+.+.+ ++|+
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            34678999999999999999999999999999999876542   233333    1111 1233333 33333332 2799


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      ||.+.|.
T Consensus        90 Vih~A~~   96 (335)
T 1rpn_A           90 VYNLAAQ   96 (335)
T ss_dssp             EEECCSC
T ss_pred             EEECccc
Confidence            9999885

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.26  E-value=0.068  Score=50.27  Aligned_cols=74  Identities=20%  Similarity=0.332  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH----HHHHHcCCce-eeeCCChh----HHHHhc---C-CccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----DRVLAAGAEQ-AVDYSSKD----IELAIK---G-KFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~~~~g~~~-v~~~~~~~----~~~~i~---g-~~D~  240 (364)
                      ++++++|+|++|++|..+++.+...|++|+.+.+++..    +...+.+... ..|..+.+    +.+.+.   | ++|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            57899999999999999999998899999988775432    3344555532 23433332    222222   4 3999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      +|.+.|.
T Consensus       292 lV~nAGv  298 (454)
T 3u0b_A          292 LVNNAGI  298 (454)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999885

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.26  E-value=0.038  Score=46.81  Aligned_cols=97  Identities=18%  Similarity=0.235  Sum_probs=63.1

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HH----HHHcCCce---eeeCCChhHHHHhc----
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DR----VLAAGAEQ---AVDYSSKDIELAIK----  235 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~----~~~~g~~~---v~~~~~~~~~~~i~----  235 (364)
                      ....++++||-.| +| .|..+..+++..  +.+|+++..+++. +.    +.+.|...   ++..+..+....+.    
T Consensus        68 ~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~  145 (232)
T 3cbg_A           68 ISLTGAKQVLEIG-VF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKP  145 (232)
T ss_dssp             HHHHTCCEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSS
T ss_pred             HHhcCCCEEEEec-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCC
Confidence            4455778999998 44 899999999886  5699999776653 33    34445532   22222223223321    


Q ss_pred             -CCccEEEECCCC---chhHHHHHhhccCCCEEEEEc
Q 017901          236 -GKFDAVLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       236 -g~~D~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (364)
                       +++|+||-....   ...+..+.++|++||.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             349999844332   235788899999999998754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.25  E-value=0.049  Score=48.23  Aligned_cols=67  Identities=15%  Similarity=0.161  Sum_probs=39.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhcC-CccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~g-~~D~vid~~g~  247 (364)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++....     + -...|..+. ++.+.+.+ ++|+||.+.|.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-----K-FEQVNLLDSNAVHHIIHDFQPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------CHHHHHHHCCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-----C-eEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence            46899999999999999999998999999998654321     1 111222222 22223321 28999999875

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.23  E-value=0.13  Score=45.39  Aligned_cols=88  Identities=20%  Similarity=0.182  Sum_probs=62.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHH
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG  254 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~  254 (364)
                      .+|.|.| .|.+|...++.+...|.+|++..+++++ +.+.+.|.....+ +   ..+.+.+ .|+||-|+..+..+...
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~-~---~~e~~~~-aDvvi~~vp~~~~~~~v   81 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAA-S---AREFAGV-VDALVILVVNAAQVRQV   81 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEES-S---STTTTTT-CSEEEECCSSHHHHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccC-C---HHHHHhc-CCEEEEECCCHHHHHHH
Confidence            5799999 8999999999999999999999877665 6677777653121 1   1222334 89999999986444444


Q ss_pred             H-------hhccCCCEEEEEcc
Q 017901          255 L-------NFLKRGGHYMTLHG  269 (364)
Q Consensus       255 ~-------~~l~~~G~~v~~g~  269 (364)
                      +       ..++++..++.++.
T Consensus        82 ~~~~~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           82 LFGEDGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             HC--CCCGGGSCTTCEEEECSC
T ss_pred             HhChhhHHhhCCCCCEEEecCC
Confidence            3       55677777777654

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.23  E-value=0.29  Score=43.94  Aligned_cols=138  Identities=15%  Similarity=0.027  Sum_probs=82.5

Q ss_pred             CCCEEEEEcCCc-hHHHHHHHHHHHc--CCeEEEeeCCcc-H--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCC
Q 017901          174 EGQRLLVLGGGG-AVGFAAVQFSVAS--GCHVSATCGSKS-I--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g-~~G~~~~~~a~~~--g~~vi~~~~~~~-~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g  246 (364)
                      ..-++.|.| +| .+|...+..++..  +++++++++... +  ..+.++|...+++    ++.+.+. ..+|+|+.|+.
T Consensus        17 ~~irvgiIG-~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~----~~~~ll~~~~vD~V~i~tp   91 (340)
T 1zh8_A           17 RKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD----SYEELLESGLVDAVDLTLP   91 (340)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES----CHHHHHHSSCCSEEEECCC
T ss_pred             CceeEEEEe-cCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccC----CHHHHhcCCCCCEEEEeCC
Confidence            334689999 67 7898777777665  568888866443 2  4456777644432    2344443 23999999999


Q ss_pred             CchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHH
Q 017901          247 APETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSE  326 (364)
Q Consensus       247 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (364)
                      .......+..+++.| +-|.+..+..          .+..    ....-......++..+.-.+..+....+..+.++++
T Consensus        92 ~~~H~~~~~~al~aG-khVl~EKPla----------~~~~----ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~  156 (340)
T 1zh8_A           92 VELNLPFIEKALRKG-VHVICEKPIS----------TDVE----TGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVE  156 (340)
T ss_dssp             GGGHHHHHHHHHHTT-CEEEEESSSS----------SSHH----HHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHCC-CcEEEeCCCC----------CCHH----HHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHh
Confidence            876777777788776 5556655411          0011    111111122334555544443334557888889998


Q ss_pred             cCCce
Q 017901          327 TGKLK  331 (364)
Q Consensus       327 ~g~i~  331 (364)
                      +|.|-
T Consensus       157 ~g~iG  161 (340)
T 1zh8_A          157 SGAIG  161 (340)
T ss_dssp             TTTTS
T ss_pred             cCCCC
Confidence            88764

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.22  E-value=0.12  Score=45.11  Aligned_cols=89  Identities=12%  Similarity=0.028  Sum_probs=61.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCch---
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPE---  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~---  249 (364)
                      +|.|.| .|.+|...++.++..|.  +|++..++++. +.+.+.|.......   +..+.+. + +|+||.|+....   
T Consensus         3 ~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~-aDvVilavp~~~~~~   77 (281)
T 2g5c_A            3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT---SIAKVEDFS-PDFVMLSSPVRTFRE   77 (281)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES---CGGGGGGTC-CSEEEECSCHHHHHH
T ss_pred             EEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC---CHHHHhcCC-CCEEEEcCCHHHHHH
Confidence            688999 89999999999998887  88888776554 66677776421111   2223444 5 999999999762   


Q ss_pred             hHHHHHhhccCCCEEEEEccC
Q 017901          250 TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+......++++..++.++..
T Consensus        78 v~~~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           78 IAKKLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHhhCCCCcEEEECCCC
Confidence            233344567788777776543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=95.21  E-value=0.058  Score=48.07  Aligned_cols=35  Identities=23%  Similarity=0.320  Sum_probs=30.9

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .+++++|+|+  ++++|.++++.+...|++|+.+.++
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            4788999998  7999999999999999999988653

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.18  E-value=0.24  Score=38.69  Aligned_cols=92  Identities=11%  Similarity=0.077  Sum_probs=58.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH-HHHH---HcCCceee-eCCChhHHHH--hcCCccEEEECCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-DRVL---AAGAEQAV-DYSSKDIELA--IKGKFDAVLDTIG  246 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~-~~~~---~~g~~~v~-~~~~~~~~~~--i~g~~D~vid~~g  246 (364)
                      .++++|.| .|.+|...++.+...|.+|+++.++. ++ +.+.   ..|...+. |..+.+....  +.+ +|+|+-+++
T Consensus         3 ~~~vlI~G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~-ad~vi~~~~   80 (153)
T 1id1_A            3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDR-CRAILALSD   80 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTT-CSEEEECSS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhh-CCEEEEecC
Confidence            46789999 79999999999999999999998863 32 2222   23443222 3333343333  335 999999999


Q ss_pred             CchhH---HHHHhhccCCCEEEEEc
Q 017901          247 APETE---RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       247 ~~~~~---~~~~~~l~~~G~~v~~g  268 (364)
                      ....-   ....+.+.+..+++...
T Consensus        81 ~d~~n~~~~~~a~~~~~~~~ii~~~  105 (153)
T 1id1_A           81 NDADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             CHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             ChHHHHHHHHHHHHHCCCCEEEEEE
Confidence            86322   23334444556776654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.16  E-value=0.045  Score=47.11  Aligned_cols=38  Identities=16%  Similarity=0.142  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH---cCCeEEEeeCCccH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVA---SGCHVSATCGSKSI  211 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~---~g~~vi~~~~~~~~  211 (364)
                      .+++++|+|+++++|..+++.+..   .|++|+.+.++++.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~   45 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM   45 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHH
Confidence            367899999999999999988887   89999999887653

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.15  E-value=0.15  Score=45.47  Aligned_cols=90  Identities=16%  Similarity=0.222  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~  252 (364)
                      ...+|.|.| .|.+|...++.+...|.+|++..+++++ +.+.+.|+...     .+..+.+.+ .|+||-|+..+..+.
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~e~~~~-aDvVi~~vp~~~~~~  102 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-----EQARAAARD-ADIVVSMLENGAVVQ  102 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-----SSHHHHHTT-CSEEEECCSSHHHHH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-----CCHHHHHhc-CCEEEEECCCHHHHH
Confidence            345899999 8999999999999999999998877665 55666665321     133444445 899999999754444


Q ss_pred             HHH------hhccCCCEEEEEccC
Q 017901          253 LGL------NFLKRGGHYMTLHGE  270 (364)
Q Consensus       253 ~~~------~~l~~~G~~v~~g~~  270 (364)
                      ..+      ..++++..++.++..
T Consensus       103 ~v~~~~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          103 DVLFAQGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             HHHTTTCHHHHCCTTCEEEECSCC
T ss_pred             HHHcchhHHhhCCCCCEEEecCCC
Confidence            433      357778788777643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.13  E-value=0.027  Score=47.78  Aligned_cols=69  Identities=23%  Similarity=0.220  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhc-----CCccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIK-----GKFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~-----g~~D~vid~~g~  247 (364)
                      +++++|+||+|.+|..+++.+...|++|+++.++.+.+   +. .....|..+. ++.+.+.     +++|++|.+.|.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~   76 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE---DL-IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV   76 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS---SS-EEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcccc---ce-EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccc
Confidence            57899999999999999999988899999998776521   11 0011233333 2222221     349999999874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.13  E-value=0.075  Score=47.19  Aligned_cols=94  Identities=12%  Similarity=0.085  Sum_probs=57.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCC---ccH--HHHHHc----CCc-eeeeCCCh-hHHHHhcCCccE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS---KSI--DRVLAA----GAE-QAVDYSSK-DIELAIKGKFDA  240 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~---~~~--~~~~~~----g~~-~v~~~~~~-~~~~~i~g~~D~  240 (364)
                      -.+++++|.| +|+.|.+++..+...|+ +|+.+.|+   .++  +++.++    +.. .+++..+. .+.+.+.+ +|+
T Consensus       146 l~gk~~lVlG-AGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~-~Di  223 (312)
T 3t4e_A          146 MRGKTMVLLG-AGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS-ADI  223 (312)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH-CSE
T ss_pred             cCCCEEEEEC-cCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC-ceE
Confidence            3578999999 69999999999999998 78888777   332  223332    221 23333332 11333445 999


Q ss_pred             EEECCCCch--hHHH----HHhhccCCCEEEEEc
Q 017901          241 VLDTIGAPE--TERL----GLNFLKRGGHYMTLH  268 (364)
Q Consensus       241 vid~~g~~~--~~~~----~~~~l~~~G~~v~~g  268 (364)
                      ||+|++..-  .-..    -...++++..++.+-
T Consensus       224 IINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v  257 (312)
T 3t4e_A          224 LTNGTKVGMKPLENESLIGDVSLLRPELLVTECV  257 (312)
T ss_dssp             EEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred             EEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence            999987541  0011    124566666666654

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=95.11  E-value=0.056  Score=48.56  Aligned_cols=86  Identities=21%  Similarity=0.185  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|.++.|.| .|.+|..+++.++.+|++|++..+..+.. +.+ .+    .+.  ++.+.+.. .|+|+.++.....   
T Consensus       144 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~----~~~--~l~ell~~-aDvV~~~~P~~~~t~~  213 (333)
T 1dxy_A          144 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKG-DHP-DF----DYV--SLEDLFKQ-SDVIDLHVPGIEQNTH  213 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSS-CCT-TC----EEC--CHHHHHHH-CSEEEECCCCCGGGTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCcchh-hHh-cc----ccC--CHHHHHhc-CCEEEEcCCCchhHHH
Confidence            468999999 89999999999999999999987655432 111 11    111  23333334 8999999886422   


Q ss_pred             -H-HHHHhhccCCCEEEEEcc
Q 017901          251 -E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~  269 (364)
                       + ...+..|++++.+|.++.
T Consensus       214 li~~~~l~~mk~ga~lIn~sr  234 (333)
T 1dxy_A          214 IINEAAFNLMKPGAIVINTAR  234 (333)
T ss_dssp             SBCHHHHHHSCTTEEEEECSC
T ss_pred             HhCHHHHhhCCCCcEEEECCC
Confidence             2 457788999999998874

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.11  E-value=0.3  Score=41.70  Aligned_cols=97  Identities=12%  Similarity=0.161  Sum_probs=63.9

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HH----HHHcCCce---eeeCCChhHHHHh-----
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DR----VLAAGAEQ---AVDYSSKDIELAI-----  234 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~----~~~~g~~~---v~~~~~~~~~~~i-----  234 (364)
                      ....++++||-.|  ++.|..+..+++.+  +.+|+++..+++. +.    +.+.|...   ++..+..++...+     
T Consensus        75 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~  152 (247)
T 1sui_A           75 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEK  152 (247)
T ss_dssp             HHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGG
T ss_pred             HHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccC
Confidence            4456778999998  34788888999886  5799999776653 33    34456532   3333333333333     


Q ss_pred             -cCCccEEEECCCC---chhHHHHHhhccCCCEEEEEc
Q 017901          235 -KGKFDAVLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       235 -~g~~D~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (364)
                       .+++|+||-....   ...+..+.++|++||.++.-.
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence             2459998854432   235778999999999998653

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.10  E-value=0.04  Score=48.41  Aligned_cols=85  Identities=20%  Similarity=0.115  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|+++.|.| .|.+|...++.++.+|.+|++..++.+...    ... .    ..++.+.+.. .|+|+-++.....   
T Consensus       121 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----~~~-~----~~~l~ell~~-aDiV~l~~P~t~~t~~  189 (290)
T 3gvx_A          121 YGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQN----VDV-I----SESPADLFRQ-SDFVLIAIPLTDKTRG  189 (290)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTT----CSE-E----CSSHHHHHHH-CSEEEECCCCCTTTTT
T ss_pred             ecchheeec-cCchhHHHHHHHHhhCcEEEEEeccccccc----ccc-c----cCChHHHhhc-cCeEEEEeeccccchh
Confidence            478999999 999999999999999999999977654311    011 1    1133344444 8999999885211   


Q ss_pred             -H-HHHHhhccCCCEEEEEcc
Q 017901          251 -E-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~  269 (364)
                       + ...+..|+++..+|.++.
T Consensus       190 li~~~~l~~mk~gailIN~aR  210 (290)
T 3gvx_A          190 MVNSRLLANARKNLTIVNVAR  210 (290)
T ss_dssp             CBSHHHHTTCCTTCEEEECSC
T ss_pred             hhhHHHHhhhhcCceEEEeeh
Confidence             1 467789999999999874

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.10  E-value=0.017  Score=49.25  Aligned_cols=95  Identities=21%  Similarity=0.233  Sum_probs=61.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc-----eeeeCCChhHHHHhc-CCccEE-EE
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-----QAVDYSSKDIELAIK-GKFDAV-LD  243 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~-----~v~~~~~~~~~~~i~-g~~D~v-id  243 (364)
                      ..+|.+||-.| +| .|..+..+++..+.+++++.-++.. +.+++....     .++..+..+...... +.+|.| +|
T Consensus        58 ~~~G~rVLdiG-~G-~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D  135 (236)
T 3orh_A           58 SSKGGRVLEVG-FG-MAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYD  135 (236)
T ss_dssp             TTTCEEEEEEC-CT-TSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred             ccCCCeEEEEC-CC-ccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEe
Confidence            46899999999 44 6888888888877889988666553 555543322     122222222222222 348887 56


Q ss_pred             CCCCc----------hhHHHHHhhccCCCEEEEEc
Q 017901          244 TIGAP----------ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       244 ~~g~~----------~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +....          ..+..+.+.|+|||+++.+.
T Consensus       136 ~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             eeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            65432          23567889999999998875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.10  E-value=0.062  Score=47.62  Aligned_cols=72  Identities=22%  Similarity=0.301  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-Ccc----HHHHHHcCC--c--ee--eeCCC-hhHHHHhcCCccEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS----IDRVLAAGA--E--QA--VDYSS-KDIELAIKGKFDAVL  242 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~----~~~~~~~g~--~--~v--~~~~~-~~~~~~i~g~~D~vi  242 (364)
                      |++|||+||+|.+|..+++.+...|.+|+++.+ +..    ...+.++..  .  .+  .|..+ .++...+.+ +|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEG-CVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTT-CSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcC-CCEEE
Confidence            568999999999999999999899999999876 431    122222211  0  11  23333 244555556 99999


Q ss_pred             ECCCC
Q 017901          243 DTIGA  247 (364)
Q Consensus       243 d~~g~  247 (364)
                      .+.+.
T Consensus        80 h~A~~   84 (322)
T 2p4h_X           80 HTASP   84 (322)
T ss_dssp             ECCCC
T ss_pred             EcCCc
Confidence            98863

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.07  E-value=0.083  Score=45.32  Aligned_cols=86  Identities=19%  Similarity=0.201  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCc-------------------cH-----HHHHHcCCc-ee--ee--
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK-------------------SI-----DRVLAAGAE-QA--VD--  224 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~-------------------~~-----~~~~~~g~~-~v--~~--  224 (364)
                      +.+|+|.| .|++|..+++.+...|. +++.+.++.                   .+     +.+.++... .+  ++  
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            46899999 79999999999988898 666665443                   22     123333322 11  11  


Q ss_pred             CCChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCC
Q 017901          225 YSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG  262 (364)
Q Consensus       225 ~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G  262 (364)
                      .+..+..+.+.+ +|+||+|+++........+.....|
T Consensus       110 ~~~~~~~~~~~~-~DvVi~~~d~~~~~~~l~~~~~~~~  146 (249)
T 1jw9_B          110 LDDAELAALIAE-HDLVLDCTDNVAVRNQLNAGCFAAK  146 (249)
T ss_dssp             CCHHHHHHHHHT-SSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred             CCHhHHHHHHhC-CCEEEEeCCCHHHHHHHHHHHHHcC
Confidence            122233344446 9999999998744333334333334

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.02  E-value=0.054  Score=49.50  Aligned_cols=72  Identities=18%  Similarity=0.105  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++... ......+... ..|..+. ++...+.+ +|+||.+.+.
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-~d~Vih~A~~  103 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEG-VDHVFNLAAD  103 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTT-CSEEEECCCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCC-CCEEEECcee
Confidence            4689999999999999999998899999999886543 1111123322 1244443 34444556 9999999884

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.01  E-value=0.11  Score=46.86  Aligned_cols=73  Identities=19%  Similarity=0.140  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--H---HHH-HH------cCCce-eeeCCCh-hHHHHhcCCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--I---DRV-LA------AGAEQ-AVDYSSK-DIELAIKGKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~---~~~-~~------~g~~~-v~~~~~~-~~~~~i~g~~D  239 (364)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.++..  .   ..+ ..      .+... ..|..+. ++.+.+.+ +|
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d  104 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG-VD  104 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT-CS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC-CC
Confidence            3578999999999999999999999999999987543  1   111 11      12221 1233443 34444446 99


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      +||.+.|.
T Consensus       105 ~vih~A~~  112 (352)
T 1sb8_A          105 YVLHQAAL  112 (352)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCcc
Confidence            99999985

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.01  E-value=0.055  Score=48.48  Aligned_cols=36  Identities=8%  Similarity=0.064  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCc
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSK  209 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~  209 (364)
                      ++++++|+|+++  ++|.++++.+...|++|+..++++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            367899999764  999999999999999999776544

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=94.98  E-value=0.12  Score=46.32  Aligned_cols=72  Identities=18%  Similarity=0.223  Sum_probs=48.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCcc---HHHHHHc---CCce-eeeCCCh-hHHHHhcCCccEEEECC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS---IDRVLAA---GAEQ-AVDYSSK-DIELAIKGKFDAVLDTI  245 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~---~~~~~~~---g~~~-v~~~~~~-~~~~~i~g~~D~vid~~  245 (364)
                      .+|||+||+|.+|..+++.+...  |.+|+++.++..   ...+.++   +... ..|..+. .+.+.+.+ +|+||.+.
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~vih~A   83 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK-ADAIVHYA   83 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT-CSEEEECC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhc-CCEEEECC
Confidence            47999999999999999888877  889999987542   1222222   1111 1244443 34444456 99999999


Q ss_pred             CCc
Q 017901          246 GAP  248 (364)
Q Consensus       246 g~~  248 (364)
                      |..
T Consensus        84 ~~~   86 (348)
T 1oc2_A           84 AES   86 (348)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            853

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=94.97  E-value=0.067  Score=47.58  Aligned_cols=89  Identities=16%  Similarity=0.185  Sum_probs=60.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH--cCCeEEEeeCCc--c--HHHHHHcCCceeeeCCChhHHHHh--cCCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVA--SGCHVSATCGSK--S--IDRVLAAGAEQAVDYSSKDIELAI--KGKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~--~g~~vi~~~~~~--~--~~~~~~~g~~~v~~~~~~~~~~~i--~g~~D~vid~~g~  247 (364)
                      -+|.|.| +|.+|...+..+..  .+.+++++++..  +  +..++++|.... ..+-+++.+..  .+ +|+||+|++.
T Consensus         5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~-~~~~e~ll~~~~~~~-iDvV~~atp~   81 (312)
T 1nvm_B            5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT-YAGVEGLIKLPEFAD-IDFVFDATSA   81 (312)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE-SSHHHHHHHSGGGGG-EEEEEECSCH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc-cCCHHHHHhccCCCC-CcEEEECCCh
Confidence            4789999 89999988888843  467787775433  3  355677776422 11111222210  24 9999999998


Q ss_pred             chhHHHHHhhccC--CCEEEEE
Q 017901          248 PETERLGLNFLKR--GGHYMTL  267 (364)
Q Consensus       248 ~~~~~~~~~~l~~--~G~~v~~  267 (364)
                      ......+..+++.  |.++++.
T Consensus        82 ~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           82 SAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCEEEEc
Confidence            7677788888888  8888774

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=94.94  E-value=0.049  Score=49.53  Aligned_cols=72  Identities=17%  Similarity=0.208  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHH-cCCcee-eeCC-Ch-hHHHHhcCCccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLA-AGAEQA-VDYS-SK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~-~g~~~v-~~~~-~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      +.+|||+||+|.+|..+++.+... |.+|+++.++... ..+.. .+...+ .|.. +. .+.+.+.+ +|+||.+.+.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~-~d~Vih~A~~  101 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKK-CDVILPLVAI  101 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHH-CSEEEECBCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhcc-CCEEEEcCcc
Confidence            478999999999999999988887 8999999887553 22222 233222 2444 33 33344446 9999998874

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=94.92  E-value=0.25  Score=44.61  Aligned_cols=136  Identities=14%  Similarity=0.099  Sum_probs=78.2

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHc-CCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHH
Q 017901          176 QRLLVLGGGGAVGFA-AVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETER  252 (364)
Q Consensus       176 ~~vli~g~~g~~G~~-~~~~a~~~-g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~  252 (364)
                      -+|.|.| .|.+|.. .+..++.. ++++++++...........+...++    .++.+.+. ..+|+|+.|+.......
T Consensus         8 ~rvgiiG-~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~~ll~~~~vD~V~i~tp~~~H~~   82 (352)
T 3kux_A            8 IKVGLLG-YGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVV----SDPQMLFNDPSIDLIVIPTPNDTHFP   82 (352)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEE----SCHHHHHHCSSCCEEEECSCTTTHHH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceE----CCHHHHhcCCCCCEEEEeCChHHHHH
Confidence            4689999 8999985 66666555 7789888765443222222222222    13334443 23999999999876777


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      .+..+++.|-. |.+..+..          . ..   .....-......+++.+.-.+..+....+..+.+++.+|.+-
T Consensus        83 ~~~~al~aGkh-V~~EKPla----------~-~~---~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG  146 (352)
T 3kux_A           83 LAQSALAAGKH-VVVDKPFT----------V-TL---SQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLG  146 (352)
T ss_dssp             HHHHHHHTTCE-EEECSSCC----------S-CH---HHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHCCCc-EEEECCCc----------C-CH---HHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhcCCCC
Confidence            88888877744 55655411          0 11   111111112233455554444333345678888889888764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=94.91  E-value=0.12  Score=44.47  Aligned_cols=65  Identities=20%  Similarity=0.308  Sum_probs=45.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhcC-CccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~g-~~D~vid~~g~~  248 (364)
                      +++|+||+|.+|..+++.+. .|.+|+++.++....    .+  ...|..+. ++.+.+.+ ++|+||.+.|..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~----~~--~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~   68 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ----GG--YKLDLTDFPRLEDFIIKKRPDVIINAAAMT   68 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT----TC--EECCTTSHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC----CC--ceeccCCHHHHHHHHHhcCCCEEEECCccc
Confidence            58999999999999998887 489999998876432    12  33454443 23333331 389999999853

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=94.91  E-value=0.061  Score=48.28  Aligned_cols=86  Identities=15%  Similarity=0.042  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch----
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~----  249 (364)
                      .|.++.|.| .|.+|..+++.++.+|++|++..+..+.. +.+ ++    .+.  ++.+.+.. .|+|+.++....    
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~----~~~--~l~ell~~-aDvV~~~~p~t~~t~~  214 (331)
T 1xdw_A          145 RNCTVGVVG-LGRIGRVAAQIFHGMGATVIGEDVFEIKG-IED-YC----TQV--SLDEVLEK-SDIITIHAPYIKENGA  214 (331)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCS-CTT-TC----EEC--CHHHHHHH-CSEEEECCCCCTTTCC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCccHH-HHh-cc----ccC--CHHHHHhh-CCEEEEecCCchHHHH
Confidence            467899999 89999999999999999999987655432 111 11    111  33333434 899999877531    


Q ss_pred             hH-HHHHhhccCCCEEEEEcc
Q 017901          250 TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~~-~~~~~~l~~~G~~v~~g~  269 (364)
                      .+ ...+..|++++.+|.++-
T Consensus       215 li~~~~l~~mk~ga~lin~sr  235 (331)
T 1xdw_A          215 VVTRDFLKKMKDGAILVNCAR  235 (331)
T ss_dssp             SBCHHHHHTSCTTEEEEECSC
T ss_pred             HhCHHHHhhCCCCcEEEECCC
Confidence            22 457788999999998874

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=94.90  E-value=0.17  Score=45.57  Aligned_cols=86  Identities=24%  Similarity=0.299  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~  252 (364)
                      +.+|.|.| .|.+|.+.++.++..|.+|++..++..  .+.+.+.|.. +.     +..+.+.+ +|+|+-|+... ...
T Consensus        16 ~~~I~IIG-~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~-~~-----~~~e~~~~-aDvVilavp~~-~~~   86 (338)
T 1np3_A           16 GKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLK-VA-----DVKTAVAA-ADVVMILTPDE-FQG   86 (338)
T ss_dssp             TSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCE-EE-----CHHHHHHT-CSEEEECSCHH-HHH
T ss_pred             CCEEEEEC-chHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCE-Ec-----cHHHHHhc-CCEEEEeCCcH-HHH
Confidence            35799999 899999999999999999888776654  3566777864 22     23334445 99999999986 333


Q ss_pred             HHH-----hhccCCCEEEEEcc
Q 017901          253 LGL-----NFLKRGGHYMTLHG  269 (364)
Q Consensus       253 ~~~-----~~l~~~G~~v~~g~  269 (364)
                      ..+     ..++++..++.+++
T Consensus        87 ~v~~~~i~~~l~~~~ivi~~~g  108 (338)
T 1np3_A           87 RLYKEEIEPNLKKGATLAFAHG  108 (338)
T ss_dssp             HHHHHHTGGGCCTTCEEEESCC
T ss_pred             HHHHHHHHhhCCCCCEEEEcCC
Confidence            333     35667777776543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.90  E-value=0.11  Score=46.75  Aligned_cols=73  Identities=18%  Similarity=0.190  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCce-eeeCCCh-hHHHHhcC-CccEEEECC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAEQ-AVDYSSK-DIELAIKG-KFDAVLDTI  245 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~~-v~~~~~~-~~~~~i~g-~~D~vid~~  245 (364)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++...  .....+    +... ..|..+. .+...+.+ ++|+||.+.
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            5789999999999999999999999999999876542  222222    2211 1233333 23333332 289999999


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        89 ~~   90 (357)
T 1rkx_A           89 AQ   90 (357)
T ss_dssp             SC
T ss_pred             CC
Confidence            84

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=94.90  E-value=0.089  Score=47.01  Aligned_cols=72  Identities=22%  Similarity=0.248  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H---HHHHcCC----ceee--eCCC-hhHHHHhcCCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D---RVLAAGA----EQAV--DYSS-KDIELAIKGKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~---~~~~~g~----~~v~--~~~~-~~~~~~i~g~~D~vi  242 (364)
                      .+++|||+||+|.+|..+++.+...|.+|+++.++... .   .+.++..    -.++  |..+ .++...+.+ +|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKG-CTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTT-CSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcC-CCEEE
Confidence            46789999999999999999998899999998776442 1   1112211    0122  3333 234455556 99999


Q ss_pred             ECCC
Q 017901          243 DTIG  246 (364)
Q Consensus       243 d~~g  246 (364)
                      .+.+
T Consensus        83 h~A~   86 (337)
T 2c29_D           83 HVAT   86 (337)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9876

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=94.89  E-value=0.075  Score=47.13  Aligned_cols=99  Identities=21%  Similarity=0.176  Sum_probs=65.0

Q ss_pred             Hhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc---eeeeCCChhHHHHhcCCc
Q 017901          168 CAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       168 ~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~---~v~~~~~~~~~~~i~g~~  238 (364)
                      +... ++++++||-.| +| .|..+..+++..|++|+++..++.. +.    +...|..   .++..+-.++. ...+++
T Consensus       110 ~~l~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~f  186 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAG-CG-RGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-FDKGAV  186 (312)
T ss_dssp             TTSCCCCTTCEEEEES-CT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCE
T ss_pred             HHhccCCCCCEEEEec-CC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-CCCCCE
Confidence            4444 78899999998 44 5888888988879999999776653 33    3344533   12222211111 001349


Q ss_pred             cEEEEC-----CCCchhHHHHHhhccCCCEEEEEcc
Q 017901          239 DAVLDT-----IGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       239 D~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |+|+..     .+-...+..+.+.|+|||+++....
T Consensus       187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            999873     2223478899999999999998764

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=94.89  E-value=0.15  Score=45.18  Aligned_cols=87  Identities=16%  Similarity=0.215  Sum_probs=60.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHH
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG  254 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~  254 (364)
                      .+|.|.| .|.+|...++.+...|.+|+...+++++ +.+.+.|.. +.  .  +..+.+.+ +|+||.|+..+..+...
T Consensus        31 ~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-~~--~--~~~~~~~~-~DvVi~av~~~~~~~~v  103 (316)
T 2uyy_A           31 KKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR-LG--R--TPAEVVST-CDITFACVSDPKAAKDL  103 (316)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCE-EC--S--CHHHHHHH-CSEEEECCSSHHHHHHH
T ss_pred             CeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCE-Ec--C--CHHHHHhc-CCEEEEeCCCHHHHHHH
Confidence            5799999 8999999999888889999888776654 556666653 21  1  22233334 89999999965455544


Q ss_pred             H-------hhccCCCEEEEEcc
Q 017901          255 L-------NFLKRGGHYMTLHG  269 (364)
Q Consensus       255 ~-------~~l~~~G~~v~~g~  269 (364)
                      +       ..++++..++.++.
T Consensus       104 ~~~~~~~~~~l~~~~~vv~~s~  125 (316)
T 2uyy_A          104 VLGPSGVLQGIRPGKCYVDMST  125 (316)
T ss_dssp             HHSTTCGGGGCCTTCEEEECSC
T ss_pred             HcCchhHhhcCCCCCEEEECCC
Confidence            4       44667777777754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=94.88  E-value=0.12  Score=47.10  Aligned_cols=96  Identities=16%  Similarity=0.089  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHH-HcCCce-eeeCCChh-HHHHhcCCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVL-AAGAEQ-AVDYSSKD-IELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~-~~g~~~-v~~~~~~~-~~~~i~g~~D~vid~~g~  247 (364)
                      .+.+|+|+||+|.+|..+++.+...| .+|+++.++...  +.+. ..++.. ..|..+.+ +.+.+.+ +|+||.+.+.
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~-~d~Vih~A~~  109 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDE-YDYVFHLATY  109 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSC-CSEEEECCCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhC-CCEEEECCCc
Confidence            35789999999999999999999999 999999876432  1111 111111 12333333 3333346 9999999885


Q ss_pred             chh-----------------HHHHHhhccCC---CEEEEEccC
Q 017901          248 PET-----------------ERLGLNFLKRG---GHYMTLHGE  270 (364)
Q Consensus       248 ~~~-----------------~~~~~~~l~~~---G~~v~~g~~  270 (364)
                      ...                 ....++.++..   +++|.++..
T Consensus       110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~  152 (377)
T 2q1s_A          110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAG  152 (377)
T ss_dssp             SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC
T ss_pred             cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCH
Confidence            311                 23344555543   488887753

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=94.87  E-value=0.093  Score=47.65  Aligned_cols=32  Identities=16%  Similarity=0.171  Sum_probs=28.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS  208 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~  208 (364)
                      +|||+||+|.+|..+++.+...|. +|++..++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~   34 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ   34 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence            699999999999999999988898 99988773

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=94.87  E-value=0.17  Score=45.86  Aligned_cols=136  Identities=9%  Similarity=-0.039  Sum_probs=79.7

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHc-CCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHH
Q 017901          176 QRLLVLGGGGAVGFA-AVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETER  252 (364)
Q Consensus       176 ~~vli~g~~g~~G~~-~~~~a~~~-g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~  252 (364)
                      -+|.|.| +|.+|.. .+..++.. +++++++++........+.+...+++    ++.+.+. ..+|+|+.|+.......
T Consensus         6 ~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~----~~~~ll~~~~vD~V~i~tp~~~H~~   80 (362)
T 3fhl_A            6 IKTGLAA-FGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVR----SFKELTEDPEIDLIVVNTPDNTHYE   80 (362)
T ss_dssp             EEEEESC-CSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEES----CSHHHHTCTTCCEEEECSCGGGHHH
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceEC----CHHHHhcCCCCCEEEEeCChHHHHH
Confidence            3688999 7999985 56655554 78999887654333333443222321    2333333 23999999999986777


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      .+..+++.|- -|++..+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.|-
T Consensus        81 ~~~~al~aGk-hVl~EKP~a----------~~~~----ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG  144 (362)
T 3fhl_A           81 YAGMALEAGK-NVVVEKPFT----------STTK----QGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLLG  144 (362)
T ss_dssp             HHHHHHHTTC-EEEEESSCC----------SSHH----HHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTTTS
T ss_pred             HHHHHHHCCC-eEEEecCCC----------CCHH----HHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHcCCCC
Confidence            8888888764 455654411          0011    11111112233455555444333445788889999998765

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=94.86  E-value=0.096  Score=49.71  Aligned_cols=77  Identities=19%  Similarity=0.279  Sum_probs=52.0

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCcc----H----HHHHHcCCce-e--eeCCChh-HHHHhc--
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKS----I----DRVLAAGAEQ-A--VDYSSKD-IELAIK--  235 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~----~----~~~~~~g~~~-v--~~~~~~~-~~~~i~--  235 (364)
                      .++++.++||+||+|++|..+++.+...|++ |+.+.++..    .    +.+.+.|... +  .|..+.+ +...+.  
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3567899999999999999999988888994 888877642    1    2344556532 2  2333332 222222  


Q ss_pred             ---CCccEEEECCCC
Q 017901          236 ---GKFDAVLDTIGA  247 (364)
Q Consensus       236 ---g~~D~vid~~g~  247 (364)
                         +++|.||.+.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence               357999999984

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=94.86  E-value=0.09  Score=47.33  Aligned_cols=86  Identities=17%  Similarity=0.106  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch----
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~----  249 (364)
                      .|+++.|.| .|.+|..+++.++.+|.+|++..+..+...  +.+..    +.  ++.+.+.. .|+|+-++....    
T Consensus       147 ~gktvgIiG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~----~~--~l~ell~~-aDvV~l~~Plt~~t~~  216 (343)
T 2yq5_A          147 YNLTVGLIG-VGHIGSAVAEIFSAMGAKVIAYDVAYNPEF--EPFLT----YT--DFDTVLKE-ADIVSLHTPLFPSTEN  216 (343)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCGGG--TTTCE----EC--CHHHHHHH-CSEEEECCCCCTTTTT
T ss_pred             CCCeEEEEe-cCHHHHHHHHHHhhCCCEEEEECCChhhhh--hcccc----cc--CHHHHHhc-CCEEEEcCCCCHHHHH
Confidence            478999999 999999999999999999999977654311  11221    11  33344434 899999988521    


Q ss_pred             h-HHHHHhhccCCCEEEEEcc
Q 017901          250 T-ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~-~~~~~~~l~~~G~~v~~g~  269 (364)
                      . -...+..|+++..+|.++-
T Consensus       217 li~~~~l~~mk~gailIN~aR  237 (343)
T 2yq5_A          217 MIGEKQLKEMKKSAYLINCAR  237 (343)
T ss_dssp             CBCHHHHHHSCTTCEEEECSC
T ss_pred             HhhHHHHhhCCCCcEEEECCC
Confidence            1 2467788999999998873

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=94.85  E-value=0.12  Score=43.48  Aligned_cols=98  Identities=23%  Similarity=0.265  Sum_probs=63.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCC--ce--eeeCCChhHH--HHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGA--EQ--AVDYSSKDIE--LAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~--~~--v~~~~~~~~~--~~i~g~~D  239 (364)
                      ....++++++||-.| +|. |..+..+++..| .+|+++..+++. +.+++...  +.  .+..+..+..  ....+.+|
T Consensus        68 ~~~~~~~~~~VLDlG-cG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D  145 (230)
T 1fbn_A           68 KVMPIKRDSKILYLG-ASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVD  145 (230)
T ss_dssp             CCCCCCTTCEEEEES-CCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEE
T ss_pred             cccCCCCCCEEEEEc-ccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEE
Confidence            345677899999999 554 889999999876 689999776653 44433211  11  1211111100  00113499


Q ss_pred             EEEECCCCc---h-hHHHHHhhccCCCEEEEE
Q 017901          240 AVLDTIGAP---E-TERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       240 ~vid~~g~~---~-~~~~~~~~l~~~G~~v~~  267 (364)
                      +|+.....+   . .+..+.+.|++||+++..
T Consensus       146 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          146 VIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            999766554   2 378888999999999886

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=94.84  E-value=0.15  Score=44.12  Aligned_cols=84  Identities=21%  Similarity=0.167  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      +++++|.| +|+.|.+++..+...|.+|+.+.|+.++  +++ ++++. +....+-      .+ +|+||+|++...   
T Consensus       118 ~k~vlvlG-aGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~l------~~-~DiVInaTp~Gm~~~  187 (269)
T 3phh_A          118 YQNALILG-AGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPPK------SA-FDLIINATSASLHNE  187 (269)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCCS------SC-CSEEEECCTTCCCCS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHHh------cc-CCEEEEcccCCCCCC
Confidence            88999999 7999999999999999888888887664  445 77753 3333221      13 999999987531   


Q ss_pred             -hHH--HHHhhccCCCEEEEEc
Q 017901          250 -TER--LGLNFLKRGGHYMTLH  268 (364)
Q Consensus       250 -~~~--~~~~~l~~~G~~v~~g  268 (364)
                       .+.  .....++++..++.+.
T Consensus       188 ~~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          188 LPLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             CSSCHHHHHHHHHHCSEEEESC
T ss_pred             CCCChHHHHhhCCCCCEEEEeC
Confidence             111  1222567777777765

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=94.83  E-value=0.12  Score=42.76  Aligned_cols=96  Identities=17%  Similarity=0.056  Sum_probs=64.2

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce--eeeCCChhHHHHhcCCccEEEECCC
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ--AVDYSSKDIELAIKGKFDAVLDTIG  246 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~--v~~~~~~~~~~~i~g~~D~vid~~g  246 (364)
                      ..+.++.+||-.| +| .|..+..+++. |++++++..++.. +.+++.+...  ++..+-.++  ...+++|+|+....
T Consensus        42 ~~~~~~~~vLdiG-~G-~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~  116 (218)
T 3ou2_A           42 RAGNIRGDVLELA-SG-TGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW--TPDRQWDAVFFAHW  116 (218)
T ss_dssp             TTTTSCSEEEEES-CT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC--CCSSCEEEEEEESC
T ss_pred             hcCCCCCeEEEEC-CC-CCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC--CCCCceeEEEEech
Confidence            4477888999998 44 48888888877 8899999776664 6666655332  222222222  11134999987543


Q ss_pred             C--------chhHHHHHhhccCCCEEEEEccC
Q 017901          247 A--------PETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       247 ~--------~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      -        ...+..+.+.|++||.++.....
T Consensus       117 l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          117 LAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             hhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            1        23578888999999999888643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.81  E-value=0.095  Score=49.18  Aligned_cols=91  Identities=16%  Similarity=0.257  Sum_probs=56.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCcee--eeCCCh-hHHHHhcCCccEEEECCCCch
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQA--VDYSSK-DIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~~v--~~~~~~-~~~~~i~g~~D~vid~~g~~~  249 (364)
                      +.+|+|.| +|.+|..+++.+...|.+|+++.++.++ +. +.+++....  .|..+. ++.+.+.+ +|+|++|++...
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~-~DvVIn~a~~~~   80 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAK-HDLVISLIPYTF   80 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTT-SSEEEECCC--C
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcC-CcEEEECCcccc
Confidence            56899998 8999999999888889998888776543 22 222321112  233332 34445555 999999998642


Q ss_pred             hHHHHHhhccCCCEEEEE
Q 017901          250 TERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~  267 (364)
                      .......+++++-.++..
T Consensus        81 ~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           81 HATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             HHHHHHHHHHHTCEEEES
T ss_pred             chHHHHHHHhCCCeEEEe
Confidence            222344555665555544

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=94.79  E-value=0.21  Score=43.33  Aligned_cols=87  Identities=10%  Similarity=0.053  Sum_probs=58.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---hHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---TER  252 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---~~~  252 (364)
                      +|.|.| .|.+|...+..+...|.+|+++.++++. +.+.+.|.......+   ..+. .+ +|+||.|+....   .+.
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~-~~-~D~vi~av~~~~~~~~~~   75 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQD---LSLL-QT-AKIIFLCTPIQLILPTLE   75 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESC---GGGG-TT-CSEEEECSCHHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCC---HHHh-CC-CCEEEEECCHHHHHHHHH
Confidence            588999 8999999999998889999888776654 556666753111111   1222 34 999999999751   233


Q ss_pred             HHHhhccCCCEEEEEcc
Q 017901          253 LGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~  269 (364)
                      .....++++..++.++.
T Consensus        76 ~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           76 KLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             HHGGGSCTTCEEEECCS
T ss_pred             HHHhhCCCCCEEEECCC
Confidence            33445667777777754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=94.77  E-value=0.059  Score=46.96  Aligned_cols=58  Identities=9%  Similarity=0.154  Sum_probs=42.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhc--CCccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIK--GKFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~--g~~D~vid~~g~~  248 (364)
                      +|||+||+|.+|..+++.+...|.+|+++.+.+             .|..+. .+.+.+.  + +|+||.+.+..
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~D~~d~~~~~~~~~~~~-~d~vi~~a~~~   67 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL-------------LDITNISQVQQVVQEIR-PHIIIHCAAYT   67 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT-------------SCTTCHHHHHHHHHHHC-CSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc-------------cCCCCHHHHHHHHHhcC-CCEEEECCccc
Confidence            799999999999999999988899999998732             122222 2333333  4 88999888753

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=94.77  E-value=0.13  Score=46.41  Aligned_cols=137  Identities=9%  Similarity=0.013  Sum_probs=78.7

Q ss_pred             EEEEEcCCchHHH-HHHHHHHHc-CCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHH
Q 017901          177 RLLVLGGGGAVGF-AAVQFSVAS-GCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETER  252 (364)
Q Consensus       177 ~vli~g~~g~~G~-~~~~~a~~~-g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~  252 (364)
                      +|.|.| .|.+|. ..+..++.. +++++++++... .+.+.+.+...+-.+.  ++.+.+. ..+|+|+.|+.......
T Consensus         4 rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~--~~~~ll~~~~~D~V~i~tp~~~h~~   80 (349)
T 3i23_A            4 KMGFIG-FGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTA--DLNELLTDPEIELITICTPAHTHYD   80 (349)
T ss_dssp             EEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEES--CTHHHHSCTTCCEEEECSCGGGHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEEC--CHHHHhcCCCCCEEEEeCCcHHHHH
Confidence            688999 899997 566655544 779998876543 3455553321111111  2333333 23999999999886777


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      .+..+++.| +-|++..+..          . ..   .....-......+++.+.-.+..+....+..+.+++++|.+-
T Consensus        81 ~~~~al~aG-k~Vl~EKP~a----------~-~~---~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG  144 (349)
T 3i23_A           81 LAKQAILAG-KSVIVEKPFC----------D-TL---EHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLG  144 (349)
T ss_dssp             HHHHHHHTT-CEEEECSCSC----------S-SH---HHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHcC-CEEEEECCCc----------C-CH---HHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCC
Confidence            888888866 4455654411          0 11   111111112233455554433333345678888889888764

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=94.76  E-value=0.071  Score=44.58  Aligned_cols=100  Identities=14%  Similarity=0.126  Sum_probs=64.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-H----HHHHcCCce---eeeCCChhHHHHhc--
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-D----RVLAAGAEQ---AVDYSSKDIELAIK--  235 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~~~~~i~--  235 (364)
                      ......++.+||-.| +| .|..+..+++..  +.+|+++..+++. +    .+.+.|...   ++..+..+....+.  
T Consensus        52 ~l~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~  129 (223)
T 3duw_A           52 LLVQIQGARNILEIG-TL-GGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENE  129 (223)
T ss_dssp             HHHHHHTCSEEEEEC-CT-TSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT
T ss_pred             HHHHhhCCCEEEEec-CC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc
Confidence            334556788999998 33 688888899887  5799999776653 3    344556532   33333223222221  


Q ss_pred             --CCccEEEECCCCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          236 --GKFDAVLDTIGAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       236 --g~~D~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                        +++|+||-.....   ..+..+.+.|++||.++.-..
T Consensus       130 ~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  168 (223)
T 3duw_A          130 KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV  168 (223)
T ss_dssp             TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred             CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence              3499998544332   357888999999998886543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=94.73  E-value=0.11  Score=49.23  Aligned_cols=40  Identities=18%  Similarity=0.105  Sum_probs=34.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHc---CCeEEEeeCCccH
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVAS---GCHVSATCGSKSI  211 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~---g~~vi~~~~~~~~  211 (364)
                      ...+.+|+|+||+|.+|..+++.+...   |.+|+++.+++..
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            356789999999999999999888777   8999999987653

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=94.73  E-value=0.11  Score=43.38  Aligned_cols=99  Identities=13%  Similarity=0.130  Sum_probs=64.0

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-H----HHHHcCCce---eeeCCChhHHHHhc---
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-D----RVLAAGAEQ---AVDYSSKDIELAIK---  235 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~~~~~i~---  235 (364)
                      .....++.+||-.| +| .|..+..+++..  +.+|+++..++.. +    .+.+.|...   ++..+..+......   
T Consensus        59 l~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~  136 (225)
T 3tr6_A           59 LVKLMQAKKVIDIG-TF-TGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAG  136 (225)
T ss_dssp             HHHHHTCSEEEEEC-CT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTT
T ss_pred             HHHhhCCCEEEEeC-Cc-chHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhcc
Confidence            34456788999998 34 588888999876  5799999776653 3    344455532   33333323333322   


Q ss_pred             --CCccEEEECCCCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          236 --GKFDAVLDTIGAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       236 --g~~D~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                        +++|+||-.....   ..+..+.+.|++||.++.-..
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~  175 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV  175 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence              3599998544432   357788899999999987543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=94.71  E-value=0.044  Score=49.54  Aligned_cols=74  Identities=19%  Similarity=0.261  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccHHHHHHc-CCceeeeCCChhHH-HHhcC----CccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSIDRVLAA-GAEQAVDYSSKDIE-LAIKG----KFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~~~~~~~-g~~~v~~~~~~~~~-~~i~g----~~D~vid~~g  246 (364)
                      .+.+|||+||+|.+|..+++.+...| .+|+++.+.........+ +.....|..+.+.. ..+.+    ++|+||.+.|
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~  124 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA  124 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCc
Confidence            35679999999999999999999899 899999876543211111 11111233333322 22322    4999999988


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus       125 ~  125 (357)
T 2x6t_A          125 C  125 (357)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.69  E-value=0.16  Score=42.50  Aligned_cols=98  Identities=17%  Similarity=0.241  Sum_probs=62.5

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc-eeeeCCChhHHHHhcCCccEEEE
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAVDYSSKDIELAIKGKFDAVLD  243 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~-~v~~~~~~~~~~~i~g~~D~vid  243 (364)
                      ..++++++||=.| +|..|..+..+++..+.+|+++..++.. +.    +...+.. .++..+...+.....+++|+|+-
T Consensus        51 ~~~~~~~~vLDlG-~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~  129 (230)
T 3evz_A           51 TFLRGGEVALEIG-TGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFS  129 (230)
T ss_dssp             TTCCSSCEEEEEC-CTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred             hhcCCCCEEEEcC-CCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEE
Confidence            4567899999998 5656888888887778899999776653 33    3444431 23332211111111135999985


Q ss_pred             CCCC-------------------------chhHHHHHhhccCCCEEEEEc
Q 017901          244 TIGA-------------------------PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       244 ~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      ...-                         ...+..+.+.|++||+++.+-
T Consensus       130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  179 (230)
T 3evz_A          130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL  179 (230)
T ss_dssp             CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence            4210                         235788889999999998864

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.68  E-value=0.1  Score=45.13  Aligned_cols=86  Identities=19%  Similarity=0.141  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET-  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~-  250 (364)
                      .| +++|.| .|.+|.+.+..+...|++|+...++.++  +++.+++..  ++    ++.+. .+ +|+|+.|++.... 
T Consensus       116 ~~-~v~iiG-~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~~----~~~~~-~~-~Divi~~tp~~~~~  185 (263)
T 2d5c_A          116 KG-PALVLG-AGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--AV----PLEKA-RE-ARLLVNATRVGLED  185 (263)
T ss_dssp             CS-CEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--EC----CGGGG-GG-CSEEEECSSTTTTC
T ss_pred             CC-eEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--hh----hHhhc-cC-CCEEEEccCCCCCC
Confidence            46 899999 7999999999999999988777766543  445566653  21    12222 34 9999999997611 


Q ss_pred             -H-H-HHHhhccCCCEEEEEcc
Q 017901          251 -E-R-LGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 -~-~-~~~~~l~~~G~~v~~g~  269 (364)
                       . . .....++++..++.++.
T Consensus       186 ~~~~~l~~~~l~~g~~viD~~~  207 (263)
T 2d5c_A          186 PSASPLPAELFPEEGAAVDLVY  207 (263)
T ss_dssp             TTCCSSCGGGSCSSSEEEESCC
T ss_pred             CCCCCCCHHHcCCCCEEEEeec
Confidence             0 1 11467788888877653

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=94.68  E-value=0.079  Score=47.10  Aligned_cols=83  Identities=22%  Similarity=0.177  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch----
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~----  249 (364)
                      .|.++.|.| .|.+|...++.++.+|.+|++..++.+...     +    .+  .++.+.+.. .|+|+-++....    
T Consensus       143 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----~----~~--~~l~ell~~-aDvV~l~~p~~~~t~~  209 (311)
T 2cuk_A          143 QGLTLGLVG-MGRIGQAVAKRALAFGMRVVYHARTPKPLP-----Y----PF--LSLEELLKE-ADVVSLHTPLTPETHR  209 (311)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----S----CB--CCHHHHHHH-CSEEEECCCCCTTTTT
T ss_pred             CCCEEEEEE-ECHHHHHHHHHHHHCCCEEEEECCCCcccc-----c----cc--CCHHHHHhh-CCEEEEeCCCChHHHh
Confidence            578899999 899999999999999999998876554321     1    11  123333334 899999877642    


Q ss_pred             hH-HHHHhhccCCCEEEEEcc
Q 017901          250 TE-RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~~-~~~~~~l~~~G~~v~~g~  269 (364)
                      .+ ...+..++++..++.++.
T Consensus       210 li~~~~l~~mk~ga~lin~sr  230 (311)
T 2cuk_A          210 LLNRERLFAMKRGAILLNTAR  230 (311)
T ss_dssp             CBCHHHHTTSCTTCEEEECSC
T ss_pred             hcCHHHHhhCCCCcEEEECCC
Confidence            12 246678899999988874

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=94.66  E-value=0.31  Score=43.48  Aligned_cols=136  Identities=12%  Similarity=-0.018  Sum_probs=79.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCC-ccH--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchh
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGS-KSI--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPET  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~-~~~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~  250 (364)
                      -++.|.| .|.+|...+..++.. +++++++++. .++  ..+.+.|...++.    ++.+.+. ..+|+|+.|+.....
T Consensus         6 ~rigiiG-~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~----~~~~ll~~~~~D~V~i~tp~~~h   80 (329)
T 3evn_A            6 VRYGVVS-TAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYD----KLEDMLADESIDVIYVATINQDH   80 (329)
T ss_dssp             EEEEEEB-CCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEES----CHHHHHTCTTCCEEEECSCGGGH
T ss_pred             eEEEEEe-chHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccC----CHHHHhcCCCCCEEEECCCcHHH
Confidence            3689999 788998777666554 5688888543 332  4556666643332    3344444 239999999998867


Q ss_pred             HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCc
Q 017901          251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKL  330 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  330 (364)
                      ...+..+++.|-. |.+..+..          ....    ....-......+++.+.-.+..+....+..+.+++++|.+
T Consensus        81 ~~~~~~al~aGk~-Vl~EKP~a----------~~~~----e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~g~i  145 (329)
T 3evn_A           81 YKVAKAALLAGKH-VLVEKPFT----------LTYD----QANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEI  145 (329)
T ss_dssp             HHHHHHHHHTTCE-EEEESSCC----------SSHH----HHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHCCCe-EEEccCCc----------CCHH----HHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHhCCCC
Confidence            7777778777654 45554411          0011    1111111223345555444433345678888899998877


Q ss_pred             e
Q 017901          331 K  331 (364)
Q Consensus       331 ~  331 (364)
                      -
T Consensus       146 G  146 (329)
T 3evn_A          146 G  146 (329)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=94.66  E-value=0.29  Score=45.08  Aligned_cols=107  Identities=14%  Similarity=0.136  Sum_probs=68.5

Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHH-----------HHcCC--ce--ee
Q 017901          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRV-----------LAAGA--EQ--AV  223 (364)
Q Consensus       161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~-----------~~~g~--~~--v~  223 (364)
                      ..+..+.....++++++|+=.|  ++.|.+++++|+..|+. |+++..++.. +.+           +..|.  ..  ++
T Consensus       160 ~~i~~il~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi  237 (438)
T 3uwp_A          160 DLVAQMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE  237 (438)
T ss_dssp             HHHHHHHHHHCCCTTCEEEEES--CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred             HHHHHHHHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence            3344445778899999999988  34799999999988985 9999776542 222           23343  22  23


Q ss_pred             eCC--ChhHHHHhcCCccEEEECCC--Cc---hhHHHHHhhccCCCEEEEEccC
Q 017901          224 DYS--SKDIELAIKGKFDAVLDTIG--AP---ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       224 ~~~--~~~~~~~i~g~~D~vid~~g--~~---~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ..+  +..+.+.+.. +|+||-..-  .+   ..+....+.|+|||++|+.-..
T Consensus       238 ~GD~~~lp~~d~~~~-aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f  290 (438)
T 3uwp_A          238 RGDFLSEEWRERIAN-TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPF  290 (438)
T ss_dssp             ECCTTSHHHHHHHHT-CSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred             ECcccCCccccccCC-ccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecc
Confidence            222  2233332234 999985321  11   2456778899999999987544

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=94.66  E-value=0.077  Score=46.14  Aligned_cols=98  Identities=15%  Similarity=0.126  Sum_probs=65.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHH----HHc-CCce--eeeCCChhHHHHhc-C
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRV----LAA-GAEQ--AVDYSSKDIELAIK-G  236 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~----~~~-g~~~--v~~~~~~~~~~~i~-g  236 (364)
                      ....++++++||-.| +| .|..+..+++..  +.+|+++..++.. +.+    ... |.+.  +...+   +.+... +
T Consensus       104 ~~~~~~~~~~VLD~G-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d---~~~~~~~~  178 (275)
T 1yb2_A          104 MRCGLRPGMDILEVG-VG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD---IADFISDQ  178 (275)
T ss_dssp             --CCCCTTCEEEEEC-CT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC---TTTCCCSC
T ss_pred             HHcCCCCcCEEEEec-CC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc---hhccCcCC
Confidence            556788999999998 44 688888888873  6799999776653 433    333 5332  22221   111111 3


Q ss_pred             CccEEEECCCCc-hhHHHHHhhccCCCEEEEEccC
Q 017901          237 KFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|+|+.....+ ..+..+.+.|++||+++.....
T Consensus       179 ~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  213 (275)
T 1yb2_A          179 MYDAVIADIPDPWNHVQKIASMMKPGSVATFYLPN  213 (275)
T ss_dssp             CEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred             CccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            499999866654 4788999999999999988643

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.65  E-value=0.14  Score=44.79  Aligned_cols=86  Identities=20%  Similarity=0.200  Sum_probs=60.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGL  255 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~  255 (364)
                      +|.|.| .|.+|...++.+...|.+|++..+++++ +.+.+.|+...     .+..+.+.+ .|+||-|+..+..+...+
T Consensus         3 ~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~~-advvi~~v~~~~~~~~v~   75 (287)
T 3pdu_A            3 TYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQA-----SSPAEVCAA-CDITIAMLADPAAAREVC   75 (287)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEEC-----SCHHHHHHH-CSEEEECCSSHHHHHHHH
T ss_pred             eEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHHc-CCEEEEEcCCHHHHHHHH
Confidence            588889 8999999998888889999999887665 66666665321     122333334 899999999863444433


Q ss_pred             -------hhccCCCEEEEEcc
Q 017901          256 -------NFLKRGGHYMTLHG  269 (364)
Q Consensus       256 -------~~l~~~G~~v~~g~  269 (364)
                             ..++++..++.++.
T Consensus        76 ~~~~~l~~~l~~g~~vv~~st   96 (287)
T 3pdu_A           76 FGANGVLEGIGGGRGYIDMST   96 (287)
T ss_dssp             HSTTCGGGTCCTTCEEEECSC
T ss_pred             cCchhhhhcccCCCEEEECCC
Confidence                   45667777777664

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=94.64  E-value=0.12  Score=49.35  Aligned_cols=76  Identities=22%  Similarity=0.314  Sum_probs=51.8

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc----H----HHHHHcCCce-e--eeCCChh-HHHHhc-CC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS----I----DRVLAAGAEQ-A--VDYSSKD-IELAIK-GK  237 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~----~----~~~~~~g~~~-v--~~~~~~~-~~~~i~-g~  237 (364)
                      ++++.++||+||+|++|..+++.+...|+ +|+.+.++..    .    +.+.+.|... +  .|..+.+ +...+. ++
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~  335 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP  335 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence            46789999999999999999999988899 5777777642    1    2234445432 2  2444432 333332 45


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|+||.+.|.
T Consensus       336 ld~VVh~AGv  345 (511)
T 2z5l_A          336 PNAVFHTAGI  345 (511)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999884

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=94.64  E-value=0.095  Score=46.82  Aligned_cols=71  Identities=23%  Similarity=0.286  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH----HHHHHcC---Cceee--eCCC-hhHHHHhcCCccEEEEC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----DRVLAAG---AEQAV--DYSS-KDIELAIKGKFDAVLDT  244 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~~~~g---~~~v~--~~~~-~~~~~~i~g~~D~vid~  244 (364)
                      +++|||+||+|.+|..+++.+...|.+|+++.++...    ..+..+.   .-.++  |..+ .++.+.+.+ +|+||.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAG-CDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTT-CSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcC-CCEEEEe
Confidence            6789999999999999999999999999988765431    1122221   11122  3333 234455556 9999997


Q ss_pred             CC
Q 017901          245 IG  246 (364)
Q Consensus       245 ~g  246 (364)
                      .+
T Consensus        88 A~   89 (338)
T 2rh8_A           88 AT   89 (338)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=94.64  E-value=0.3  Score=41.65  Aligned_cols=71  Identities=28%  Similarity=0.439  Sum_probs=51.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCC-ccHHHHHHcCCceeeeCCChhHHH-H----hc-CCccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIEL-A----IK-GKFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~-~----i~-g~~D~vid~~g~~  248 (364)
                      +|.|.|++|.+|...++.+... +.+++++.+. +..+.+...+++.++|++.++... .    +. | .++|+-++|-.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g-~~~VigTTG~~   80 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNG-IHAVVGTTGFT   80 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEECCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcC-CCEEEcCCCCC
Confidence            5899998899999999998766 8888887543 334434345788889887653222 2    22 6 99999999865

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=94.63  E-value=0.07  Score=47.75  Aligned_cols=70  Identities=23%  Similarity=0.173  Sum_probs=47.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHH-HHcCCcee-eeCCC-h-hHHHHhcCCccEEEECCCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV-LAAGAEQA-VDYSS-K-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~-~~~g~~~v-~~~~~-~-~~~~~i~g~~D~vid~~g~  247 (364)
                      +|||+||+|.+|..+++.+... |.+|+++.++... ..+ ...+...+ .|..+ . .+...+.+ +|+||.+.|.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~d~vih~A~~   77 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKK-CDVVLPLVAI   77 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHH-CSEEEECBCC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccC-CCEEEEcccc
Confidence            6999999999999999999887 8999999886543 211 11122211 23333 2 23344446 9999999774

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=94.61  E-value=0.069  Score=47.75  Aligned_cols=97  Identities=12%  Similarity=0.138  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc-CCce-eeeCCChh-HHHHhc-CCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA-GAEQ-AVDYSSKD-IELAIK-GKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~-g~~~-v~~~~~~~-~~~~i~-g~~D~vid~~g~  247 (364)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.++...  +.+.++ +... ..|..+.+ +.+.+. +++|+||.+.|.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            45789999999999999999998899999999876432  212111 1111 12334432 333333 239999999885


Q ss_pred             chh--------------HHHHHhhccC-C-CEEEEEccC
Q 017901          248 PET--------------ERLGLNFLKR-G-GHYMTLHGE  270 (364)
Q Consensus       248 ~~~--------------~~~~~~~l~~-~-G~~v~~g~~  270 (364)
                      ...              ....++.+.+ + +++|.++..
T Consensus       100 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~  138 (333)
T 2q1w_A          100 YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTA  138 (333)
T ss_dssp             CSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred             cCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcH
Confidence            311              1233343332 2 689888754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	364
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-21
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	2e-20
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	8e-20
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	1e-19
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	3e-18
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	5e-18
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-17
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-16
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-15
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	1e-15
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-15
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	2e-15
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	3e-15
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-13
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	7e-13
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	2e-12
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	4e-12
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-11
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	6e-11
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	1e-10
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-10
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-10
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-10
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-10
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	3e-10
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	5e-10
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	8e-10
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	4e-09
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	6e-09
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	8e-09
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-08
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	1e-08
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	2e-08
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	3e-08
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	5e-08
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	5e-08
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-07
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-07
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	9e-07
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	9e-06
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	1e-05
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	2e-05
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	3e-05
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-05
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	3e-05
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	5e-05
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	7e-05
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-04
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	2e-04
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	3e-04
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-04
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	5e-04
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	8e-04

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 87.6 bits (216), Expect = 2e-21
 Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 9/158 (5%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           ++ +A V+ +        V+  + + DL   +VLVR    S+N  D            + 
Sbjct: 2   SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLAS----IPDGKI 56

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAV--RGTYADYAVLSEDELTPKP 144
           +        I      V +       G EV    +   V   G Y++YA L  + L P P
Sbjct: 57  VKTYPFVPGIDLAGVVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLP 116

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG 182
             +    A  I  A L           +  G+ ++ L 
Sbjct: 117 KGLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA 152

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (208), Expect = 2e-20
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 5/152 (3%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAV +  FGGPEVL++R ++ VP  K ++VL++  A  +NP++T +RSG      +PLLP
Sbjct: 4   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGT--YSRKPLLP 61

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
              G D++G + AVG +  +   G  VF     + + G YA+YA+ ++  +   P  +  
Sbjct: 62  YTPGSDVAGVIEAVGDNASAFKKGDRVF---TSSTISGGYAEYALAADHTVYKLPEKLKP 118

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVL 181
              S  P   +            + G+ +L+L
Sbjct: 119 VIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 83.4 bits (205), Expect = 8e-20
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 4/162 (2%)

Query: 26  TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           +T  +A+   +      + V+  +   DL  + VL++     IN  D       G  + E
Sbjct: 1   STLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVRE 59

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
              PLILG D +G V +      +              +  G  ++YA +  D L P P 
Sbjct: 60  Y--PLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQ 117

Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187
           +++  +A       +               + +L     G V
Sbjct: 118 NLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRV 158

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 81.9 bits (201), Expect = 1e-19
 Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 3/137 (2%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A++L +  G  +  V+  ++   L   +V V     S+N  D    +G G+ I     P
Sbjct: 2   QALLLEQQDGKTLASVQ-TLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNF--P 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
           +I G D +G V               + G        G  A+ A +  D L   P     
Sbjct: 59  MIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAA 118

Query: 150 ADASAIPFAALTAWRAL 166
            + S             
Sbjct: 119 KEISLSEAPNFAEAIIN 135

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 79.3 bits (194), Expect = 3e-18
 Identities = 36/177 (20%), Positives = 55/177 (31%), Gaps = 29/177 (16%)

Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
           + VL        L +     +P+ K +EVL++   V I   D         + F    P+
Sbjct: 4   SAVLY---KQNDLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPM 59

Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------------ 126
           ++G + SG V  VG +V+ L  G  V         R                        
Sbjct: 60  VIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDD 119

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG 183
           G  A Y V + D     P +          F       A + AAR      + V+  
Sbjct: 120 GNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFE-AARKKADNTIKVMIS 175

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 78.8 bits (193), Expect = 5e-18
 Identities = 37/181 (20%), Positives = 60/181 (33%), Gaps = 31/181 (17%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           +  + +A V+  +G P  +E    V+VP   P +VLV+  A  +   D     G      
Sbjct: 2   LPQTMKAAVVHAYGAPLRIE---EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKP 58

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRG----------------- 127
               P I G +  G VAAVG+ V  +  G  V      TA                    
Sbjct: 59  PL--PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN 116

Query: 128 -------TYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
                   YA+Y +   + +   P +V                  ++      EG+ +L 
Sbjct: 117 TGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMRAGQI--EGRIVLE 174

Query: 181 L 181
           +
Sbjct: 175 M 175

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 2e-17
 Identities = 30/197 (15%), Positives = 58/197 (29%), Gaps = 50/197 (25%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V    G P  +E    +EV   K +EV ++  A ++   D    SG       P++
Sbjct: 7   CKAAVAWEAGKPLSIE---EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVI 63

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR---------------------- 126
               G   +G V +VG  V  L  G  V     P                          
Sbjct: 64  L---GHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 127 ----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T+++Y V+++  +      +   +      +     +
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINK 180

Query: 165 ALKCAARMSEGQRLLVL 181
           A +        + ++ +
Sbjct: 181 AFELMHSGKSIRTVVKI 197

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 75.7 bits (185), Expect = 1e-16
 Identities = 29/197 (14%), Positives = 55/197 (27%), Gaps = 50/197 (25%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V      P V+E    +EV     NE+ ++  A  +   D             P++
Sbjct: 9   CKAAVAWEANKPLVIE---EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVV 65

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGA----------------------------- 119
               G + +G V +VG  V     G++V                                
Sbjct: 66  L---GHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 120 ---------------LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                          +       T++ Y V+++  +     SV   +         +   
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVND 182

Query: 165 ALKCAARMSEGQRLLVL 181
           A+         + +L L
Sbjct: 183 AIDLMKHGKCIRTVLSL 199

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 1e-15
 Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 33/181 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            ++V+    GP  L +  N  +P+  PNEVL+R  +V I   D           F    P
Sbjct: 9   LSLVVH---GPGDLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPT------------------------AV 125
           ++LG + SG V  VG+SV+ L  G  V                                 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFA-ALTAWRALKCAARMSEGQRLLVLGGG 184
            G    +   +       P +V        P   AL A+       +   G ++++    
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFE----TFKKGLGLKIMLKCDP 180

Query: 185 G 185
            
Sbjct: 181 S 181

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 70.6 bits (172), Expect = 1e-15
 Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 22/152 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL R GGP  L    ++  P+ +  EV++R  AV +N  D  MR G   +   P   
Sbjct: 2   KAWVLKRLGGPLELV---DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP--- 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
                        +        V    + AL P   +G  A+   + +  L P P     
Sbjct: 56  -----------PFIPGMEVVGVVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGRPV 101

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVL 181
                    A  A+RAL        G+ ++ L
Sbjct: 102 VGPVFPFAEAEAAFRALLDRGHT--GKVVVRL 131

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 71.5 bits (174), Expect = 2e-15
 Identities = 38/180 (21%), Positives = 61/180 (33%), Gaps = 34/180 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-----GRSIF 84
           RAV L   G P  L+    + VP  K  +VL++  A  +   D  MR G           
Sbjct: 2   RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
              LP+ LG +I+G++  VG  V   + G  V                            
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 123 -TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL-TAWRALKCAARMSEGQRLLV 180
                G YA+Y ++   +   K   V       +       A   L+    +  G+++L+
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAI--GRQVLI 176

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 71.0 bits (172), Expect = 2e-15
 Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 10/176 (5%)

Query: 27  TSCRAVVLPRFGGP-EVLEVRP-NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
            + +AV+  + G P +VL  +   ++  +L PNEV+V+T    +NP D     G   S  
Sbjct: 2   ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP 61

Query: 85  EPLLPLILGRD----ISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140
                           +  +  V     +++  +     +      GT+  +A+ ++D+ 
Sbjct: 62  AKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDF 121

Query: 141 TPKPVSVTHADASAIPFAALTAWRAL-KCAARMSEGQRLLVLGGG-GAVGFAAVQF 194
              P               LT  +++            L   G      G   + +
Sbjct: 122 IKLPNPAQSKA--NGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 175

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 70.1 bits (170), Expect = 3e-15
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
             +   + GGPEVL+        D   NE+ V  +A+ IN +DT +RSG       P LP
Sbjct: 2   TRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGL---YPPPSLP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL--TPKPVSV 147
             LG + +G V+ VG+ V+ +  G  V  A       G Y+    +  D+    P  + V
Sbjct: 58  SGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSA---LGAYSSVHNIIADKAAILPAAIKV 114

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLV 180
             A+    P         +   +R ++G  LL+
Sbjct: 115 DVAEQQKYPLKDAQRAHEIL-ESRATQGSSLLI 146

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 66.8 bits (162), Expect = 1e-13
 Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 58/202 (28%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A +  + G P  +E    +EV   K  EV ++  A  + P D        +++F    
Sbjct: 9   CKAAIAWKTGSPLCIE---EIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPV-- 63

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFG------------------------------ 118
             +LG + +G V +VG  V +   G +V                                
Sbjct: 64  --VLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 119 ------------------ALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL 160
                             +++      +++ Y V+SE  L                    
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFE 181

Query: 161 TAWRALKCAARMSEGQRLLVLG 182
           +   A+     M EG+ +  + 
Sbjct: 182 SINDAI---DLMKEGKSIRTIL 200

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 64.3 bits (155), Expect = 7e-13
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 5/127 (3%)

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           ++   A+A     LT +  L+    +   ++ L     G VG  A Q++ A G  +  T 
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 60

Query: 207 GSK-SIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG 261
           G+       L AGA Q ++Y  +D+   +K    GK   V+      +T    L+ L+R 
Sbjct: 61  GTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRR 120

Query: 262 GHYMTLH 268
           G  ++  
Sbjct: 121 GLMVSFG 127

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 63.1 bits (152), Expect = 2e-12
 Identities = 30/199 (15%), Positives = 55/199 (27%), Gaps = 26/199 (13%)

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG-GGAVGFAAVQFSVASGCHVSAT 205
           +T    + I    LTA+  L    +++ G+   +  G   AVG  A Q       +  + 
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 206 CGSKSIDRVL-----AAGAEQAVDYSS----------KDIELAIKGKFDAVLDTIGAPET 250
              +     +       GA Q +              K+      G+    L+ +G   +
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS 120

Query: 251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY 310
                  L   G  +T  G +                    + K   +   +  +     
Sbjct: 121 TG-IARKLNNNGLMLTYGGMSFQPVTIPTSL---------YIFKNFTSAGFWVTELLKNN 170

Query: 311 MRADAEGLEEIRRLSETGK 329
                  L +I    E GK
Sbjct: 171 KELKTSTLNQIIAWYEEGK 189

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 61.5 bits (148), Expect = 4e-12
 Identities = 41/177 (23%), Positives = 60/177 (33%), Gaps = 33/177 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+ +F  P  ++    VE P +   EVLVR +A  +   D     G      +   P
Sbjct: 2   KAAVVEQFKEPLKIK---EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKL--P 56

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR----------------------- 126
           LI G +  G V  VG  V  L VG  V      +A                         
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116

Query: 127 -GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG 182
            G YA+Y   + D +   P +    +   +        R LK       G+ +L L 
Sbjct: 117 DGGYAEYCRAAADYVVKIPDNTI-IEVQPLEKINEVFDRMLKGQIN---GRVVLTLE 169

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 7/128 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS- 210
              I     T + +    A++++G    V G GG      +    A    +     +K  
Sbjct: 6   VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 65

Query: 211 IDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
             +    GA + V+           +     G  D   + IG  +T    L+  +     
Sbjct: 66  FAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGV 125

Query: 265 MTLHGETA 272
             + G   
Sbjct: 126 SVIVGVPP 133

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 59.2 bits (142), Expect = 6e-11
 Identities = 34/193 (17%), Positives = 57/193 (29%), Gaps = 28/193 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            A V P  G    L+    +++   + +EVLV+  A  +   D  +R       +   LP
Sbjct: 5   IAAVTPCKGADFELQ---ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK----YPVPLP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFG--------------------ALHPTAVRGTY 129
            +LG + SG + A+G +V  L VG  V                              G  
Sbjct: 58  AVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGAD 117

Query: 130 ADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF 189
           ++                  A +S   +A       +K        Q L+       +  
Sbjct: 118 SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQ-LVKFYAFDEINQ 176

Query: 190 AAVQFSVASGCHV 202
           AA+          
Sbjct: 177 AAIDSRKGITLKP 189

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 58.1 bits (139), Expect = 1e-10
 Identities = 35/183 (19%), Positives = 59/183 (32%), Gaps = 13/183 (7%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI 211
              I    LTA+  L     +  G+ +LV    GAVG    Q +   GC V    GS   
Sbjct: 7   LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK 66

Query: 212 DRVLAAGAEQA------VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
              L      A      V+   + ++ A    +D   D +G        L+ +K  G   
Sbjct: 67  IAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNT-VLSQMKDFGKIA 125

Query: 266 TLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLS 325
            + G  +       L  G    + +  + R++     G            + L ++ +  
Sbjct: 126 -ICGAISVYNRMDQLPPGPSPESIIYKQLRIE-----GFIVYRWQGDVREKALRDLMKWV 179

Query: 326 ETG 328
             G
Sbjct: 180 LEG 182

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 57.7 bits (138), Expect = 1e-10
 Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 7/125 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS- 210
              +     T + A    A++  G    V G GG      +   VA    +     +K  
Sbjct: 6   VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 65

Query: 211 IDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
             R    GA + ++           +     G  D   + IG  +  R  L    +G   
Sbjct: 66  FARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV 125

Query: 265 MTLHG 269
             + G
Sbjct: 126 SVVVG 130

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 57.7 bits (138), Expect = 1e-10
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 1/116 (0%)

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
           A  + +  A +T +  L+   +   G+++ V+G GG                V+ T    
Sbjct: 7   AAVAPLLCAGITTYSPLR-HWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEA 65

Query: 210 SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
             +   A GA++ V+  + D   A    FD +L+T+ AP         LKR G   
Sbjct: 66  KREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMT 121

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 57.3 bits (137), Expect = 2e-10
 Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 7/125 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS- 210
              +     T + A    A++  G    V G G     A +    A    + A   +   
Sbjct: 6   VCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDK 65

Query: 211 IDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
            ++    GA   V+ +         +     G  D  L+ +G     R  L    +G   
Sbjct: 66  FEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGV 125

Query: 265 MTLHG 269
             L G
Sbjct: 126 SVLVG 130

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 57.0 bits (136), Expect = 2e-10
 Identities = 31/175 (17%), Positives = 55/175 (31%), Gaps = 29/175 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           +A  L  +  P  +E   +V+ P L+   +V+VR     +   D  +  G    + +P L
Sbjct: 1   KAARLHEYNKPLRIE---DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP-----------------------TAV 125
           P  LG +  G +  V   V  L  G  V                               +
Sbjct: 58  PYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNI 117

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
            G +A++   S   +   P  V                  L+    +  G+ +L+
Sbjct: 118 DGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVL--GRAVLI 170

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 56.8 bits (136), Expect = 3e-10
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 45/187 (24%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
             A+VL +F  P V +     E+ D+    +LV   +  +   D  M  G    +  P++
Sbjct: 5   AHAMVLEKFNQPLVYK---EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPII 61

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------ 124
               G     EV      +    +        +                           
Sbjct: 62  LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG 121

Query: 125 ----------VRGTYADYAVLS-EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS 173
                     +RG Y+ + VL  E ++      +TH     +P     A +AL+      
Sbjct: 122 INRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITH----RLPLK--EANKALE-LMESR 174

Query: 174 EGQRLLV 180
           E  ++++
Sbjct: 175 EALKVIL 181

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 55.7 bits (133), Expect = 5e-10
 Identities = 35/186 (18%), Positives = 61/186 (32%), Gaps = 26/186 (13%)

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
            + + +  A +TA+RA+K AAR       + + G G +G  AVQ               K
Sbjct: 7   VEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVK 66

Query: 210 SIDRVLAAGAEQA--VDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGH 263
                LA        VD     ++  ++       +  +D +G+  T       L R G 
Sbjct: 67  EEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGR 126

Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
            +             G    L   T  ++   +        + S +    +   L E+  
Sbjct: 127 LII-----------VGYGGELRFPTIRVISSEVS------FEGSLVGNYVE---LHELVT 166

Query: 324 LSETGK 329
           L+  GK
Sbjct: 167 LALQGK 172

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 55.4 bits (132), Expect = 8e-10
 Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 21/193 (10%)

Query: 151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
           +A+    A LTAW +L    R+S G+R+L+    G VG AAV  +   G  +  T GS +
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61

Query: 211 IDRVLAAGA------EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
              +L+          ++VD++ + +EL      D VL+++     +R     L  GG +
Sbjct: 62  KREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGV-QILAPGGRF 120

Query: 265 MTLHGETAALADHYGLALGLPIATTVL-LKKRMQTWYSYGIDYSYIYMRAD-AEGLEEIR 322
           +             G       A+  L    +  ++    +D +     A   + L+ I 
Sbjct: 121 IE-----------LGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHIL 169

Query: 323 RLSETGKLK-IPV 334
           +    GKL+ +PV
Sbjct: 170 QHVADGKLEVLPV 182

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 53.3 bits (127), Expect = 4e-09
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 7/126 (5%)

Query: 148 THADASAIPFAALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
           T  +A AI  A  TA      L+      E   +LV G  G VG  AV      G  V A
Sbjct: 2   TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEA 61

Query: 205 TCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK---GKFDAVLDTIGAPETERLGLNFLKR 260
           + G +   D +   GA++ +       E        ++ A +D +G      +       
Sbjct: 62  STGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYG 121

Query: 261 GGHYMT 266
           G   ++
Sbjct: 122 GAVAVS 127

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 53.3 bits (127), Expect = 6e-09
 Identities = 37/203 (18%), Positives = 61/203 (30%), Gaps = 61/203 (30%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A VL     P  +E    VEV   K +EV ++  A  I   D  + SG   +      
Sbjct: 9   CKAAVLWEEKKPFSIE---EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPV-- 63

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR---------------------- 126
             I G + +G V ++G  V ++  G +V     P   +                      
Sbjct: 64  --IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121

Query: 127 ----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T++ Y V+ E  +            +A     L    
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID--------AAFALDPLIT-- 171

Query: 165 ALKCAARMSEGQRLLVLGGGGAV 187
            +    +++EG  LL  G     
Sbjct: 172 HVLPFEKINEGFDLLRSGESIRT 194

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.5 bits (125), Expect = 8e-09
 Identities = 22/176 (12%), Positives = 51/176 (28%), Gaps = 40/176 (22%)

Query: 37  FGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDI 96
           +  P+  +  P         +++ ++  A  +   D    +G+        +PL++G +I
Sbjct: 18  WKNPKKTKYDP----KPFYDHDIDIKIEACGVCGSDIHCAAGH---WGNMKMPLVVGHEI 70

Query: 97  SGEVAAVGA--------------------------------SVRSLTVGQEVFGALHPTA 124
            G+V  +G                                    +  V            
Sbjct: 71  VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYV 130

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
            +G YA+Y  + E  + P P ++              A+  ++    +     L+ 
Sbjct: 131 SQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERME-KGDVRYRFTLVG 185

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 24/127 (18%), Positives = 40/127 (31%), Gaps = 7/127 (5%)

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
            ++  I     T + A    A+++ G    V G GG    A V    A    +      K
Sbjct: 3   LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHK 62

Query: 210 S-IDRVLAAGAEQAVDYSSKDIELAIK------GKFDAVLDTIGAPETERLGLNFLKRGG 262
               + +  GA + ++    D  +         G  D  ++  G  ET    L     G 
Sbjct: 63  DKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGS 122

Query: 263 HYMTLHG 269
               + G
Sbjct: 123 GVTVVLG 129

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 49.2 bits (117), Expect = 1e-08
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 148 THADASAIPFAALTAWRA---LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
               A  I  A  TA      L+ A    +   ++V G  G VG  AV      G  V A
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61

Query: 205 TCGSKS-IDRVLAAGA 219
             G +S  + + + GA
Sbjct: 62  VSGRESTHEYLKSLGA 77

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 51.8 bits (123), Expect = 2e-08
 Identities = 35/204 (17%), Positives = 60/204 (29%), Gaps = 61/204 (29%)

Query: 26  TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
             +C+A V      P  LE    + V   K +EV ++  A  I   D+ +      S F 
Sbjct: 6   DITCKAAVAWEPHKPLSLE---TITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFP 62

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------- 126
                ILG +  G V ++GA V  +  G +V     P                       
Sbjct: 63  V----ILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA 118

Query: 127 -------------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
                                     T+ +Y V+++  +              I    L 
Sbjct: 119 KTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID--------PKINVNFLV 170

Query: 162 AWRALKCAARMSEGQRLLVLGGGG 185
           + +      ++++   LL  G G 
Sbjct: 171 STKL--TLDQINKAFELLSSGQGV 192

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 51.4 bits (122), Expect = 3e-08
 Identities = 26/208 (12%), Positives = 56/208 (26%), Gaps = 48/208 (23%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-------PNEVLVRTRAVSINPLDTRMRSGYGRS 82
           R VV   + G   +EV+  ++ P ++        + V+++  + +I   D  M  G   +
Sbjct: 3   RGVV---YLGSGKVEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 58

Query: 83  IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV-------------------------- 116
               +L   +  ++  +   V        V                              
Sbjct: 59  QVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARA 118

Query: 117 ---FGALHPTAVRGTYADYAVL--SEDELTPKPVSVTHADASAIPFAALTAWRALKCAAR 171
              +G +      G  A+Y ++  ++  L   P      +   I         +L   A 
Sbjct: 119 GGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLD-DAP 177

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASG 199
              G+        G      +       
Sbjct: 178 RGYGE-----FDAGVPKKFVIDPHKTFS 200

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 50.3 bits (119), Expect = 5e-08
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 7/120 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS--K 209
              +     T   A   A +++     +  G G  VG +A+  +   G  +         
Sbjct: 6   LGPLGCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIAVDIVES 64

Query: 210 SIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
            ++     GA   ++  ++D   AIK    G  +  L++ G+PE  + G++ L   G   
Sbjct: 65  RLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIA 124

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.0 bits (118), Expect = 5e-08
 Identities = 34/186 (18%), Positives = 61/186 (32%), Gaps = 14/186 (7%)

Query: 153 SAIPFAALTAWRALKCAARMSEG--QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
            AI    LT+   ++    +S G  Q ++V G  GA G  A Q     GC          
Sbjct: 7   GAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ 66

Query: 211 -------IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
                   +    A         ++ +  A  G  D   D +G   +  +     +    
Sbjct: 67  EKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNEN--S 124

Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
           ++ L G+ +           LP A   + K+R  T   + +     Y      G+ ++ +
Sbjct: 125 HIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTV---LNYKDKFEPGILQLSQ 181

Query: 324 LSETGK 329
             + GK
Sbjct: 182 WFKEGK 187

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 48.8 bits (115), Expect = 1e-07
 Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 11/123 (8%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-- 209
            +    +  TA+ A         G+ +++ G G  +G   V  + + G            
Sbjct: 6   LAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGP-LGLFGVVIARSLGAENVIVIAGSPN 64

Query: 210 --------SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
                     D  L        +     +++      D +L+  G       G   L+RG
Sbjct: 65  RLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG 124

Query: 262 GHY 264
           G Y
Sbjct: 125 GFY 127

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 48.4 bits (114), Expect = 2e-07
 Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 9/139 (6%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS--K 209
              I     + + A    A+++ G    V G G  VG +A+     +G           +
Sbjct: 6   VCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGC-VGLSAIIGCKIAGASRIIAIDINGE 64

Query: 210 SIDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
              +  A GA   ++    D      I     G  D  LD  G  +T +  ++    G  
Sbjct: 65  KFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWG 124

Query: 264 YMTLHGETAALADHYGLAL 282
             T+ G          + +
Sbjct: 125 SCTVVGAKVDEMTIPTVDV 143

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 46.1 bits (108), Expect = 9e-07
 Identities = 23/103 (22%), Positives = 35/103 (33%), Gaps = 7/103 (6%)

Query: 158 AALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRV 214
           A  TA      L+      E   +LV G  G VG  AV      G  V A+ G++     
Sbjct: 4   AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY 63

Query: 215 LAAGAEQA----VDYSSKDIELAIKGKFDAVLDTIGAPETERL 253
           L            D     ++   K ++   +D +G  +   L
Sbjct: 64  LKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASL 106

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 43.3 bits (101), Expect = 9e-06
 Identities = 38/179 (21%), Positives = 57/179 (31%), Gaps = 18/179 (10%)

Query: 148 THADASAIPFAALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
               A  I  A  TA     AL+ A    +   ++V G  G VG  AV      G  V A
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61

Query: 205 TCGSKSIDRVLAAGAEQAVDYSSKDIELAI--KGKFDAVLDTIGAPETERLGLNFLKRGG 262
             G +S    L +     V    +  E     K  +   +DT+G           L +  
Sbjct: 62  VSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLA----KVLAQMN 117

Query: 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEI 321
           +        AA     G  L   +   +L   R+Q     G+D         A+  + +
Sbjct: 118 YGGC----VAACGLAGGFTLPTTVMPFILRNVRLQ-----GVDSVMTPPERRAQAWQRL 167

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (100), Expect = 1e-05
 Identities = 22/183 (12%), Positives = 52/183 (28%), Gaps = 23/183 (12%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI 211
           A+ +    LT +  L        G+++ ++G GG      +            +  S+  
Sbjct: 6   AAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR 64

Query: 212 DRVLAAGAEQAVDYSSKDIELAIKGKFDA---VLDTIGAPETERLGLNFLKRGGHYMTLH 268
           +  +  GA+  +    +               V  +        +    +K GG  ++  
Sbjct: 65  EDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVS-- 122

Query: 269 GETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETG 328
                            ++      K +       I YS +    +   L ++ +L    
Sbjct: 123 --------ISIPEQHEMLSLKPYGLKAVS------ISYSALGSIKE---LNQLLKLVSEK 165

Query: 329 KLK 331
            +K
Sbjct: 166 DIK 168

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 42.4 bits (98), Expect = 2e-05
 Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 27/189 (14%)

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGG--GGAVGFAAVQFSVASGCHVSAT 205
              +A+ +  + +T +RA++  A +   + LLV+G   G       +  +V+    +   
Sbjct: 2   NAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60

Query: 206 CGSKSIDRVLAAGAEQAVDYSSKD-----IELAIKGKFDAVLDTIGAPETERLGLNFLKR 260
              ++++    AGA+  ++ S +D       +      DAV+D   + +T  +    L +
Sbjct: 61  VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 120

Query: 261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE 320
            G Y+                  L     ++    +Q         S +  ++D      
Sbjct: 121 QGKYVM----------VGLFGADLHYHAPLITLSEIQ------FVGSLVGNQSD---FLG 161

Query: 321 IRRLSETGK 329
           I RL+E GK
Sbjct: 162 IMRLAEAGK 170

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 3e-05
 Identities = 39/182 (21%), Positives = 64/182 (35%), Gaps = 20/182 (10%)

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
                +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  +  T G
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 208 SKSIDRVLAAGAEQAVDYSS-----KDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           ++   +++       V           I+  +  K   ++  + A       L+ L  GG
Sbjct: 62  TEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGG 121

Query: 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ----TWYSYGIDYSYIYMRADAEGL 318
             +             G    + I     + K       T +S   +    Y  A   G+
Sbjct: 122 RVIV-----------VGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGM 170

Query: 319 EE 320
           E 
Sbjct: 171 EI 172

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 3e-05
 Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 9/126 (7%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS--K 209
              I     T + A     ++  G   +V G GG VG + +    ++G            
Sbjct: 7   VCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGG-VGLSVIMGCKSAGASRIIGIDLNKD 65

Query: 210 SIDRVLAAGAEQAVDYSSKDIELAIKGK------FDAVLDTIGAPETERLGLNFLKRGGH 263
             ++ +A GA + +        ++               + IG  ET    L        
Sbjct: 66  KFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYG 125

Query: 264 YMTLHG 269
              + G
Sbjct: 126 TSVVVG 131

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (97), Expect = 3e-05
 Identities = 24/161 (14%), Positives = 42/161 (26%), Gaps = 16/161 (9%)

Query: 30  RAVVL---PRFGG---PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI 83
           + VVL   P   G    E   V     +  L   +V VRT  +S++P      +    + 
Sbjct: 6   QRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTD 65

Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
           +     L    D  G      +  + L  G  V            +   A+L  + L   
Sbjct: 66  YLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFY------WPWQTKAILDGNGLEKV 119

Query: 144 PVSVTHADASAIP----FAALTAWRALKCAARMSEGQRLLV 180
              +                +               Q + +
Sbjct: 120 DPQLVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCI 160

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 41.1 bits (95), Expect = 5e-05
 Identities = 31/175 (17%), Positives = 45/175 (25%), Gaps = 40/175 (22%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV       P  LE   ++   +  PN+V +      +   D             P +P
Sbjct: 2   KAVGAYSAKQP--LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV--------------------------------F 117
                +I G V AVG  V     G  V                                 
Sbjct: 59  GH---EIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSP 115

Query: 118 GALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD-ASAIPFAALTAWRA-LKCAA 170
               P    G Y+   V+ E  +    V+      A  I  A     R  +K   
Sbjct: 116 TPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKYRF 170

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 21/135 (15%)

Query: 30  RAVVLP-RFGG---PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           ++  L   F G       E++  VE+P LK  EVL+    +S++P           S   
Sbjct: 5   KSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYM------RIASKRL 57

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
               +++G+        V +   +   G  V         +  +  + +     L     
Sbjct: 58  KEGAVMMGQ---QVARVVESKNSAFPAGSIVLA-------QSGWTTHFISDGKGLEKLLT 107

Query: 146 SVTHADASAIPFAAL 160
                          
Sbjct: 108 EWPDKKIQYHEHVTK 122

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 23/186 (12%)

Query: 151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
           +A  I     T +   +  A +  G  ++V+G G  VG   +  +   G       GS+ 
Sbjct: 5   NAVMITDMMTTGFHGAE-LADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRP 62

Query: 211 IDRVLAAGAEQAVDYSSKD-------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
           I    A         + K+       ++L      D V+   G  ET    +  +K GG 
Sbjct: 63  ICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGI 122

Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
              +     +     G AL +P                                 E +R 
Sbjct: 123 ISNI-NYHGS-----GDALLIPRVEWGCGMAHKTIKGG--------LCPGGRLRAERLRD 168

Query: 324 LSETGK 329
           +    +
Sbjct: 169 MVVYNR 174

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.7 bits (91), Expect = 2e-04
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           V  A+ + I  A +T ++ LK       GQ + +  G G +G  AVQ++ A G HV+A  
Sbjct: 1   VEFAEIAPILCAGVTVYKGLK-QTNARPGQWVAI-SGIGGLGHVAVQYARAMGLHVAAID 58

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 28/191 (14%), Positives = 50/191 (26%), Gaps = 46/191 (24%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +   +        +E     E P     + +VR  AVS    D            + ++ 
Sbjct: 2   KGFAMLGINKLGWIEK----ERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMIL 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR----------------------- 126
              G +  GEV  VG+ V+    G  V         R                       
Sbjct: 58  ---GHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114

Query: 127 ---GTYADYAVLSEDE--LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL 181
              G + +Y  +++ +  L   P  V  +      +                  + LL++
Sbjct: 115 FKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYHGFDHI-----------EEALLLM 163

Query: 182 GGGGAVGFAAV 192
                    AV
Sbjct: 164 KDKPKDLIKAV 174

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 21/105 (20%), Positives = 31/105 (29%), Gaps = 9/105 (8%)

Query: 151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
           D + +     T +     A  +  G  + V G G  VG AA   +   G  V        
Sbjct: 3   DLTCLSDILPTGYHGAVTA-GVGPGSTVYVAGAGP-VGLAAAASARLLGAAVVIVGDLNP 60

Query: 211 IDRVLA--AGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAP 248
                A   G E A       +   I       + D  +D +G  
Sbjct: 61  ARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFE 105

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 38.1 bits (87), Expect = 5e-04
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
           ++  +A+A P + LTA+ ALK  A+   G+++LV
Sbjct: 1   LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLV 33

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 37.8 bits (86), Expect = 8e-04
 Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 27/189 (14%)

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +  +A+ I  A +T ++ALK       G+ + +  G G +G  AVQ++ A G +V A   
Sbjct: 2   SFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAI-YGIGGLGHVAVQYAKAMGLNVVAVDI 59

Query: 208 SKS-----IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
                    +           + ++K ++  + G   AV+  +  P  +    N ++RGG
Sbjct: 60  GDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQS-AYNSIRRGG 118

Query: 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIR 322
             +                  +PI     +   ++      I  S +  R D   L+E  
Sbjct: 119 ACV----------LVGLPPEEMPIPIFDTVLNGIK------IIGSIVGTRKD---LQEAL 159

Query: 323 RLSETGKLK 331
           + +  GK+K
Sbjct: 160 QFAAEGKVK 168

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	364
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.98
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.97
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.95
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.93
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.92
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.91
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.91
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.91
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.91
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.9
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.9
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.89
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.89
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.89
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.88
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.88
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.87
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.87
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.87
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.86
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.84
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.83
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.83
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.83
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.79
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.74
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.69
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.48
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.84
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.69
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.64
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.61
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.6
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.6
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.56
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.51
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.51
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.47
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.45
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.44
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.37
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.36
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.35
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.33
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.32
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.3
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.29
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.27
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.26
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.25
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.23
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.23
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.19
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.19
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.19
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.18
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.18
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.14
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.14
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.14
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.14
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.11
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.11
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.09
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.09
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.08
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.05
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.04
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.04
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.02
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.02
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.01
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.0
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.99
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.99
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.97
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.97
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.96
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.96
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.96
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.92
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.91
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.91
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.9
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.88
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.87
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.86
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.83
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.8
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.76
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.75
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.74
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.73
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.71
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.68
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.6
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.58
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.56
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.56
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.46
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.46
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.44
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.41
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.4
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.35
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.32
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.29
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.24
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.21
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.17
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.15
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.13
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.06
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.06
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.97
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.94
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.85
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.84
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.83
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	95.71
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.66
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.63
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.62
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.61
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.57
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.53
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.5
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.47
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.44
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.4
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.37
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	95.29
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.21
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.16
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.09
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.06
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.03
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.97
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.95
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.94
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.92
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.88
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.86
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	94.76
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	94.74
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	94.73
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.73
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.66
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.62
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.58
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	94.53
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.51
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.46
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.44
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.43
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.4
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.4
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.2
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	94.12
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.12
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.03
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.92
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.88
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	93.88
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.83
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	93.82
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.8
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	93.79
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.78
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	93.77
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	93.73
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.65
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.63
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	93.55
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.52
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	93.5
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.44
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	93.44
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.44
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.43
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.42
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	93.41
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.38
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.38
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	93.16
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.16
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.09
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.04
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	92.98
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.94
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	92.9
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.82
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.8
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.78
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.71
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.69
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	92.61
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.59
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	92.44
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	92.35
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.33
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.33
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.27
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.26
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	92.25
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.16
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.12
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.05
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.03
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	91.81
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	91.78
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	91.78
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.77
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	91.73
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	91.72
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	91.65
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.46
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.43
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	91.18
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	91.03
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.99
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.93
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.86
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.72
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.69
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.68
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	90.47
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	90.26
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.25
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	90.25
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	90.18
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.0
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.92
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.84
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	89.68
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.64
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.64
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	89.53
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	89.41
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	89.12
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.99
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	88.94
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	88.91
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	88.9
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	88.65
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	88.63
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.45
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	88.42
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	88.38
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	88.38
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	88.21
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.18
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	88.05
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.02
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	87.99
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	87.9
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	87.88
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	87.84
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	87.63
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.6
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	87.56
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.49
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	87.39
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.35
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	86.97
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.96
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	86.64
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.6
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	86.44
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	86.33
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.04
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	85.82
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	85.81
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.79
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	85.46
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.16
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	85.12
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	85.11
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	85.07
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	84.4
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	84.3
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	84.21
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	83.66
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	83.66
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	83.65
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	83.62
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.34
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	83.15
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	83.01
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	82.37
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	82.23
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	82.03
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	81.9
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	81.32
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	81.07
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	80.92
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	80.77
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	80.7
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	80.57
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	80.5
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.47
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.29
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.19

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=5.3e-32  Score=216.72  Aligned_cols=149  Identities=32%  Similarity=0.546  Sum_probs=136.8

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      .|||++++++|++++++++.+.+.|.|++|||+|||.+++||++|++.++|..+.  ...+|+++|||++|+|+++|+++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~~vG~~v   79 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAVGDNA   79 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCc--cccccccCccceeeeeEeeccee
Confidence            4999999999999999986368999999999999999999999999999997543  34688999999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEE
Q 017901          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~  181 (364)
                      ++|++||||++...   .+|+|+||++++.+.++++|+++++++||+++++++|+|+++...+....|+++||.
T Consensus        80 ~~~~vGdrV~~~~~---~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          80 SAFKKGDRVFTSST---ISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TTCCTTCEEEESCC---SSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eccccCcccccccc---ccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            99999999998765   459999999999999999999999999999999999999998889999999999873

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.97  E-value=1.4e-31  Score=221.19  Aligned_cols=150  Identities=23%  Similarity=0.233  Sum_probs=131.2

Q ss_pred             eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~  109 (364)
                      .|+++.   ++++++++ ++|.|+|+++|||||++++|||++|++.+.+........+.|+++|||++|+|+++|+++++
T Consensus         3 maAVl~---g~~~l~~~-e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~   78 (178)
T d1e3ja1           3 LSAVLY---KQNDLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   78 (178)
T ss_dssp             EEEEEE---ETTEEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             eEEEEE---cCCcEEEE-EeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCC
Confidence            355566   34569999 99999999999999999999999999999875444445578999999999999999999999


Q ss_pred             CCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          110 LTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       110 ~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      |++||||+....                        ....+|+|+||+++|.++++++|+++++++++.+.+++.|||++
T Consensus        79 ~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a  158 (178)
T d1e3ja1          79 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDA  158 (178)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHH
T ss_pred             CCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHH
Confidence            999999987532                        11356999999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCC
Q 017901          166 LKCAARMSEGQRLLVLGGG  184 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~  184 (364)
                      + +.+++++|++|+|.||+
T Consensus       159 ~-~~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         159 F-EAARKKADNTIKVMISC  176 (178)
T ss_dssp             H-HHHHHCCTTCSEEEEEC
T ss_pred             H-HHhCCCCCCEEEEEccc
Confidence            8 68999999999999965

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=2.1e-30  Score=213.45  Aligned_cols=151  Identities=26%  Similarity=0.346  Sum_probs=132.0

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      +||+||||++++++|.+  ++++ ++|.|.|++|||+||+.++|||++|++.++|..+  ....+|+++|||++|+|+++
T Consensus         1 ~~P~tMkA~v~~~~g~p--l~l~-evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~--~~~~~P~i~GhE~~G~V~~~   75 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP--LRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP--VKPPLPFIPGHEGVGYVAAV   75 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEE
T ss_pred             CcchhcEEEEEEeCCCC--CEEE-EeECCCCCCCEEEEEEEEecCcccchhhhccCcc--ccccCCcCCCCcceEEEEEe
Confidence            48999999999998877  8889 9999999999999999999999999999999653  23468999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchH
Q 017901          104 GASVRSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA  159 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  159 (364)
                      |+++++|++||||+....                        ....+|+|+||++++.++++++|+++++..++++..++
T Consensus        76 G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~  155 (175)
T d1llua1          76 GSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDI  155 (175)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGH
T ss_pred             CCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHH
Confidence            999999999999986421                        11367899999999999999999999999888888899


Q ss_pred             HHHHHHHHHhcccCCCCEEEEE
Q 017901          160 LTAWRALKCAARMSEGQRLLVL  181 (364)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~vli~  181 (364)
                      .|+++++ +.+ ..+|++|||.
T Consensus       156 ~t~~~~~-~~g-~~~G~~VLVl  175 (175)
T d1llua1         156 NQILDQM-RAG-QIEGRIVLEM  175 (175)
T ss_dssp             HHHHHHH-HTT-CCSSEEEEEC
T ss_pred             HHHHHHH-HhC-CCCCCEEEeC
Confidence            9999887 434 4479999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=5e-30  Score=209.91  Aligned_cols=146  Identities=21%  Similarity=0.321  Sum_probs=131.0

Q ss_pred             eeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      ||+++.++|.+  |+++ +++.|++ ++||||||+.+++||++|++.++|..+......+|+++|||++|+|+++|++++
T Consensus         1 kA~~~~~~g~p--l~i~-~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~   77 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVE   77 (171)
T ss_dssp             CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CEEEEEeCCCC--CEEE-EeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCC
Confidence            78999999987  8999 9999985 689999999999999999999999776555567899999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (364)
                      +|++||||+.....                       ...+|+|+||+.++.++++++|++++++.++++++++.|||++
T Consensus        78 ~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~a  157 (171)
T d1h2ba1          78 GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLER  157 (171)
T ss_dssp             SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHH
T ss_pred             cCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHH
Confidence            99999999975431                       1367999999999999999999999998898899999999999


Q ss_pred             HHHhcccCCCCEEEE
Q 017901          166 LKCAARMSEGQRLLV  180 (364)
Q Consensus       166 l~~~~~~~~g~~vli  180 (364)
                      + +.+.+ .|++|||
T Consensus       158 l-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         158 L-EKGEV-LGRAVLI  170 (171)
T ss_dssp             H-HTTCC-SSEEEEE
T ss_pred             H-HhcCC-CCCEEEe
Confidence            8 56788 8999998

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1e-29  Score=211.16  Aligned_cols=154  Identities=16%  Similarity=0.200  Sum_probs=132.7

Q ss_pred             ccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        24 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      ++|.+||++.+..++...++++. +.+.++++|+|||||+.|+|||++|++.+.|..+   ...+|+++|||++|+|+++
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~-~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~---~~~~P~i~GHE~~G~Vv~v   77 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKT-KYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVKL   77 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEEE
T ss_pred             CCCceeEEEEEeCCCcCCcceEe-eccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC---CCCCCcCcccccccchhhc
Confidence            57899999999999888888888 8887778999999999999999999999998643   3478999999999999999


Q ss_pred             cCCC-CCCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhh
Q 017901          104 GASV-RSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHAD  151 (364)
Q Consensus       104 G~~~-~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~  151 (364)
                      |+++ +.+++||||.....                               ....+|+|+||++++.++++++|+++++++
T Consensus        78 G~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~  157 (192)
T d1piwa1          78 GPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVET  157 (192)
T ss_dssp             CTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEE
T ss_pred             ccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHH
Confidence            9987 67999999964321                               112579999999999999999999999987


Q ss_pred             hccccchHHHHHHHHHHhcccCCCCEEEEEc
Q 017901          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (364)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g  182 (364)
                      |+.+...+.|||+++ +++.+++|++|+|.-
T Consensus       158 Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         158 LPVGEAGVHEAFERM-EKGDVRYRFTLVGYD  187 (192)
T ss_dssp             EESSHHHHHHHHHHH-HHTCCSSEEEEECCH
T ss_pred             HHHHHHHHHHHHHHH-HHhCCCCCCEEEEEC
Confidence            766555577999998 679999999999863

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3e-29  Score=200.25  Aligned_cols=143  Identities=29%  Similarity=0.449  Sum_probs=126.4

Q ss_pred             eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (364)
Q Consensus        30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~  109 (364)
                      +.+.|+++|+++.|+++ +.+.|.|++|||+||+.|++||++|++.++|.++   ...+|+++|||++|+|+++|+++++
T Consensus         2 ~~i~~~~~G~pe~l~~~-e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   77 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKH   77 (147)
T ss_dssp             EEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             eEEEEcccCCCceeEEE-EecCCCCCCCEEEEEEEEecccceeeeeecCCCC---CCcceeeeccccccceeeeeeeccc
Confidence            46889999999999999 9999999999999999999999999999999753   3478999999999999999999999


Q ss_pred             CCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhh--ccccchHHHHHHHHHHhcccCCCCEEEE
Q 017901          110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADA--SAIPFAALTAWRALKCAARMSEGQRLLV  180 (364)
Q Consensus       110 ~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~g~~vli  180 (364)
                      |++||||+....   ..|+|++|++++.+.++++|++++++++  ++++....++++++. ..++++|++|||
T Consensus        78 ~~vGdrV~~~~~---~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~-~~~~~~G~~VLI  146 (147)
T d1qora1          78 IKAGDRVVYAQS---ALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEIL-ESRATQGSSLLI  146 (147)
T ss_dssp             CCTTCEEEESCC---SSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHH-HTTCCCBCCEEE
T ss_pred             ccccceeeeecc---ccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEe
Confidence            999999987654   3599999999999999999999988755  445667778888874 468999999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=1.3e-29  Score=212.56  Aligned_cols=149  Identities=19%  Similarity=0.226  Sum_probs=132.9

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      .++||+++.+++.+  ++++ +++.|+|+++||+||+.++|||++|++.+.|..   .+..+|+++|||++|+|+++|++
T Consensus         7 ~~~kAav~~~~~~p--l~i~-ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~---~~~~~p~i~GhE~~G~v~~vG~~   80 (199)
T d1cdoa1           7 IKCKAAVAWEANKP--LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK---HKDGFPVVLGHEGAGIVESVGPG   80 (199)
T ss_dssp             EEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTC---CTTSCSEECCCCEEEEEEEECTT
T ss_pred             eEEEEEEEecCCCC--cEEE-EEECCCCCCCEEEEEEEEEEEecchhhhhhhcc---cccccccccccccceEEEEEcCC
Confidence            45679999988877  8999 999999999999999999999999999999963   34478999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCcccc
Q 017901          107 VRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTP  142 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~  142 (364)
                      +++|++||||+......                                            ...|+|+||++++.+++++
T Consensus        81 v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~  160 (199)
T d1cdoa1          81 VTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK  160 (199)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred             CceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEE
Confidence            99999999998764311                                            0149999999999999999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEE
Q 017901          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (364)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~  181 (364)
                      +|++++++++|++.+++.|+++++......+.|++|||.
T Consensus       161 iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         161 IDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999999999999999999999888888999999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=6.4e-29  Score=209.19  Aligned_cols=148  Identities=23%  Similarity=0.359  Sum_probs=129.0

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      -+++|||+++++++.+  ++++ ++|.|.|+++||||||.++|||++|++.++|..+    ..+|+++|||++|+|+++|
T Consensus         5 ~~~~~KAaV~~~~g~p--l~i~-evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~----~~~P~v~GHE~~G~V~~vG   77 (202)
T d1e3ia1           5 KVIKCKAAIAWKTGSP--LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPKKK----ALFPVVLGHECAGIVESVG   77 (202)
T ss_dssp             SCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC----CCSSBCCCCEEEEEEEEEC
T ss_pred             CeEEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEEEEeccccceeeeecc----cccccccccccceEEeeec
Confidence            3568999999988877  8999 9999999999999999999999999999999643    4679999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCC------------------------------------------------CCCCcceeEEeec
Q 017901          105 ASVRSLTVGQEVFGALHPT------------------------------------------------AVRGTYADYAVLS  136 (364)
Q Consensus       105 ~~~~~~~~Gd~V~~~~~~~------------------------------------------------~~~g~~~~~~~~~  136 (364)
                      ++++++++||||+......                                                ...|+|+||++++
T Consensus        78 ~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~  157 (202)
T d1e3ia1          78 PGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVS  157 (202)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEE
T ss_pred             CCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEe
Confidence            9999999999998754210                                                1148999999999


Q ss_pred             CCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEc
Q 017901          137 EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (364)
Q Consensus       137 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g  182 (364)
                      +++++++|++++++.++++.+++.++++++.   .+++|++|.|..
T Consensus       158 ~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi~  200 (202)
T d1e3ia1         158 EANLARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL  200 (202)
T ss_dssp             GGGEEECCTTSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEEE
T ss_pred             hhhEEECCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEEE
Confidence            9999999999999988888888888888873   257899987764

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=1e-28  Score=192.02  Aligned_cols=130  Identities=28%  Similarity=0.375  Sum_probs=118.0

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||++++++|++  ++++ +.+.|.|++|||+||+.++|||++|++.+.|.++.  ...+|+++|||++|+|        
T Consensus         1 MkA~~~~~~G~~--l~~~-e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V--------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVV--------   67 (131)
T ss_dssp             CEEEEECSTTSC--EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEE--------
T ss_pred             CcEEEEccCCCC--CEEE-EccCCCCCCCEEEEEEEEEeccccccccccccccc--cccceeEeeeeeEEee--------
Confidence            899999999887  8899 99999999999999999999999999999997532  3478999999999999        


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEE
Q 017901          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV  180 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli  180 (364)
                         +||+|+++..    +|+|+||++++.+.++++|+++++++||++++++.|||++|.+++  +.|++||+
T Consensus        68 ---vGd~V~~~~~----~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~  130 (131)
T d1iz0a1          68 ---EGRRYAALVP----QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVR  130 (131)
T ss_dssp             ---TTEEEEEECS----SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEE
T ss_pred             ---ccceEEEEec----cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEE
Confidence               3999998875    699999999999999999999999999999999999999996655  56898886

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-28  Score=204.42  Aligned_cols=147  Identities=24%  Similarity=0.306  Sum_probs=124.0

Q ss_pred             ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (364)
Q Consensus        28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~  107 (364)
                      ++.|++++   ++++++++ ++|.|+|+++||+|||.++|||++|++.+++.........+|+++|||++|+|+++|+++
T Consensus         7 ~~~a~V~~---gp~~l~l~-evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   82 (185)
T d1pl8a1           7 NNLSLVVH---GPGDLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV   82 (185)
T ss_dssp             CCEEEEEE---ETTEEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred             CCEEEEEe---CCCeEEEE-EeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccce
Confidence            56799999   55669999 999999999999999999999999999998643333345789999999999999999999


Q ss_pred             CCCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHH
Q 017901          108 RSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW  163 (364)
Q Consensus       108 ~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  163 (364)
                      ++|++||||+....                        ....+|+|+||++++.++++++|+++++++++.+++  .+|+
T Consensus        83 ~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl--~~a~  160 (185)
T d1pl8a1          83 KHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPL--EKAL  160 (185)
T ss_dssp             CSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEG--GGHH
T ss_pred             eeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHHH--HHHH
Confidence            99999999986432                        113578999999999999999999999998877654  3566


Q ss_pred             HHHHHhcccCCCCEEEEE
Q 017901          164 RALKCAARMSEGQRLLVL  181 (364)
Q Consensus       164 ~~l~~~~~~~~g~~vli~  181 (364)
                      +++ +...+++|++|+|.
T Consensus       161 ~a~-~~~~~~~G~~VlIg  177 (185)
T d1pl8a1         161 EAF-ETFKKGLGLKIMLK  177 (185)
T ss_dssp             HHH-HHHHTTCCSEEEEE
T ss_pred             HHH-HHhCCCCCCEEEEE
Confidence            666 56778999999983

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=1.3e-28  Score=197.46  Aligned_cols=149  Identities=23%  Similarity=0.305  Sum_probs=130.6

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      .+|||+++++++++..+.++ +++.|+|++|||||||.|+|||++|++.+.|..+  .....|+++|+|++|+|++  ..
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~-~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~--~~~~~p~v~g~e~~G~v~~--~~   76 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK--IVKTYPFVPGIDLAGVVVS--SQ   76 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS--SCCSSSBCCCSEEEEEEEE--CC
T ss_pred             CceEEEEEEecCCceEEEEE-EccCCCCCCCEEEEEEEEeCCChHHHHHHhhccc--ccccccceeeeeeeeeeec--cC
Confidence            46899999999998888899 9999999999999999999999999999988643  2346899999999999998  55


Q ss_pred             CCCCCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEc
Q 017901          107 VRSLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g  182 (364)
                      +..|++||+|+.....  ...+|+|+||+++|.++++++|++++ .+||+++++++|||.++...++++ |++||+.|
T Consensus        77 ~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          77 HPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             SSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            6789999999987642  23579999999999999999999998 478889999999998887888876 99999975

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=1.8e-28  Score=204.81  Aligned_cols=149  Identities=22%  Similarity=0.297  Sum_probs=130.8

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      .+|||+++.++|.+  ++++ ++|.|+|+++||||||.++|||++|++++.|...   ...+|+++|||++|+|+++|++
T Consensus         5 ~~~kAav~~~~g~~--l~i~-evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~---~~~~p~v~GhE~~G~V~~vG~~   78 (197)
T d2fzwa1           5 IKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEG   78 (197)
T ss_dssp             EEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTT
T ss_pred             eEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc---cccccccCCcceeeEEEeecCC
Confidence            46899999998887  8999 9999999999999999999999999999999643   3468999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCcccc
Q 017901          107 VRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTP  142 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~  142 (364)
                      ++.+++||||+......                                            ..+|+|+||++++.+++++
T Consensus        79 V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~  158 (197)
T d2fzwa1          79 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAK  158 (197)
T ss_dssp             CCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             ceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEE
Confidence            99999999998753210                                            0148999999999999999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEE
Q 017901          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (364)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~  181 (364)
                      +|++++++++|++.+++.|+++++.....-+.+++|+|.
T Consensus       159 vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         159 IDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             CCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999999999999999998665556778888873

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=5.3e-28  Score=198.35  Aligned_cols=145  Identities=28%  Similarity=0.409  Sum_probs=121.7

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++++++.+  ++++ +++.|+|++||||||++++|||++|++.+++...  ....+|+++|||++|+|+++|++++
T Consensus         1 MkA~v~~~~g~p--l~i~-~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~--~~~~~p~v~GhE~~G~Vv~vG~~v~   75 (171)
T d1rjwa1           1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKLPLIPGHEGVGIVEEVGPGVT   75 (171)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEecCCCC--cEEE-EeECCCCCCCeEEEEEEEeeccccceeeeecccc--cccccccccCCEEEEEEEEeccccc
Confidence            899999988876  8999 9999999999999999999999999999887532  2347899999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (364)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (364)
                      ++++||||.....                        ....+|+|+||++++.++++++|++++++.|+ +. ...++++
T Consensus        76 ~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~  153 (171)
T d1rjwa1          76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFD  153 (171)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHH
T ss_pred             CceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHH
Confidence            9999999975321                        11356999999999999999999999986554 43 3457777


Q ss_pred             HHHHhcccCCCCEEEEEc
Q 017901          165 ALKCAARMSEGQRLLVLG  182 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g  182 (364)
                      ++ .++.+ +|++|||.|
T Consensus       154 ~~-~~~~~-~G~tVlViG  169 (171)
T d1rjwa1         154 RM-LKGQI-NGRVVLTLE  169 (171)
T ss_dssp             HH-HTTCC-SSEEEEECC
T ss_pred             HH-HhcCC-CCCEEEEeC
Confidence            76 34565 599999998

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=3e-27  Score=196.76  Aligned_cols=145  Identities=21%  Similarity=0.253  Sum_probs=123.2

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ++|+|+++.+.+++  ++++ ++|.|+|+++|||||+.++|||++|++.+.|..+    ..+|+++|||++|+|+++|++
T Consensus         2 k~~~Aav~~~~g~~--l~l~-~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~----~~~P~i~GHE~~G~V~~vG~~   74 (194)
T d1f8fa1           2 KDIIAAVTPCKGAD--FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEAIGPN   74 (194)
T ss_dssp             EEEEEEEBCSTTCC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEEECTT
T ss_pred             ceeEEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc----ccCCcccccceEEEeeecCcc
Confidence            46899999988877  8999 9999999999999999999999999999999643    368999999999999999999


Q ss_pred             CCCCCCCCEEEEecCC-------------------------C--------------------CCCCcceeEEeecCCccc
Q 017901          107 VRSLTVGQEVFGALHP-------------------------T--------------------AVRGTYADYAVLSEDELT  141 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~-------------------------~--------------------~~~g~~~~~~~~~~~~~~  141 (364)
                      +++|++||||+.....                         .                    ...|+|+||++++..+++
T Consensus        75 v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~  154 (194)
T d1f8fa1          75 VTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTV  154 (194)
T ss_dssp             CCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEE
T ss_pred             ceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEE
Confidence            9999999999763211                         0                    013789999999999999


Q ss_pred             cCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEE
Q 017901          142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA  204 (364)
Q Consensus       142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~  204 (364)
                      ++|++++++++                         +++.| .|.+|++++|+++.+|++.+.
T Consensus       155 ~ip~~i~~~~~-------------------------~~i~g-~g~~g~~aiq~a~~~g~~~ii  191 (194)
T d1f8fa1         155 KVTKDFPFDQL-------------------------VKFYA-FDEINQAAIDSRKGITLKPII  191 (194)
T ss_dssp             EECTTCCGGGG-------------------------EEEEE-GGGHHHHHHHHHHTSCSEEEE
T ss_pred             ECCCCCCcccE-------------------------EEEeC-cHHHHHHHHHHHHHcCCCEEE
Confidence            99999886543                         34445 899999999999999985443

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=1.5e-27  Score=196.27  Aligned_cols=145  Identities=25%  Similarity=0.343  Sum_probs=122.6

Q ss_pred             cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (364)
Q Consensus        25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG  104 (364)
                      |++.|||+++++++.+  ++++ +++.|+|+++||||||.++|||++|++.++|..+   ..++|+++|||++|+|+++|
T Consensus         1 m~~k~kA~v~~~~~~p--l~i~-ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~---~~~~P~vlGHE~~G~V~~vG   74 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQP--LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGHEGAGRVVEVN   74 (184)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEES
T ss_pred             CCceEEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEECCCCCchhheeccCC---ccccccccceeeeeeeeEEe
Confidence            6778999999988877  8999 9999999999999999999999999999999643   34689999999999999999


Q ss_pred             CCCC-----CCCCCCEEEEecCC--------------------------------CCCCCcceeEEeec-CCccccCCCC
Q 017901          105 ASVR-----SLTVGQEVFGALHP--------------------------------TAVRGTYADYAVLS-EDELTPKPVS  146 (364)
Q Consensus       105 ~~~~-----~~~~Gd~V~~~~~~--------------------------------~~~~g~~~~~~~~~-~~~~~~ip~~  146 (364)
                      ++++     .+++||+|+.....                                ...+|+|+||++++ .++++++|++
T Consensus        75 ~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~  154 (184)
T d1vj0a1          75 GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEK  154 (184)
T ss_dssp             SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTT
T ss_pred             ccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCC
Confidence            9985     46899999864310                                02479999999996 5789999999


Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEc
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g  182 (364)
                      ++.++      ++.+|++++ +++++++|++|+|+.
T Consensus       155 l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         155 ITHRL------PLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             CCEEE------EGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             CCHHH------HHHHHHHHH-HHhCCCcCCEEEEee
Confidence            98653      234678887 678999999999974

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=1.1e-26  Score=191.41  Aligned_cols=146  Identities=25%  Similarity=0.368  Sum_probs=119.4

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccc-----cCCCCCcccccceeEEEEee
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-----FEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-----~~~~~p~~~G~e~~G~V~~v  103 (364)
                      |||+++.++|.+  ++++ +++.|+|++|||+||+.++|||++|++.++|..+..     ...++|+++|||++|+|+++
T Consensus         1 MKA~~~~~~G~p--l~i~-dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~   77 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (177)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEEeCCCC--CEEE-EeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeee
Confidence            899999999887  8899 999999999999999999999999999999864321     23468999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCc-cccCCCCCChhhhccc-cch
Q 017901          104 GASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDE-LTPKPVSVTHADASAI-PFA  158 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~-~~~ip~~~~~~~aa~~-~~~  158 (364)
                      |+++++|++||||+.....                       ...+|+|+||++++... ++++|+..+ .+++++ ..+
T Consensus        78 g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~-~~~a~~~~~~  156 (177)
T d1jvba1          78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKP-MITKTMKLEE  156 (177)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCC-CCEEEEEGGG
T ss_pred             ccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCCh-HHHHHHHHHH
Confidence            9999999999999875321                       12569999999998665 555555444 455554 568


Q ss_pred             HHHHHHHHHHhcccCCCCEEEE
Q 017901          159 ALTAWRALKCAARMSEGQRLLV  180 (364)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~vli  180 (364)
                      +.++++++ ...++ .|++|||
T Consensus       157 ~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         157 ANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHHH-HTTCC-CSEEEEE
T ss_pred             HHHHHHHH-Hhhcc-cCCceEC
Confidence            88999998 55666 5889987

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2.7e-26  Score=181.89  Aligned_cols=133  Identities=22%  Similarity=0.221  Sum_probs=115.7

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++++++++..++++ +++.|+|++|||+|||.|+|||++|+....|.++.  ...+|+++|+|++|+|+++|.  .
T Consensus         1 MkA~v~~~~~~~~~l~i~-~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~--~~~~p~v~G~e~~G~V~~~~~--~   75 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQ-TLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKI--IRNFPMIPGIDFAGTVRTSED--P   75 (146)
T ss_dssp             CEEEEEECC---CEEEEE-ECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSC--CCSSSBCCCSEEEEEEEEECS--T
T ss_pred             CeEEEEEcCCCceEEEEE-EcCCCCCCCCEEEEEEeeccCccceeeEEEeeccc--ccccceeccccccccceeecc--C
Confidence            899999999999999999 99999999999999999999999999999997532  346799999999999999766  4


Q ss_pred             CCCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHH
Q 017901          109 SLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL  166 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l  166 (364)
                      .+++||+|+.....  ...+|+|+||+++|.++++++|+++|+++||+++++++||+.++
T Consensus        76 ~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          76 RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             CccceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            79999999986643  23579999999999999999999999999999999988887543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-26  Score=190.68  Aligned_cols=162  Identities=22%  Similarity=0.301  Sum_probs=138.0

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      +|+++||+++++++|||++|.+.+++++|++|||+|++|++|++++|+|+.+|++|+++++++++ +.++++|+++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~   80 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNH   80 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccccccc
Confidence            58899999999999999999888999999999999988999999999999999999999887765 88999999999999


Q ss_pred             CChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhh
Q 017901          226 SSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY  300 (364)
Q Consensus       226 ~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (364)
                      ++.++.+.++     .++|++|||+|++ .++.++++++++|+++.+|....           .+        ++...++
T Consensus        81 ~~~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~-----------~~--------~~~~~~~  140 (174)
T d1yb5a2          81 REVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRGT-----------IE--------INPRDTM  140 (174)
T ss_dssp             TSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCSC-----------EE--------ECTHHHH
T ss_pred             ccccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCCCEEEEEecCCC-----------CC--------CCHHHHH
Confidence            9988888775     2399999999986 99999999999999999986410           01        1112467


Q ss_pred             ccceeEEEEEecc-CHHHHHHHHHHHHcC
Q 017901          301 SYGIDYSYIYMRA-DAEGLEEIRRLSETG  328 (364)
Q Consensus       301 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~g  328 (364)
                      .+++++.++++.. +.+++++++++++++
T Consensus       141 ~k~~~i~g~~~~~~~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         141 AKESSIIGVTLFSSTKEEFQQYAAALQAG  169 (174)
T ss_dssp             TTTCEEEECCGGGCCHHHHHHHHHHHHHH
T ss_pred             HCCCEEEEEEecCCCHHHHHHHHHHHHHH
Confidence            7899999987643 477888888888764

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=2.6e-26  Score=192.33  Aligned_cols=147  Identities=22%  Similarity=0.310  Sum_probs=121.2

Q ss_pred             ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (364)
Q Consensus        26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~  105 (364)
                      +.+|||+++.+++.+  ++++ +++.|+|+++||||||.++|||++|++.++|..+    ..+|+++|||++|+|+++|+
T Consensus         6 ~~k~KAavl~~~~~~--l~i~-ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~----~~~P~i~GHE~~G~Vv~vG~   78 (198)
T d2jhfa1           6 VIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGE   78 (198)
T ss_dssp             CEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECT
T ss_pred             ceEEEEEEEecCCCC--CEEE-EEECCCCCCCEEEEEEEEEecccccceeecCCcc----cccceecccceeEEEEecCc
Confidence            457899999987766  8999 9999999999999999999999999999999643    46899999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCccc
Q 017901          106 SVRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELT  141 (364)
Q Consensus       106 ~~~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~  141 (364)
                      +++++++||||+......                                            ...|+|+||++++..+++
T Consensus        79 ~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~  158 (198)
T d2jhfa1          79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA  158 (198)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred             cccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeE
Confidence            999999999998754210                                            123899999999999999


Q ss_pred             cCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEc
Q 017901          142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (364)
Q Consensus       142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g  182 (364)
                      ++|+.++++.++....++.+...+.   ..+++|++|+|..
T Consensus       159 ~~p~~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         159 KIDAAFALDPLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             ECCTTSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             ECCCCCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence            9999998877666554443333322   3467899988764

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=6e-29  Score=207.97  Aligned_cols=158  Identities=22%  Similarity=0.261  Sum_probs=128.6

Q ss_pred             eeeEEecccCCCceEEEcccccCCCC-------CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEE
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-------KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-------~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (364)
                      +||++|++++   +++++ +++.|++       +++||+||+.++|||++|++.++|..+    ..+|+++|||++|+|+
T Consensus         2 ~kA~v~~~~~---~le~~-e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~----~~~P~v~GHE~~G~Vv   73 (201)
T d1kola1           2 NRGVVYLGSG---KVEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT----AQVGLVLGHEITGEVI   73 (201)
T ss_dssp             EEEEEEEETT---EEEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC----CCTTCBCCCCEEEEEE
T ss_pred             cEEEEEeCCC---ceEEE-EecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc----cccceeccceeeeeee
Confidence            6899999554   58998 9988854       569999999999999999999998643    3689999999999999


Q ss_pred             eecCCCCCCCCCCEEEEecC---------------------------------CCCCCCcceeEEeecCC--ccccCCCC
Q 017901          102 AVGASVRSLTVGQEVFGALH---------------------------------PTAVRGTYADYAVLSED--ELTPKPVS  146 (364)
Q Consensus       102 ~vG~~~~~~~~Gd~V~~~~~---------------------------------~~~~~g~~~~~~~~~~~--~~~~ip~~  146 (364)
                      ++|+++++|++||||.....                                 ....+|+|+||+++|..  ++++||++
T Consensus        74 ~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~  153 (201)
T d1kola1          74 EKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDR  153 (201)
T ss_dssp             EECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCH
T ss_pred             ccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCC
Confidence            99999999999999975321                                 01357999999999864  69999998


Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC  200 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~  200 (364)
                      .+..+++.+.....++++++ .....+.++    .| +|++|+.++|+||.+||
T Consensus       154 ~~~~~~~~~~~~~~~~~~a~-~~~~~~~g~----~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         154 DKAMEKINIAEVVGVQVISL-DDAPRGYGE----FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHHHHTCCHHHHHTEEEECG-GGHHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred             CChHHHHHHHHHHHHHHHHH-HhCCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence            77777777776666777776 445544443    46 89999999999999886

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=7.1e-28  Score=195.28  Aligned_cols=154  Identities=21%  Similarity=0.244  Sum_probs=133.3

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      ++|||+++++.++...++++ +++.|+|++|||||||+|+|||++|++.+.|..+  .....|+++|+|++|+|++  +.
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~-~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~--~~~~~~~~~g~e~~G~v~~--~~   76 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVS--SN   76 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEE--CS
T ss_pred             CcEEEEEEEecCCCeEEEEE-EcCCCCCCCCEEEEEEEEecccchhhheeeeccc--ccccceeeeeeeccccccc--cc
Confidence            46999999999999999999 9999999999999999999999999999998653  2346789999999999998  55


Q ss_pred             CCCCCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCC
Q 017901          107 VRSLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~  184 (364)
                      ++++++||+|+.....  ...+|+|+||+++|++.++++|+++++++||.+++.++|||+++. ......+++||++|+.
T Consensus        77 ~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga~  155 (162)
T d1tt7a1          77 DPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQ  155 (162)
T ss_dssp             STTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCCS
T ss_pred             ccccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCc
Confidence            6789999999987652  236799999999999999999999999999999999999997753 3445556788888876


Q ss_pred             ch
Q 017901          185 GA  186 (364)
Q Consensus       185 g~  186 (364)
                      |.
T Consensus       156 G~  157 (162)
T d1tt7a1         156 GR  157 (162)
T ss_dssp             SE
T ss_pred             ce
Confidence            64

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=3e-26  Score=191.42  Aligned_cols=145  Identities=21%  Similarity=0.299  Sum_probs=119.7

Q ss_pred             cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (364)
Q Consensus        27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~  106 (364)
                      .||||+++++++.+  ++++ +++.|+|+++|||||+.|+|||+||+++++|..    +..+|+++|||++|+|+++|++
T Consensus         7 ~~~KAav~~~~g~~--l~i~-ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~----~~~~P~i~GHE~~G~Vv~~G~~   79 (198)
T d1p0fa1           7 ITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEII----PSKFPVILGHEAVGVVESIGAG   79 (198)
T ss_dssp             EEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCCEEEEEEEECTT
T ss_pred             eEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEEEEecccceeeeecc----ccccccccceeeeeeeeecCcc
Confidence            48999999987766  9999 999999999999999999999999999999964    3478999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCcccc
Q 017901          107 VRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTP  142 (364)
Q Consensus       107 ~~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~  142 (364)
                      ++++++||||+......                                            ...|+|+||+.++..++++
T Consensus        80 v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~k  159 (198)
T d1p0fa1          80 VTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAK  159 (198)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEE
T ss_pred             cccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEE
Confidence            99999999998744210                                            0248899999999999999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHH
Q 017901          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF  189 (364)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~  189 (364)
                      +|++++...++...+...+..          +++.|+|.| +|++|+
T Consensus       160 ip~~~~~~~~~~~~~~~~~v~----------~~~~vlv~G-~G~iGl  195 (198)
T d1p0fa1         160 IDPKINVNFLVSTKLTLDQIN----------KAFELLSSG-QGVRSI  195 (198)
T ss_dssp             ECTTSCGGGGEEEEECGGGHH----------HHHHHTTTS-SCSEEE
T ss_pred             CCCCCCHHHHHHhhcchhhcC----------CCCEEEEEC-CCcceE
Confidence            999999887766555433333          334477777 677664

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=5.8e-28  Score=199.08  Aligned_cols=160  Identities=23%  Similarity=0.231  Sum_probs=132.6

Q ss_pred             ceeeEEecccCCCc---eEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccC-------CCCCccccccee
Q 017901           28 SCRAVVLPRFGGPE---VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE-------PLLPLILGRDIS   97 (364)
Q Consensus        28 ~~~a~~~~~~g~~~---~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~-------~~~p~~~G~e~~   97 (364)
                      ||||+++.++|.|+   +++.. ++|.|+|++||||||+++++||++|++.++|..+....       ...|.++|+|++
T Consensus         3 t~kA~v~~~~G~p~~~l~l~~~-~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           3 TAQAVLYTQHGEPKDVLFTQSF-EIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEESSCSCHHHHCEEEEE-EECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             eeEEEEEccCCCcccccEEEEE-ECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            68999999999874   34555 77778899999999999999999999999986542211       356789999999


Q ss_pred             EEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHH-hcccCCCC
Q 017901           98 GEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC-AARMSEGQ  176 (364)
Q Consensus        98 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~  176 (364)
                      |+|+++|.++..++.||+|.....   ..|+|+||++++.++++++|++++...+  +++.++|||+++.. ...+++|+
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~~---~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~  156 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSHV---NFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLH  156 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSS---CCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHH
T ss_pred             cccccccccccccccccceecccc---ccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCC
Confidence            999999999999999999998766   4589999999999999999998764444  44567788888643 36789999


Q ss_pred             EEEEEc-CCchHHHHHHH
Q 017901          177 RLLVLG-GGGAVGFAAVQ  193 (364)
Q Consensus       177 ~vli~g-~~g~~G~~~~~  193 (364)
                      +|+|+| |+|++|++++|
T Consensus       157 ~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         157 ELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHHHHHTGGGSCEEEE
T ss_pred             EEEEECccchhhhheEEe
Confidence            999998 45789988776

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=2e-25  Score=185.11  Aligned_cols=166  Identities=26%  Similarity=0.354  Sum_probs=136.9

Q ss_pred             hhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCCh
Q 017901          150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSK  228 (364)
Q Consensus       150 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~  228 (364)
                      +|||+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++ +.++++|+++++++++.
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSV   80 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCS
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCcc
Confidence            47999999999999999888999999999999999999999999999999999999877664 88999999999999998


Q ss_pred             hHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccc
Q 017901          229 DIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYG  303 (364)
Q Consensus       229 ~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (364)
                      ++.+.++     .++|++|||+|++ .++.++++|+++|+++.+|....           .+..      ......+.++
T Consensus        81 ~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~-----------~~~~------~~~~~~~~~~  142 (183)
T d1pqwa_          81 DFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDV-----------YADA------SLGLAALAKS  142 (183)
T ss_dssp             THHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGG-----------TTTC------EEEGGGGTTT
T ss_pred             CHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCCCEEEEEccCCC-----------CCCc------ccchHHHhCC
Confidence            8888775     1399999999997 99999999999999999986521           0110      0001234577


Q ss_pred             eeEEEEEecc--------CHHHHHHHHHHHHcCCceec
Q 017901          304 IDYSYIYMRA--------DAEGLEEIRRLSETGKLKIP  333 (364)
Q Consensus       304 ~~~~~~~~~~--------~~~~~~~~~~~~~~g~i~~~  333 (364)
                      +++.++....        .++.++++++++++|+++|.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         143 ASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             CEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             cEEEEEEccceeccCHHHHHHHHHHHHHHHHCCCCcee
Confidence            7887775421        14578889999999999984

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=7.4e-25  Score=179.66  Aligned_cols=135  Identities=20%  Similarity=0.182  Sum_probs=110.2

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+...+++.+  |+++ +++.|+|++||||||+.++|||++|++.+.|..+   ...+|+++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~p--l~i~-ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~---~~~~P~i~GhE~~G~V~~vG~~V~   74 (179)
T d1uufa1           1 IKAVGAYSAKQP--LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA---GTVYPCVPGHEIVGRVVAVGDQVE   74 (179)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS---CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             CeEEEEccCCCC--CEEE-EecCCCCCCCEEEEEEEEECCCCCcceeeeeeec---cccccccccccccccchhhccccc
Confidence            789999988777  9999 9999999999999999999999999999998643   347899999999999999999999


Q ss_pred             CCCCCCEEEEecC--------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901          109 SLTVGQEVFGALH--------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (364)
Q Consensus       109 ~~~~Gd~V~~~~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (364)
                      ++++||+|.....                                ....+|+|+||+++|+++++++|++.....   +.
T Consensus        75 ~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~---~a  151 (179)
T d1uufa1          75 KYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMI---RA  151 (179)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEE---CG
T ss_pred             cCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChh---Hh
Confidence            9999999964321                                002458999999999999999997653322   22


Q ss_pred             chHHHHHHHHHHhcccC
Q 017901          157 FAALTAWRALKCAARMS  173 (364)
Q Consensus       157 ~~~~ta~~~l~~~~~~~  173 (364)
                      .++.++++++ .++.++
T Consensus       152 ~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         152 DQINEAYERM-LRGDVK  167 (179)
T ss_dssp             GGHHHHHHHH-HTTCSS
T ss_pred             chhHHHHHHH-HHhCcc
Confidence            3456888887 445543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=2.9e-25  Score=181.15  Aligned_cols=166  Identities=22%  Similarity=0.213  Sum_probs=130.1

Q ss_pred             CChhhhccccchHHHHHHHH---HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee
Q 017901          147 VTHADASAIPFAALTAWRAL---KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA  222 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l---~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v  222 (364)
                      +|++|||+++++++|||+++   .+.+..++|++|||+||+|++|.+++|+|+..|++|+++++++++ +.++++|++++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v   80 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV   80 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee
Confidence            68999999999999999665   345788899999999999999999999999999999999887665 88999999999


Q ss_pred             eeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhh
Q 017901          223 VDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT  298 (364)
Q Consensus       223 ~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (364)
                      +|+++.. .+.+.    +++|+|||++|++ .+..++++|+++|+++.+|...+            +.     .+++...
T Consensus        81 i~~~~~~-~~~~~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g------------~~-----~~~~~~~  141 (176)
T d1xa0a2          81 LAREDVM-AERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGG------------AE-----VPTTVHP  141 (176)
T ss_dssp             EECC----------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSS------------SC-----CCCCSHH
T ss_pred             eecchhH-HHHHHHhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccC------------cc-----cCCCHHH
Confidence            9987542 33222    3499999999998 99999999999999999997521            11     1122335


Q ss_pred             hhccceeEEEEEec-cCHHHHHHHHHHHHcCCcee
Q 017901          299 WYSYGIDYSYIYMR-ADAEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       299 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~i~~  332 (364)
                      ++.+++++.|.... ...+...++++.+. +.++|
T Consensus       142 ~~~k~~~i~Gv~~~~~~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         142 FILRGVSLLGIDSVYCPMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             HHHTTCEEEECCSSSCCHHHHHHHHHHHH-TTTCC
T ss_pred             HHHCCcEEEEEeCCcCCHHHHHHHHHHHh-cccCC
Confidence            78889999996542 23567777777664 66665

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.91  E-value=1.1e-24  Score=178.36  Aligned_cols=163  Identities=23%  Similarity=0.293  Sum_probs=138.3

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeee
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVD  224 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~  224 (364)
                      +++.+||+++|++.|||+++ ++.++++|++|+|+|++|++|++++|+++..|+ +|+++..++++ +.++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999998 678999999999999889999999999999996 78888766655 8899999999999


Q ss_pred             CCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhh
Q 017901          225 YSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW  299 (364)
Q Consensus       225 ~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (364)
                      ++..++.+.++     +.+|++|||+|++..++.++++++++|+++.+|....            +.      +++...+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~  141 (170)
T d1jvba2          80 ASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA------------DL------HYHAPLI  141 (170)
T ss_dssp             TTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC------------CC------CCCHHHH
T ss_pred             cCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC------------cc------ccCHHHH
Confidence            98877766655     2399999999998789999999999999999986511            11      1222246


Q ss_pred             hccceeEEEEEeccCHHHHHHHHHHHHcCC
Q 017901          300 YSYGIDYSYIYMRADAEGLEEIRRLSETGK  329 (364)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  329 (364)
                      +.+++++.|++.+ ++++++++++++++|+
T Consensus       142 ~~k~i~i~Gs~~~-~~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         142 TLSEIQFVGSLVG-NQSDFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHTCEEEECCSC-CHHHHHHHHHHHHTTS
T ss_pred             HhCCcEEEEEecC-CHHHHHHHHHHHHcCC
Confidence            7789999998865 6899999999999986

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.91  E-value=3.4e-25  Score=181.24  Aligned_cols=123  Identities=20%  Similarity=0.243  Sum_probs=104.1

Q ss_pred             eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (364)
Q Consensus        29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~  108 (364)
                      |||+++.++   ++++++ +.|.|.|+++||+||++++|||++|++.+.+.   .....+|+++|||++|+|+++|++++
T Consensus         1 MKa~v~~~~---~~l~i~-e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~---~~~~~~P~i~GhE~~G~V~~vG~~v~   73 (177)
T d1jqba1           1 MKGFAMLGI---NKLGWI-EKERPVAGSYDAIVRPLAVSPCTSDIHTVFEG---ALGDRKNMILGHEAVGEVVEVGSEVK   73 (177)
T ss_dssp             CEEEEEEET---TEEEEE-ECCCCCCCTTCEEEEEEEECCCHHHHHHHHHC---TTCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CeEEEEEeC---CCeEEE-EeeCCCCCCCEEEEEEEEEecCCCcccccccC---CCCCCCCccCcceeeEEeeecccccc
Confidence            899999954   458999 99999999999999999999999999877653   22346799999999999999999999


Q ss_pred             CCCCCCEEEEecCC--------------------------CCCCCcceeEEeecC--CccccCCCCCChhhhccccch
Q 017901          109 SLTVGQEVFGALHP--------------------------TAVRGTYADYAVLSE--DELTPKPVSVTHADASAIPFA  158 (364)
Q Consensus       109 ~~~~Gd~V~~~~~~--------------------------~~~~g~~~~~~~~~~--~~~~~ip~~~~~~~aa~~~~~  158 (364)
                      +|++||||+.....                          ...+|+|+||+++|.  .+++++|+++++++++...+.
T Consensus        74 ~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~  151 (177)
T d1jqba1          74 DFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYH  151 (177)
T ss_dssp             SCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEE
T ss_pred             eecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHH
Confidence            99999999864321                          136799999999986  368999999999887765543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=1.9e-24  Score=176.20  Aligned_cols=160  Identities=23%  Similarity=0.252  Sum_probs=136.7

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      ++++++|+++|+++|||+++ +++++++|++|+|.| +|++|++++|+||.+|++|+++.+++++ +.++++|+++++|+
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~G-aG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISG-IGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEee-ccccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999999 568999999999998 6999999999999999999999887765 88999999999999


Q ss_pred             CChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhc
Q 017901          226 SSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS  301 (364)
Q Consensus       226 ~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (364)
                      ++++..+.+.    | .|.++++++++..+..++++++++|+++.+|....            +.      +++...++.
T Consensus        79 ~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~  139 (166)
T d1llua2          79 RQEDPVEAIQRDIGG-AHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------------DF------PTPIFDVVL  139 (166)
T ss_dssp             TTSCHHHHHHHHHSS-EEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------------EE------EEEHHHHHH
T ss_pred             cchhHHHHHHHhhcC-CcccccccccchHHHHHHHHhcCCcEEEEEEecCC------------Cc------cCCHHHHHh
Confidence            8887766654    5 78888888888799999999999999999986511            11      122235678


Q ss_pred             cceeEEEEEeccCHHHHHHHHHHHHcC
Q 017901          302 YGIDYSYIYMRADAEGLEEIRRLSETG  328 (364)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~g  328 (364)
                      +++++.|++.. ++++++++++++++|
T Consensus       140 k~~~i~Gs~~~-~~~d~~e~l~l~~~G  165 (166)
T d1llua2         140 KGLHIAGSIVG-TRADLQEALDFAGEG  165 (166)
T ss_dssp             TTCEEEECCSC-CHHHHHHHHHHHHTT
T ss_pred             CCcEEEEEeec-CHHHHHHHHHHHHCc
Confidence            89999998865 688999999999987

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.91  E-value=3.4e-24  Score=177.22  Aligned_cols=163  Identities=20%  Similarity=0.248  Sum_probs=131.4

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIE  231 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~  231 (364)
                      +++.++++|||++|.+.+++++||+|||+|++|.+|++++|+|+..|++||++++++++ +.++++|++++++++++++.
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~   87 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSL   87 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCH
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHH
Confidence            56788999999999999999999999999999999999999999999999999987765 88999999999999887765


Q ss_pred             HHhc------CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcccee
Q 017901          232 LAIK------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGID  305 (364)
Q Consensus       232 ~~i~------g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (364)
                      +.+.      | +|+||||+|++ .++.++++++++|+++.+|....     ++.....+.      .++...++.++++
T Consensus        88 ~~~~~~~~~~G-vd~v~D~vG~~-~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~------~~~~~~l~~k~~t  154 (182)
T d1v3va2          88 EEALKKASPDG-YDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISV-----YNRMDQLPP------GPSPESIIYKQLR  154 (182)
T ss_dssp             HHHHHHHCTTC-EEEEEESSCHH-HHHHHGGGEEEEEEEEECCCGGG-----TTCTTSCCB------CCCHHHHHHTTCE
T ss_pred             HHHHHHhhcCC-CceeEEecCch-hhhhhhhhccCCCeEEeecceee-----ccccccCCC------CcchHHHhhcCcE
Confidence            5543      5 99999999987 99999999999999999996521     222111111      1122257788999


Q ss_pred             EEEEEeccC-----HHHHHHHHHHHHcC
Q 017901          306 YSYIYMRAD-----AEGLEEIRRLSETG  328 (364)
Q Consensus       306 ~~~~~~~~~-----~~~~~~~~~~~~~g  328 (364)
                      +.+++....     .+.++++++++++|
T Consensus       155 i~g~~~~~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         155 IEGFIVYRWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             EEECCGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEeccChHHHHHHHHHHHHHHhCc
Confidence            999876322     34577788888765

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.5e-24  Score=174.79  Aligned_cols=164  Identities=20%  Similarity=0.238  Sum_probs=135.0

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      .++..+|.++|++.|+|+++ +++++++|++|+|.| +|++|++++|+|+.+|++++++.+++++ ++++++|+++++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEec-cchHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEEC
Confidence            45678888999999999999 679999999999999 6999999999999999999988766554 88999999999999


Q ss_pred             CChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcccee
Q 017901          226 SSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGID  305 (364)
Q Consensus       226 ~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (364)
                      .+.+......+++|++|||+|++..+..++++++++|+++.+|....            +     ...+....++.++++
T Consensus        82 ~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~-----~~~~~~~~l~~k~~~  144 (168)
T d1uufa2          82 RNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT------------P-----HKSPEVFNLIMKRRA  144 (168)
T ss_dssp             TCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------------------CHHHHHTTTCE
T ss_pred             chhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCC------------C-----cccccHHHHHHCCcE
Confidence            88765554443399999999998789999999999999999986511            1     112223356678999


Q ss_pred             EEEEEeccCHHHHHHHHHHHHcCCc
Q 017901          306 YSYIYMRADAEGLEEIRRLSETGKL  330 (364)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~g~i  330 (364)
                      +.|++.. +..+++++++++.+++|
T Consensus       145 i~Gs~~~-~~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         145 IAGSMIG-GIPETQEMLDFCAEHGI  168 (168)
T ss_dssp             EEECCSC-CHHHHHHHHHHHHHHTC
T ss_pred             EEEEeec-CHHHHHHHHHHHHHcCC
Confidence            9998865 68899999999988764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=7.9e-25  Score=180.73  Aligned_cols=123  Identities=26%  Similarity=0.406  Sum_probs=113.8

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      +|+++||+++++++|||++|.+.+++++|++|+|+||+|++|++++|+|+..|++|+++++++++ +.++++|+++++|+
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~   80 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINY   80 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEEC
Confidence            58999999999999999999888899999999999999999999999999999999999887765 88999999999999


Q ss_pred             CChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          226 SSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       226 ~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +++++.+.++     +.+|+++|++|++ .+..++++++++|+++.+|..
T Consensus        81 ~~~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~  129 (179)
T d1qora2          81 REEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNS  129 (179)
T ss_dssp             TTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCT
T ss_pred             CCCCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccc
Confidence            9998888775     2399999999987 899999999999999999865

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=2.3e-24  Score=175.85  Aligned_cols=163  Identities=15%  Similarity=0.202  Sum_probs=134.2

Q ss_pred             ChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCC
Q 017901          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYS  226 (364)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~  226 (364)
                      +.+.||.+.|++.|+|+++ ++.++++|++|+|.| +|++|++++|+|+.+|++|++++++++ .+.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~G-aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVG-LGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEEC-CCCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeecc
Confidence            4567889999999999999 568999999999999 699999999999999999999977665 4889999999999876


Q ss_pred             Ch-hHHHHhcCCccEEEECCCCch--hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccc
Q 017901          227 SK-DIELAIKGKFDAVLDTIGAPE--TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYG  303 (364)
Q Consensus       227 ~~-~~~~~i~g~~D~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (364)
                      +. ++.+...+.+|+++||+++..  .+..++++++++|+++.+|....            +      ..++...++.++
T Consensus        80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------------~------~~~~~~~~~~k~  141 (168)
T d1piwa2          80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------------H------EMLSLKPYGLKA  141 (168)
T ss_dssp             GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------------S------CCEEECGGGCBS
T ss_pred             chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------------c------ccccHHHHHhCC
Confidence            54 455555544999999988752  46789999999999999986511            1      112333567889


Q ss_pred             eeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          304 IDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      +++.|++.. ++++++++++++++|+|+
T Consensus       142 ~~i~Gs~~g-~~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         142 VSISYSALG-SIKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             CEEEECCCC-CHHHHHHHHHHHHHTTCC
T ss_pred             cEEEEEeeC-CHHHHHHHHHHHHhCCCC
Confidence            999998865 688999999999999875

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.90  E-value=2.8e-24  Score=175.94  Aligned_cols=166  Identities=18%  Similarity=0.172  Sum_probs=133.0

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeee
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVD  224 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~  224 (364)
                      +++++|+.+++++.|+|+++ +.+++++|++|+|.| +|++|++++|+|+.+|+ +|+++..++++ +.++++|+++++|
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEc-CCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccc
Confidence            57899999999999999998 679999999999998 69999999999999998 68888776665 8899999999999


Q ss_pred             CCChhHHHHhc------CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhh
Q 017901          225 YSSKDIELAIK------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT  298 (364)
Q Consensus       225 ~~~~~~~~~i~------g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (364)
                      ++++++.+.+.      | +|++|||+|++..+++++++++++|+++.+|....        ....+.      +.....
T Consensus        79 ~~~~~~~~~v~~~t~g~G-~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~--------~~~~~~------~~~~~~  143 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKG-VDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGS--------GDALLI------PRVEWG  143 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSC-EEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCS--------SSEEEE------ETTTTG
T ss_pred             ccchhHHHHHHHHhhccC-cceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCC--------CCcCcC------cHhHHH
Confidence            98877776665      4 99999999998789999999999999999997511        000011      001113


Q ss_pred             hhccceeEEEEEeccCHHHHHHHHHHHHcCC
Q 017901          299 WYSYGIDYSYIYMRADAEGLEEIRRLSETGK  329 (364)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  329 (364)
                      ...+++++.+..+...+..++.++++++.|+
T Consensus       144 ~~~~~~~i~g~~~~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         144 CGMAHKTIKGGLCPGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             GGTBCCEEEEBCCCCHHHHHHHHHHHHHTTS
T ss_pred             HHhCccEEEEecCCCCcccHHHHHHHHHcCC
Confidence            4456778888766434566788888988875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=7e-24  Score=173.22  Aligned_cols=145  Identities=28%  Similarity=0.340  Sum_probs=116.2

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      +|+++||+++++++|||+++ +++++++|++|+|+|++|++|++++|+|+.+|++|+++++++++ +.++++|+++++|+
T Consensus         1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeeh
Confidence            58899999999999999999 46899999999999999999999999999999999999887665 88999999999998


Q ss_pred             CChh-HHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccce
Q 017901          226 SSKD-IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI  304 (364)
Q Consensus       226 ~~~~-~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (364)
                      .+.. ......| +|+||||+|.  .+..++++++++|+++.+|...+           .      ..+++...++.+++
T Consensus        80 ~~~~~~~~~~~g-~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~g-----------~------~~~~~~~~~~~k~~  139 (171)
T d1iz0a2          80 AEVPERAKAWGG-LDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAEG-----------E------VAPIPPLRLMRRNL  139 (171)
T ss_dssp             GGHHHHHHHTTS-EEEEEECSCT--THHHHHTTEEEEEEEEEC------------------------CCCCTTHHHHTTC
T ss_pred             hhhhhhhhcccc-ccccccccch--hHHHHHHHHhcCCcEEEEeCCCC-----------C------CCCccHHHHHHCCc
Confidence            6532 1122226 9999999883  68999999999999999986521           1      11122335678999


Q ss_pred             eEEEEEec
Q 017901          305 DYSYIYMR  312 (364)
Q Consensus       305 ~~~~~~~~  312 (364)
                      ++.+++..
T Consensus       140 ~i~g~~~~  147 (171)
T d1iz0a2         140 AVLGFWLT  147 (171)
T ss_dssp             EEEECCHH
T ss_pred             EEEEEeCc
Confidence            99998763

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=9e-24  Score=172.49  Aligned_cols=163  Identities=22%  Similarity=0.260  Sum_probs=137.9

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      +|+++||+++++++|||+++ +..++++|++|+|+| +|++|++++|+++..|++|+++..++++ +.++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceeccc
Confidence            58999999999999999998 578999999999998 6999999999999999999999876665 88999999999999


Q ss_pred             CChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhc
Q 017901          226 SSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS  301 (364)
Q Consensus       226 ~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (364)
                      ++.++...++    + .|.++++.++...+..++++++++|+++.+|....            +.      +.+...++.
T Consensus        79 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~------------~~------~~~~~~~~~  139 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------------EM------PIPIFDTVL  139 (168)
T ss_dssp             TTSCHHHHHHHHHSS-EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------------EE------EEEHHHHHH
T ss_pred             ccchhhhhcccccCC-CceEEeecCCHHHHHHHHHHhccCCceEecccccC------------CC------CCCHHHHHH
Confidence            8887776665    5 67777777777789999999999999999987511            11      112224678


Q ss_pred             cceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          302 YGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      +++++.+++.. ++++++++++++++|+++
T Consensus       140 ~~~~i~gs~~~-~~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         140 NGIKIIGSIVG-TRKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             TTCEEEECCSC-CHHHHHHHHHHHHTTSCC
T ss_pred             CCcEEEEEeeC-CHHHHHHHHHHHHhCCCC
Confidence            89999998765 688999999999999875

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.90  E-value=1.4e-23  Score=172.15  Aligned_cols=165  Identities=19%  Similarity=0.211  Sum_probs=135.2

Q ss_pred             ChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH-HHHHHcCCceeeeC
Q 017901          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      +++.|+.++|++.|||+++.+.+++++|++|+|.| +|++|++++|+|+.+|++++.+ .+++++ +.++++|+++++|+
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G-~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeC-CCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            46789999999999999988899999999999999 6999999999999999966555 555544 88999999999999


Q ss_pred             CChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhc
Q 017901          226 SSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS  301 (364)
Q Consensus       226 ~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (364)
                      +++++.++++    +++|+||||+|++..++.++++++++|+++.+|....          +.+      .+++...++.
T Consensus        81 ~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~----------~~~------~~~~~~~~~~  144 (174)
T d1f8fa2          81 KTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----------GTT------AQFDVNDLLL  144 (174)
T ss_dssp             TTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----------TCC------CCCCHHHHHH
T ss_pred             CCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCC----------Ccc------cccCHHHHHH
Confidence            8888877765    3499999999998789999999999999999986411          001      1122235678


Q ss_pred             cceeEEEEEecc--CHHHHHHHHHHHHcCC
Q 017901          302 YGIDYSYIYMRA--DAEGLEEIRRLSETGK  329 (364)
Q Consensus       302 ~~~~~~~~~~~~--~~~~~~~~~~~~~~g~  329 (364)
                      +++++.|++...  .+++++++++++++|+
T Consensus       145 k~~~i~Gs~~g~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         145 GGKTILGVVEGSGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             TTCEEEECSGGGSCHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEEEecCCChHHHHHHHHHHHHcCC
Confidence            899999987532  2678999999999985

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=8.8e-24  Score=175.65  Aligned_cols=165  Identities=19%  Similarity=0.253  Sum_probs=129.6

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEE-cCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVL-GGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE  220 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~-g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~  220 (364)
                      +|+++||+++++++|||++|.+.+++++|++++|+ ||+|++|++++|+||.+|++||+++++.+.     +.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            58999999999999999999888999999988886 778999999999999999999999765431     457899999


Q ss_pred             eeeeCCChh---HHHHhc-------CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHH
Q 017901          221 QAVDYSSKD---IELAIK-------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (364)
Q Consensus       221 ~v~~~~~~~---~~~~i~-------g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (364)
                      +++++++.+   +.+.++       +++|++|||+|++ .+..++++|+++|++|.+|...           +.+.    
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~-----------~~~~----  144 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMS-----------FQPV----  144 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCS-----------SCCE----
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCcc-----------CCCc----
Confidence            999875432   222221       2499999999988 8899999999999999998651           1121    


Q ss_pred             HHHHhhhhhhccceeEEEEEecc----C----HHHHHHHHHHHHcCC
Q 017901          291 LLKKRMQTWYSYGIDYSYIYMRA----D----AEGLEEIRRLSETGK  329 (364)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~g~  329 (364)
                        .++...++.+++++.|+++..    .    .+.+.++++++++|+
T Consensus       145 --~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         145 --TIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             --EECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             --cCcHHHHHHCCcEEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence              111224567899999986621    1    356788888888875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.89  E-value=2.7e-23  Score=170.14  Aligned_cols=160  Identities=21%  Similarity=0.231  Sum_probs=131.2

Q ss_pred             hhhhccccchHHHHHHHHHHhc-ccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          149 HADASAIPFAALTAWRALKCAA-RMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       149 ~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      +.++|+++++++|||+++.+.. .+++|++|+|.| +|++|++++|+++.+|+ +|+++.+++++ +.++++|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence            5788999999999999997655 479999999999 69999999999999998 55666666654 88999999999998


Q ss_pred             CChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhc
Q 017901          226 SSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS  301 (364)
Q Consensus       226 ~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (364)
                      +++.+...+.    ..+|++|||+|+...++.++++++++|+++.+|...             +.      +++...++.
T Consensus        85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------------~~------~~~~~~l~~  145 (172)
T d1h2ba2          85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------------EL------RFPTIRVIS  145 (172)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------------CC------CCCHHHHHH
T ss_pred             cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------------cc------cCCHHHHHh
Confidence            8765544433    139999999999878999999999999999998541             11      112225678


Q ss_pred             cceeEEEEEeccCHHHHHHHHHHHHcCC
Q 017901          302 YGIDYSYIYMRADAEGLEEIRRLSETGK  329 (364)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~  329 (364)
                      +++++.|++.. ++.+++++++++++|+
T Consensus       146 k~~~i~Gs~~~-~~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         146 SEVSFEGSLVG-NYVELHELVTLALQGK  172 (172)
T ss_dssp             TTCEEEECCSC-CHHHHHHHHHHHHTTS
T ss_pred             CCcEEEEEEec-CHHHHHHHHHHHHcCC
Confidence            89999999865 6889999999999985

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=6.8e-23  Score=169.33  Aligned_cols=163  Identities=18%  Similarity=0.252  Sum_probs=132.0

Q ss_pred             ChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      ++..+|.++|++.|||+++.+.+++++|++|+|+| +|++|++++|+|+++|+ +|+++.+++++ +.++++|+++++|+
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~G-aG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~   80 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNR   80 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEEC-CCccchhheecccccccccccccccccccccccccccceEEEec
Confidence            35567888999999999998888999999999999 69999999999999998 79999877665 88999999999998


Q ss_pred             CChhHHHH---hc------CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh
Q 017901          226 SSKDIELA---IK------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (364)
Q Consensus       226 ~~~~~~~~---i~------g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (364)
                      ++.+..+.   +.      | +|+||||+|++..+..++++++++|+++.+|....          ..+.+ +.    .+
T Consensus        81 ~~~~~~~~~~~i~~~~~~~g-~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~----------~~~~~-~~----~~  144 (182)
T d1vj0a2          81 RETSVEERRKAIMDITHGRG-ADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP----------QDPVP-FK----VY  144 (182)
T ss_dssp             TTSCHHHHHHHHHHHTTTSC-EEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSC----------CCCEE-EC----HH
T ss_pred             cccchHHHHHHHHHhhCCCC-ceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCC----------CCccc-cc----cH
Confidence            87654332   22      4 99999999998789999999999999999986411          11111 00    11


Q ss_pred             hhhhccceeEEEEEeccCHHHHHHHHHHHHcC
Q 017901          297 QTWYSYGIDYSYIYMRADAEGLEEIRRLSETG  328 (364)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  328 (364)
                      ..++.+++++.|++.. +.+++++++++++++
T Consensus       145 ~~l~~k~l~i~G~~~~-~~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         145 EWLVLKNATFKGIWVS-DTSHFVKTVSITSRN  175 (182)
T ss_dssp             HHTTTTTCEEEECCCC-CHHHHHHHHHHHHTC
T ss_pred             HHHHHCCcEEEEEEeC-CHHHHHHHHHHHHHC
Confidence            2467889999999875 688899999998875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.3e-23  Score=167.76  Aligned_cols=162  Identities=15%  Similarity=0.184  Sum_probs=131.2

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeee
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVD  224 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~  224 (364)
                      +|+++||.. .++.+||+++ +++++++|++|+|.| +|++|++++|+|+.+|+ +|+++.+++++ +.++++|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~-~~~~~~~gd~VlI~G-~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEEC-CCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccc
Confidence            478888755 4677999998 678999999999999 69999999999999999 78888777665 8899999999998


Q ss_pred             CCChhHHHHhc-------CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhh
Q 017901          225 YSSKDIELAIK-------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (364)
Q Consensus       225 ~~~~~~~~~i~-------g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (364)
                      +++.+..+..+       .++|++|||+|++..++.++++++++|+++.+|....            +.      ++++.
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------------~~------~~~~~  139 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------------MT------TVPLL  139 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------------CC------CCCHH
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------------CC------ccCHH
Confidence            87665433222       2399999999998889999999999999999997511            11      12223


Q ss_pred             hhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901          298 TWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK  331 (364)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  331 (364)
                      .++.+++++.|++..  .++++++++++++|+++
T Consensus       140 ~~~~k~l~i~Gs~~~--~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         140 HAAIREVDIKGVFRY--CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             HHHHTTCEEEECCSC--SSCHHHHHHHHHTTSCC
T ss_pred             HHHHCCcEEEEEeCC--HhHHHHHHHHHHcCCCC
Confidence            567789999998743  45789999999999874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.88  E-value=2.1e-22  Score=164.37  Aligned_cols=162  Identities=17%  Similarity=0.207  Sum_probs=125.3

Q ss_pred             ChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHHcCCceeeeC
Q 017901          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDY  225 (364)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~~g~~~v~~~  225 (364)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++..+++ ++.++++|+++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCC
Confidence            56889999999999999988889999999999998 79999999999999999 5667766555 488999999999986


Q ss_pred             CChh--HHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHHhhhh
Q 017901          226 SSKD--IELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT  298 (364)
Q Consensus       226 ~~~~--~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (364)
                      ...+  ......    +.+|++|||+|++.++..++++++++ |+++.+|.+..            +.. ++.     ..
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------------~~~-i~~-----~~  142 (174)
T d1e3ia2          81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------------EMT-IPT-----VD  142 (174)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------------EEE-EEH-----HH
T ss_pred             ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------------ccc-cch-----HH
Confidence            5422  222221    23999999999998999999999996 99999997511            110 101     11


Q ss_pred             hhccceeEEEEEecc--CHHHHHHHHHHHHcCC
Q 017901          299 WYSYGIDYSYIYMRA--DAEGLEEIRRLSETGK  329 (364)
Q Consensus       299 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~  329 (364)
                      + ..+.++.|++...  ..+++.++++++++||
T Consensus       143 ~-~~~k~i~Gs~~Gs~~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         143 V-ILGRSINGTFFGGWKSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             H-HTTCEEEECSGGGCCHHHHHHHHHHHHHTTS
T ss_pred             H-hccCEEEEEEeeCCChHHHHHHHHHHHHCcC
Confidence            2 2245677776532  2678899999999885

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.88  E-value=4.1e-22  Score=162.77  Aligned_cols=160  Identities=18%  Similarity=0.251  Sum_probs=127.0

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      +|+++||.+ .++.+||+++ +++++++|++|+|+| +|++|++++|+|+.+|++|+++.+++++ +.++++|++.+++.
T Consensus         1 VS~e~Aal~-ePla~a~~a~-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEec
Confidence            478888866 4567999998 678999999999998 8999999999999999999999887765 88999999887654


Q ss_pred             CC--h---hHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh
Q 017901          226 SS--K---DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (364)
Q Consensus       226 ~~--~---~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (364)
                      +.  .   +..+.+.    +.+|++|||+|++..+..++++++++|+++.+|....            +.      ++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------------~~------~~~~  139 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------------MV------TVPL  139 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------------CC------CCCH
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------------CC------CcCH
Confidence            33  2   2233333    2399999999998789999999999999999997511            11      1222


Q ss_pred             hhhhccceeEEEEEeccCHHHHHHHHHHHHcCC
Q 017901          297 QTWYSYGIDYSYIYMRADAEGLEEIRRLSETGK  329 (364)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  329 (364)
                      ..++.+++++.+++..  .++++++++++++|+
T Consensus       140 ~~~~~k~i~i~gs~~~--~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         140 VNACAREIDIKSVFRY--CNDYPIALEMVASGR  170 (170)
T ss_dssp             HHHHTTTCEEEECCSC--SSCHHHHHHHHHTTS
T ss_pred             HHHHHCCCEEEEEECC--HHHHHHHHHHHHcCC
Confidence            2577889999998753  347888999999885

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=2e-22  Score=166.95  Aligned_cols=172  Identities=20%  Similarity=0.292  Sum_probs=124.8

Q ss_pred             CChhhhccccchHHHHHHHHHHhcccCCC--CEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH--HHHHHcCCce
Q 017901          147 VTHADASAIPFAALTAWRALKCAARMSEG--QRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI--DRVLAAGAEQ  221 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~--~~~~~~g~~~  221 (364)
                      +|+.+.| ++.+++|||++|.+.+++++|  ++|||+||+|++|++++|+||..|++ |+++++++++  ...+++|+++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            3455543 677899999999999999988  88999999999999999999999996 5555555443  4567899999


Q ss_pred             eeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh
Q 017901          222 AVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (364)
Q Consensus       222 v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (364)
                      ++|++++++.+.++     | +|+|||++|++ .+..++++++++|+++.+|...+     |......+..   ......
T Consensus        81 vi~~~~~~~~~~~~~~~~~G-vDvv~D~vGg~-~~~~~~~~l~~~G~iv~~G~~s~-----~~~~~~~~~~---~~~~~~  150 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACPGG-VDVYFDNVGGD-ISNTVISQMNENSHIILCGQISQ-----YNKDVPYPPP---LPPAVE  150 (187)
T ss_dssp             EEETTSSCHHHHHHHHCTTC-EEEEEESSCHH-HHHHHHTTEEEEEEEEEC-----------------CCC---CCHHHH
T ss_pred             EeeccchhHHHHHHHHhccC-ceEEEecCCch-hHHHHhhhccccccEEEeccccc-----cccccccCCc---hHHHHH
Confidence            99999988887776     5 99999999987 89999999999999999986421     1111111110   001111


Q ss_pred             hhhhccceeEEEEEecc----CHHHHHHHHHHHHcCC
Q 017901          297 QTWYSYGIDYSYIYMRA----DAEGLEEIRRLSETGK  329 (364)
Q Consensus       297 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~  329 (364)
                      ..+..+++++.++.+..    ..+.++++.+++.+|+
T Consensus       151 ~~~~~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         151 AIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HHHHHTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             HHHHhcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            23556788888875421    1456788888888875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.87  E-value=7.2e-22  Score=161.46  Aligned_cols=163  Identities=19%  Similarity=0.163  Sum_probs=126.7

Q ss_pred             hhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCC
Q 017901          149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYS  226 (364)
Q Consensus       149 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~  226 (364)
                      +.+||++.|++.|+|+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ ++++++|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            4679999999999999988889999999999999 79999999999999998 67788766654 899999999999976


Q ss_pred             Chh--HHHHhc----CCccEEEECCCCchhHHHHHhhccC-CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhh
Q 017901          227 SKD--IELAIK----GKFDAVLDTIGAPETERLGLNFLKR-GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW  299 (364)
Q Consensus       227 ~~~--~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (364)
                      +.+  ..+...    +.+|++|||+|+...+..++.++++ +|+++.+|....          ....      +++. ..
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~----------~~~~------~~~~-~~  143 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----------NERL------PLDP-LL  143 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----------TCCE------EECT-HH
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecC----------cccc------ccCH-HH
Confidence            543  222222    2399999999998888899988877 599999986511          0011      1111 23


Q ss_pred             hccceeEEEEEecc-CHHHHHHHHHHHHcCC
Q 017901          300 YSYGIDYSYIYMRA-DAEGLEEIRRLSETGK  329 (364)
Q Consensus       300 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~  329 (364)
                      +.+++++.|+++.. ..+++.++++++++|+
T Consensus       144 ~~~~~~i~Gs~~G~~~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         144 LLTGRSLKGSVFGGFKGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             HHTTCEEEECSGGGCCGGGHHHHHHHHHTTS
T ss_pred             HhCCCEEEEEEeCCCCHHHHHHHHHHHHcCC
Confidence            34577888887642 3568999999999885

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.87  E-value=1.2e-21  Score=160.90  Aligned_cols=165  Identities=18%  Similarity=0.182  Sum_probs=126.8

Q ss_pred             ChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ +.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~G-aGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEec-chhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeC
Confidence            46789999999999999998889999999999999 58899999999999997 56667666654 88999999999988


Q ss_pred             CCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhh
Q 017901          226 SSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW  299 (364)
Q Consensus       226 ~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (364)
                      .+.  +....++    +.+|++||++|++..+..+..+++++|.++.++....         .....       ......
T Consensus        81 ~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~---------~~~~~-------~~~~~~  144 (176)
T d2fzwa2          81 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA---------SGEEI-------ATRPFQ  144 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCC---------TTCCE-------EECTHH
T ss_pred             CchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeecc---------ccccc-------cccHHH
Confidence            542  3333332    2399999999998788999999999999888765411         00000       000123


Q ss_pred             hccceeEEEEEecc--CHHHHHHHHHHHHcCC
Q 017901          300 YSYGIDYSYIYMRA--DAEGLEEIRRLSETGK  329 (364)
Q Consensus       300 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~  329 (364)
                      +.++.++.|+++..  ..+++.++++++++||
T Consensus       145 ~~~~~~i~Gs~~G~~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         145 LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHTTCEEEECSGGGCCHHHHHHHHHHHHHTTS
T ss_pred             HHCCCEEEEEeeeCCcHHHHHHHHHHHHHcCC
Confidence            45677888887632  2678999999999885

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1e-22  Score=166.34  Aligned_cols=158  Identities=17%  Similarity=0.175  Sum_probs=123.7

Q ss_pred             CChhhhccccchHHHHHHHHH---HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee
Q 017901          147 VTHADASAIPFAALTAWRALK---CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA  222 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v  222 (364)
                      +|+.+||+++++++|||+++.   +....+++++|||+||+|++|++++|+||.+|++||++++++++ +.++++|++++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v   80 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV   80 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc
Confidence            578999999999999997653   33445566799999999999999999999999999999888776 78999999999


Q ss_pred             eeCCChhHHHHhc-CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhc
Q 017901          223 VDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS  301 (364)
Q Consensus       223 ~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (364)
                      +|+++.++...+. ...|.++|++|++ .+...+++++++|+++.+|...+           ...      +.+...++.
T Consensus        81 i~~~~~~~~~~l~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~-----------~~~------~~~~~~~~~  142 (177)
T d1o89a2          81 LPRDEFAESRPLEKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGG-----------FTL------PTTVMPFIL  142 (177)
T ss_dssp             EEGGGSSSCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTC-----------SCC------CCCSHHHHH
T ss_pred             cccccHHHHHHHHhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCC-----------ccc------cccHHHHHH
Confidence            9998766555544 2389999999998 99999999999999999997521           111      112224677


Q ss_pred             cceeEEEEEec-cCHHHHHHHH
Q 017901          302 YGIDYSYIYMR-ADAEGLEEIR  322 (364)
Q Consensus       302 ~~~~~~~~~~~-~~~~~~~~~~  322 (364)
                      +++++.|++.. .+++...+++
T Consensus       143 k~~~i~G~~~~~~~~~~~~~~~  164 (177)
T d1o89a2         143 RNVRLQGVDSVMTPPERRAQAW  164 (177)
T ss_dssp             HCCEEEECCSSSCCHHHHHHHH
T ss_pred             CCCeEEEEecccCCHHHHHHHH
Confidence            89999997542 2455444444

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.84  E-value=1.8e-20  Score=153.68  Aligned_cols=165  Identities=15%  Similarity=0.146  Sum_probs=125.8

Q ss_pred             ChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      ++++||.++|+++|+|+++.+.+++++|++|+|+| +|++|++++++++..|+ +|+++.+++++ +.++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~G-aGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEEC-CCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            46789999999999999998899999999999999 58899999999999986 88888776665 88999999999887


Q ss_pred             CCh-h-HHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhh
Q 017901          226 SSK-D-IELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW  299 (364)
Q Consensus       226 ~~~-~-~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (364)
                      .+. + ......    +.+|++|||+|.+.....++.+++++|..+.++....          ....      ......+
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~----------~~~~------~~~~~~~  144 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP----------DSQN------LSMNPML  144 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCC----------TTCC------EEECTHH
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCC----------Cccc------ccccHHH
Confidence            542 2 222222    2399999999998788999999999865555554311          0000      0001134


Q ss_pred             hccceeEEEEEecc--CHHHHHHHHHHHHcCC
Q 017901          300 YSYGIDYSYIYMRA--DAEGLEEIRRLSETGK  329 (364)
Q Consensus       300 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~  329 (364)
                      +.+++++.|++...  .++++.++++++++|+
T Consensus       145 ~~~~~~i~Gs~~G~~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         145 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHTTCEEEECSGGGCCHHHHHHHHHHHHHTTS
T ss_pred             HhCCCEEEEEEEeCCCHHHHHHHHHHHHHCcC
Confidence            56799999987632  2678999999998885

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.83  E-value=2.6e-20  Score=152.70  Aligned_cols=164  Identities=20%  Similarity=0.166  Sum_probs=125.3

Q ss_pred             ChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      ++++||.+.|++.|+|+++.+.+++++|++|+|+| +|++|++++++++..|+ +|+++.+++++ +.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            46889999999999999998889999999999999 78899999999999987 68888776664 88999999999998


Q ss_pred             CChh-HHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhh
Q 017901          226 SSKD-IELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW  299 (364)
Q Consensus       226 ~~~~-~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (364)
                      ++++ ....+.     +.+|++||++|+...+..+..+++++|.++.+++...          .....       .....
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~----------~~~~~-------~~~~~  143 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD----------LHDVA-------TRPIQ  143 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS----------SSCEE-------ECHHH
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC----------CcccC-------ccHHH
Confidence            6543 222222     2399999999998788899999888766555544311          11110       01134


Q ss_pred             hccceeEEEEEecc--CHHHHHHHHHHHHcCC
Q 017901          300 YSYGIDYSYIYMRA--DAEGLEEIRRLSETGK  329 (364)
Q Consensus       300 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~  329 (364)
                      +.++.++.|++...  .++++.++++++.+|+
T Consensus       144 ~~~~~~i~Gs~~G~~~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         144 LIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHTTCEEEECSGGGCCHHHHHHHHHHHHHTTS
T ss_pred             HHCCcEEEEEEEeCCcHHHHHHHHHHHHHcCC
Confidence            55678888887532  2678999999999885

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.83  E-value=1.8e-21  Score=157.27  Aligned_cols=155  Identities=19%  Similarity=0.182  Sum_probs=115.3

Q ss_pred             hHHHHH---HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHH
Q 017901          158 AALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELA  233 (364)
Q Consensus       158 ~~~ta~---~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~  233 (364)
                      +++|||   ++|.+....+++++|||+||+|++|++++|+||.+|++|+++++++++ +.++++|+++++++++.. .+.
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~-~~~   82 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DGT   82 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchh-chh
Confidence            456666   455555667788899999999999999999999999999999998765 899999999999874321 111


Q ss_pred             hc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEE
Q 017901          234 IK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI  309 (364)
Q Consensus       234 i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (364)
                      +.    +++|+|||++|++ .+..++++|+++|+++.+|...+           .+.      +++...++.+++++.|+
T Consensus        83 ~~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g-----------~~~------~~~~~~l~~k~~~i~G~  144 (167)
T d1tt7a2          83 LKALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGG-----------GEV------PATVYPFILRGVSLLGI  144 (167)
T ss_dssp             CCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSC-----------SCE------EECSHHHHTSCCEEEEC
T ss_pred             hhcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCC-----------Ccc------cCCHHHHHHCCcEEEEE
Confidence            21    2399999999998 99999999999999999997621           111      12223578899999997


Q ss_pred             EeccC-HHHHHHHHHHHHcCCcee
Q 017901          310 YMRAD-AEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       310 ~~~~~-~~~~~~~~~~~~~g~i~~  332 (364)
                      ..... .+....+.+.+. +.++|
T Consensus       145 ~~~~~~~~~~~~~~~~l~-~~L~P  167 (167)
T d1tt7a2         145 DSVYCPMDVRAAVWERMS-SDLKP  167 (167)
T ss_dssp             CSSSCCHHHHHHHHHHTT-TTSCC
T ss_pred             ecCCCCHHHHHHHHHHHH-hcCCC
Confidence            65333 455555555543 34443

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.83  E-value=3.7e-20  Score=151.37  Aligned_cols=161  Identities=13%  Similarity=0.123  Sum_probs=124.3

Q ss_pred             ChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeC
Q 017901          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDY  225 (364)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~  225 (364)
                      ++++||.+.|++.|+|+++.+.+++++|++|+|+| .|++|++++|+++.+|+ +|+++..++++ +.++++|+++++|+
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence            47899999999999999998889999999999999 79999999999999996 89999776665 99999999999997


Q ss_pred             CChhH-HHHhc------CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHHhhh
Q 017901          226 SSKDI-ELAIK------GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (364)
Q Consensus       226 ~~~~~-~~~i~------g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (364)
                      ++.+. .+.+.      | +|++||++|++..+..++..+.++ |+++.+|.+..          +....      ++. 
T Consensus        82 ~~~~~~~~~~~~~~~g~G-~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~----------~~~~~------~~~-  143 (176)
T d1d1ta2          82 KDSTKPISEVLSEMTGNN-VGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS----------AKMLT------YDP-  143 (176)
T ss_dssp             GGCSSCHHHHHHHHHTSC-CCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT----------TCCEE------ECT-
T ss_pred             cccchHHHHHHHHhcccc-ceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc----------ccccC------CCH-
Confidence            65432 22221      5 999999999987788888877665 99999997511          11110      000 


Q ss_pred             hhhccceeEEEEEecc--CHHHHHHHHHHHHc
Q 017901          298 TWYSYGIDYSYIYMRA--DAEGLEEIRRLSET  327 (364)
Q Consensus       298 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  327 (364)
                      ....++.++.|+++..  .++++.++++++.+
T Consensus       144 ~~~~~~~~i~Gs~~G~~~~~~dip~li~~~~~  175 (176)
T d1d1ta2         144 MLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLA  175 (176)
T ss_dssp             HHHHTTCEEEECSGGGCCHHHHHHHHHHHHTT
T ss_pred             HHHhCCCEEEEEEEeCCCcHHHHHHHHHHHhC
Confidence            2334567888887642  26788888877653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.79  E-value=2.8e-19  Score=148.37  Aligned_cols=169  Identities=15%  Similarity=0.053  Sum_probs=125.0

Q ss_pred             hhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCC
Q 017901          150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSS  227 (364)
Q Consensus       150 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~  227 (364)
                      ++.+++...+.|||+++ +.+++++|++|+|+| +|++|++++++|+.+|+ +|+++..++++ +.++++|+++++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC
Confidence            46778888999999998 679999999999999 79999999999999998 67777776655 8899999999999888


Q ss_pred             hhHHHHhc------CCccEEEECCCCc---------------hhHHHHHhhccCCCEEEEEccCchhhhhccccccccch
Q 017901          228 KDIELAIK------GKFDAVLDTIGAP---------------ETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPI  286 (364)
Q Consensus       228 ~~~~~~i~------g~~D~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (364)
                      .++.+.+.      | +|++|||+|.+               ..++.++++++++|+++.+|.+....       .....
T Consensus        80 ~~~~~~i~~~t~g~g-~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~-------~~~~~  151 (195)
T d1kola2          80 TPLHEQIAALLGEPE-VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTED-------PGAVD  151 (195)
T ss_dssp             SCHHHHHHHHHSSSC-EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCC-------TTCSS
T ss_pred             cCHHHHHHHHhCCCC-cEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCc-------ccchh
Confidence            87766654      5 99999999943               47999999999999999999652110       00000


Q ss_pred             hh--HHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCC
Q 017901          287 AT--TVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGK  329 (364)
Q Consensus       287 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  329 (364)
                      ..  ...+.+.+...+.+++++.+.... -...+.++++++.+++
T Consensus       152 ~~~~~~~~~~~~~~~~~k~~~i~~g~~~-v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         152 AAAKIGSLSIRFGLGWAKSHSFHTGQTP-VMKYNRALMQAIMWDR  195 (195)
T ss_dssp             HHHHTTCCCCCHHHHHHTTCEEEESSCC-HHHHHHHHHHHHHTTS
T ss_pred             hhhhcCceeeeHHHHHhhcceeccCCCc-hHHHHHHHHHHHHcCC
Confidence            00  001112222356677777653322 2455778888887764

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.69  E-value=3.1e-16  Score=122.85  Aligned_cols=134  Identities=16%  Similarity=0.223  Sum_probs=102.6

Q ss_pred             ceeeEEeccc--CCC--ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901           28 SCRAVVLPRF--GGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (364)
Q Consensus        28 ~~~a~~~~~~--g~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v  103 (364)
                      +.|+|++.+.  |.|  +.++++ +.++|+|++||||||++|.++++..+.....       ....-++..+++|+|++ 
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~-e~~ip~~~~gevLvk~~~~svDp~~R~~~~~-------~~~g~~~~g~~vg~Vv~-   73 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIASKR-------LKEGAVMMGQQVARVVE-   73 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHGGG-------SCTTSBCCCCEEEEEEE-
T ss_pred             ccEEEEEccCCCCCCcccceEEE-EEECCCCCCCEEEEEEEEEeEcccccccccc-------cccCCccccceEEEEEE-
Confidence            3578888865  444  569999 9999999999999999999999875543322       12233456688999988 


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCC-----hhhhccccchHHHH-HHHHHHhcccCCCCE
Q 017901          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT-----HADASAIPFAALTA-WRALKCAARMSEGQR  177 (364)
Q Consensus       104 G~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~-----~~~aa~~~~~~~ta-~~~l~~~~~~~~g~~  177 (364)
                       |++++|++||+|++.       ++|++|.+++.+.+.++|+.++     ....+++...++|| |..+  ....+.|++
T Consensus        74 -S~~~~f~~GD~V~g~-------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl--~~~~k~Get  143 (147)
T d1v3va1          74 -SKNSAFPAGSIVLAQ-------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM--LNGANLGKA  143 (147)
T ss_dssp             -ESCTTSCTTCEEEEC-------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH--HTTCCSSEE
T ss_pred             -eCCCcccCCCEEEEc-------cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh--hCCCCCCCE
Confidence             777899999999875       7899999999999999987643     33455677788885 4455  344577999


Q ss_pred             EEE
Q 017901          178 LLV  180 (364)
Q Consensus       178 vli  180 (364)
                      |++
T Consensus       144 vv~  146 (147)
T d1v3va1         144 VVT  146 (147)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=2.8e-14  Score=97.73  Aligned_cols=73  Identities=27%  Similarity=0.309  Sum_probs=64.3

Q ss_pred             CChhhhccccchHHHHHHHHH---HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC
Q 017901          147 VTHADASAIPFAALTAWRALK---CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA  219 (364)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~  219 (364)
                      +|++||+.++++++|||+++.   +....+++++++|+|++|++|.+++|+++.+|++|+++++++++ ++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCCC
Confidence            578999999999999988764   44566899999999999999999999999999999999877655 88999885

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.84  E-value=1.4e-05  Score=65.44  Aligned_cols=109  Identities=20%  Similarity=0.249  Sum_probs=77.1

Q ss_pred             cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceeeeCCCh
Q 017901          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAVDYSSK  228 (364)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~  228 (364)
                      .+..+.+.|. .+ +...+++|++||..|  ++.|+.++-+++..|.+|+++...++.     +.+.++|.+.+.-....
T Consensus        60 ~is~P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd  135 (215)
T d1jg1a_          60 TVSAPHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD  135 (215)
T ss_dssp             EECCHHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             hhhhhhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECc
Confidence            3444555554 33 678899999999998  446999999998889889999877653     34567787654322111


Q ss_pred             --h-HHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          229 --D-IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       229 --~-~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                        . +..  .+++|.|+-+.+-...-...++.|++||++|..-
T Consensus       136 ~~~g~~~--~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~pv  176 (215)
T d1jg1a_         136 GSKGFPP--KAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  176 (215)
T ss_dssp             GGGCCGG--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cccCCcc--cCcceeEEeecccccCCHHHHHhcCCCCEEEEEE
Confidence              1 111  1459999987776645578899999999999864

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=0.00019  Score=60.48  Aligned_cols=101  Identities=22%  Similarity=0.260  Sum_probs=70.2

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHhc-CCc
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAIK-GKF  238 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i~-g~~  238 (364)
                      ...++++||++||=.| +| .|.++..+|+..|  .+|+++..+++.     +.+++.|....+.....+...... ..+
T Consensus        96 i~~l~i~pG~~VLDiG-~G-sG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~~~~~~~  173 (266)
T d1o54a_          96 AMMLDVKEGDRIIDTG-VG-SGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDV  173 (266)
T ss_dssp             HHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSE
T ss_pred             HHhhCCCCCCEEEECC-CC-CCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccccccccccce
Confidence            3678999999999999 44 4888889999875  589999777653     334566653322222222222222 238


Q ss_pred             cEEEECCCCc-hhHHHHHhhccCCCEEEEEcc
Q 017901          239 DAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       239 D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |.|+--...+ ..+..+.++|+|||+++.+..
T Consensus       174 D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~P  205 (266)
T d1o54a_         174 DALFLDVPDPWNYIDKCWEALKGGGRFATVCP  205 (266)
T ss_dssp             EEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             eeeEecCCCHHHHHHHHHhhcCCCCEEEEEeC
Confidence            8877777765 578999999999999998753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=0.00014  Score=60.73  Aligned_cols=97  Identities=23%  Similarity=0.305  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc---eeeeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE---QAVDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~---~v~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      +|++++|+||++++|.+.++.+...|++|+.+.++++.  +...+++..   ...|.++.+    +.+.+.   |++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            58899999999999999999999999999999887764  444555533   233444432    222222   669999


Q ss_pred             EECCCCchh-------------------------HHHHHhhc--cCCCEEEEEccC
Q 017901          242 LDTIGAPET-------------------------ERLGLNFL--KRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~~-------------------------~~~~~~~l--~~~G~~v~~g~~  270 (364)
                      +++.|....                         .+.+++.|  +.+|++|.++..
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            999875311                         25566666  357999999864

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.61  E-value=0.00015  Score=55.89  Aligned_cols=95  Identities=18%  Similarity=0.255  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCc--eeeeCCChhHHHHhcCCccEEEECCCCc--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAP--  248 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~--~v~~~~~~~~~~~i~g~~D~vid~~g~~--  248 (364)
                      +.-+|+|.| +|..|+.+++.|+.+|+.|.+...+.+ ++.++.....  .....+...+.+.+.. +|+||-++=-+  
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-aDivI~aalipG~  108 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAE-ADLLIGAVLVPGR  108 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHT-CSEEEECCCCTTS
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhcc-CcEEEEeeecCCc
Confidence            356899999 899999999999999999999976654 4555544332  2333445567777776 99999986532  


Q ss_pred             ---h-hHHHHHhhccCCCEEEEEccC
Q 017901          249 ---E-TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       249 ---~-~~~~~~~~l~~~G~~v~~g~~  270 (364)
                         . ..+..++.|++|+.+|.+...
T Consensus       109 ~aP~lIt~~mv~~Mk~GSVIVDvaid  134 (168)
T d1pjca1         109 RAPILVPASLVEQMRTGSVIVDVAVD  134 (168)
T ss_dssp             SCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             ccCeeecHHHHhhcCCCcEEEEeecC
Confidence               1 247999999999999999865

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.60  E-value=0.0003  Score=56.20  Aligned_cols=75  Identities=19%  Similarity=0.219  Sum_probs=54.5

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHH----cCC-ceeeeCCCh-hHHHHhcCCccEEEE
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLA----AGA-EQAVDYSSK-DIELAIKGKFDAVLD  243 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~----~g~-~~v~~~~~~-~~~~~i~g~~D~vid  243 (364)
                      --.|++++|+||+|++|..+++.+...|++|+.+.++.++  +...+    ... ....|..+. +..+.+.+ +|++|+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-iDilin   98 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG-AHFVFT   98 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT-CSEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcC-cCeeee
Confidence            3478999999999999999999999999999999988764  22222    222 223455544 34444445 999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        99 ~Ag~  102 (191)
T d1luaa1          99 AGAI  102 (191)
T ss_dssp             CCCT
T ss_pred             cCcc
Confidence            9884

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.60  E-value=0.00021  Score=55.92  Aligned_cols=94  Identities=21%  Similarity=0.202  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-ccHHHHHHcCCceeee-C-C----------------------Chh
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVD-Y-S----------------------SKD  229 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~~~~~~~~g~~~v~~-~-~----------------------~~~  229 (364)
                      .-+|+|.| +|..|+.+++.|+.+|+.|.+...+ ++++.+++++...+.- . .                      .+.
T Consensus        29 pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~  107 (183)
T d1l7da1          29 PARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA  107 (183)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence            45799999 8999999999999999999999654 5568888888754311 0 0                      011


Q ss_pred             HHHHhcCCccEEEECCCCc-----h-hHHHHHhhccCCCEEEEEccC
Q 017901          230 IELAIKGKFDAVLDTIGAP-----E-TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       230 ~~~~i~g~~D~vid~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.+.+.. .|+||-++=-+     . ..+..++.|++|+.+|.+...
T Consensus       108 l~~~l~~-aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaid  153 (183)
T d1l7da1         108 VLKELVK-TDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE  153 (183)
T ss_dssp             HHHHHTT-CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHHh-hhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeec
Confidence            2333445 99999875432     1 347999999999999999865

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.56  E-value=9.3e-05  Score=60.41  Aligned_cols=106  Identities=25%  Similarity=0.294  Sum_probs=70.8

Q ss_pred             hHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-H----HHHHcCCceee--eCCCh
Q 017901          158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-D----RVLAAGAEQAV--DYSSK  228 (364)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~----~~~~~g~~~v~--~~~~~  228 (364)
                      +.+.|. .+ +...+++|++||-.| +| .|..++.+|+..|.  +|+++..+++. +    .+...+.+.+.  ..+..
T Consensus        61 P~~~a~-~l-~~l~l~~g~~VLdiG-~G-tG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~  136 (213)
T d1dl5a1          61 PSLMAL-FM-EWVGLDKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGY  136 (213)
T ss_dssp             HHHHHH-HH-HHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred             chhhHH-HH-HhhhccccceEEEec-Cc-cchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchH
Confidence            344444 33 678899999999999 44 48899999998764  79999776653 3    34555554332  22111


Q ss_pred             hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +.... .+++|+|+.+.+-.......++.|+|||++|..-
T Consensus       137 ~~~~~-~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~pv  175 (213)
T d1dl5a1         137 YGVPE-FSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (213)
T ss_dssp             GCCGG-GCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             Hcccc-ccchhhhhhhccHHHhHHHHHHhcCCCcEEEEEE
Confidence            11111 1359999988776545577889999999998753

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.00023  Score=59.26  Aligned_cols=75  Identities=24%  Similarity=0.323  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce--eeeCCChhHHHHhc---CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ--AVDYSSKDIELAIK---GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~--v~~~~~~~~~~~i~---g~~D~vid~~g  246 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.  +...+++...  ..|..+.+..+.+.   |++|+++++.|
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg   85 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccc
Confidence            68999999999999999999999999999999887664  4455555433  33544543333332   66999999988


Q ss_pred             Cc
Q 017901          247 AP  248 (364)
Q Consensus       247 ~~  248 (364)
                      ..
T Consensus        86 ~~   87 (244)
T d1pr9a_          86 VA   87 (244)
T ss_dssp             CC
T ss_pred             cc
Confidence            63

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.51  E-value=0.00025  Score=59.24  Aligned_cols=98  Identities=19%  Similarity=0.251  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChh----HHHHhc---CCccEEEE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKD----IELAIK---GKFDAVLD  243 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~----~~~~i~---g~~D~vid  243 (364)
                      -.|+++||+||++++|.+.++.+...|++|+.+.++++. +.+++.+...+ .|..+.+    +.+.+.   |++|++++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn   82 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   82 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            368999999999999999999999999999999887665 66677676432 3444432    222222   66999999


Q ss_pred             CCCCchh-------------------------HHHHHhhccC--CCEEEEEccC
Q 017901          244 TIGAPET-------------------------ERLGLNFLKR--GGHYMTLHGE  270 (364)
Q Consensus       244 ~~g~~~~-------------------------~~~~~~~l~~--~G~~v~~g~~  270 (364)
                      +.|....                         .+.+++.|++  +|++|.++..
T Consensus        83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~  136 (248)
T d2d1ya1          83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASV  136 (248)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccc
Confidence            9885210                         2555666643  6899988865

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.47  E-value=0.00029  Score=58.63  Aligned_cols=74  Identities=26%  Similarity=0.287  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce--eeeCCChhHHHHh-c--CCccEEEECCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ--AVDYSSKDIELAI-K--GKFDAVLDTIG  246 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~--v~~~~~~~~~~~i-~--g~~D~vid~~g  246 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++++.  +..++++...  ..|..+.+..+.+ .  |++|+++++.|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            58999999999999999999999999999999887654  4445554332  2344444333322 2  66999999988


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        84 ~   84 (242)
T d1cyda_          84 L   84 (242)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.45  E-value=0.00025  Score=58.99  Aligned_cols=74  Identities=19%  Similarity=0.273  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCChh----HHHHhc---CCccEEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSKD----IELAIK---GKFDAVLD  243 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~~----~~~~i~---g~~D~vid  243 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.  +...++++.. ..|..+.+    +.+.+.   |++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            57899999999999999999999999999999887664  4456666543 23444432    222222   66999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.|.
T Consensus        84 nAG~   87 (242)
T d1ulsa_          84 YAGI   87 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9885

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.44  E-value=0.00056  Score=57.12  Aligned_cols=97  Identities=25%  Similarity=0.382  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H----HHHHcCCce---eeeCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D----RVLAAGAEQ---AVDYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~----~~~~~g~~~---v~~~~~~~----~~~~i~---g~  237 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.  +    +..+.|...   ..|..+++    +.+.+.   |+
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999887653  2    224445432   23444432    222222   66


Q ss_pred             ccEEEECCCCchh-------------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          238 FDAVLDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      +|+++++.|....                         .+.+++.|+  .+|++|.++..
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            9999999885311                         255666674  45799988753

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.37  E-value=0.00021  Score=60.00  Aligned_cols=74  Identities=18%  Similarity=0.272  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      +|++++|+||++++|.++++.+...|++|+.+.++++.  +.+.++|...   ..|.++++    +.+.+.   |++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            57899999999999999999999999999999887664  5567777543   23444432    222222   669999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      +++.|.
T Consensus        84 VnnAg~   89 (256)
T d1k2wa_          84 VNNAAL   89 (256)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            999885

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.36  E-value=0.00044  Score=57.20  Aligned_cols=93  Identities=28%  Similarity=0.329  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeC--CChh----HHHHhc-----CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDY--SSKD----IELAIK-----GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~--~~~~----~~~~i~-----g~~D~vi  242 (364)
                      .|++|||+||++++|.++++.+...|++|+.+.+.+....    ........  ...+    +...+.     +++|+++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lI   76 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL   76 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEE
Confidence            4789999999999999999999999999998866544311    01111111  1111    111111     3599999


Q ss_pred             ECCCCch---h-----------------------HHHHHhhccCCCEEEEEccC
Q 017901          243 DTIGAPE---T-----------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       243 d~~g~~~---~-----------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++.|...   .                       .+.++..++++|++|.++..
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~  130 (236)
T d1dhra_          77 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  130 (236)
T ss_dssp             ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             ECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence            9988410   1                       25566778999999999865

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.35  E-value=0.00025  Score=59.40  Aligned_cols=97  Identities=18%  Similarity=0.321  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.  +.+++++...   ..|..+.+    +.+.+.   |++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            58999999999999999999999999999999887664  4456666432   23444432    222222   669999


Q ss_pred             EECCCCchh-------------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          242 LDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      +++.|....                         .+.+++.++  .+|++|.++..
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~  139 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSA  139 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccc
Confidence            999885311                         244444433  46999999865

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.33  E-value=0.00032  Score=58.38  Aligned_cols=97  Identities=18%  Similarity=0.176  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~v  241 (364)
                      .|++++|+||++++|.+.++.+...|++|+.+.++++.  +...+++-..   ..|..+.+    +.+.+.   |++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            67999999999999999999999999999999887664  4455555322   23444432    222222   569999


Q ss_pred             EECCCCchh-------------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          242 LDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      +++.|....                         .+.++..+.  .+|++|.++..
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~  140 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSI  140 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccc
Confidence            999986311                         134444443  56899999865

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.32  E-value=0.00033  Score=58.67  Aligned_cols=97  Identities=22%  Similarity=0.394  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceee---eCCChh----HHHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAV---DYSSKD----IELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~---~~~~~~----~~~~i~---g~~D~v  241 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.  +...+++.....   |..+.+    +.+.+.   |++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            68899999999999999999999999999999887654  456677654322   333332    222222   669999


Q ss_pred             EECCCCchh-------------------------HHHHHhhcc-CCCEEEEEccC
Q 017901          242 LDTIGAPET-------------------------ERLGLNFLK-RGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~~-------------------------~~~~~~~l~-~~G~~v~~g~~  270 (364)
                      +++.|....                         .+.++..|+ .+|++|.++..
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            999985311                         245566665 57999999865

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00056  Score=57.06  Aligned_cols=97  Identities=23%  Similarity=0.357  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCcee--eeCCChh----HHHHhc---CCccEEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQA--VDYSSKD----IELAIK---GKFDAVL  242 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~~v--~~~~~~~----~~~~i~---g~~D~vi  242 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++. + ..++++....  .|.++.+    +.+.+.   |++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999999999999999887764 3 3445443322  3444432    222222   6699999


Q ss_pred             ECCCCch---h-----------------------HHHHHhhccC-CCEEEEEccC
Q 017901          243 DTIGAPE---T-----------------------ERLGLNFLKR-GGHYMTLHGE  270 (364)
Q Consensus       243 d~~g~~~---~-----------------------~~~~~~~l~~-~G~~v~~g~~  270 (364)
                      ++.|...   .                       .+.++..|+. +|++|.++..
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            9988420   1                       2445555543 5899988754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.29  E-value=0.001  Score=56.21  Aligned_cols=97  Identities=24%  Similarity=0.321  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH-----HHHHHcCCcee---eeCCCh-hH---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-----DRVLAAGAEQA---VDYSSK-DI---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~-----~~~~~~g~~~v---~~~~~~-~~---~~~i~---g~  237 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++. +.     +.+++.+.+..   .|..+. +.   .+.+.   |+
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            479999999999999999999999999999886653 22     23456665432   233332 22   22222   56


Q ss_pred             ccEEEECCCCchh-------------------------HHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPET-------------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~~-------------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+++.+.|....                         .+.++..|..+|+++.++..
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~  154 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  154 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence            9999999886311                         36777888889999988754

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.27  E-value=0.00066  Score=56.52  Aligned_cols=97  Identities=14%  Similarity=0.192  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCce---eeeCCChh----HHHHhc---CCccE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFDA  240 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~  240 (364)
                      .|++++|+||++++|.+.++.+...|++|+.+.+++..   ..+++.|...   ..|.++.+    +.+.+.   |++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999776543   4456676542   22444432    222222   66999


Q ss_pred             EEECCCCchh-------------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          241 VLDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       241 vid~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      ++++.|....                         .+.+++.|+  .+|++|.++..
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~  140 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTST  140 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccc
Confidence            9999886311                         244555553  45899988864

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.26  E-value=0.00032  Score=59.58  Aligned_cols=74  Identities=26%  Similarity=0.313  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCChhH----HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSKDI----ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~~~----~~~i~---g~~D~v  241 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++++.  +...+++...   ..|..+.+.    .+.+.   |++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            58999999999999999999999999999999887664  4456666432   224444322    22221   569999


Q ss_pred             EECCCC
Q 017901          242 LDTIGA  247 (364)
Q Consensus       242 id~~g~  247 (364)
                      +++.|.
T Consensus        84 vnnAG~   89 (276)
T d1bdba_          84 IPNAGI   89 (276)
T ss_dssp             ECCCCC
T ss_pred             cccccc
Confidence            999873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.25  E-value=0.00064  Score=57.34  Aligned_cols=74  Identities=19%  Similarity=0.321  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc---ee--eeCCCh-hH---HHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE---QA--VDYSSK-DI---ELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~---~v--~~~~~~-~~---~~~i~---g~~D  239 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.  +.+.+++..   ..  .|..+. +.   .+.+.   |++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            68999999999999999999999999999999887654  344555432   12  243443 22   22222   6699


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      +++++.|.
T Consensus        85 ~lVnnAG~   92 (268)
T d2bgka1          85 IMFGNVGV   92 (268)
T ss_dssp             EEEECCCC
T ss_pred             eecccccc
Confidence            99999884

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.0006  Score=57.75  Aligned_cols=96  Identities=20%  Similarity=0.274  Sum_probs=64.9

Q ss_pred             CCEE-EEEcCCchHHHHHHHH-HHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChh----HHHHhc---CC
Q 017901          175 GQRL-LVLGGGGAVGFAAVQF-SVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKD----IELAIK---GK  237 (364)
Q Consensus       175 g~~v-li~g~~g~~G~~~~~~-a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~  237 (364)
                      |++| ||+||++++|+++++. ++..|++|+.+++++++     +.+++.+...   ..|.++.+    +.+.+.   |+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            5666 8999999999988865 55568999999998764     2234444332   23444432    233332   66


Q ss_pred             ccEEEECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|++|++.|-..                         ..+.++..|++.|++|.++..
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            999999988520                         135667788899999988753

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.23  E-value=0.0007  Score=56.76  Aligned_cols=97  Identities=23%  Similarity=0.291  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH-----HHHHHcCCcee---eeCCCh-h---HHHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-----DRVLAAGAEQA---VDYSSK-D---IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~-----~~~~~~g~~~v---~~~~~~-~---~~~~i~---g~  237 (364)
                      .|+++||+||++++|.+.++.+...|++|+...+++ +.     +.+++.|.+..   .|..+. +   +.+.+.   |+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999998875543 21     34566675432   233332 2   222222   56


Q ss_pred             ccEEEECCCCchh-------------------------HHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPET-------------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~~-------------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+++.+.|....                         .+.++..++.+|.++.+...
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~  142 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI  142 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccc
Confidence            9999999986411                         36777788888888877654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.19  E-value=0.00048  Score=57.19  Aligned_cols=97  Identities=23%  Similarity=0.326  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCcee---eeCCChh-H---HHHhc---CCccEE
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA---VDYSSKD-I---ELAIK---GKFDAV  241 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v---~~~~~~~-~---~~~i~---g~~D~v  241 (364)
                      .|+++||+||++++|.+.++-+...|++|+.+.++++.  +..++++....   .|.++++ .   .+.+.   |++|+.
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            68999999999999999999999999999999888764  55677775432   2444432 2   22222   669999


Q ss_pred             EECCCCchh-------------------------HHHHHhhccCCCEEEEEccC
Q 017901          242 LDTIGAPET-------------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g~~~~-------------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.+.|....                         .+..+..++.++.++..+..
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~  137 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  137 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence            998775311                         25566777888877766643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00083  Score=56.14  Aligned_cols=97  Identities=19%  Similarity=0.323  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC----Cce----eeeCCChh----HHHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG----AEQ----AVDYSSKD----IELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g----~~~----v~~~~~~~----~~~~i~---g  236 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+.  +...++.    ...    ..|.++.+    +.+.+.   |
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999887654  2333321    111    22444432    222222   6


Q ss_pred             CccEEEECCCCch--h---------------HHHHHhhccC-----CCEEEEEccC
Q 017901          237 KFDAVLDTIGAPE--T---------------ERLGLNFLKR-----GGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~~--~---------------~~~~~~~l~~-----~G~~v~~g~~  270 (364)
                      ++|+++++.|...  .               ...++..|++     +|++|.++..
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence            6999999998631  1               2344455532     5889998865

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.0027  Score=53.03  Aligned_cols=100  Identities=18%  Similarity=0.162  Sum_probs=66.6

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHH----HcC---CceeeeCCChhHHHH-h-
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVL----AAG---AEQAVDYSSKDIELA-I-  234 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~----~~g---~~~v~~~~~~~~~~~-i-  234 (364)
                      ...++++||++||=.|  .+.|.++..+|+..|.  +|+++..+++. +.++    .++   .+.+... ..+..+. . 
T Consensus        89 i~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~-~~d~~~~~~~  165 (264)
T d1i9ga_          89 VHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV-VSDLADSELP  165 (264)
T ss_dssp             HHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE-CSCGGGCCCC
T ss_pred             HHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEE-eccccccccc
Confidence            3678999999999998  3469999999999864  89999766553 4332    221   2222111 1111111 1 


Q ss_pred             cCCccEEEECCCCc-hhHHHHHhhccCCCEEEEEcc
Q 017901          235 KGKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       235 ~g~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .+.+|.||--...+ ..+..+.+.|+|||+++.+-.
T Consensus       166 ~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P  201 (264)
T d1i9ga_         166 DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  201 (264)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEeC
Confidence            13499877666664 578899999999999998864

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.18  E-value=0.0015  Score=54.48  Aligned_cols=97  Identities=23%  Similarity=0.346  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCceee--eCCChh----HHHHhc---CC
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQAV--DYSSKD----IELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v~--~~~~~~----~~~~i~---g~  237 (364)
                      .|+++||+||+|  ++|.+.++.+...|++|+...++++. +    .....+....+  |..+.+    +.+.+.   |+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            689999999877  79999999999999999888777653 2    22334433333  333332    222222   66


Q ss_pred             ccEEEECCCCchh-----------------------------HHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPET-----------------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~~-----------------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+++++.|....                             .+.+...++++|++|.++..
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~  148 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYY  148 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeeh
Confidence            9999999875200                             13445567788999988754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.18  E-value=0.00075  Score=55.68  Aligned_cols=92  Identities=23%  Similarity=0.294  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCC--h----h----HHHHhc-CCccEEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSS--K----D----IELAIK-GKFDAVLD  243 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~--~----~----~~~~i~-g~~D~vid  243 (364)
                      +.+|||+||++++|.+.++.+...|++|+.+.++++...    .....+....  .    .    ...... |++|++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin   77 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   77 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence            346899999999999999999999999999987654310    0001111111  0    0    111111 56999999


Q ss_pred             CCCCch---h-----------------------HHHHHhhccCCCEEEEEccC
Q 017901          244 TIGAPE---T-----------------------ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       244 ~~g~~~---~-----------------------~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.|...   .                       .+.++..++++|+++.++..
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~  130 (235)
T d1ooea_          78 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  130 (235)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence            988410   1                       25666788899999999854

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.14  E-value=0.00055  Score=55.93  Aligned_cols=108  Identities=18%  Similarity=0.178  Sum_probs=70.9

Q ss_pred             ccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC--c--eeeeCCCh-
Q 017901          155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA--E--QAVDYSSK-  228 (364)
Q Consensus       155 ~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~--~--~v~~~~~~-  228 (364)
                      +..+.+.|. .+ +...+++|++||-.| +| .|+.++.+|+. +.+|+++...++. +.+++.-.  .  .++..+.. 
T Consensus        53 ~~~p~~~a~-ml-~~L~l~~g~~VLdIG-~G-sGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~  127 (224)
T d1vbfa_          53 TTALNLGIF-ML-DELDLHKGQKVLEIG-TG-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL  127 (224)
T ss_dssp             ECCHHHHHH-HH-HHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG
T ss_pred             eehhhhHHH-HH-HHhhhcccceEEEec-CC-CCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhh
Confidence            333444554 34 678899999999999 33 68888877775 6799999877765 44433311  1  12222211 


Q ss_pred             hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .+.+  .+++|.|+-+.+-+......++.|++||++|...+
T Consensus       128 g~~~--~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pvg  166 (224)
T d1vbfa_         128 GYEE--EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (224)
T ss_dssp             CCGG--GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             cchh--hhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEEEc
Confidence            1222  14599998776666566778899999999998643

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.14  E-value=0.00069  Score=56.54  Aligned_cols=74  Identities=23%  Similarity=0.340  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc---ee--eeCCChh----HHHHhc---CCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE---QA--VDYSSKD----IELAIK---GKFD  239 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~---~v--~~~~~~~----~~~~i~---g~~D  239 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.  +...+++..   ..  .|..+.+    +.+.+.   |++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            58999999999999999999999999999999887654  334444421   12  2444432    222222   6699


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      +++++.|.
T Consensus        85 iLVnnAg~   92 (251)
T d1zk4a1          85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999886

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.00058  Score=57.14  Aligned_cols=75  Identities=19%  Similarity=0.322  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~  238 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.     +.+++.|...   ..|.++++    +.+.+.   |++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999887653     2345555432   22334432    222222   669


Q ss_pred             cEEEECCCCc
Q 017901          239 DAVLDTIGAP  248 (364)
Q Consensus       239 D~vid~~g~~  248 (364)
                      |+++++.|..
T Consensus        90 DilvnnAG~~   99 (255)
T d1fmca_          90 DILVNNAGGG   99 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             CEeeeCCcCC
Confidence            9999998863

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.14  E-value=0.0011  Score=54.57  Aligned_cols=72  Identities=17%  Similarity=0.259  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee-eeCCCh--hHHHHhcCCccEEEECCCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA-VDYSSK--DIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v-~~~~~~--~~~~~i~g~~D~vid~~g~~  248 (364)
                      +|+++||+||++++|.+.++.+...|++|+.+.++++  .+++.+...+ .|.++.  .+.+.. |++|+++++.|..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~--~l~~~~~~~~~~Dv~~~~~~~~~~~-g~iD~lVnnAG~~   77 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE--LLKRSGHRYVVCDLRKDLDLLFEKV-KEVDILVLNAGGP   77 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH--HHHHTCSEEEECCTTTCHHHHHHHS-CCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH--HHHhcCCcEEEcchHHHHHHHHHHh-CCCcEEEeccccc
Confidence            5789999999999999999999999999999987654  3445554432 232221  222222 5699999998853

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00052  Score=57.09  Aligned_cols=76  Identities=18%  Similarity=0.241  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCc-eeeeCCChhHHHHhc---CCccEEEECCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAE-QAVDYSSKDIELAIK---GKFDAVLDTIG  246 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~-~v~~~~~~~~~~~i~---g~~D~vid~~g  246 (364)
                      -.|+++||+||++++|.+.++.+...|++|+.+.++++. +.+ +..+.. .+.|....+..+...   +++|+++++.|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            368999999999999999999999999999999887654 333 333332 233444444444333   45999999988


Q ss_pred             Cc
Q 017901          247 AP  248 (364)
Q Consensus       247 ~~  248 (364)
                      ..
T Consensus        84 ~~   85 (245)
T d2ag5a1          84 FV   85 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            63

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.11  E-value=0.00082  Score=56.38  Aligned_cols=97  Identities=20%  Similarity=0.275  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~  238 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++++.     +.+++.|.+.   ..|..+.+    +.+.+.   |++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999887653     2334455432   23444432    222222   669


Q ss_pred             cEEEECCCCch----h----------------------HHHHHhhc--cCCCEEEEEccC
Q 017901          239 DAVLDTIGAPE----T----------------------ERLGLNFL--KRGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~----~----------------------~~~~~~~l--~~~G~~v~~g~~  270 (364)
                      |+++++.|...    .                      .+.+++.+  +.+|++|.++..
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~  143 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASM  143 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeech
Confidence            99999988421    1                      24444444  567999999854

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.0011  Score=55.06  Aligned_cols=97  Identities=20%  Similarity=0.246  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~  238 (364)
                      .|++++|+||++++|...+..+...|++|+.+.++++.     +.+.+.|...   ..|.++.+    +.+.+.   |++
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999887653     2345555432   23444432    222222   669


Q ss_pred             cEEEECCCCchh-------------------------HHHHHhhccC--CCEEEEEccC
Q 017901          239 DAVLDTIGAPET-------------------------ERLGLNFLKR--GGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~~-------------------------~~~~~~~l~~--~G~~v~~g~~  270 (364)
                      |+++++.|....                         .+.+++.+..  .|++|.++..
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~  144 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASA  144 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecc
Confidence            999999986411                         2445555543  4789988765

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.09  E-value=0.0026  Score=48.88  Aligned_cols=76  Identities=21%  Similarity=0.285  Sum_probs=56.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEEC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT  244 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~  244 (364)
                      +...--.+.+++|.| +|.+|.++++.+...|++ ++.+.|+.++  +++.++|.. +.++  .++.+.+.. +|+||.|
T Consensus        17 ~~~~~l~~~~ilviG-aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~--~~~~~~l~~-~Divi~a   91 (159)
T d1gpja2          17 RELGSLHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHLAR-SDVVVSA   91 (159)
T ss_dssp             HHHSCCTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHHHT-CSEEEEC
T ss_pred             HHhCCcccCeEEEEC-CCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc--hhHHHHhcc-CCEEEEe
Confidence            333335788999999 699999999999999984 6666776554  567888854 4433  355666666 9999999


Q ss_pred             CCCc
Q 017901          245 IGAP  248 (364)
Q Consensus       245 ~g~~  248 (364)
                      ++++
T Consensus        92 tss~   95 (159)
T d1gpja2          92 TAAP   95 (159)
T ss_dssp             CSSS
T ss_pred             cCCC
Confidence            9976

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.08  E-value=0.001  Score=55.67  Aligned_cols=73  Identities=21%  Similarity=0.280  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChh----HHHHhc---CCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFD  239 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D  239 (364)
                      |+.+||+||++++|.+.++.+...|++|+.+.++++.     +.+++.|...   ..|.++.+    +.+.+.   |++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            6788999999999999999999999999999887653     2345555432   22444432    222222   6699


Q ss_pred             EEEECCCC
Q 017901          240 AVLDTIGA  247 (364)
Q Consensus       240 ~vid~~g~  247 (364)
                      +++++.|.
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999885

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.05  E-value=0.0012  Score=55.35  Aligned_cols=75  Identities=21%  Similarity=0.348  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChhHH----HHhc----CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKDIE----LAIK----GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~~~----~~i~----g~  237 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.     +.+++.+...   ..|.++.+-.    +.+.    |+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999987653     2345555543   2344443322    2221    56


Q ss_pred             ccEEEECCCCc
Q 017901          238 FDAVLDTIGAP  248 (364)
Q Consensus       238 ~D~vid~~g~~  248 (364)
                      +|+++.+.|..
T Consensus        85 idilinnag~~   95 (258)
T d1ae1a_          85 LNILVNNAGVV   95 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             cEEEecccccc
Confidence            89999998864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.04  E-value=0.001  Score=56.14  Aligned_cols=74  Identities=23%  Similarity=0.403  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc--e----eeeCCChh----HHHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE--Q----AVDYSSKD----IELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~--~----v~~~~~~~----~~~~i~---  235 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.     +.+++.+..  .    ..|.++.+    +.+.+.   
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999887653     223444432  1    23444432    222222   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|+++++.|.
T Consensus        84 g~iDilvnnAG~   95 (272)
T d1xkqa_          84 GKIDVLVNNAGA   95 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeCCcc
Confidence            669999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.04  E-value=0.001  Score=55.86  Aligned_cols=75  Identities=19%  Similarity=0.268  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-----HHHHHcCCce---eeeCCChhH----HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-----DRVLAAGAEQ---AVDYSSKDI----ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-----~~~~~~g~~~---v~~~~~~~~----~~~i~---g~  237 (364)
                      .|++++|+||++++|.+.++.+...|++|+.+.++.+ .     +.+++.|...   ..|..+.+-    .+.+.   |+
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5889999999999999999999999999999987643 1     2345566542   224444322    22222   66


Q ss_pred             ccEEEECCCCc
Q 017901          238 FDAVLDTIGAP  248 (364)
Q Consensus       238 ~D~vid~~g~~  248 (364)
                      +|+++++.|..
T Consensus        86 iDiLVnnAG~~   96 (261)
T d1geea_          86 LDVMINNAGLE   96 (261)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEeeccceec
Confidence            99999998863

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.001  Score=54.37  Aligned_cols=95  Identities=21%  Similarity=0.226  Sum_probs=63.5

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HH----HHHcCCc-----e--eeeCCChhHHHHhcC
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DR----VLAAGAE-----Q--AVDYSSKDIELAIKG  236 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~----~~~~g~~-----~--v~~~~~~~~~~~i~g  236 (364)
                      .+++|++||-.|  ++.|+.++.+|+..|  .+|+++...++. +.    +++.+..     .  +...+.......- +
T Consensus        73 ~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~-~  149 (224)
T d1i1na_          73 QLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEE-A  149 (224)
T ss_dssp             TSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGG-C
T ss_pred             ccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchh-h
Confidence            789999999999  346888888998866  489999877664 32    3333322     1  1111111101111 3


Q ss_pred             CccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      ++|.|+.+..-+......++.|++||++|..-
T Consensus       150 ~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~pv  181 (224)
T d1i1na_         150 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  181 (224)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             hhhhhhhhcchhhcCHHHHhhcCCCcEEEEEE
Confidence            49999988776656678899999999998854

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00069  Score=54.57  Aligned_cols=94  Identities=19%  Similarity=0.268  Sum_probs=64.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCCch--
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGAPE--  249 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~~~--  249 (364)
                      .++|+|.||+|.+|..++..+...|.+|++++|+..+ ......++..+ .|..+. ++.+.+.+ +|+||.++|...  
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~-~d~vi~~~g~~~~~   81 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAG-QDAVIVLLGTRNDL   81 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTT-CSEEEECCCCTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcC-CCEEEEEeccCCch
Confidence            4689999999999999999998999999999987654 22223334322 233333 44555667 999999998531  


Q ss_pred             --------hHHHHHhhccCCC--EEEEEcc
Q 017901          250 --------TERLGLNFLKRGG--HYMTLHG  269 (364)
Q Consensus       250 --------~~~~~~~~l~~~G--~~v~~g~  269 (364)
                              .....++.++..|  +++.++.
T Consensus        82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          82 SPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             hhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence                    1234555555543  7787764

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.01  E-value=0.0012  Score=56.18  Aligned_cols=103  Identities=11%  Similarity=0.048  Sum_probs=70.9

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHhcCC
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAIKGK  237 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i~g~  237 (364)
                      +.-+.+++++++|++||=.| + +.|..+..+|+..|++|++++.++++     +.+.+.|....+.....+.. ...++
T Consensus        50 ~~~~~~~l~l~~G~~VLDiG-C-G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~-~~~~~  126 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIG-C-GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE-EFDEP  126 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEET-C-TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGG-GCCCC
T ss_pred             HHHHHHhcCCCCCCEEEEec-C-cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhccc-ccccc
Confidence            34455788999999999999 3 46777889999999999999877764     34566665543322222221 12255


Q ss_pred             ccEEEE-----CCCC----------chhHHHHHhhccCCCEEEEEc
Q 017901          238 FDAVLD-----TIGA----------PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       238 ~D~vid-----~~g~----------~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|.|+.     .++.          +..+..+.++|+|||+++.-.
T Consensus       127 fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         127 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             CSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             cceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            998765     3443          135788999999999998644

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.00  E-value=0.0017  Score=46.71  Aligned_cols=90  Identities=7%  Similarity=0.049  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCceee-eCCChhHHHHhcCCccEEEECCCCch
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQAV-DYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~v~-~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      .|++|+|.| +|.+|..-++.+...|++|+.+......   .++.+-+....- .++..+    +.+ +++|+.+++...
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~d----l~~-~~lv~~at~d~~   84 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL----LDS-CWLAIAATDDDT   84 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGG----GTT-CSEEEECCSCHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHH----hCC-CcEEeecCCCHH
Confidence            478999999 8999999999999999999888654433   222222222111 122222    224 999999999985


Q ss_pred             hHHHHHhhccCCCEEEEEcc
Q 017901          250 TERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .-.......++.|.+|.+..
T Consensus        85 ~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          85 VNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             HHHHHHHHHHHTTCEEEETT
T ss_pred             HHHHHHHHHHHcCCEEEeCC
Confidence            55677788889999988764

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.0047  Score=47.13  Aligned_cols=102  Identities=19%  Similarity=0.108  Sum_probs=74.9

Q ss_pred             HHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHH-HHHcCCceeeeCCChhHHHHhcCCc
Q 017901          161 TAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       161 ta~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~i~g~~  238 (364)
                      +.+.++.+..+ .-.|++++|.| .|-+|...++.++.+|++|+++...+.+.+ +.--|+. +.     .+.+.+.. .
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~-v~-----~~~~a~~~-a   80 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE-VT-----TMDEACQE-G   80 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHTTT-C
T ss_pred             hHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE-ee-----ehhhhhhh-c
Confidence            44555544333 46899999999 999999999999999999999977665533 3333443 22     23334433 8


Q ss_pred             cEEEECCCCch-hHHHHHhhccCCCEEEEEccC
Q 017901          239 DAVLDTIGAPE-TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |+++-|+|... .-.+-++.|+++..+..+|..
T Consensus        81 divvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghf  113 (163)
T d1li4a1          81 NIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHF  113 (163)
T ss_dssp             SEEEECSSCSCSBCHHHHTTCCTTEEEEECSSS
T ss_pred             cEEEecCCCccchhHHHHHhccCCeEEEEeccc
Confidence            99999999853 446888999999999988865

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.99  E-value=0.0013  Score=55.47  Aligned_cols=74  Identities=23%  Similarity=0.415  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc--e----eeeCCChh----HHHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE--Q----AVDYSSKD----IELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~--~----v~~~~~~~----~~~~i~---  235 (364)
                      .|++++|+||++++|.+.++.+...|++|+.+.++++.     +.+.+.+..  .    ..|..+.+    +.+.+.   
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999999887653     234444432  1    23444432    222222   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|+++++.|.
T Consensus        83 G~iDilVnnAG~   94 (274)
T d1xhla_          83 GKIDILVNNAGA   94 (274)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeeccc
Confidence            669999999874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.001  Score=56.97  Aligned_cols=75  Identities=19%  Similarity=0.238  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc--------CCce---eeeCCChh----HHHHhc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA--------GAEQ---AVDYSSKD----IELAIK  235 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~--------g~~~---v~~~~~~~----~~~~i~  235 (364)
                      -.|+++||+||++++|.++++.+...|++|+.+.++.+.  +.+.++        +...   ..|.++.+    +.+.+.
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999999887653  222222        2221   12334332    222222


Q ss_pred             ---CCccEEEECCCC
Q 017901          236 ---GKFDAVLDTIGA  247 (364)
Q Consensus       236 ---g~~D~vid~~g~  247 (364)
                         |++|+++++.|.
T Consensus        90 ~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          90 DTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCeEEEEeeccc
Confidence               669999999885

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.002  Score=53.86  Aligned_cols=76  Identities=22%  Similarity=0.307  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCc-ee----eeCCChh----HHHHhc---
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAE-QA----VDYSSKD----IELAIK---  235 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~-~v----~~~~~~~----~~~~i~---  235 (364)
                      -+|+++||+||++++|.+.++.+...|++|+.+.++++.  +   .+++.+.. .+    .|..+++    +.+.+.   
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999887653  2   23444432 22    2444432    222222   


Q ss_pred             CCccEEEECCCCc
Q 017901          236 GKFDAVLDTIGAP  248 (364)
Q Consensus       236 g~~D~vid~~g~~  248 (364)
                      |++|++|++.|..
T Consensus        88 g~iD~lVnnAg~~  100 (257)
T d1xg5a_          88 SGVDICINNAGLA  100 (257)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCCCEEEeccccc
Confidence            5699999998863

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.97  E-value=0.0012  Score=55.38  Aligned_cols=74  Identities=22%  Similarity=0.353  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH----HHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR----VLAAGAEQ---AVDYSSKD-I---ELAIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~----~~~~g~~~---v~~~~~~~-~---~~~i~---g~  237 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++++.  +.    .++.|...   ..|.++.+ .   .+.+.   |+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999876542  22    24445432   23444432 2   22222   66


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|+++++.|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999884

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.96  E-value=0.00035  Score=57.17  Aligned_cols=107  Identities=21%  Similarity=0.285  Sum_probs=65.1

Q ss_pred             hHHHHHHHHHH-hcccCCCCEEEEEcCCchHHHHHHHHHHHc---C----CeEEEeeCCccH-HHHHH---------cCC
Q 017901          158 AALTAWRALKC-AARMSEGQRLLVLGGGGAVGFAAVQFSVAS---G----CHVSATCGSKSI-DRVLA---------AGA  219 (364)
Q Consensus       158 ~~~ta~~~l~~-~~~~~~g~~vli~g~~g~~G~~~~~~a~~~---g----~~vi~~~~~~~~-~~~~~---------~g~  219 (364)
                      +.+.|. .+.. ...+++|++||..|+  +.|+.++.+++..   |    .+|+++...++. +.+++         .+.
T Consensus        64 P~~~a~-~l~~L~~~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~  140 (223)
T d1r18a_          64 PHMHAF-ALEYLRDHLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS  140 (223)
T ss_dssp             HHHHHH-HHHHTTTTCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHH-HHHHHhhccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCc
Confidence            444554 3322 237899999999994  3577776666654   3    389999777654 33221         222


Q ss_pred             cee--eeCCChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901          220 EQA--VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       220 ~~v--~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      ..+  +..+..+.... .+++|.|+-+.+-+..-...++.|++||++|..-
T Consensus       141 ~nv~~~~~d~~~~~~~-~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pv  190 (223)
T d1r18a_         141 GQLLIVEGDGRKGYPP-NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  190 (223)
T ss_dssp             TSEEEEESCGGGCCGG-GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cEEEEEeccccccccc-ccceeeEEEEeechhchHHHHHhcCCCcEEEEEE
Confidence            222  22221111111 1359998887776655678899999999998753

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.96  E-value=0.0014  Score=54.76  Aligned_cols=97  Identities=22%  Similarity=0.321  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce---eeeCCChh----HHHHhc---C-C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ---AVDYSSKD----IELAIK---G-K  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~---v~~~~~~~----~~~~i~---g-~  237 (364)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.  +   .+.+.|...   ..|.++.+    +.+.+.   + +
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999887653  2   234445432   23444432    222221   3 6


Q ss_pred             ccEEEECCCCchh-------------------------HHHHHhhc--cCCCEEEEEccC
Q 017901          238 FDAVLDTIGAPET-------------------------ERLGLNFL--KRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~~-------------------------~~~~~~~l--~~~G~~v~~g~~  270 (364)
                      +|+++++.|....                         .+.++..+  +.+|++|.++..
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~  146 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV  146 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccc
Confidence            9999999885311                         24455555  456899998864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.96  E-value=0.00093  Score=56.18  Aligned_cols=74  Identities=22%  Similarity=0.333  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc--e----eeeCCChhH----HHHhc---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE--Q----AVDYSSKDI----ELAIK---  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~--~----v~~~~~~~~----~~~i~---  235 (364)
                      .|+.+||+||++++|.+.++.+...|++|+.+.++++.     +.+++.+..  .    ..|.++.+-    .+.+.   
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            68899999999999999999999999999999887653     223444432  1    234444322    22222   


Q ss_pred             CCccEEEECCCC
Q 017901          236 GKFDAVLDTIGA  247 (364)
Q Consensus       236 g~~D~vid~~g~  247 (364)
                      |++|+++++.|.
T Consensus        84 g~iDilvnnAG~   95 (264)
T d1spxa_          84 GKLDILVNNAGA   95 (264)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEeeccccc
Confidence            669999999884

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.92  E-value=0.0019  Score=55.03  Aligned_cols=75  Identities=16%  Similarity=0.289  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H----HHHHcCCce-e--eeCCChhHHH----Hhc---CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D----RVLAAGAEQ-A--VDYSSKDIEL----AIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~----~~~~~g~~~-v--~~~~~~~~~~----~i~---g~  237 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++++.  +    +..+.|... .  .|..+.+-.+    .+.   ++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            57999999999999999999999999999999887653  2    223334332 2  2333332221    111   56


Q ss_pred             ccEEEECCCCc
Q 017901          238 FDAVLDTIGAP  248 (364)
Q Consensus       238 ~D~vid~~g~~  248 (364)
                      +|+++++.|..
T Consensus       104 iDilvnnAg~~  114 (294)
T d1w6ua_         104 PNIVINNAAGN  114 (294)
T ss_dssp             CSEEEECCCCC
T ss_pred             cchhhhhhhhc
Confidence            99999998853

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.91  E-value=0.00067  Score=56.40  Aligned_cols=99  Identities=17%  Similarity=0.135  Sum_probs=65.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HHH----HHcC-CceeeeCCChhHHHHhc-CCc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DRV----LAAG-AEQAVDYSSKDIELAIK-GKF  238 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~~----~~~g-~~~v~~~~~~~~~~~i~-g~~  238 (364)
                      ..++++||++||=.|+ | .|.++..+|+..|  .+|+++..+++. +.+    ++.+ .+.+ .....++.+.+. +.+
T Consensus        79 ~~l~i~pG~rVLEiG~-G-sG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~Di~~~~~~~~f  155 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGV-G-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDIADFISDQMY  155 (250)
T ss_dssp             --CCCCTTCEEEEECC-T-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCTTTCCCSCCE
T ss_pred             HHcCCCCcCEEEEeee-e-CcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEeeeeccccccee
Confidence            5689999999999983 3 4788888888865  489999877653 443    3333 2222 111122222222 349


Q ss_pred             cEEEECCCCc-hhHHHHHhhccCCCEEEEEcc
Q 017901          239 DAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       239 D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      |.||--...+ ..+..+.+.|+|||+++++..
T Consensus       156 D~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         156 DAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             EEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             eeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence            9988655554 578999999999999998753

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.91  E-value=0.0021  Score=53.69  Aligned_cols=97  Identities=22%  Similarity=0.319  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCc-ee----eeCCChh-H---HHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAE-QA----VDYSSKD-I---ELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~-~v----~~~~~~~-~---~~~i~---g  236 (364)
                      .|++++|+||++++|.++++.+...|++|+.+.++++. +    .+.+.+.. .+    .|..+.+ .   .+.+.   |
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999887653 2    22333221 22    2444432 2   22222   6


Q ss_pred             CccEEEECCCCc---h-h----------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          237 KFDAVLDTIGAP---E-T----------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~---~-~----------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      ++|+++++.|..   . .                      .+.++..++  .+|++|.++..
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~  144 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASV  144 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccH
Confidence            699999998732   0 1                      134444443  67899998865

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.90  E-value=0.0012  Score=54.95  Aligned_cols=97  Identities=22%  Similarity=0.268  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChh----HHHHhc---CCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKD----IELAIK---GKF  238 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~  238 (364)
                      .++.+||+||++++|.++++.+...|++|+.+.++++.     +.+++.|...   ..|.++.+    +.+.+.   |++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            47889999999999999999999999999999887653     2334555432   23444432    222222   669


Q ss_pred             cEEEECCCCchh-------------------------HHHHHhhc--cCCCEEEEEccC
Q 017901          239 DAVLDTIGAPET-------------------------ERLGLNFL--KRGGHYMTLHGE  270 (364)
Q Consensus       239 D~vid~~g~~~~-------------------------~~~~~~~l--~~~G~~v~~g~~  270 (364)
                      |+++++.|....                         .+.++..+  +.+|++|.++..
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  147 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSI  147 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCH
Confidence            999998885311                         24445444  456999999865

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.00081  Score=55.78  Aligned_cols=102  Identities=21%  Similarity=0.222  Sum_probs=68.5

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCce---eeeCCChhHHHHh
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQ---AVDYSSKDIELAI  234 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~---v~~~~~~~~~~~i  234 (364)
                      +..|....+++||++||=.|+  +.|..+..+++..|++|+++.-++.. +.    +.+.|...   ....+-.++.  -
T Consensus        22 ~~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~--~   97 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV--A   97 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC--C
T ss_pred             HHHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc--c
Confidence            444667899999999999983  35677888888889999999777653 33    44556432   2222222211  1


Q ss_pred             cCCccEEEEC-----CCC-chhHHHHHhhccCCCEEEEEc
Q 017901          235 KGKFDAVLDT-----IGA-PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       235 ~g~~D~vid~-----~g~-~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      .+++|+|+-.     ... ...+..+.+.|+|||+++...
T Consensus        98 ~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          98 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             cCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            1459998753     222 347788999999999998753

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.87  E-value=0.0023  Score=54.78  Aligned_cols=97  Identities=22%  Similarity=0.335  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc---------cH--H---HHHHcCCceeeeCCChh----HHHHhc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK---------SI--D---RVLAAGAEQAVDYSSKD----IELAIK  235 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~---------~~--~---~~~~~g~~~v~~~~~~~----~~~~i~  235 (364)
                      .|+++||+||++++|.+.++.+...|++|+...++.         ..  +   .....+.....+..+.+    +.+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            589999999999999999999999999999875432         11  1   22334444455554432    222222


Q ss_pred             ---CCccEEEECCCCchh-------------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          236 ---GKFDAVLDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       236 ---g~~D~vid~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                         |++|++|++.|....                         .+.++..|+  .+|++|.++..
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence               669999999885311                         245556563  46899999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.86  E-value=0.0015  Score=54.72  Aligned_cols=97  Identities=21%  Similarity=0.324  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh----HHHHhc----CC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD----IELAIK----GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~----~~~~i~----g~  237 (364)
                      +|+++||+||++++|.++++.+...|++|+.+.++++.  +.   +.+.+...   ..|.++.+    +.+.+.    |+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999887653  22   23333321   23444432    222221    56


Q ss_pred             ccEEEECCCCchh-------------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          238 FDAVLDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      +|+++++.|....                         .+.++..|+  .+|++|.++..
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  146 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSI  146 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccc
Confidence            9999999886311                         244555553  56899988754

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.83  E-value=0.002  Score=53.84  Aligned_cols=97  Identities=16%  Similarity=0.284  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-HH----H-HHcCCcee---eeCCChh----HHHHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DR----V-LAAGAEQA---VDYSSKD----IELAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~~----~-~~~g~~~v---~~~~~~~----~~~~i~---g  236 (364)
                      +|+++||+||++++|.+.++.+...|++|+.+.+++. . +.    + .+.|....   .|..+.+    +.+.+.   |
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5889999999999999999999999999999987643 1 21    2 23343322   2444432    222222   6


Q ss_pred             CccEEEECCCCchh-------------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          237 KFDAVLDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                      ++|+++++.|....                         .+.+++.++  .+|++|.++..
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  143 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA  143 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc
Confidence            69999999885311                         244555554  36899988765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.80  E-value=0.00024  Score=58.91  Aligned_cols=70  Identities=24%  Similarity=0.378  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChh----HHHHhc---CCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD----IELAIK---GKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~----~~~~i~---g~~D~vid~~  245 (364)
                      .|+++||+||++++|.++++.+...|++|+.+.++++. +.+.    ....|..+.+    +.+.+.   |++|+++++.
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   81 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   81 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce----EEEEecCCHHHHHHHHHHHHHhcCCceEEEeee
Confidence            67999999999999999999999999999999887653 2111    1223444432    222222   5699999998


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      |.
T Consensus        82 G~   83 (237)
T d1uzma1          82 GL   83 (237)
T ss_dssp             SC
T ss_pred             cc
Confidence            85

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.76  E-value=0.0018  Score=53.92  Aligned_cols=97  Identities=11%  Similarity=0.138  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHH----HHcCCce----eeeCC-Ch-hHH---HHhc---C
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAEQ----AVDYS-SK-DIE---LAIK---G  236 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~----~~~g~~~----v~~~~-~~-~~~---~~i~---g  236 (364)
                      .|+++||+||++++|.+++..+...|++|+.+.+..+ .+.+    ...+...    ..|.. +. +..   +.+.   |
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999998866543 3222    2222222    22332 22 222   2222   6


Q ss_pred             CccEEEECCCCch--h---------------HHHHHhhcc-----CCCEEEEEccC
Q 017901          237 KFDAVLDTIGAPE--T---------------ERLGLNFLK-----RGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~~--~---------------~~~~~~~l~-----~~G~~v~~g~~  270 (364)
                      ++|+++++.|...  .               .+.+++.+.     ++|++|.++..
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~  139 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEech
Confidence            6999999999631  1               234444442     35889888754

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.75  E-value=0.0023  Score=54.20  Aligned_cols=103  Identities=14%  Similarity=0.071  Sum_probs=68.7

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCceeeeCCChhHHHHhcCC
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQAVDYSSKDIELAIKGK  237 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~v~~~~~~~~~~~i~g~  237 (364)
                      ..-+.++.++++|++||=.|  ++.|..++.+|+..|++|++++.++++ +.+    .+.|-..-+.....++ ..+.++
T Consensus        51 ~~~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~-~~~~~~  127 (285)
T d1kpga_          51 IDLALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW-EQFDEP  127 (285)
T ss_dssp             HHHHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG-GGCCCC
T ss_pred             HHHHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhh-hccccc
Confidence            34455788999999999998  447899999999999999999877764 333    3444322111111111 112245


Q ss_pred             ccEEEE-----CCCCc---hhHHHHHhhccCCCEEEEEc
Q 017901          238 FDAVLD-----TIGAP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       238 ~D~vid-----~~g~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|.|+.     .+|..   ..+..+.++|+|||+++.-.
T Consensus       128 fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         128 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            887765     45433   35778899999999998643

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.74  E-value=0.0028  Score=52.75  Aligned_cols=72  Identities=26%  Similarity=0.374  Sum_probs=50.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce---eeeCCChh----HHHHhc---CCccE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFDA  240 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~  240 (364)
                      +.+||+||++++|.+.++.+...|++|+.+.++++.     +.+++.|...   ..|..+.+    +.+.+.   |++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            346999999999999999999999999999887653     2345555432   23444432    222222   66999


Q ss_pred             EEECCCC
Q 017901          241 VLDTIGA  247 (364)
Q Consensus       241 vid~~g~  247 (364)
                      ++++.|.
T Consensus        82 lVnnAG~   88 (255)
T d1gega_          82 IVNNAGV   88 (255)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999885

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.73  E-value=0.0063  Score=50.46  Aligned_cols=94  Identities=20%  Similarity=0.221  Sum_probs=62.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCce-eeeCCChhHHHHhc-CCccEEEE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQ-AVDYSSKDIELAIK-GKFDAVLD  243 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~-v~~~~~~~~~~~i~-g~~D~vid  243 (364)
                      ..++|++||=.| +| .|.+++.+++ .|++|+++..++.. +.    ++..|... ++..+   ..+... +++|+|+.
T Consensus       117 ~~~~g~~VLDiG-cG-sG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d---~~~~~~~~~fD~V~a  190 (254)
T d2nxca1         117 HLRPGDKVLDLG-TG-SGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGS---LEAALPFGPFDLLVA  190 (254)
T ss_dssp             HCCTTCEEEEET-CT-TSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESC---HHHHGGGCCEEEEEE
T ss_pred             hcCccCEEEEcc-cc-hhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEecc---ccccccccccchhhh
Confidence            367999999998 44 4777776655 68999999766653 33    44555542 33322   222222 45999997


Q ss_pred             CCCCc---hhHHHHHhhccCCCEEEEEccC
Q 017901          244 TIGAP---ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       244 ~~g~~---~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +....   ..+..+.+.|+|||+++..|..
T Consensus       191 ni~~~~l~~l~~~~~~~LkpGG~lilSgil  220 (254)
T d2nxca1         191 NLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             ECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             ccccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence            65543   2456788999999999987754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.71  E-value=0.0043  Score=51.22  Aligned_cols=94  Identities=20%  Similarity=0.318  Sum_probs=63.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH-----HHHHHcCCce---eeeCCChh----HHHHhc---CCccE
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI-----DRVLAAGAEQ---AVDYSSKD----IELAIK---GKFDA  240 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-----~~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~  240 (364)
                      .+||+||++++|.+.++.+...|++|+...+ +++.     +.+++.|...   ..|..+.+    +.+.+.   |++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            6899999999999999999999999988754 4332     2345555432   22444432    222222   66999


Q ss_pred             EEECCCCchh-------------------------HHHHHhhc--cCCCEEEEEccC
Q 017901          241 VLDTIGAPET-------------------------ERLGLNFL--KRGGHYMTLHGE  270 (364)
Q Consensus       241 vid~~g~~~~-------------------------~~~~~~~l--~~~G~~v~~g~~  270 (364)
                      ++++.|....                         .+.+++.|  +.+|++|.++..
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  139 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence            9999885311                         25566666  467999999865

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.68  E-value=0.0015  Score=55.28  Aligned_cols=102  Identities=14%  Similarity=0.100  Sum_probs=67.4

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCceeeeCCChhHHHHhcCC
Q 017901          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAVDYSSKDIELAIKGK  237 (364)
Q Consensus       163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~v~~~~~~~~~~~i~g~  237 (364)
                      +.-+.+..++++|++||=.| +| .|..+..+++..|++|+++..+++. +.    +++.|....+.....+. ....++
T Consensus        41 ~~~~~~~l~l~~g~~VLDiG-CG-~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~-~~~~~~  117 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIG-CG-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW-EDFAEP  117 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEES-CT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG-GGCCCC
T ss_pred             HHHHHHHcCCCCCCEEEEec-CC-chHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhh-hhhccc
Confidence            44455778999999999999 33 4566778898889999999877764 33    34455432221111111 112245


Q ss_pred             ccEEEE-----CCCCc---hhHHHHHhhccCCCEEEEE
Q 017901          238 FDAVLD-----TIGAP---ETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       238 ~D~vid-----~~g~~---~~~~~~~~~l~~~G~~v~~  267 (364)
                      +|.|+.     .++..   ..+..+.++|+|||+++.-
T Consensus       118 fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         118 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             hhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            888854     44433   3577889999999999864

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.0056  Score=46.86  Aligned_cols=97  Identities=16%  Similarity=0.208  Sum_probs=72.1

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      ..+||+....+..|.+..---.|++++|.|.+..+|.-+..++...|++|+.+.+..                  .++.+
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t------------------~~l~~   76 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------------KNLRH   76 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------------SCHHH
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhcccccccccc------------------chhHH
Confidence            456777766676665544445799999999999999999999999999988764322                  12222


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. +|+++-++|.+..+.  .+.++++..++.+|..
T Consensus        77 ~~~~-ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          77 HVEN-ADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             HHHH-CSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             HHhh-hhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence            3333 899999999885543  5688999999999864

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.0041  Score=48.27  Aligned_cols=99  Identities=16%  Similarity=0.231  Sum_probs=60.9

Q ss_pred             HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC---ceeeeCCChhHHHHhcCCc
Q 017901          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA---EQAVDYSSKDIELAIKGKF  238 (364)
Q Consensus       164 ~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~---~~v~~~~~~~~~~~i~g~~  238 (364)
                      ++|.+..-..+|++|+|.| +|+.+.+++..+...|++++.+.|+.++  +++..+..   ...+...  +..  . .++
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~--~~~--~-~~~   80 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD--ELE--G-HEF   80 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG--GGT--T-CCC
T ss_pred             HHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccc--ccc--c-ccc
Confidence            4454444456789999999 7999999999999999997777777654  33333332   1122211  111  1 239


Q ss_pred             cEEEECCCCch---hHHHHHhhccCCCEEEEEc
Q 017901          239 DAVLDTIGAPE---TERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       239 D~vid~~g~~~---~~~~~~~~l~~~G~~v~~g  268 (364)
                      |++|+|+....   ....-...++++..++.+-
T Consensus        81 dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~v  113 (170)
T d1nyta1          81 DLIINATSSGISGDIPAIPSSLIHPGIYCYDMF  113 (170)
T ss_dssp             SEEEECCSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             ceeecccccCcccCCCCCcHHHhccCcEEEEee
Confidence            99999986541   1111234566666666554

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.56  E-value=0.0051  Score=47.53  Aligned_cols=72  Identities=13%  Similarity=0.129  Sum_probs=51.5

Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEE
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAV  241 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~v  241 (364)
                      +| +...+.++++|+|.| +|+.+.+++..++..|+ ++..+.|+.++  .+...++...+-....        .++|++
T Consensus         8 ~l-~~~~~~~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~--------~~~Dli   77 (167)
T d1npya1           8 LI-EKYHLNKNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLEN--------QQADIL   77 (167)
T ss_dssp             HH-HHTTCCTTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTT--------CCCSEE
T ss_pred             HH-HHcCCCCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccc--------cchhhh
Confidence            44 456667888999999 79999999999999998 66667777664  4455666543322111        138999


Q ss_pred             EECCC
Q 017901          242 LDTIG  246 (364)
Q Consensus       242 id~~g  246 (364)
                      |+|+.
T Consensus        78 INaTp   82 (167)
T d1npya1          78 VNVTS   82 (167)
T ss_dssp             EECSS
T ss_pred             eeccc
Confidence            99976

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0036  Score=52.57  Aligned_cols=39  Identities=26%  Similarity=0.402  Sum_probs=35.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      -+|+++||+||++++|+++++.+...|++|+.+.++++.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~   50 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKET   50 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            368999999999999999999999999999999998764

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.46  E-value=0.016  Score=44.97  Aligned_cols=90  Identities=23%  Similarity=0.180  Sum_probs=62.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeee-------C---CChhHHHHhcCCccEEEEC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVD-------Y---SSKDIELAIKGKFDAVLDT  244 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~-------~---~~~~~~~~i~g~~D~vid~  244 (364)
                      +++.|.| +|.+|++++..+...|..|....+++++ +.+++.+......       .   ...+..+.+.+ +|++|-|
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-aD~iii~   79 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD-ADVILIV   79 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT-CSEEEEC
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcC-CCEEEEE
Confidence            6899999 7999999999999999999999887665 5565555321110       0   01234555666 9999999


Q ss_pred             CCCc---hhHHHHHhhccCCCEEEEE
Q 017901          245 IGAP---ETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       245 ~g~~---~~~~~~~~~l~~~G~~v~~  267 (364)
                      +...   ..+.+....+.++..++..
T Consensus        80 v~~~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          80 VPAIHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             SCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             EchhHHHHHHHHhhhccCCCCEEEEe
Confidence            9886   2344455566677666554

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.46  E-value=0.0051  Score=50.93  Aligned_cols=73  Identities=15%  Similarity=0.247  Sum_probs=49.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHHcCCce--e--eeCCCh----hHHHHhc---C--Cc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAEQ--A--VDYSSK----DIELAIK---G--KF  238 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~~g~~~--v--~~~~~~----~~~~~i~---g--~~  238 (364)
                      .++|||+||++++|+++++.+...|+  +|+++.++.++ +.+.+.....  +  +|.++.    .+.+.+.   +  ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47899999999999999998888886  68888887765 5554443221  2  244433    2223222   2  38


Q ss_pred             cEEEECCCC
Q 017901          239 DAVLDTIGA  247 (364)
Q Consensus       239 D~vid~~g~  247 (364)
                      |+++++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999984

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.013  Score=44.97  Aligned_cols=97  Identities=15%  Similarity=0.212  Sum_probs=73.2

Q ss_pred             ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (364)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (364)
                      +.+||+....+..|.+..---.|++++|.|.+..+|.-+..++...|++|+.+.+...                  ++.+
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~------------------~l~~   78 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA------------------HLDE   78 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS------------------SHHH
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccc------------------cHHH
Confidence            5567777777777754443458999999999999999999999999999988754322                  2222


Q ss_pred             HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .++. .|+++-++|.+..+.  -++++++-.++.+|..
T Consensus        79 ~~~~-aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          79 EVNK-GDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             HHTT-CSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             HHhh-ccchhhccccccccc--cccccCCCeEeccCcc
Confidence            3333 899999999984443  5689999999999864

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.0047  Score=42.60  Aligned_cols=80  Identities=16%  Similarity=0.278  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      .|++|+|.| .|..|+++++++...|++|++.......   +.+.+ +....+.........   + +|.++-.-|-+ .
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~-~d~vi~SPGi~-~   76 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-AVERHTGSLNDEWLM---A-ADLIVASPGIA-L   76 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-TSCEEESBCCHHHHH---H-CSEEEECTTSC-T
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-ccceeecccchhhhc---c-CCEEEECCCCC-C
Confidence            467899999 8999999999999999999999664432   22222 222223222222222   3 89999988876 3


Q ss_pred             HHHHHhhccC
Q 017901          251 ERLGLNFLKR  260 (364)
Q Consensus       251 ~~~~~~~l~~  260 (364)
                      -+..+..++.
T Consensus        77 ~~~~~~~a~~   86 (93)
T d2jfga1          77 AHPSLSAAAD   86 (93)
T ss_dssp             TSHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            3333333333

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.40  E-value=0.0079  Score=50.33  Aligned_cols=74  Identities=18%  Similarity=0.350  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCceee--eCCCh-hHHH---Hhc---CC
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAV--DYSSK-DIEL---AIK---GK  237 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~v~--~~~~~-~~~~---~i~---g~  237 (364)
                      .|+++||+||+|  ++|.+.++.+...|++|+.+.++++. +.    ..+.+...+.  +...+ +..+   .+.   |+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            589999999776  79999999999999999999887653 22    2233322222  33332 2222   221   56


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|+++.+.|.
T Consensus        84 id~lV~nag~   93 (274)
T d2pd4a1          84 LDFIVHSVAF   93 (274)
T ss_dssp             EEEEEECCCC
T ss_pred             CCeEEeeccc
Confidence            9999999885

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.35  E-value=0.028  Score=42.54  Aligned_cols=101  Identities=16%  Similarity=0.091  Sum_probs=74.6

Q ss_pred             HHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCcc
Q 017901          162 AWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       162 a~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D  239 (364)
                      .+.++.+..+ +-.|++++|.| -|-+|.-.++-+|.+|++|+++..++-+ -.+.--|+. +.     ...+.+.. .|
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~-v~-----~~~~a~~~-aD   80 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV-----TLDEIVDK-GD   80 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC-----CHHHHTTT-CS
T ss_pred             HHHHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCc-cC-----chhHcccc-Cc
Confidence            3444444333 47899999999 9999999999999999999999766654 223333332 22     23444444 89


Q ss_pred             EEEECCCCchh-HHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPET-ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +++-++|..+. -..-++.|+.+..+...|..
T Consensus        81 i~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHf  112 (163)
T d1v8ba1          81 FFITCTGNVDVIKLEHLLKMKNNAVVGNIGHF  112 (163)
T ss_dssp             EEEECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             EEEEcCCCCccccHHHHHHhhCCeEEEecccc
Confidence            99999999754 45779999999999999976

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0079  Score=49.59  Aligned_cols=47  Identities=19%  Similarity=0.249  Sum_probs=40.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE  220 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~  220 (364)
                      +|+++||+||++++|.+.++.+...|++|+.+.++++.  +.+++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999876653  556677654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.29  E-value=0.015  Score=44.57  Aligned_cols=87  Identities=10%  Similarity=0.033  Sum_probs=62.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC-ceeeeCCChhHHHHhcCCccEEEECCCCc---hhH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA-EQAVDYSSKDIELAIKGKFDAVLDTIGAP---ETE  251 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~-~~v~~~~~~~~~~~i~g~~D~vid~~g~~---~~~  251 (364)
                      +|.|.| .|.+|...++.++..|.+|++..++++. +.+.+.|. +...+.     .+.+.. .|+||-|+...   ..+
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~-----~~~~~~-~DiIilavp~~~~~~vl   74 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQD-----LSLLQT-AKIIFLCTPIQLILPTL   74 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESC-----GGGGTT-CSEEEECSCHHHHHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeee-----cccccc-cccccccCcHhhhhhhh
Confidence            588889 8999999998889999999998777654 66778775 333221     123344 99999999754   245


Q ss_pred             HHHHhhccCCCEEEEEccC
Q 017901          252 RLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.....+.++..++.++..
T Consensus        75 ~~l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          75 EKLIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             HHHGGGSCTTCEEEECCSC
T ss_pred             hhhhhhcccccceeecccc
Confidence            5666667777777777643

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.24  E-value=0.0085  Score=47.07  Aligned_cols=98  Identities=15%  Similarity=0.102  Sum_probs=64.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc-e--eeeCCChhHHHHhcCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE-Q--AVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~-~--v~~~~~~~~~~~i~g~~D  239 (364)
                      ....+++|++||=.|+  +.|..++.+|+. +.+|+++..+++.     +.+++.|.. .  ++..+..+..... ..+|
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~-~~~D  102 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDID  102 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEE
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhccccc-CCcC
Confidence            4578899999999983  346667777765 6699999777653     335566653 2  3333322222222 2499


Q ss_pred             EEEECCCCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          240 AVLDTIGAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       240 ~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|+-..+..   ..+..+.+.|+++|+++....
T Consensus       103 ~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~  135 (186)
T d1l3ia_         103 IAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (186)
T ss_dssp             EEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEEEeCccccchHHHHHHHHHhCcCCEEEEEee
Confidence            988765432   357788899999999987653

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0081  Score=51.60  Aligned_cols=100  Identities=23%  Similarity=0.169  Sum_probs=63.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHH----HHcC-----------Cce--eeeCCC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRV----LAAG-----------AEQ--AVDYSS  227 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~----~~~g-----------~~~--v~~~~~  227 (364)
                      ..++++||++||=.| +| .|.++..+|+..|.  +|+++..+++. +.+    ++.+           .+.  +.+.+-
T Consensus        92 ~~l~i~pG~rVLE~G-tG-sG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di  169 (324)
T d2b25a1          92 SMMDINPGDTVLEAG-SG-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  169 (324)
T ss_dssp             HHHTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HHhCCCCCCEEEEec-cc-ccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecch
Confidence            568999999999998 43 59999999999875  89999776653 333    2221           111  111111


Q ss_pred             hhHHHHhc-CCccEEEECCCCc-hhHHHHHhhccCCCEEEEEcc
Q 017901          228 KDIELAIK-GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       228 ~~~~~~i~-g~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .+....+. +.+|.||--...+ ..+..+.+.|+|||+++.+-.
T Consensus       170 ~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P  213 (324)
T d2b25a1         170 SGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  213 (324)
T ss_dssp             TCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             hhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeC
Confidence            11111111 2388877545543 488999999999999998753

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.17  E-value=0.0057  Score=48.17  Aligned_cols=98  Identities=15%  Similarity=0.050  Sum_probs=61.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce------------------eeeCCCh
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ------------------AVDYSSK  228 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~------------------v~~~~~~  228 (364)
                      ....+.+|.+||..| + +.|..+..+|+. |++|+++.-++.. +.+++.....                  .+..+-.
T Consensus        14 ~~l~~~~~~rvLd~G-C-G~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPL-C-GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETT-T-CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEec-C-cCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            445789999999999 3 368888888875 9999999777664 5554421110                  1111111


Q ss_pred             hHHHHhcCCccEEEECCCC--------chhHHHHHhhccCCCEEEEEc
Q 017901          229 DIELAIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       229 ~~~~~i~g~~D~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      ++.....+.+|+|++...-        ...+..+.+.|++||+++...
T Consensus        91 ~l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          91 ALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             ccccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            1111111238999885442        124678889999999977654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.15  E-value=0.026  Score=43.50  Aligned_cols=92  Identities=13%  Similarity=0.063  Sum_probs=63.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCC--ccH-HHHHHcCCceeeeCCCh-------------hHHHHhcCCcc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGS--KSI-DRVLAAGAEQAVDYSSK-------------DIELAIKGKFD  239 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~--~~~-~~~~~~g~~~v~~~~~~-------------~~~~~i~g~~D  239 (364)
                      +|.|.| .|.+|....+.+.... .+++++...  +.. ..+.+.+.+........             ++.....+ +|
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vD   81 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK-VD   81 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT-CS
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc-CC
Confidence            689999 8999999998887654 588888532  222 45566665532211111             11111225 99


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+||+|.......+-..+..|-+.|..+.+
T Consensus        82 vViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~  112 (172)
T d2czca2          82 IIVDATPGGIGAKNKPLYEKAGVKAIFQGGE  112 (172)
T ss_dssp             EEEECCSTTHHHHHHHHHHHHTCEEEECTTS
T ss_pred             EEEECCCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            9999999986778888899999999998875

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.13  E-value=0.014  Score=48.28  Aligned_cols=75  Identities=20%  Similarity=0.363  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCceeeeCCCh---hHHH---Hhc---C
Q 017901          173 SEGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQAVDYSSK---DIEL---AIK---G  236 (364)
Q Consensus       173 ~~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v~~~~~~---~~~~---~i~---g  236 (364)
                      -.|+++||+||++  ++|.+++..+...|++|+.+.++++. +    .....+..........   +...   .+.   +
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            3689999999888  78899999998999999988887653 2    2344444433332221   1111   111   5


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      +.|+.+++.+.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            58999998765

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=96.06  E-value=0.046  Score=41.99  Aligned_cols=92  Identities=15%  Similarity=0.149  Sum_probs=62.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCC-ccH--HHHHHcCCceeeeCCCh-------------hHHHHhcCCcc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGS-KSI--DRVLAAGAEQAVDYSSK-------------DIELAIKGKFD  239 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~-~~~--~~~~~~g~~~v~~~~~~-------------~~~~~i~g~~D  239 (364)
                      +|.|.| .|.+|..+.+++...+ .+++++... +..  ..+...+.+......+.             ++.....+ +|
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~-vD   80 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE-AD   80 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT-CS
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcC-CC
Confidence            688999 9999999999887665 478887432 222  44566665532221111             11111225 99


Q ss_pred             EEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+||+|.-.....+-..+..|-++|..+.+
T Consensus        81 vViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          81 IVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             EEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             EEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            9999999976667777888888888887654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.06  E-value=0.023  Score=41.61  Aligned_cols=70  Identities=16%  Similarity=0.185  Sum_probs=52.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCceee--eCCChhHHHHhc-CCccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAEQAV--DYSSKDIELAIK-GKFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~~v~--~~~~~~~~~~i~-g~~D~vid~~g~~  248 (364)
                      +|+|.| .|.+|...++.+...|..|+++..++++ +.+ .+++.. ++  |..+.++..... ..+|.++.+++++
T Consensus         2 ~IvI~G-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhcChhhhhhhcccCCcH
Confidence            689999 7999999999999999999999887765 444 345654 44  344455555554 3499999999986

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.97  E-value=0.0053  Score=50.75  Aligned_cols=72  Identities=14%  Similarity=0.320  Sum_probs=46.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHH---HcCCeEEEeeCCccH-HHH---HHcCCc-e--eeeCCCh----hHHHHhc-----C
Q 017901          176 QRLLVLGGGGAVGFAAVQFSV---ASGCHVSATCGSKSI-DRV---LAAGAE-Q--AVDYSSK----DIELAIK-----G  236 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~---~~g~~vi~~~~~~~~-~~~---~~~g~~-~--v~~~~~~----~~~~~i~-----g  236 (364)
                      ++|||+||++++|+++++.+.   ..|++|+.+.++++. +.+   .+.+.. .  .+|.++.    .+.+.+.     +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            579999999999999887664   358899999887653 222   222222 2  2243333    2333321     4


Q ss_pred             CccEEEECCCC
Q 017901          237 KFDAVLDTIGA  247 (364)
Q Consensus       237 ~~D~vid~~g~  247 (364)
                      ++|+++++.|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            59999999874

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.96  E-value=0.03  Score=43.37  Aligned_cols=92  Identities=18%  Similarity=0.115  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCc-c-H-HHHHHcCCceeeeCCCh------------hHHHHhcCCccE
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSK-S-I-DRVLAAGAEQAVDYSSK------------DIELAIKGKFDA  240 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~-~-~-~~~~~~g~~~v~~~~~~------------~~~~~i~g~~D~  240 (364)
                      +|.|.| .|.+|..+.+.+...+ .+++++.... . . ..+...+.......+..            ++.....+ +|+
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~-vDi   80 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKT-SDI   80 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHH-CSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhc-CCE
Confidence            588999 9999999999998764 5888885432 2 2 23333333221111110            11222225 999


Q ss_pred             EEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      |+||+|.......+-..++.|-+++..+..
T Consensus        81 ViecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          81 VVDTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             EEECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence            999999876677777888777777776543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.94  E-value=0.017  Score=47.76  Aligned_cols=78  Identities=22%  Similarity=0.259  Sum_probs=51.5

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCcc----H----HHHHHcCCce---eeeCCChhHH----HH
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKS----I----DRVLAAGAEQ---AVDYSSKDIE----LA  233 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~----~----~~~~~~g~~~---v~~~~~~~~~----~~  233 (364)
                      ..++|+.++||+||++++|+++++.+...|++ |+.+.|++.    .    +.+.+.|...   ..|..+.+-.    +.
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence            35788999999999999999999999888995 555555421    1    2335566542   2244443222    22


Q ss_pred             hc--CCccEEEECCCC
Q 017901          234 IK--GKFDAVLDTIGA  247 (364)
Q Consensus       234 i~--g~~D~vid~~g~  247 (364)
                      +.  +++|.++.+.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            22  348999998885

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.85  E-value=0.013  Score=43.03  Aligned_cols=92  Identities=16%  Similarity=0.088  Sum_probs=61.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHHhc-CCccEEEECCCCchhH-
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPETE-  251 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~i~-g~~D~vid~~g~~~~~-  251 (364)
                      ++++|.| .|.+|..+++.+...|..|+++..++++ +.+++.+...++ |..+.+...... ..+|.++-++++.... 
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~   79 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS   79 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhH
Confidence            3578888 8999999999999999999999877665 667777765433 334444444443 2389999988875222 


Q ss_pred             --HHHHhhccCCCEEEEEc
Q 017901          252 --RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       252 --~~~~~~l~~~G~~v~~g  268 (364)
                        -.......+..+++...
T Consensus        80 ~~~~~~~~~~~~~~iiar~   98 (134)
T d2hmva1          80 TLTTLLLKELDIPNIWVKA   98 (134)
T ss_dssp             HHHHHHHHHTTCSEEEEEC
T ss_pred             HHHHHHHHHcCCCcEEeec
Confidence              22333444555666554

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.84  E-value=0.012  Score=48.67  Aligned_cols=71  Identities=14%  Similarity=0.058  Sum_probs=47.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH----cCCceeeeCCC-hhHHHHhc---CCccEEEECCCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA----AGAEQAVDYSS-KDIELAIK---GKFDAVLDTIGA  247 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~----~g~~~v~~~~~-~~~~~~i~---g~~D~vid~~g~  247 (364)
                      ++||+||++++|++.++.+...|++|+...++.+. +.+..    .....+.+..+ ..+.+.+.   |++|+++++.|.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            78999999999999999999999999998776543 33322    22222333322 13333333   669999987663

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.83  E-value=0.015  Score=46.93  Aligned_cols=71  Identities=20%  Similarity=0.182  Sum_probs=47.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccHHHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      .+|||+||+|.+|..+++.+...|.  .|++..++.+.......+...+ .|..+. ++.+.+.+ +|.|+.+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQG-IDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTT-CSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeecccccccccccc-ceeeEEEEee
Confidence            5899999999999999999998886  4666666655422222233322 233333 34445556 9999998764

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.71  E-value=0.023  Score=43.69  Aligned_cols=93  Identities=15%  Similarity=0.213  Sum_probs=63.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCceeeeC--CCh-hHHHHhcCCccEEEECCCCch
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQAVDY--SSK-DIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~~v~~~--~~~-~~~~~i~g~~D~vid~~g~~~  249 (364)
                      +++|+|.| +|.+|..+++.+...|.+|+++.++.++ + ++.+++...+...  ... .....+.. .|.++.+.....
T Consensus         2 ~K~IliiG-aG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~i~~~~~~~   79 (182)
T d1e5qa1           2 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAK-HDLVISLIPYTF   79 (182)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTT-SSEEEECSCGGG
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhc-cceeEeeccchh
Confidence            57899999 6999999999999999999999888776 3 3444443322211  111 23333434 899999888765


Q ss_pred             hHHHHHhhccCCCEEEEEcc
Q 017901          250 TERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .......+++.+..++....
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~   99 (182)
T d1e5qa1          80 HATVIKSAIRQKKHVVTTSY   99 (182)
T ss_dssp             HHHHHHHHHHHTCEEECSSC
T ss_pred             hhHHHHHHHhhccceeeccc
Confidence            55666667777777776654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.66  E-value=0.082  Score=39.47  Aligned_cols=92  Identities=17%  Similarity=0.208  Sum_probs=66.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCcc---H-HHHHHcCCceeeeCCChh---HHHHh------------
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS---I-DRVLAAGAEQAVDYSSKD---IELAI------------  234 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~---~-~~~~~~g~~~v~~~~~~~---~~~~i------------  234 (364)
                      ++|.|.|++|.+|.-+.++.+..  .++|++++-...   + +.++++.+..+.-.+...   +....            
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            78999999999999999999887  468888844333   2 557888887665333221   11111            


Q ss_pred             -----c-CCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901          235 -----K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       235 -----~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~  267 (364)
                           . .++|+++.++.|...+.-.+.+++.|-++.+.
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence                 1 23899999988777999999999999777655

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.63  E-value=0.034  Score=43.43  Aligned_cols=88  Identities=20%  Similarity=0.113  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|.++.|.| .|.+|...+++++.+|.+|++..+..........+...      .++.+.+.. .|+|+-++...+.   
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~------~~l~ell~~-sDiv~~~~Plt~~T~~  114 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIEL------LSLDDLLAR-ADFISVHLPKTPETAG  114 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEE------CCHHHHHHH-CSEEEECCCCSTTTTT
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCcee------ccHHHHHhh-CCEEEEcCCCCchhhh
Confidence            578999999 89999999999999999999998766655555555431      123333333 8999988764321   


Q ss_pred             --HHHHHhhccCCCEEEEEcc
Q 017901          251 --ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~  269 (364)
                        -...++.|+++..+|.++-
T Consensus       115 lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         115 LIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CBCHHHHTTSCTTEEEEECSC
T ss_pred             hhhHHHHhhhCCCceEEEecc
Confidence              2478889999999998874

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.62  E-value=0.024  Score=49.98  Aligned_cols=104  Identities=17%  Similarity=0.180  Sum_probs=66.4

Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHH----Hc-------CC----cee-
Q 017901          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVL----AA-------GA----EQA-  222 (364)
Q Consensus       161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~----~~-------g~----~~v-  222 (364)
                      ...+.+ +..++++|++++=.|  ++.|..+.++|+..|+ +|+++..++.. +.++    ++       |.    ... 
T Consensus       204 ~i~~Il-~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~  280 (406)
T d1u2za_         204 FLSDVY-QQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS  280 (406)
T ss_dssp             HHHHHH-HHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred             HHHHHH-HHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceee
Confidence            345555 678999999998888  5589999999999987 89999776653 3222    11       11    111 


Q ss_pred             e--eCCChhHH-HHhcCCccEEEECCC--Cc---hhHHHHHhhccCCCEEEEEc
Q 017901          223 V--DYSSKDIE-LAIKGKFDAVLDTIG--AP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       223 ~--~~~~~~~~-~~i~g~~D~vid~~g--~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +  +....+.. ..+.. +|+++-..-  .+   ..+....+.|+|||++|..-
T Consensus       281 ~~~~f~~~~~~d~~~~~-adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         281 LKKSFVDNNRVAELIPQ-CDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             ESSCSTTCHHHHHHGGG-CSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             eeechhhcccccccccc-ceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            1  11111222 22224 888875322  12   25678888999999999864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.61  E-value=0.021  Score=44.97  Aligned_cols=90  Identities=20%  Similarity=0.157  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch-h-
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE-T-  250 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~-~-  250 (364)
                      -.|+++.|.| .|.+|...+++++.+|++|++..+..........+....     .++.+.+.. .|+|+-++.... + 
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~-----~~l~~ll~~-sD~i~~~~plt~~T~  119 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRV-----STLQDLLFH-SDCVTLHCGLNEHNH  119 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEEC-----SSHHHHHHH-CSEEEECCCCCTTCT
T ss_pred             eeCceEEEec-cccccccceeeeeccccceeeccCcccccchhhhccccc-----cchhhcccc-CCEEEEeecccccch
Confidence            3578999999 999999999999999999999876554444444444321     123333333 899888776431 1 


Q ss_pred             ---HHHHHhhccCCCEEEEEcc
Q 017901          251 ---ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ---~~~~~~~l~~~G~~v~~g~  269 (364)
                         -...+..|+++..+|.++-
T Consensus       120 ~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         120 HLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             TSBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhhHHHHhccCCCCeEEecCC
Confidence               2467889999999998874

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.57  E-value=0.0088  Score=48.86  Aligned_cols=93  Identities=23%  Similarity=0.282  Sum_probs=65.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCC---
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIG---  246 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g---  246 (364)
                      .++++.+||=.| +| .|..+..+++ .|++|+++..++.. +.+++.+....+..+..++.-. .+++|+|+....   
T Consensus        39 ~~~~~~~vLDiG-cG-~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~~~-~~~fD~ii~~~~~~~  114 (246)
T d2avna1          39 YLKNPCRVLDLG-GG-TGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFP-SGAFEAVLALGDVLS  114 (246)
T ss_dssp             HCCSCCEEEEET-CT-TCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSC-TTCEEEEEECSSHHH
T ss_pred             hcCCCCEEEEEC-CC-Cchhcccccc-cceEEEEeecccccccccccccccccccccccccccc-cccccceeeecchhh
Confidence            456788999888 44 7888888876 59999999877765 7788877766655444332111 145999886543   


Q ss_pred             ---Cc-hhHHHHHhhccCCCEEEEE
Q 017901          247 ---AP-ETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       247 ---~~-~~~~~~~~~l~~~G~~v~~  267 (364)
                         .+ ..+..+.++|++||.++..
T Consensus       115 ~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         115 YVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             HCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhhHHHHHHHHHhhcCcCcEEEEE
Confidence               22 3577888999999988764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.53  E-value=0.014  Score=47.91  Aligned_cols=94  Identities=19%  Similarity=0.289  Sum_probs=61.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCe-------EEEeeCCccH-H----HHHHcCCce---eeeCCChh----HHHHhc--
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCH-------VSATCGSKSI-D----RVLAAGAEQ---AVDYSSKD----IELAIK--  235 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~-------vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~----~~~~i~--  235 (364)
                      .+||+||++++|.+.++.+...|++       |+...++++. +    .+++.|...   ..|.++.+    +.+.+.  
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4799999999999999988888987       6666776543 2    234445432   22444432    222222  


Q ss_pred             -CCccEEEECCCCchh-------------------------HHHHHhhcc--CCCEEEEEccC
Q 017901          236 -GKFDAVLDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGE  270 (364)
Q Consensus       236 -g~~D~vid~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~  270 (364)
                       |++|+++++.|....                         .+.+++.|+  .+|+++.++..
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~  145 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSV  145 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEech
Confidence             669999999885311                         255566664  46899998754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.022  Score=46.09  Aligned_cols=99  Identities=16%  Similarity=0.048  Sum_probs=62.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-----------------------ee
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-----------------------AV  223 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-----------------------v~  223 (364)
                      ....+.++.+||..| +| .|..+..+|+ .|++|+++.-++.. +.+++.....                       .+
T Consensus        39 ~~l~~~~~~rvLd~G-CG-~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPL-CG-KAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETT-CT-TCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeC-CC-CcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678899999998 44 4888888886 59999999776654 4443322111                       01


Q ss_pred             eCCChhHHHHhcCCccEEEECCCC--------chhHHHHHhhccCCCEEEEEcc
Q 017901          224 DYSSKDIELAIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       224 ~~~~~~~~~~i~g~~D~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ..+-.++.....+.+|+|+++.--        ...+..+.++|+|||+++....
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            111111111111448999986432        1256788999999998776653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.47  E-value=0.037  Score=43.64  Aligned_cols=87  Identities=14%  Similarity=0.079  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|++|.|.| .|.+|..++++++.+|++|++.......... ..+..      ..++.+.+.. .|+++-++.....   
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~-~~~~~------~~~l~~~l~~-sDii~~~~plt~~T~~  112 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE-KKGYY------VDSLDDLYKQ-ADVISLHVPDVPANVH  112 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-HTTCB------CSCHHHHHHH-CSEEEECSCCCGGGTT
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc-cceee------eccccccccc-cccccccCCccccccc
Confidence            478999999 9999999999999999999998655443221 22221      1233333433 8999988764311   


Q ss_pred             --HHHHHhhccCCCEEEEEcc
Q 017901          251 --ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~  269 (364)
                        -...++.|+++..+|.++-
T Consensus       113 li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         113 MINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CBSHHHHHHSCTTEEEEECSC
T ss_pred             cccHHHHhhhCCccEEEecCc
Confidence              2577899999999998874

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.44  E-value=0.064  Score=41.61  Aligned_cols=103  Identities=16%  Similarity=0.151  Sum_probs=62.7

Q ss_pred             HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-H----HHHHcCC-----ceeeeCCC-hhHH
Q 017901          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-D----RVLAAGA-----EQAVDYSS-KDIE  231 (364)
Q Consensus       164 ~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~----~~~~~g~-----~~v~~~~~-~~~~  231 (364)
                      +++.+...--.+++|+|.| +|+.+.+++..+...|++ ++.+.|+.+. +    ++.+++.     ..+.+..+ .++.
T Consensus         7 ~~l~~~~~~l~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   85 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA   85 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHHcCCCcCCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchh
Confidence            3444433224678999999 789999999988889984 5555665432 2    2333321     12333433 3445


Q ss_pred             HHhcCCccEEEECCCCc------hhHHHHHhhccCCCEEEEEc
Q 017901          232 LAIKGKFDAVLDTIGAP------ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       232 ~~i~g~~D~vid~~g~~------~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +.+.. +|++|+|+.-.      +.+..-...++++..++.+-
T Consensus        86 ~~~~~-~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          86 EALAS-ADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             HHHHT-CSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             hhhcc-cceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence            55545 99999998632      11122245678888888775

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.40  E-value=0.023  Score=47.59  Aligned_cols=101  Identities=18%  Similarity=0.079  Sum_probs=66.5

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc---eeeeCCChhHHHHhcCC
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QAVDYSSKDIELAIKGK  237 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~---~v~~~~~~~~~~~i~g~  237 (364)
                      |.....+++|.+||=.| +| .|..+..+++..|++|+++.-++.. +.    +...|..   .+...+-.++.-. .+.
T Consensus        59 l~~~~~l~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~-~~s  135 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLG-AG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCE-DNS  135 (282)
T ss_dssp             HHHTTCCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSC-TTC
T ss_pred             HHHhcCCCCCCEEEEeC-CC-CcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccccc-ccc
Confidence            44567889999999998 34 6778888898889999999766553 33    3444443   1222222222100 134


Q ss_pred             ccEEEECC-----CCc-hhHHHHHhhccCCCEEEEEcc
Q 017901          238 FDAVLDTI-----GAP-ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~vid~~-----g~~-~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +|+|+-.-     ... ..+..+.+.|+|||+++....
T Consensus       136 fD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         136 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            99997632     222 367899999999999987754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.012  Score=47.78  Aligned_cols=73  Identities=19%  Similarity=0.341  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH---HHHHHcCCceeeeCCC-hhHHHHhcCCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI---DRVLAAGAEQAVDYSS-KDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~---~~~~~~g~~~v~~~~~-~~~~~~i~g~~D~vid~~g~  247 (364)
                      .+++|||+||+|.+|...++.+...|.  +|+++.|++..   ........ ...|.++ +++.+.+.+ +|++|.|+|.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~-~~~D~~~~~~~~~~~~~-~d~vi~~~~~   90 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQ-EVVDFEKLDDYASAFQG-HDVGFCCLGT   90 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEE-EECCGGGGGGGGGGGSS-CSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeee-eeecccccccccccccc-cccccccccc
Confidence            346899999999999999999988885  89999886532   11111111 1223332 345555557 9999999986


Q ss_pred             c
Q 017901          248 P  248 (364)
Q Consensus       248 ~  248 (364)
                      .
T Consensus        91 ~   91 (232)
T d2bkaa1          91 T   91 (232)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=95.29  E-value=0.018  Score=46.86  Aligned_cols=100  Identities=18%  Similarity=0.246  Sum_probs=65.6

Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce--eeeCCChhHHHHhcCC
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ--AVDYSSKDIELAIKGK  237 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~--v~~~~~~~~~~~i~g~  237 (364)
                      .+.+.+.+++|++||=.|+  +.|..+..+++. +++|+++.-++.. +    .+...+.+.  .+..+..++.- -.+.
T Consensus         7 ~l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~-~~~~   82 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF-PDDS   82 (234)
T ss_dssp             HHHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS-CTTC
T ss_pred             HHHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccc-cccc
Confidence            3557889999999999983  367888888874 7899999777653 3    334444432  22212111110 0145


Q ss_pred             ccEEEECCCC------chhHHHHHhhccCCCEEEEEc
Q 017901          238 FDAVLDTIGA------PETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       238 ~D~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+|+.+-.-      ...+..+.+.|+|||+++..-
T Consensus        83 fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          83 FDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            9998874332      236889999999999988764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.21  E-value=0.022  Score=49.51  Aligned_cols=73  Identities=18%  Similarity=0.151  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee--eeCCCh-hHHHHhcCCccEEEECCCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA--VDYSSK-DIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v--~~~~~~-~~~~~i~g~~D~vid~~g~  247 (364)
                      .+.+|||+||+|-+|..++..+...|.+|+++.+...............  .|..+. .+.....+ +|.|+.+.+.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~Vih~a~~   89 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEG-VDHVFNLAAD   89 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTT-CSEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhc-CCeEeecccc
Confidence            4778999999999999999999999999999865443211112222222  233332 33344446 9999998754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.16  E-value=0.019  Score=46.43  Aligned_cols=98  Identities=20%  Similarity=0.252  Sum_probs=64.8

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCce--eeeCCChhHHHHhcCCcc
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQ--AVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~--v~~~~~~~~~~~i~g~~D  239 (364)
                      .+.++++++++||=.| +| .|..+..+++. |++|+++.-++.. +.    +.+.+.+.  +...+..++.-. .+.+|
T Consensus         8 l~~~~l~~~~rVLDiG-cG-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~~-~~~fD   83 (231)
T d1vl5a_           8 MQIAALKGNEEVLDVA-TG-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT-DERFH   83 (231)
T ss_dssp             HHHHTCCSCCEEEEET-CT-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC-TTCEE
T ss_pred             HHhcCCCCcCEEEEec-cc-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccccccccc-ccccc
Confidence            4678999999999999 44 67777777754 7899999776653 33    34455543  222222222100 13499


Q ss_pred             EEEECCC-----Cc-hhHHHHHhhccCCCEEEEEc
Q 017901          240 AVLDTIG-----AP-ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       240 ~vid~~g-----~~-~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+-.-.     .+ ..+..+.++|+|||+++...
T Consensus        84 ~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          84 IVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            9986533     22 46789999999999998764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.09  E-value=0.03  Score=44.34  Aligned_cols=47  Identities=23%  Similarity=0.323  Sum_probs=38.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE  220 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~  220 (364)
                      -.|.+|+|.| .|.+|..+++.+...|++|++...+... .....+|++
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~   72 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT   72 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccc
Confidence            3689999999 9999999999999999999987665443 556666664

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.06  E-value=0.018  Score=49.71  Aligned_cols=75  Identities=17%  Similarity=0.184  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC----Ccee-eeCCChh-HHHHhc-CCccEEEEC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG----AEQA-VDYSSKD-IELAIK-GKFDAVLDT  244 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g----~~~v-~~~~~~~-~~~~i~-g~~D~vid~  244 (364)
                      .+++|||+||+|-+|..+++.+...|.+|+++.+....  .++....    ...+ .|.++.+ +.+... .++|+++.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            47899999999999999999999999999999876542  3333222    2211 2333333 223332 127999998


Q ss_pred             CCCc
Q 017901          245 IGAP  248 (364)
Q Consensus       245 ~g~~  248 (364)
                      ++..
T Consensus        87 aa~~   90 (356)
T d1rkxa_          87 AAQP   90 (356)
T ss_dssp             CSCC
T ss_pred             hccc
Confidence            8753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.03  E-value=0.028  Score=46.52  Aligned_cols=75  Identities=20%  Similarity=0.281  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH--H-HHHHcCCce---eeeCCCh----hHHHHhc-----
Q 017901          173 SEGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI--D-RVLAAGAEQ---AVDYSSK----DIELAIK-----  235 (364)
Q Consensus       173 ~~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~--~-~~~~~g~~~---v~~~~~~----~~~~~i~-----  235 (364)
                      -.|+++||+||+  .++|.+.++.+...|++|+.+.+++.+  + ...+++...   ..|..+.    ++.+.+.     
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            468999999964  469999999899999999998776553  2 334455432   2233332    2222222     


Q ss_pred             -CCccEEEECCCC
Q 017901          236 -GKFDAVLDTIGA  247 (364)
Q Consensus       236 -g~~D~vid~~g~  247 (364)
                       +++|+++.+.|.
T Consensus        84 ~~~ld~~i~~ag~   96 (268)
T d2h7ma1          84 GNKLDGVVHSIGF   96 (268)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCcceeeecccc
Confidence             458999999884

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.97  E-value=0.018  Score=47.74  Aligned_cols=34  Identities=15%  Similarity=0.220  Sum_probs=30.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.||+||++++|.+.++.+...|++|+.+.++.+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~   36 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE   36 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence            5799999999999999999999999999987644

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.95  E-value=0.019  Score=49.50  Aligned_cols=78  Identities=27%  Similarity=0.268  Sum_probs=52.6

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH----cCCc---eee--eCCC-hhHHHHhcCC
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA----AGAE---QAV--DYSS-KDIELAIKGK  237 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~----~g~~---~v~--~~~~-~~~~~~i~g~  237 (364)
                      ..-+++|++|||+||+|-+|..+++.+...|.+|++++++... ..+.+    ....   ..+  |..+ ..+...+.+ 
T Consensus         5 ~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   83 (342)
T d1y1pa1           5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG-   83 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT-
T ss_pred             CCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhccc-
Confidence            3456889999999999999999999888889999999887543 22211    1111   111  2222 233344446 


Q ss_pred             ccEEEECCCC
Q 017901          238 FDAVLDTIGA  247 (364)
Q Consensus       238 ~D~vid~~g~  247 (364)
                      +|.++.+.+.
T Consensus        84 ~~~v~~~a~~   93 (342)
T d1y1pa1          84 AAGVAHIASV   93 (342)
T ss_dssp             CSEEEECCCC
T ss_pred             chhhhhhccc
Confidence            9999987775

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.94  E-value=0.077  Score=41.13  Aligned_cols=84  Identities=18%  Similarity=0.264  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc-hh--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP-ET--  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~-~~--  250 (364)
                      .|+++.|.| .|.+|...+++++.+|++|++..+....      +.....    .++.+.+.. .|+|+-++.-. .+  
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~------~~~~~~----~~l~ell~~-sDiv~~~~pl~~~t~~  108 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKE------GPWRFT----NSLEEALRE-ARAAVCALPLNKHTRG  108 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCC------SSSCCB----SCSHHHHTT-CSEEEECCCCSTTTTT
T ss_pred             cCceEEEec-cccccccceeeeeccccccccccccccc------cceeee----echhhhhhc-cchhhccccccccccc
Confidence            478999999 8999999999999999999999765432      111111    134444444 89999877642 12  


Q ss_pred             --HHHHHhhccCCCEEEEEcc
Q 017901          251 --ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~  269 (364)
                        -...++.|+++..+|.++-
T Consensus       109 li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         109 LVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CBCHHHHTTSCTTCEEEECSC
T ss_pred             ccccceeeeccccceEEeccc
Confidence              2578899999999999974

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.028  Score=39.87  Aligned_cols=71  Identities=14%  Similarity=0.187  Sum_probs=45.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCChhHHHHhc---CCccEE---EECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSKDIELAIK---GKFDAV---LDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~i~---g~~D~v---id~~g~  247 (364)
                      +.+|.|.| +|.+|.+.++.|+.+|.++++...+++. -+....... +.++++.+......   + +|+|   |+.+..
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~-PA~~va~~~i~~~~~d~~~l~~~~~~~~-~DviT~E~EnI~~   87 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADA-PAMHVAHRSHVINMLDGDALRRVVELEK-PHYIVPEIEAIAT   87 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTC-GGGGGSSEEEECCTTCHHHHHHHHHHHC-CSEEEECSSCSCH
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCC-chhhcCCeEEECCCCCHHHHHHHHHhhC-CceEEEEecCcCH
Confidence            35699999 8999999999999999999998765542 111122222 33455554333222   3 7887   444444


Q ss_pred             c
Q 017901          248 P  248 (364)
Q Consensus       248 ~  248 (364)
                      +
T Consensus        88 ~   88 (111)
T d1kjqa2          88 D   88 (111)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.88  E-value=0.044  Score=44.72  Aligned_cols=34  Identities=26%  Similarity=0.326  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~  207 (364)
                      -.|.+|+|.| .|.+|..+++++...|++|+++..
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            4789999999 999999999999999999998864

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.86  E-value=0.51  Score=35.25  Aligned_cols=87  Identities=15%  Similarity=0.190  Sum_probs=62.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHH--
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL--  253 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~--  253 (364)
                      +|-+.| .|.+|...++-+...|.+|++..++++. +.+.+.++.. .+ +   ..+.+.. .|++|-|+..+.....  
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~-~~-~---~~e~~~~-~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-AS-T---AKAIAEQ-CDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CS-S---HHHHHHH-CSEEEECCSSHHHHHHHH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh-cc-c---HHHHHhC-CCeEEEEcCCHHHHHHHH
Confidence            578889 8999999999888899999998777665 6677777642 21 1   2223334 8999999987655544  


Q ss_pred             -----HHhhccCCCEEEEEccC
Q 017901          254 -----GLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       254 -----~~~~l~~~G~~v~~g~~  270 (364)
                           ....++++..++.++..
T Consensus        75 ~~~~~~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          75 LGENGIIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HSTTCHHHHCCTTCEEEECSCC
T ss_pred             hCCcchhhccCCCCEEEECCCC
Confidence                 34566788888877654

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.76  E-value=0.03  Score=45.31  Aligned_cols=98  Identities=19%  Similarity=0.194  Sum_probs=64.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHH----cCCceeeeCCC--h-hHHHHhcCC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLA----AGAEQAVDYSS--K-DIELAIKGK  237 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~----~g~~~v~~~~~--~-~~~~~i~g~  237 (364)
                      +...++||++||=.|+  +.|..+..+|+..|.  +|+++..+++. +.+++    .+....+..+.  . .+.... ..
T Consensus        67 ~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~-~~  143 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALV-PK  143 (227)
T ss_dssp             CCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTC-CC
T ss_pred             cccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccc-cc
Confidence            4567999999999994  358899999998864  89999877664 33322    22222222221  1 111111 34


Q ss_pred             ccEEEECCCCc----hhHHHHHhhccCCCEEEEEc
Q 017901          238 FDAVLDTIGAP----ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       238 ~D~vid~~g~~----~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|+++..+..+    ..+.++.+.|++||+++.+-
T Consensus       144 vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence            89888765533    24778889999999998763

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.015  Score=47.27  Aligned_cols=95  Identities=21%  Similarity=0.228  Sum_probs=59.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-----eeeCCChhHHHHhc-CCccEE-EE
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-----AVDYSSKDIELAIK-GKFDAV-LD  243 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-----v~~~~~~~~~~~i~-g~~D~v-id  243 (364)
                      ..+|.+||-.|  ++.|..+..+++..+.+|+++..++.. +.+++.....     .+............ +++|.+ ||
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD  128 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYD  128 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeec
Confidence            36788999998  346888888988777789998666554 5554433221     11111112222222 458887 57


Q ss_pred             CCCCc----------hhHHHHHhhccCCCEEEEEc
Q 017901          244 TIGAP----------ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       244 ~~g~~----------~~~~~~~~~l~~~G~~v~~g  268 (364)
                      .+...          ..+..+.+.|+|||+++.+.
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         129 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            65432          13567889999999998753

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=94.73  E-value=0.042  Score=42.27  Aligned_cols=98  Identities=18%  Similarity=0.221  Sum_probs=57.6

Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC---ceeeeCCChhHHHHhcCCcc
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA---EQAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~---~~v~~~~~~~~~~~i~g~~D  239 (364)
                      +|.+.....++++|+|.| +|+.+.+++..+...+.+++.+.|+.++  .++..+..   ...+.....    .. ..+|
T Consensus         8 ~l~~~~~~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~----~~-~~~d   81 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI----PL-QTYD   81 (171)
T ss_dssp             HHHHTTCCCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC----CC-SCCS
T ss_pred             HHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc----cc-cccc
Confidence            344433345788999999 7889999988888777788888887664  33444431   112211110    11 2399


Q ss_pred             EEEECCCCch---hHHHHHhhccCCCEEEEEc
Q 017901          240 AVLDTIGAPE---TERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       240 ~vid~~g~~~---~~~~~~~~l~~~G~~v~~g  268 (364)
                      ++|+|++...   ........++++..++.+-
T Consensus        82 iiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~v  113 (171)
T d1p77a1          82 LVINATSAGLSGGTASVDAEILKLGSAFYDMQ  113 (171)
T ss_dssp             EEEECCCC-------CCCHHHHHHCSCEEESC
T ss_pred             eeeecccccccccccchhhhhhcccceeeeee
Confidence            9999988641   1112233455566665554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.73  E-value=0.12  Score=39.28  Aligned_cols=89  Identities=11%  Similarity=0.022  Sum_probs=62.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHHcCCc-eeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      +|+|.| .|.+|...+..++..|.  +|++..++++. +.+++.+.. ..... ....  .... .|+|+-|+....   
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~-~~~~--~~~~-~dlIila~p~~~~~~   77 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS-IAKV--EDFS-PDFVMLSSPVRTFRE   77 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC-GGGG--GGTC-CSEEEECSCHHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhh-hhhh--hccc-cccccccCCchhhhh
Confidence            689999 89999999999988885  78888777654 778888753 23221 1111  1113 899999999652   


Q ss_pred             hHHHHHhhccCCCEEEEEccC
Q 017901          250 TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+....+.+.++..++.++..
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            345566778888888888754

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.014  Score=49.77  Aligned_cols=72  Identities=17%  Similarity=0.210  Sum_probs=43.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC--CccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCG--SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~--~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~  247 (364)
                      ++|||+||+|-+|..++..+...|.+|+++.+  +...+.+...-....++..+.+..+.+..++|+||.+.+.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECccc
Confidence            57999999999999999999889999999864  2222222111111111211112222222239999998763

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.62  E-value=0.028  Score=42.70  Aligned_cols=91  Identities=16%  Similarity=0.062  Sum_probs=57.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce--eeeCCChhHHHHhcCCccEEEECCCCch---h
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ--AVDYSSKDIELAIKGKFDAVLDTIGAPE---T  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~--v~~~~~~~~~~~i~g~~D~vid~~g~~~---~  250 (364)
                      +|+|.| +|.+|.+....+...|.+|..+.+.++. ......+.+.  .......+..+.+.. +|++|-|+....   .
T Consensus         2 kI~IiG-aG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~iii~vka~~~~~~   79 (167)
T d1ks9a2           2 KITVLG-CGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLAT-SDLLLVTLKAWQVSDA   79 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHT-CSEEEECSCGGGHHHH
T ss_pred             EEEEEC-cCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcc-cceEEEeecccchHHH
Confidence            689999 6999999999888899999999887764 2222222211  000001122233334 999999999862   2


Q ss_pred             HHHHHhhccCCCEEEEEcc
Q 017901          251 ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~  269 (364)
                      +..+...+.++..++.+..
T Consensus        80 ~~~l~~~~~~~~~Iv~~qN   98 (167)
T d1ks9a2          80 VKSLASTLPVTTPILLIHN   98 (167)
T ss_dssp             HHHHHTTSCTTSCEEEECS
T ss_pred             HHhhccccCcccEEeeccC
Confidence            3344455666777777653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.58  E-value=0.092  Score=35.94  Aligned_cols=71  Identities=20%  Similarity=0.324  Sum_probs=50.5

Q ss_pred             cCCCCEEEEEcCCchHHHHH-HHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          172 MSEGQRLLVLGGGGAVGFAA-VQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~-~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      ....+++.+.| -|++|..+ +++++..|.+|.+......  .+.+.+.|......+....    +.+ +|+|+=..+-+
T Consensus         5 ~~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~----i~~-~d~vV~S~AI~   78 (96)
T d1p3da1           5 MRRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEH----IEG-ASVVVVSSAIK   78 (96)
T ss_dssp             CTTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGG----GTT-CSEEEECTTSC
T ss_pred             chhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcccc----CCC-CCEEEECCCcC
Confidence            35567899999 78888766 8999999999999976544  3667888986433333222    234 89988777654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=94.53  E-value=0.044  Score=46.02  Aligned_cols=37  Identities=19%  Similarity=0.303  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      .|+++||+||+|  ++|.+.++.+...|++|+...+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence            688999999876  8999999999999999998876543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.51  E-value=0.021  Score=43.86  Aligned_cols=94  Identities=14%  Similarity=0.186  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce---------eeeCCChhHHHHhcCCccEEEE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ---------AVDYSSKDIELAIKGKFDAVLD  243 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~---------v~~~~~~~~~~~i~g~~D~vid  243 (364)
                      -.|++++|.|.+..+|.=++.++...|++|+.+........-  .+++.         +-.+..+.+.+.... +|+++.
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~lk~~~~~-aDIvIs  103 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT--RGESLKLNKHHVEDLGEYSEDLLKKCSLD-SDVVIT  103 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE--SCCCSSCCCCEEEEEEECCHHHHHHHHHH-CSEEEE
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccc--cccceeeeeeccccccccchhHHhhcccc-CCEEEE
Confidence            468999999988899999999999999999866433211100  01111         111222233444434 899999


Q ss_pred             CCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          244 TIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++|.+ .+..--+++++|..++.+|..
T Consensus       104 avG~p-~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1         104 GVPSE-NYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             CCCCT-TCCBCTTTSCTTEEEEECSSS
T ss_pred             ccCCC-ccccChhhcccCceEeecccc
Confidence            99998 443455789999999999865

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.46  E-value=0.61  Score=35.55  Aligned_cols=137  Identities=15%  Similarity=0.084  Sum_probs=79.4

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHcC--CeEEEeeCCcc-H--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCch
Q 017901          177 RLLVLGGGGAVGFA-AVQFSVASG--CHVSATCGSKS-I--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPE  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~-~~~~a~~~g--~~vi~~~~~~~-~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~  249 (364)
                      ++.|.| +|.+|.- .....+..+  .+++++++... +  ....+.+...+++    ++.+.+. ..+|+|+-|+....
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~----~~~ell~~~~id~v~I~tp~~~   79 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD----SYEELLESGLVDAVDLTLPVEL   79 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES----CHHHHHHSSCCSEEEECCCGGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee----eeeccccccccceeeccccccc
Confidence            578999 8999864 466666543  47888865543 2  4456677654442    2334443 23999999999876


Q ss_pred             hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEe-ccC--HHHHHHHHHHHH
Q 017901          250 TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYM-RAD--AEGLEEIRRLSE  326 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~  326 (364)
                      ....+..++..| .=|.+..+..          . ...   ....-......++..+.-.+. +.+  ...+..+.+++.
T Consensus        80 h~~~~~~al~~g-k~V~~EKPl~----------~-~~~---e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~  144 (181)
T d1zh8a1          80 NLPFIEKALRKG-VHVICEKPIS----------T-DVE---TGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVA  144 (181)
T ss_dssp             HHHHHHHHHHTT-CEEEEESSSS----------S-SHH---HHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHH
T ss_pred             cccccccccccc-hhhhcCCCCc----------C-CHH---HHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHH
Confidence            677777777765 5566665411          0 111   111111122233444433332 222  356788899999


Q ss_pred             cCCceec
Q 017901          327 TGKLKIP  333 (364)
Q Consensus       327 ~g~i~~~  333 (364)
                      +|++...
T Consensus       145 ~G~ig~i  151 (181)
T d1zh8a1         145 EGKPNDL  151 (181)
T ss_dssp             SCCCCSS
T ss_pred             CCCCccC
Confidence            9987543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.44  E-value=0.049  Score=45.36  Aligned_cols=33  Identities=21%  Similarity=0.151  Sum_probs=28.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~  209 (364)
                      .+||+||++++|.+.++.+...|++|+...++.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~   36 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   36 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence            468999999999999999999999999876543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.43  E-value=0.67  Score=34.63  Aligned_cols=88  Identities=20%  Similarity=0.218  Sum_probs=62.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHH
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG  254 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~  254 (364)
                      ++|.+.| .|.+|...+.-+...|.+|++..++.++ +.+.+.+.....     +..+.+.. .|+++-|+.........
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~-----~~~e~~~~-~diii~~v~~~~~~~~v   74 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAAR-----SARDAVQG-ADVVISMLPASQHVEGL   74 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECS-----SHHHHHTS-CSEEEECCSCHHHHHHH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccc-----hhhhhccc-cCeeeecccchhhHHHH
Confidence            3688889 9999998888888889999998877665 666777754221     23344444 89999999987554433


Q ss_pred             -------HhhccCCCEEEEEccC
Q 017901          255 -------LNFLKRGGHYMTLHGE  270 (364)
Q Consensus       255 -------~~~l~~~G~~v~~g~~  270 (364)
                             ...+.++-.++.++..
T Consensus        75 ~~~~~~~~~~l~~g~iiid~st~   97 (162)
T d3cuma2          75 YLDDDGLLAHIAPGTLVLECSTI   97 (162)
T ss_dssp             HHSTTCHHHHSCTTCEEEECSCC
T ss_pred             HhccccccccCCCCCEEEECCCC
Confidence                   4456777788777654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.40  E-value=0.084  Score=43.13  Aligned_cols=35  Identities=14%  Similarity=0.189  Sum_probs=30.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.|||+||++++|.+.++.+...|++|+.+.+++.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            35799999999999999999999999999876543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.40  E-value=0.12  Score=38.61  Aligned_cols=84  Identities=13%  Similarity=0.031  Sum_probs=62.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG  254 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~  254 (364)
                      ++.+.| +|.+|.+.+.-....|.++++..++.++  ++.+++|+..+.     +..+.+.. .|+||-|+-.. .+...
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~-----~~~~~~~~-~dvIilavkp~-~~~~v   73 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM-----SHQDLIDQ-VDLVILGIKPQ-LFETV   73 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS-----SHHHHHHT-CSEEEECSCGG-GHHHH
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec-----hhhhhhhc-cceeeeecchH-hHHHH
Confidence            577889 8999998888777778899988777654  445677765332     22333335 99999999755 88888


Q ss_pred             HhhccCCCEEEEEc
Q 017901          255 LNFLKRGGHYMTLH  268 (364)
Q Consensus       255 ~~~l~~~G~~v~~g  268 (364)
                      ++.++++..++.+.
T Consensus        74 l~~l~~~~~iis~~   87 (152)
T d2ahra2          74 LKPLHFKQPIISMA   87 (152)
T ss_dssp             HTTSCCCSCEEECC
T ss_pred             hhhcccceeEeccc
Confidence            99999988888764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.28  Score=36.42  Aligned_cols=91  Identities=18%  Similarity=0.205  Sum_probs=65.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH----HHHHHcCCceeeeCCChh---------------------
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI----DRVLAAGAEQAVDYSSKD---------------------  229 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~----~~~~~~g~~~v~~~~~~~---------------------  229 (364)
                      ++.|.|++|.+|.-+..+.+...  ++|++++-....    +.+.++....++-.+...                     
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~   82 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQ   82 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESH
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccCh
Confidence            68999999999999999999874  588888544332    556788877665443321                     


Q ss_pred             --HHHHhc-CCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901          230 --IELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       230 --~~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~  267 (364)
                        +.+... .++|+|+.+..+...+.-.+.+++.|=++.+.
T Consensus        83 ~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          83 QAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             HHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             HHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence              111111 24899999988887899999999988776555

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.63  Score=34.78  Aligned_cols=135  Identities=10%  Similarity=-0.005  Sum_probs=77.6

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCeEEEeeCCc-cH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901          177 RLLVLGGGGAVGFA-AVQFSVAS-GCHVSATCGSK-SI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (364)
Q Consensus       177 ~vli~g~~g~~G~~-~~~~a~~~-g~~vi~~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~  251 (364)
                      ++.|.| +|.+|.- .....+.. +.+++++++.. +.  ....+.++. .++  .  +.+.+.. +|+|+.|+......
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-~~~--~--~~~l~~~-~D~V~I~tp~~~h~   75 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-YAD--S--LSSLAAS-CDAVFVHSSTASHF   75 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-BCS--S--HHHHHTT-CSEEEECSCTTHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-ccc--c--chhhhhh-cccccccccchhcc
Confidence            578999 7888864 55555554 67888886543 32  556777765 222  1  2222334 99999999987667


Q ss_pred             HHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-CHHHHHHHHHHHHcCCc
Q 017901          252 RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-DAEGLEEIRRLSETGKL  330 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~i  330 (364)
                      ..+..+++.| .=|.+..+..          .+..    ....-.......+..+.-.+... .....+.+.+++.+|.+
T Consensus        76 ~~~~~al~~g-k~V~~EKPla----------~~~~----e~~~l~~~a~~~~~~~~v~~~~r~~~~~~~~~~~~i~~g~i  140 (164)
T d1tlta1          76 DVVSTLLNAG-VHVCVDKPLA----------ENLR----DAERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQTV  140 (164)
T ss_dssp             HHHHHHHHTT-CEEEEESSSC----------SSHH----HHHHHHHHHHHTTCCEEEECGGGGHHHHHHHHHHHHHHTCC
T ss_pred             cccccccccc-ceeecccccc----------CCHH----HHHHHHHHHHHcCCcEEEEeccccCHHHHHHHHHHHHCCCC
Confidence            7777777776 4456655411          0011    11111112233455444433332 23445678889999887


Q ss_pred             eec
Q 017901          331 KIP  333 (364)
Q Consensus       331 ~~~  333 (364)
                      ...
T Consensus       141 g~~  143 (164)
T d1tlta1         141 PQT  143 (164)
T ss_dssp             CTT
T ss_pred             CCE
Confidence            653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.12  E-value=0.06  Score=44.43  Aligned_cols=33  Identities=18%  Similarity=0.236  Sum_probs=30.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~  209 (364)
                      +|||+||+|.+|..++..++..|.+|+++.+.+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            699999999999999999999999999997653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.03  E-value=0.1  Score=43.59  Aligned_cols=72  Identities=21%  Similarity=0.307  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---------HHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---------DRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLD  243 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---------~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid  243 (364)
                      -.+|||+||+|.+|..++..+...|.+|++++|+...         ..+...+++.+ .|..+. .+...+.+ .+.++.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~-~~~~~~   81 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQ-VDVVIS   81 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTT-CSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccC-cchhhh
Confidence            4569999999999999999999999999999876431         12234455432 233333 34444456 889998


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.+.
T Consensus        82 ~~~~   85 (312)
T d1qyda_          82 ALAG   85 (312)
T ss_dssp             CCCC
T ss_pred             hhhh
Confidence            8764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.92  E-value=0.16  Score=39.12  Aligned_cols=79  Identities=16%  Similarity=0.170  Sum_probs=52.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce---ee----e----CCChhHHHHhcCCccEEEECC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ---AV----D----YSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~---v~----~----~~~~~~~~~i~g~~D~vid~~  245 (364)
                      +|.|.| +|.+|.+.+..+...|.+|....+..+.+.++.+...+   .+    .    ....++.+.+.+ .|+|+.++
T Consensus         2 kI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-ad~Ii~av   79 (180)
T d1txga2           2 IVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN-AEVVLLGV   79 (180)
T ss_dssp             EEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT-CSEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhc-cchhhccc
Confidence            588999 89999999999988899999888765543333322211   00    0    112355556666 99999999


Q ss_pred             CCchhHHHHHhhc
Q 017901          246 GAPETERLGLNFL  258 (364)
Q Consensus       246 g~~~~~~~~~~~l  258 (364)
                      ... .+...++.+
T Consensus        80 ps~-~~~~~~~~l   91 (180)
T d1txga2          80 STD-GVLPVMSRI   91 (180)
T ss_dssp             CGG-GHHHHHHHH
T ss_pred             chh-hhHHHHHhh
Confidence            987 555444433

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.88  E-value=0.47  Score=34.48  Aligned_cols=71  Identities=27%  Similarity=0.393  Sum_probs=43.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHH-HHhc-----CCccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIE-LAIK-----GKFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~-~~i~-----g~~D~vid~~g~~  248 (364)
                      +|.|.|+.|.+|...++.... .+.++.+.....+ .......++|.++|.+.++.. +.+.     | .-+|+=++|-.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~-~~~ViGTTG~~   79 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNG-IHAVVGTTGFT   79 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTT-CEEEECCCCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcC-CCEEEeccccc
Confidence            588999999999998887755 4678877754333 344444455656665554221 1111     3 55666666643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.88  E-value=0.045  Score=45.11  Aligned_cols=38  Identities=16%  Similarity=0.139  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHH-H--HcCCeEEEeeCCccH
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFS-V--ASGCHVSATCGSKSI  211 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a-~--~~g~~vi~~~~~~~~  211 (364)
                      .|+.++|+||++++|.++++.+ +  ..|++|+.+.++++.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~   45 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM   45 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHH
Confidence            4778899999999999887655 4  268999999887654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.83  E-value=0.11  Score=37.57  Aligned_cols=31  Identities=13%  Similarity=0.205  Sum_probs=27.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~  207 (364)
                      +|.|+|++|.+|....+++...+.++++...
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id   32 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD   32 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC
Confidence            5899999999999999999999988877643

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=93.82  E-value=0.11  Score=44.65  Aligned_cols=71  Identities=17%  Similarity=0.159  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHH---HHHHc-CCceee--eCCC-hhHHH-HhcCCccEEEECC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID---RVLAA-GAEQAV--DYSS-KDIEL-AIKGKFDAVLDTI  245 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~---~~~~~-g~~~v~--~~~~-~~~~~-~i~g~~D~vid~~  245 (364)
                      ..++|+|+||+|.+|..++..+...|.+|++++|+....   .+... |++ ++  |..+ .+..+ ...+ +|.++...
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~-~~~gD~~d~~~~~~~a~~~-~~~~~~~~   79 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT-LFQGPLLNNVPLMDTLFEG-AHLAFINT   79 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEE-EEESCCTTCHHHHHHHHTT-CSEEEECC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCE-EEEeeCCCcHHHHHHHhcC-CceEEeec
Confidence            457899999999999999999999999999999865532   22222 333 33  2222 33333 3336 88887765


Q ss_pred             C
Q 017901          246 G  246 (364)
Q Consensus       246 g  246 (364)
                      .
T Consensus        80 ~   80 (350)
T d1xgka_          80 T   80 (350)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.80  E-value=0.24  Score=39.85  Aligned_cols=34  Identities=26%  Similarity=0.248  Sum_probs=29.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHcCCeEEEeeC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFS-VASGCHVSATCG  207 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a-~~~g~~vi~~~~  207 (364)
                      -.|.+|+|.| .|.+|..+++.+ +..|++|+++..
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            4689999999 999999999877 678999998853

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.79  E-value=0.13  Score=38.13  Aligned_cols=89  Identities=17%  Similarity=0.114  Sum_probs=49.8

Q ss_pred             EEEEEcCCchHHHHHHHHH-HHcC---CeEEEeeCCccH-HHHHHcC-CceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901          177 RLLVLGGGGAVGFAAVQFS-VASG---CHVSATCGSKSI-DRVLAAG-AEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a-~~~g---~~vi~~~~~~~~-~~~~~~g-~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      +|.|.||+|.+|+-.++++ .+..   .++.+..++... ......+ ...+.+..+..   ...+ +|++|-|++.. .
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~---~~~~-~DivF~a~~~~-~   77 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE---ALKA-LDIIVTCQGGD-Y   77 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH---HHHT-CSEEEECSCHH-H
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchh---hhhc-CcEEEEecCch-H
Confidence            6899999999999999754 4332   366666554332 1111111 11122222211   2235 99999999998 4


Q ss_pred             HHHHHhhc-cCC--CEEEEEccC
Q 017901          251 ERLGLNFL-KRG--GHYMTLHGE  270 (364)
Q Consensus       251 ~~~~~~~l-~~~--G~~v~~g~~  270 (364)
                      .......+ ..|  ..++..+..
T Consensus        78 s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          78 TNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             HHHHHHHHHHTTCCCEEEECSST
T ss_pred             HHHhhHHHHhcCCCeecccCCcc
Confidence            44444444 444  347777654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.78  E-value=0.23  Score=37.32  Aligned_cols=91  Identities=16%  Similarity=0.201  Sum_probs=56.4

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHcC-CeEEEeeCCc-c-H--HHHHHcCCceeeeCCChhHHHHhc--CCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGF-AAVQFSVASG-CHVSATCGSK-S-I--DRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~-~~~~~a~~~g-~~vi~~~~~~-~-~--~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~g~  247 (364)
                      -++.|.| +|.+|. ...++++... .+++++++.. + .  .++++.|..... ..-+++.+...  + +|+||+++..
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~-~~~d~l~~~~~~~~-iDiVf~ATpa   81 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-AGVEGLIKLPEFAD-IDFVFDATSA   81 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-SHHHHHHHSGGGGG-EEEEEECSCH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc-cceeeeeecccccc-cCEEEEcCCc
Confidence            4689999 899986 5678887664 4788886532 2 2  567788865322 11122332221  4 9999999886


Q ss_pred             chhHH--HHHhhccCCCEEEEEcc
Q 017901          248 PETER--LGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       248 ~~~~~--~~~~~l~~~G~~v~~g~  269 (364)
                      .....  .+.+.++.|-.++....
T Consensus        82 g~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          82 SAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEECST
T ss_pred             hhHHHhHHHHHHHHcCCEEEEccc
Confidence            53444  33455666666766653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.77  E-value=0.17  Score=42.48  Aligned_cols=72  Identities=19%  Similarity=0.183  Sum_probs=47.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc---HHHHHHcCCce---e--eeCCChh-HHHHhc-CCccEEEECC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDRVLAAGAEQ---A--VDYSSKD-IELAIK-GKFDAVLDTI  245 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~---~~~~~~~g~~~---v--~~~~~~~-~~~~i~-g~~D~vid~~  245 (364)
                      ++|||+||+|-+|..++..+...|.+|+++.+...   ...+..++.+.   .  .|..+.. +..... ...++++.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            57999999999999999999888999999976432   25555555432   1  2333322 222222 1267777776


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      ..
T Consensus        81 ~~   82 (321)
T d1rpna_          81 AQ   82 (321)
T ss_dssp             SC
T ss_pred             cc
Confidence            54

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.73  E-value=0.11  Score=45.38  Aligned_cols=32  Identities=28%  Similarity=0.501  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEee
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~  206 (364)
                      |.+|||+||+|-+|..++..+...|.+|+++.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            68999999999999999999999999999984

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.65  E-value=0.041  Score=44.58  Aligned_cols=35  Identities=29%  Similarity=0.272  Sum_probs=31.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +++||+||++++|.+.++.+...|++|+.+.++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   36 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   36 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            67899999999999999999999999999987654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.63  E-value=0.052  Score=42.86  Aligned_cols=86  Identities=21%  Similarity=0.221  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~---  250 (364)
                      .|++|.|.| .|.+|..++++++.+|++|++..+.....      ....+..  .++.+.+.. .|++.-++...+.   
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~------~~~~~~~--~~l~~l~~~-~D~v~~~~plt~~T~~  113 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKG------DHPDFDY--VSLEDLFKQ-SDVIDLHVPGIEQNTH  113 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSS------CCTTCEE--CCHHHHHHH-CSEEEECCCCCGGGTT
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchh------hhcchhH--HHHHHHHHh-cccceeeecccccccc
Confidence            468999999 99999999999999999999987643321      0001111  123333333 8998887664322   


Q ss_pred             --HHHHHhhccCCCEEEEEcc
Q 017901          251 --ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~  269 (364)
                        -...++.|+++..+|.++-
T Consensus       114 li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         114 IINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             SBCHHHHHHSCTTEEEEECSC
T ss_pred             cccHHHhhccCCceEEEeccc
Confidence              2577889999999998874

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.18  Score=42.98  Aligned_cols=99  Identities=16%  Similarity=0.208  Sum_probs=64.4

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHH-----------HcCCc----eeee--CCC
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVL-----------AAGAE----QAVD--YSS  227 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~-----------~~g~~----~v~~--~~~  227 (364)
                      .+...++++++|+=.|  ++.|..+.++|+..++ +++++.-++.. +.++           ..|..    ..+.  ..+
T Consensus       144 ~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~  221 (328)
T d1nw3a_         144 IDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  221 (328)
T ss_dssp             HHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred             HHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence            3778899999999988  4579999999999887 79999766543 2221           12221    1222  223


Q ss_pred             hhHHHHhcCCccEEEECCC--Cc---hhHHHHHhhccCCCEEEEEc
Q 017901          228 KDIELAIKGKFDAVLDTIG--AP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       228 ~~~~~~i~g~~D~vid~~g--~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                      ..+.+.+.. +|+|+-..-  .+   ..+....+.|+|||++|+.-
T Consensus       222 ~~~~~~~~~-advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         222 EEWRERIAN-TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             HHHHHHHHH-CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccccccCc-ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            344444433 788875322  12   24567888999999999764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.52  E-value=0.16  Score=39.51  Aligned_cols=89  Identities=11%  Similarity=0.058  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc-hh-
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP-ET-  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~-~~-  250 (364)
                      .|.++.|.| .|.+|...+++++.+|.+|++...... .......+..   ..  .++.+.+.. .|+|..++.-. .+ 
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~---~~--~~l~~ll~~-sD~v~l~~plt~~T~  118 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQAT---FH--DSLDSLLSV-SQFFSLNAPSTPETR  118 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCE---EC--SSHHHHHHH-CSEEEECCCCCTTTT
T ss_pred             cccceEEee-cccchHHHHHHHHhhccccccccccccccchhhccccc---cc--CCHHHHHhh-CCeEEecCCCCchHh
Confidence            379999999 999999999999999999999866443 2222222221   11  123333333 89998876542 11 


Q ss_pred             ---HHHHHhhccCCCEEEEEcc
Q 017901          251 ---ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ---~~~~~~~l~~~G~~v~~g~  269 (364)
                         -...++.|+++..+|.++-
T Consensus       119 ~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         119 YFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             heecHHHhhCcCCccEEEecCC
Confidence               2478889999999998874

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.50  E-value=0.16  Score=43.24  Aligned_cols=36  Identities=6%  Similarity=-0.021  Sum_probs=29.8

Q ss_pred             CCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          175 GQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       175 g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ++.+||+|+  +.++|.+.++.+...|++|+...++..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~   39 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPV   39 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchh
Confidence            567899994  459999999999999999998866544

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.44  E-value=0.92  Score=33.91  Aligned_cols=135  Identities=11%  Similarity=0.049  Sum_probs=76.4

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901          177 RLLVLGGGGAVGFA-AVQFSVAS-GCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (364)
Q Consensus       177 ~vli~g~~g~~G~~-~~~~a~~~-g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~  252 (364)
                      ++.|.| +|.+|.- .....+.. +..++++.++.+.  ....+++...+++.- +++.+  .+ +|+|+-|+.......
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~ll~--~~-iD~V~I~tp~~~H~~   77 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDY-RDVLQ--YG-VDAVMIHAATDVHST   77 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSST-TGGGG--GC-CSEEEECSCGGGHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccH-HHhcc--cc-cceeccccccccccc
Confidence            578899 7888854 45555555 4466544444333  455677765443321 22222  14 999999999886777


Q ss_pred             HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee
Q 017901          253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI  332 (364)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~  332 (364)
                      .+..+++.|= =|.+..+..          . ...   ....-.......+..+.-.+ .+....+.++++.+..|++..
T Consensus        78 ~~~~al~~gk-~V~~EKP~~----------~-~~~---e~~~l~~~a~~~~~~~~vg~-~r~~~~~~~~~~~~~~G~ig~  141 (167)
T d1xeaa1          78 LAAFFLHLGI-PTFVDKPLA----------A-SAQ---ECENLYELAEKHHQPLYVGF-NGFDAMVQDWLQVAAAGKLPT  141 (167)
T ss_dssp             HHHHHHHTTC-CEEEESCSC----------S-SHH---HHHHHHHHHHHTTCCEEEEC-GTHHHHHHHHHHHHHHTCCCH
T ss_pred             cccccccccc-ccccCCCCc----------C-CHH---HHHHHHHHHHHcCCEEEEEe-CcCCHHHHHHHHHhhcCCCCc
Confidence            8888888764 456655411          0 111   11111112233444443323 223456788888888898764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.086  Score=44.08  Aligned_cols=95  Identities=11%  Similarity=0.112  Sum_probs=57.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEe---eCCccH-----HHHHHcCC---c-e--eeeCCChhH-HH---Hhc-C
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSAT---CGSKSI-----DRVLAAGA---E-Q--AVDYSSKDI-EL---AIK-G  236 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~---~~~~~~-----~~~~~~g~---~-~--v~~~~~~~~-~~---~i~-g  236 (364)
                      +.|||+||++++|.+++..+...|++|+.+   .++.+.     +.++++..   . .  ..|..+.+- ..   .+. |
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            346899999999999999999999975544   333221     22344332   1 1  234444322 22   222 5


Q ss_pred             CccEEEECCCCchh-------------------------HHHHHhhc--cCCCEEEEEccC
Q 017901          237 KFDAVLDTIGAPET-------------------------ERLGLNFL--KRGGHYMTLHGE  270 (364)
Q Consensus       237 ~~D~vid~~g~~~~-------------------------~~~~~~~l--~~~G~~v~~g~~  270 (364)
                      ++|+++++.|....                         .+.++..|  +.+|++|.++..
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~  143 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV  143 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence            69999998875311                         24455555  346899988754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.44  E-value=0.19  Score=39.00  Aligned_cols=89  Identities=15%  Similarity=0.058  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---  249 (364)
                      .+.++.|.| .|.+|...++.++.+|.+|+...+.... ......+....     .++.+.+.. .|+|+-+..-.+   
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~-----~~l~~~l~~-sD~v~~~~plt~~T~  115 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----ATREDMYPV-CDVVTLNCPLHPETE  115 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHGGG-CSEEEECSCCCTTTT
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccccccccc-----CCHHHHHHh-ccchhhcccccccch
Confidence            578999999 8999999999999999999999775543 44444443211     123334434 899988766432   


Q ss_pred             --hHHHHHhhccCCCEEEEEcc
Q 017901          250 --TERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       250 --~~~~~~~~l~~~G~~v~~g~  269 (364)
                        .-...+..|+++..+|.++-
T Consensus       116 ~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         116 HMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhHHHHHHhCCCCCEEEecCc
Confidence              12578889999999998874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.43  E-value=0.11  Score=37.24  Aligned_cols=40  Identities=30%  Similarity=0.513  Sum_probs=34.1

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ..++++++++|.| +|.+|.-++..++..|.+|..+.+.++
T Consensus        25 ~~~~~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          25 AGLRPQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             HHCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             HhhhcCCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            3457789999999 899999999999999999999866543

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.42  E-value=0.2  Score=37.45  Aligned_cols=91  Identities=16%  Similarity=0.214  Sum_probs=57.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC---eEEEeeCCccHH-HHHHcCCce-eeeCCChhHHHHhcCCccEEEECCCCch
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKSID-RVLAAGAEQ-AVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~---~vi~~~~~~~~~-~~~~~g~~~-v~~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      |-+|.|.||+|-+|.-.++++..+..   ++..+.+++... ......... ..+..+.++    .. .|++|-+.+...
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~----~~-~d~~f~~~~~~~   75 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAF----EG-VDIALFSAGSST   75 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTT----TT-CSEEEECSCHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhh----hh-hhhhhhccCccc
Confidence            45799999999999999999988853   344444332211 100000000 111111111    13 899999999886


Q ss_pred             hHHHHHhhccCCCEEEEEccC
Q 017901          250 TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.....+.+..+-++|..+..
T Consensus        76 s~~~~~~~~~~~~~VIDlSsd   96 (154)
T d2gz1a1          76 SAKYAPYAVKAGVVVVDNTSY   96 (154)
T ss_dssp             HHHHHHHHHHTTCEEEECSST
T ss_pred             hhhHHhhhccccceehhcChh
Confidence            777777788889999998865

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.41  E-value=0.14  Score=43.48  Aligned_cols=33  Identities=21%  Similarity=0.246  Sum_probs=30.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      +++||+||+|-+|..++..+...|.+|+++.+.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            579999999999999999999999999999863

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=93.38  E-value=0.098  Score=39.89  Aligned_cols=92  Identities=15%  Similarity=0.198  Sum_probs=59.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCce-----eeeCC--------------ChhHHHHh
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQ-----AVDYS--------------SKDIELAI  234 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~-----v~~~~--------------~~~~~~~i  234 (364)
                      +|.|.| -|.+|.++.+++...+.+++++-.....   ..+.+....+     -+...              ...-++.+
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            578999 9999999999988888999998554443   2232222111     00000              00011112


Q ss_pred             c----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          235 K----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       235 ~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .    | +|+|+||+|.-.....+...++.|.+-|.+..+
T Consensus        81 ~W~~~g-vdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          81 PWAEAG-VGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             CTGGGT-EEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             cccccC-CceeEeccccccchHHhhhhhccccceeeeccc
Confidence            1    6 999999999876777888888877766666544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.38  E-value=0.18  Score=40.51  Aligned_cols=47  Identities=28%  Similarity=0.246  Sum_probs=37.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE  220 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~  220 (364)
                      -.|.+|+|.| .|.+|..+++++...|++++++..+...  ......|..
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence            4689999999 9999999999999999999988655443  344455543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.16  E-value=0.23  Score=39.23  Aligned_cols=98  Identities=16%  Similarity=0.116  Sum_probs=62.0

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-H----HHHHcCCceeeeCC--ChhHHHHhcCCccE
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-D----RVLAAGAEQAVDYS--SKDIELAIKGKFDA  240 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~----~~~~~g~~~v~~~~--~~~~~~~i~g~~D~  240 (364)
                      ...++||++||=.|++  .|..+..+++..+ .+|+++.-+++. +    .+++.+-...+..+  ........-..+|+
T Consensus        51 ~l~lkpg~~VLDlGcG--~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~  128 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAA--SGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDL  128 (209)
T ss_dssp             CCCCCSSCEEEEETCT--TSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred             cCCCCCCCEEEEeCCc--CCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEE
Confidence            4678999999999943  4778888888775 489999777653 3    23444322222221  11111111123888


Q ss_pred             EEECCCCc----hhHHHHHhhccCCCEEEEEc
Q 017901          241 VLDTIGAP----ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       241 vid~~g~~----~~~~~~~~~l~~~G~~v~~g  268 (364)
                      ++......    ..+.++.+.|++||+++.+-
T Consensus       129 v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         129 IYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            87755432    24678889999999998764

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.16  E-value=0.18  Score=40.80  Aligned_cols=96  Identities=20%  Similarity=0.207  Sum_probs=61.3

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH----HcCCc-eeeeCCChhHHHHhcCCcc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL----AAGAE-QAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~----~~g~~-~v~~~~~~~~~~~i~g~~D  239 (364)
                      +.......++++||=.| +| .|..+..+++ .|++|+++..+++. +.++    +.+.. .++..+-.++.  ..+++|
T Consensus        33 ~~~~~~~~~~~~iLDiG-cG-tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~--~~~~fD  107 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLA-CG-TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA--FKNEFD  107 (251)
T ss_dssp             HHHHTCSSCCCEEEEET-CT-TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC--CCSCEE
T ss_pred             HHHHhcCCCCCEEEEeC-CC-CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhcc--cccccc
Confidence            33445667788999998 44 3888887777 58999999877764 4333    33332 23333222221  113499


Q ss_pred             EEEECCCCc---------hhHHHHHhhccCCCEEEE
Q 017901          240 AVLDTIGAP---------ETERLGLNFLKRGGHYMT  266 (364)
Q Consensus       240 ~vid~~g~~---------~~~~~~~~~l~~~G~~v~  266 (364)
                      +|+-..+.-         ..+..+.++|+|||.++.
T Consensus       108 ~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         108 AVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             EEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            988754321         257789999999999875

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.09  E-value=0.14  Score=42.35  Aligned_cols=73  Identities=22%  Similarity=0.318  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-------HH---HHHcCCceee-eCCCh-hHHHHhcCCccEEE
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-------DR---VLAAGAEQAV-DYSSK-DIELAIKGKFDAVL  242 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-------~~---~~~~g~~~v~-~~~~~-~~~~~i~g~~D~vi  242 (364)
                      -++|||+||+|.+|..++..+...|.+|++++|+...       ..   ....+++.+. |.... .+...+.+ .+.++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~vi   81 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN-VDVVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT-CSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhh-ceeee
Confidence            3679999999999999999999999999999875431       11   1223333221 22222 33344446 89999


Q ss_pred             ECCCCc
Q 017901          243 DTIGAP  248 (364)
Q Consensus       243 d~~g~~  248 (364)
                      .+.+..
T Consensus        82 ~~~~~~   87 (307)
T d1qyca_          82 STVGSL   87 (307)
T ss_dssp             ECCCGG
T ss_pred             eccccc
Confidence            988764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.04  E-value=0.1  Score=44.10  Aligned_cols=98  Identities=17%  Similarity=0.266  Sum_probs=56.4

Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH----HHHHHcCCce---eeeCCChhHHHHhcC
Q 017901          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI----DRVLAAGAEQ---AVDYSSKDIELAIKG  236 (364)
Q Consensus       165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~----~~~~~~g~~~---v~~~~~~~~~~~i~g  236 (364)
                      |+.+...+.+|++||-.| +| .|.++..+|++ |+ +|+++..++..    +..++.+...   +++.+..++.... .
T Consensus        26 ai~~~~~~~~~~~VLDiG-cG-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~~-~  101 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVG-CG-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV-E  101 (311)
T ss_dssp             HHHHCGGGTTTCEEEEET-CT-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSC-S
T ss_pred             HHHhccccCCcCEEEEEC-CC-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCcc-c
Confidence            444445677899999998 44 67777766765 75 89999776653    2234444322   3333222221111 3


Q ss_pred             CccEEEEC-CC----Cchh----HHHHHhhccCCCEEEE
Q 017901          237 KFDAVLDT-IG----APET----ERLGLNFLKRGGHYMT  266 (364)
Q Consensus       237 ~~D~vid~-~g----~~~~----~~~~~~~l~~~G~~v~  266 (364)
                      ++|+|+.- .+    +...    +...-+.|+|||+++.
T Consensus       102 ~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~iip  140 (311)
T d2fyta1         102 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP  140 (311)
T ss_dssp             CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred             cceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEec
Confidence            49999752 22    1112    2334468999998873

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.98  E-value=0.15  Score=40.08  Aligned_cols=69  Identities=14%  Similarity=0.199  Sum_probs=43.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      ++|||+||+|.+|..+++.+...|.  +|++..+++..... .+  + ....+..++.+.+.+.+|.||.|+|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~-~~--~-~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP-RL--D-NPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT-TE--E-CCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc-cc--c-ccccchhhhhhccccchheeeeeeeee
Confidence            7899999999999999999888886  67776665432100 00  0 000111122223333389999999864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.94  E-value=0.25  Score=33.07  Aligned_cols=67  Identities=18%  Similarity=0.176  Sum_probs=46.3

Q ss_pred             CEEEEEcCCchHHHHH-HHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          176 QRLLVLGGGGAVGFAA-VQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~-~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      .+|-+.| -|++|..+ +++++..|+.|.+....+..  +.++++|+......+..    .+.+ +|+|+-+.+-+
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~----~i~~-~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSAD----NWYD-PDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTT----SCCC-CSEEEECTTCC
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccc----ccCC-CCEEEEecCcC
Confidence            3566778 78888754 68889999999999766543  67899998643322222    2334 89988776644

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=92.90  E-value=0.34  Score=38.77  Aligned_cols=99  Identities=12%  Similarity=0.157  Sum_probs=66.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-----HHHHHcCCceee---eCCChhHHHHh---
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-----DRVLAAGAEQAV---DYSSKDIELAI---  234 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-----~~~~~~g~~~v~---~~~~~~~~~~i---  234 (364)
                      ........++||-.|  ...|+.++.+|+.+  +.+++.+..+++.     +.+.+.|...-+   .....+..+.+   
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~  130 (227)
T d1susa1          53 MLLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKD  130 (227)
T ss_dssp             HHHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC
T ss_pred             HHHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhc
Confidence            345556778999998  56799999999886  4689998776653     345667765433   33333444433   


Q ss_pred             ---cCCccEEEE-CCCCc--hhHHHHHhhccCCCEEEEEc
Q 017901          235 ---KGKFDAVLD-TIGAP--ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       235 ---~g~~D~vid-~~g~~--~~~~~~~~~l~~~G~~v~~g  268 (364)
                         .+++|+||- +--..  ..+..++++|++||.++.=.
T Consensus       131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             cccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence               145999764 33332  36789999999999987653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.82  E-value=0.71  Score=34.00  Aligned_cols=94  Identities=11%  Similarity=0.067  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCceee-eCCChhHHHHhc-CCccEEEECCCC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGA  247 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~v~-~~~~~~~~~~i~-g~~D~vid~~g~  247 (364)
                      -+.++|.| .|.+|..+++.+...|..++++..+++.  ..   +...|...+. |..+.+..+... .++|.++-+++.
T Consensus         3 knHiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~   81 (153)
T d1id1a_           3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN   81 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcccc
Confidence            45799999 7999999999999999999988766542  22   2334554332 334445544444 449999999988


Q ss_pred             chh---HHHHHhhccCCCEEEEEcc
Q 017901          248 PET---ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       248 ~~~---~~~~~~~l~~~G~~v~~g~  269 (364)
                      +..   .....+.+.+.-+++..-.
T Consensus        82 d~~n~~~~~~~r~~~~~~~iia~~~  106 (153)
T d1id1a_          82 DADNAFVVLSAKDMSSDVKTVLAVS  106 (153)
T ss_dssp             HHHHHHHHHHHHHHTSSSCEEEECS
T ss_pred             HHHHHHHHHHHHHhCCCCceEEEEc
Confidence            622   2233445566666666543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.56  Score=36.31  Aligned_cols=34  Identities=26%  Similarity=0.454  Sum_probs=30.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ++|.|.| +|.+|...++++...|..|+....+++
T Consensus         5 kkvaViG-aG~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           5 KHVTVIG-GGLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             EEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECChH
Confidence            5799999 799999999999999999999977654

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=92.78  E-value=0.12  Score=39.42  Aligned_cols=92  Identities=15%  Similarity=0.203  Sum_probs=60.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-ccH---HHHHHcCCce--------------eeeCC-----ChhHHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSI---DRVLAAGAEQ--------------AVDYS-----SKDIELA  233 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~~---~~~~~~g~~~--------------v~~~~-----~~~~~~~  233 (364)
                      +|.|.| -|.+|.++.+.+...+.+++++..+ ...   ..+.+....+              .++..     ...-.+.
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            578999 9999999999998888899888553 332   2233322111              11100     0000111


Q ss_pred             hc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.    | +|+|+||+|.-.....+...+..|.+-|.+..+
T Consensus        81 i~W~~~g-vD~ViEcTG~f~~~~~~~~hl~~gakkViisaP  120 (169)
T d1dssg1          81 IPWSKAG-AEYIVESTGVFTTIEKASAHFKGGAKKVIISAP  120 (169)
T ss_dssp             CCHHHHT-CCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred             CCccccC-CCEEEecCceEcCHHHHHHHHhcCCceEeecCC
Confidence            11    6 999999999976788888999988877777654

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.71  E-value=0.71  Score=35.23  Aligned_cols=90  Identities=11%  Similarity=0.103  Sum_probs=59.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCc-cH--HHHHHcCCceee-eCCChhHHHHhc-CCccEEEECCCCchh
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSK-SI--DRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPET  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~-~~--~~~~~~g~~~v~-~~~~~~~~~~i~-g~~D~vid~~g~~~~  250 (364)
                      ++.|.| +|.+|...++.++.. ++++++++... +.  ....+.+..... .++  ++.+.+. ..+|+|+-|+.....
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~ll~~~~iD~v~I~tp~~~h   79 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG--SYESLLEDPEIDALYVPLPTSLH   79 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES--SHHHHHHCTTCCEEEECCCGGGH
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC--cHHHhhhccccceeeecccchhh
Confidence            578899 799999888888776 66899886543 32  445666643211 111  2333332 239999999998877


Q ss_pred             HHHHHhhccCCCEEEEEccC
Q 017901          251 ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ...+..+++.| .=|.+..+
T Consensus        80 ~~~~~~~l~~g-~~v~~EKP   98 (184)
T d1ydwa1          80 VEWAIKAAEKG-KHILLEKP   98 (184)
T ss_dssp             HHHHHHHHTTT-CEEEECSS
T ss_pred             cchhhhhhhcc-ceeecccc
Confidence            88888888876 55566554

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.69  E-value=0.39  Score=35.59  Aligned_cols=80  Identities=14%  Similarity=0.219  Sum_probs=53.0

Q ss_pred             EEEEEcCCchHHHHHHH-HHHHcCCeEEEeeCCccH-HH-HHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHH
Q 017901          177 RLLVLGGGGAVGFAAVQ-FSVASGCHVSATCGSKSI-DR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL  253 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~-~a~~~g~~vi~~~~~~~~-~~-~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~  253 (364)
                      +|.+.| +|.+|.+.++ +++.-+.++++..+++++ +. ..+.|+. +.+...     .+.. .|+||-|+-.. .+..
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~-----~v~~-~Div~lavkP~-~~~~   72 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP-----ELHS-DDVLILAVKPQ-DMEA   72 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC-----CCCT-TSEEEECSCHH-HHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc-----cccc-cceEEEecCHH-HHHH
Confidence            578889 8999998877 455444788888877664 44 4556664 322211     1334 89999999854 6777


Q ss_pred             HHhhccCCCEEE
Q 017901          254 GLNFLKRGGHYM  265 (364)
Q Consensus       254 ~~~~l~~~G~~v  265 (364)
                      .++-+++.+.++
T Consensus        73 v~~~l~~~~~~v   84 (152)
T d1yqga2          73 ACKNIRTNGALV   84 (152)
T ss_dssp             HHTTCCCTTCEE
T ss_pred             hHHHHhhcccEE
Confidence            777777665544

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=92.61  E-value=0.15  Score=43.11  Aligned_cols=71  Identities=25%  Similarity=0.370  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC--c-cHHH---HHHcCCceee--eCCCh-hHHHHhcC-CccEEEECCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS--K-SIDR---VLAAGAEQAV--DYSSK-DIELAIKG-KFDAVLDTIG  246 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~--~-~~~~---~~~~g~~~v~--~~~~~-~~~~~i~g-~~D~vid~~g  246 (364)
                      +|||+||+|-+|..+++.+...|.+|+++.+-  . ....   +...+--..+  |-.+. ++.+.+.+ ++|+||.+.+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            69999999999999999998899999998532  1 1222   2222211222  33333 34444442 2799999886


Q ss_pred             C
Q 017901          247 A  247 (364)
Q Consensus       247 ~  247 (364)
                      .
T Consensus        82 ~   82 (338)
T d1orra_          82 Q   82 (338)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.59  E-value=0.24  Score=42.08  Aligned_cols=70  Identities=20%  Similarity=0.232  Sum_probs=45.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC---cc--HHHHHHc---CCcee-eeCCCh-hHHHHhc--CCccEEEEC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS---KS--IDRVLAA---GAEQA-VDYSSK-DIELAIK--GKFDAVLDT  244 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~---~~--~~~~~~~---g~~~v-~~~~~~-~~~~~i~--g~~D~vid~  244 (364)
                      +|||+||+|-+|..++..+...|.+|+++.+.   .+  .......   ++..+ .|-.+. .+.+.+.  + +|+||.+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~-~d~ViHl   80 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHA-IDTVIHF   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTT-CSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccC-CCEEEEC
Confidence            69999999999999999999999999998542   11  1222222   23221 233333 3444444  5 9999998


Q ss_pred             CCC
Q 017901          245 IGA  247 (364)
Q Consensus       245 ~g~  247 (364)
                      .+.
T Consensus        81 Aa~   83 (338)
T d1udca_          81 AGL   83 (338)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            753

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.44  E-value=0.21  Score=39.78  Aligned_cols=100  Identities=21%  Similarity=0.238  Sum_probs=65.8

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-----HHHHHcCCceeee---CCChhHHHHh--
Q 017901          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-----DRVLAAGAEQAVD---YSSKDIELAI--  234 (364)
Q Consensus       167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-----~~~~~~g~~~v~~---~~~~~~~~~i--  234 (364)
                      .........++||-.|  ...|+.++.+|+.+  +.+++++..+++.     +.+.+.|....+.   .+..+..+.+  
T Consensus        52 ~~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~  129 (219)
T d2avda1          52 ANLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLA  129 (219)
T ss_dssp             HHHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH
T ss_pred             HHHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhh
Confidence            3455667788999998  45788888888876  4689999776653     3455667654333   2222322222  


Q ss_pred             ---cCCccEEEECCCCc---hhHHHHHhhccCCCEEEEEc
Q 017901          235 ---KGKFDAVLDTIGAP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       235 ---~g~~D~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                         .+++|+||--....   ..+..++++|++||.++.=.
T Consensus       130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn  169 (219)
T d2avda1         130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  169 (219)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence               14589877644433   35779999999999997643

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.35  E-value=0.066  Score=44.15  Aligned_cols=95  Identities=14%  Similarity=0.100  Sum_probs=60.9

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce---eeeCCChhHHHHhcCCccEE
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ---AVDYSSKDIELAIKGKFDAV  241 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~~~~~i~g~~D~v  241 (364)
                      ..+++|++||-.++  ++|..++.+|+..+++|+++..++.. +    .++..|.+.   +++.+..++...  +++|.|
T Consensus       103 ~~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~~~--~~~D~I  178 (260)
T d2frna1         103 KVAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE--NIADRI  178 (260)
T ss_dssp             HHCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC--SCEEEE
T ss_pred             hhcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhccC--CCCCEE
Confidence            34689999998873  46777778887755799999776653 3    345555532   343333232211  348966


Q ss_pred             EEC-C-CCchhHHHHHhhccCCCEEEEEc
Q 017901          242 LDT-I-GAPETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       242 id~-~-g~~~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +-. . .+...+..+++.+++||.+....
T Consensus       179 i~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         179 LMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             EECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             EECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            543 2 23457888999999999886554

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.33  E-value=0.11  Score=40.49  Aligned_cols=80  Identities=19%  Similarity=0.106  Sum_probs=55.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce------eeeCC---ChhHHHHhcCCccEEEECCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ------AVDYS---SKDIELAIKGKFDAVLDTIG  246 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~------v~~~~---~~~~~~~i~g~~D~vid~~g  246 (364)
                      +|.|.| +|..|.+.+.++...|-+|+...++++. +.+.+.+.+.      .+..+   ..++.+.+.+ .|++|-++.
T Consensus         9 KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~-ad~iiiavP   86 (189)
T d1n1ea2           9 KAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG-AEIILFVIP   86 (189)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT-CSCEEECSC
T ss_pred             eEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCC-CCEEEEcCc
Confidence            699999 8999999999998888889988887665 4444333211      11111   1245666666 999999999


Q ss_pred             CchhHHHHHhhcc
Q 017901          247 APETERLGLNFLK  259 (364)
Q Consensus       247 ~~~~~~~~~~~l~  259 (364)
                      +. .+...++.++
T Consensus        87 s~-~~~~~~~~~~   98 (189)
T d1n1ea2          87 TQ-FLRGFFEKSG   98 (189)
T ss_dssp             HH-HHHHHHHHHC
T ss_pred             HH-HHHHHHHHHH
Confidence            87 6666665544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.33  E-value=0.22  Score=35.28  Aligned_cols=42  Identities=17%  Similarity=0.211  Sum_probs=36.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.....++++++|.| +|.+|+-++..++.+|.+|..+.+.++
T Consensus        15 ~~l~~~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          15 EELDYEPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             HHCCSCCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             HHHhhCCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            445667899999999 899999999999999999999876543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.27  E-value=0.072  Score=44.42  Aligned_cols=92  Identities=14%  Similarity=0.143  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc------c---HHHH----HHc-------------------CCce
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK------S---IDRV----LAA-------------------GAEQ  221 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~------~---~~~~----~~~-------------------g~~~  221 (364)
                      .|.+|+|.| .|.+|..+++.+...|++|+++....      +   .+.+    .+.                   .+|-
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~Gld~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~DI  113 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDI  113 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEECCTTCCCHHHHHHHHHTTSSSTTCTTSCBCCSCGGGCCCSE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEccchhhccccccchHHHHHHHHHcCCeecccccccCCcccccCCccE
Confidence            578999999 99999999999999999999985321      1   1111    111                   1111


Q ss_pred             eeeCCC-----hhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          222 AVDYSS-----KDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       222 v~~~~~-----~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .+..-.     .+..+.+ + +.+|++...++ ....+.+.|...|.++.-..
T Consensus       114 liPaA~~~~I~~~~a~~l-~-ak~I~EgAN~P-~t~eA~~~L~~~gI~viPD~  163 (293)
T d1hwxa1         114 LIPAASEKQLTKSNAPRV-K-AKIIAEGANGP-TTPQADKIFLERNIMVIPDL  163 (293)
T ss_dssp             EEECSSSSCBCTTTGGGC-C-CSEEECCSSSC-BCHHHHHHHHHTTCEEECHH
T ss_pred             EeeccccccccHHHHHHH-h-hCEEeccCCCC-CCcchHHHHHHCCCEEeChh
Confidence            111000     0111122 3 78888888888 77788899999998876653

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.26  E-value=0.98  Score=34.59  Aligned_cols=34  Identities=21%  Similarity=0.222  Sum_probs=29.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ++|.|.| +|.+|...+.++...|.+|+....+++
T Consensus         5 ~~vaViG-aG~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           5 KQAAVLG-AGIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             SSEEEEC-CHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            5799999 799999999888889999999977655

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.25  E-value=0.14  Score=42.73  Aligned_cols=97  Identities=15%  Similarity=0.164  Sum_probs=58.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH----HcCCce------eeeCCChhHHHHhc-
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL----AAGAEQ------AVDYSSKDIELAIK-  235 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~----~~g~~~------v~~~~~~~~~~~i~-  235 (364)
                      ...+.+++.+||=.|  .+.|..+..+++. |++|+++..+++. +.++    ..+...      +.+.+-........ 
T Consensus        50 ~~l~~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (292)
T d1xvaa_          50 GLLRQHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA  126 (292)
T ss_dssp             HHHHHTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC
T ss_pred             HHhhhcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCC
Confidence            334456778999888  3468888888875 8999999877663 3332    222211      11111111111111 


Q ss_pred             -CCccEEEECCCC------c--------hhHHHHHhhccCCCEEEEE
Q 017901          236 -GKFDAVLDTIGA------P--------ETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       236 -g~~D~vid~~g~------~--------~~~~~~~~~l~~~G~~v~~  267 (364)
                       +++|+|+.....      .        ..+..+.+.|+|||.++.-
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~  173 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID  173 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence             348988864321      0        2578999999999998863

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=92.16  E-value=0.35  Score=36.47  Aligned_cols=92  Identities=14%  Similarity=0.155  Sum_probs=57.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCce----------------eeeCC-----ChhHHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQ----------------AVDYS-----SKDIELA  233 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~----------------v~~~~-----~~~~~~~  233 (364)
                      +|.|.| -|.+|.++.+++.... .+++++-..... ..+.-+..|.                +++..     ...-++.
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            578999 9999999999887764 578888544333 2222221111                11100     0001112


Q ss_pred             hc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.    | +|+|+||+|.-.....+...+..|.+-|.+..+
T Consensus        82 i~W~~~g-vDiViEcTG~f~t~~~~~~hl~~gakkViiSaP  121 (166)
T d1gado1          82 LKWDEVG-VDVVAEATGLFLTDETARKHITAGAKKVVMTGP  121 (166)
T ss_dssp             GCHHHHT-CSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred             CCccccC-CCEEEEccccccCHHHHHHHhcCCCceEEeecc
Confidence            21    6 999999999876777888888888777777654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.12  E-value=0.14  Score=39.83  Aligned_cols=86  Identities=15%  Similarity=0.142  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch-h--
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE-T--  250 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~-~--  250 (364)
                      .+.++.|.| .|.+|...+++++.+|.+|+...+......      ......  .++.+.+.. .|+++-+..-.+ +  
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~------~~~~~~--~~l~ell~~-sDii~i~~plt~~T~~  112 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPL------GNATQV--QHLSDLLNM-SDVVSLHVPENPSTKN  112 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCC------TTCEEC--SCHHHHHHH-CSEEEECCCSSTTTTT
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccchh------hhhhhh--hhHHHHHhh-ccceeecccCCcchhh
Confidence            578999999 999999999999999999999976543211      111111  123333333 899988776431 1  


Q ss_pred             --HHHHHhhccCCCEEEEEcc
Q 017901          251 --ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~  269 (364)
                        -...++.++++..+|.++-
T Consensus       113 li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         113 MMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             CBCHHHHHHSCTTEEEEECSC
T ss_pred             hccHHHHhhCCCCCEEEEcCc
Confidence              2578899999999998874

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.05  E-value=0.14  Score=39.48  Aligned_cols=38  Identities=24%  Similarity=0.312  Sum_probs=32.7

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ...+++|+|.| +|+.|+.++..+...|.+|+...+.++
T Consensus        40 ~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCc
Confidence            35678999999 899999999999999999998866543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.03  E-value=0.18  Score=42.86  Aligned_cols=98  Identities=24%  Similarity=0.226  Sum_probs=60.0

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-H----HHHHcCCce---eeeCCChhHHHHhc---CC
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-D----RVLAAGAEQ---AVDYSSKDIELAIK---GK  237 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~~~~~i~---g~  237 (364)
                      ..+++|++||=.++  ..|..++.+|+. |+ +|+++..+++. +    .++..|...   ++..+..++...+.   .+
T Consensus       141 ~~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         141 KWVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GGCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred             hhcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCC
Confidence            44688999987763  345555556654 65 89999777653 3    355666642   22222223333322   35


Q ss_pred             ccEEEECCCC---------------chhHHHHHhhccCCCEEEEEccC
Q 017901          238 FDAVLDTIGA---------------PETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       238 ~D~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +|+|+--...               ...+..+.++|+|||.++.+...
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            9998853221               11456788899999999988654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=91.81  E-value=0.24  Score=36.68  Aligned_cols=92  Identities=20%  Similarity=0.125  Sum_probs=50.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~  252 (364)
                      +|.|.||+|-+|+-.++++..+    ..++..+.++......-.++.+........+ .+...+ +|++|-|+++..+..
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~-~~~~~~-~DvvF~alp~~~s~~   79 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFD-IESLKQ-LDAVITCQGGSYTEK   79 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTC-HHHHTT-CSEEEECSCHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccc-hhhhcc-ccEEEEecCchHHHH
Confidence            5899999999999999866432    3466655544322111111111111110111 122234 999999999984444


Q ss_pred             HHHhhccCCC--EEEEEccC
Q 017901          253 LGLNFLKRGG--HYMTLHGE  270 (364)
Q Consensus       253 ~~~~~l~~~G--~~v~~g~~  270 (364)
                      .+-++++.+-  .+|..+..
T Consensus        80 ~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          80 VYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             HHHHHHHTTCCSEEEESSST
T ss_pred             HhHHHHHcCCceEEEeCCcc
Confidence            4444455542  47777654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.78  E-value=0.19  Score=39.07  Aligned_cols=97  Identities=12%  Similarity=0.144  Sum_probs=59.8

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCce----eeeCCChhHHHHhc-
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQ----AVDYSSKDIELAIK-  235 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~----v~~~~~~~~~~~i~-  235 (364)
                      |.+.....++++||=.|+  +.|..++.+++ .+.+|+++..++.. +.+    ...+...    ++..+   +.+.+. 
T Consensus        44 Li~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d---~~~~~~~  117 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD---LYENVKD  117 (194)
T ss_dssp             HHHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS---TTTTCTT
T ss_pred             HHHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcc---hhhhhcc
Confidence            446677889999999983  35677777765 46799999766553 333    3344321    22221   111222 


Q ss_pred             CCccEEEECCC---Cc----hhHHHHHhhccCCCEEEEEc
Q 017901          236 GKFDAVLDTIG---AP----ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       236 g~~D~vid~~g---~~----~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +++|+|+-...   +.    ..+..+.+.|+++|+++..-
T Consensus       118 ~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  157 (194)
T d1dusa_         118 RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI  157 (194)
T ss_dssp             SCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEEE
Confidence            34999986322   22    24678889999999986543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=91.78  E-value=0.85  Score=34.53  Aligned_cols=93  Identities=16%  Similarity=0.082  Sum_probs=63.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce---eeeCCChhHHHHhcCCccEEEECCCCchh-
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ---AVDYSSKDIELAIKGKFDAVLDTIGAPET-  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~---v~~~~~~~~~~~i~g~~D~vid~~g~~~~-  250 (364)
                      .+|-+.| .|.+|...+.-+...|.+|++..++.++ +.+.+.++..   .......+..+.... .|.++-++..... 
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~-~~~ii~~~~~~~~v   80 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKK-PRRIILLVKAGQAV   80 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCS-SCEEEECSCTTHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcc-cceEEEecCchHHH
Confidence            3588999 8999999999998899999999887765 5565555431   111222344444445 7888888776533 


Q ss_pred             ---HHHHHhhccCCCEEEEEccC
Q 017901          251 ---ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 ---~~~~~~~l~~~G~~v~~g~~  270 (364)
                         .......++++..++.++..
T Consensus        81 ~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHhccccCcEEEecCcc
Confidence               34566677888888877654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.77  E-value=0.1  Score=44.28  Aligned_cols=100  Identities=16%  Similarity=0.219  Sum_probs=56.8

Q ss_pred             HHH-HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH----HHHHHcCCce---eeeCCChhHHH
Q 017901          162 AWR-ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI----DRVLAAGAEQ---AVDYSSKDIEL  232 (364)
Q Consensus       162 a~~-~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~----~~~~~~g~~~---v~~~~~~~~~~  232 (364)
                      +|+ ++.+...+.+|++||-.| +| .|+++..+|+ .|+ +|+++..++..    +.++..+...   +++.+..++..
T Consensus        20 ~y~~ai~~~~~~~~~~~VLDiG-cG-~G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~   96 (316)
T d1oria_          20 TYRNSMFHNRHLFKDKVVLDVG-SG-TGILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVEL   96 (316)
T ss_dssp             HHHHHHHTCHHHHTTCEEEEET-CT-TSHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred             HHHHHHHhccccCCcCEEEEEe-cC-CcHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHccc
Confidence            443 343333456899999998 44 3777776666 576 79999766543    2234444432   23322222211


Q ss_pred             HhcCCccEEEECCCC-----c----hhHHHHHhhccCCCEEE
Q 017901          233 AIKGKFDAVLDTIGA-----P----ETERLGLNFLKRGGHYM  265 (364)
Q Consensus       233 ~i~g~~D~vid~~g~-----~----~~~~~~~~~l~~~G~~v  265 (364)
                      .. +++|+|+...-.     +    ..+...-++|+|+|+++
T Consensus        97 ~~-~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          97 PV-EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             SS-SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cc-ceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            11 348998753221     1    13445568999999887

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.73  E-value=0.3  Score=39.18  Aligned_cols=98  Identities=18%  Similarity=0.188  Sum_probs=62.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcC----CceeeeCCCh---hHHHHhcCCc
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAG----AEQAVDYSSK---DIELAIKGKF  238 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g----~~~v~~~~~~---~~~~~i~g~~  238 (364)
                      +...++||++||=.|++  .|..+..+|+.. +.+|+++..+++. +.+++.-    ....+.....   .+.+.. ..+
T Consensus        68 ~~l~ikpG~~VLDlGcG--sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~-~~v  144 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGAS--AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKV  144 (230)
T ss_dssp             CCCCCCTTCEEEEESCC--SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTC-CCE
T ss_pred             HhCCCCCCCEEEEeCEE--cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccccccc-cee
Confidence            45679999999999943  578888888874 3489999877664 4443322    1122222221   111111 126


Q ss_pred             cEEEECCCCc----hhHHHHHhhccCCCEEEEEc
Q 017901          239 DAVLDTIGAP----ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       239 D~vid~~g~~----~~~~~~~~~l~~~G~~v~~g  268 (364)
                      |+++......    ..+.++.+.|++||.++..-
T Consensus       145 ~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            7777766542    24678889999999988764

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=91.72  E-value=0.12  Score=40.05  Aligned_cols=91  Identities=15%  Similarity=0.139  Sum_probs=54.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCce-eee-CCChhHHH-HhcCCccEEEECCCCchhH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQ-AVD-YSSKDIEL-AIKGKFDAVLDTIGAPETE  251 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~-v~~-~~~~~~~~-~i~g~~D~vid~~g~~~~~  251 (364)
                      +|.|.||+|-+|+-.++++..+-. ++..+.++... ....+..... ..+ .......+ ...+ +|++|.|.+.. ..
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Dvvf~alp~~-~s   84 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSN-VDAVFCCLPHG-TT   84 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGG-CSEEEECCSSS-HH
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcc-cceeeeccccc-hH
Confidence            589999999999999999988753 66666544332 1111111100 000 00000011 1114 99999999998 55


Q ss_pred             HHHHhhccCCCEEEEEcc
Q 017901          252 RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~  269 (364)
                      ......+...+.++....
T Consensus        85 ~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          85 QEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             HHHHHTSCSSCEEEECSS
T ss_pred             HHHHHHHHhcCcccccch
Confidence            566677888888876654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.65  E-value=0.83  Score=36.63  Aligned_cols=35  Identities=23%  Similarity=0.355  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHcCCeEEEeeCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFS-VASGCHVSATCGS  208 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a-~~~g~~vi~~~~~  208 (364)
                      -.|.+|+|.| .|.+|..+++++ +..|++|+++...
T Consensus        30 l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            3689999999 899999999876 4679999998654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.46  E-value=0.1  Score=34.13  Aligned_cols=34  Identities=24%  Similarity=0.213  Sum_probs=29.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ++|.|.| +|.+|.+.++.++.+|.++.+.+..++
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            4789999 899999999999999999998876544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.43  E-value=0.55  Score=34.48  Aligned_cols=71  Identities=18%  Similarity=0.229  Sum_probs=47.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccHHHHHHcC-Cceee----eCCChhHHHHhcCCccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDRVLAAG-AEQAV----DYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~~~~~~~g-~~~v~----~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      +|.|.||+|.+|..++.++...+.  ++..+..++.+..+.++. +....    .....+..+.+++ .|+|+-+.|.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~-aDivVitag~~   79 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKG-CDVVVIPAGVP   79 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTT-CSEEEECCSCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCC-CCEEEECCCcC
Confidence            688999889999999999988876  455555454444443433 11111    1234466777777 99999998853

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.18  E-value=0.22  Score=39.35  Aligned_cols=93  Identities=16%  Similarity=0.163  Sum_probs=58.0

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCc-eeeeCCChhHHHHhcCCccEEEEC
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE-QAVDYSSKDIELAIKGKFDAVLDT  244 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~-~v~~~~~~~~~~~i~g~~D~vid~  244 (364)
                      .++++.+||=.| +| .|..+..+++. |++|+++..++.. +.+    ...+.. ..+..+..++...- +.+|+|+-.
T Consensus        34 ~l~~~~~ILDiG-cG-~G~~~~~la~~-~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~-~~fD~I~~~  109 (226)
T d1ve3a1          34 YMKKRGKVLDLA-CG-VGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFED-KTFDYVIFI  109 (226)
T ss_dssp             SCCSCCEEEEET-CT-TSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCT-TCEEEEEEE
T ss_pred             hcCCCCEEEEEC-CC-cchhhhhHhhh-hcccccccccccchhhhhhhhccccccccccccccccccccC-cCceEEEEe
Confidence            467889999998 33 48888888874 8899999777653 333    334432 12222222211000 349998764


Q ss_pred             CC-----Cc---hhHHHHHhhccCCCEEEEE
Q 017901          245 IG-----AP---ETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       245 ~g-----~~---~~~~~~~~~l~~~G~~v~~  267 (364)
                      ..     ..   ..+..+.+.|+|||+++..
T Consensus       110 ~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         110 DSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             SCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            33     11   2477899999999998765

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=91.03  E-value=1.7  Score=31.68  Aligned_cols=73  Identities=16%  Similarity=0.170  Sum_probs=49.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChh----HHHHhc---CCccEEEECCCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD----IELAIK---GKFDAVLDTIGA  247 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~----~~~~i~---g~~D~vid~~g~  247 (364)
                      ++|.|.|+.|.+|...+..++..|..|.+..++... ......+++.++......    ....+.   .+=.+++|+...
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~Sv   89 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTSV   89 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEEEeccc
Confidence            579999988999999999999999999999876654 444445666555443321    122222   113578888776


Q ss_pred             c
Q 017901          248 P  248 (364)
Q Consensus       248 ~  248 (364)
                      .
T Consensus        90 k   90 (152)
T d2pv7a2          90 K   90 (152)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=90.99  E-value=0.51  Score=35.68  Aligned_cols=92  Identities=16%  Similarity=0.186  Sum_probs=56.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc---CCeEEEeeCCccH---HHHHHcCCce--------------eeeCC-----ChhHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS---GCHVSATCGSKSI---DRVLAAGAEQ--------------AVDYS-----SKDIE  231 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~---g~~vi~~~~~~~~---~~~~~~g~~~--------------v~~~~-----~~~~~  231 (364)
                      +|.|.| -|.+|.++.+.+...   ..+|+++-.....   ..+.+....+              +++..     ...-+
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            588999 999999999988653   3688888443332   2232222110              01100     00001


Q ss_pred             HHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          232 LAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       232 ~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.+.    | +|+|+||+|.-.....+...+..|-+-|.+..+
T Consensus        81 ~~i~W~~~g-vD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP  122 (169)
T d1hdgo1          81 SKLPWKDLG-VDFVIESTGVFRNREKAELHLQAGAKKVIITAP  122 (169)
T ss_dssp             GGSCHHHHT-CCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             hhCCccccC-CCEEEEecceeccccchhhhccCCCceEEEecc
Confidence            1221    6 999999999876778888888888766666554

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.93  E-value=0.26  Score=34.83  Aligned_cols=39  Identities=10%  Similarity=0.228  Sum_probs=33.9

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      .++..++++|.| +|.+|.-++..+..+|.+|..+.+.++
T Consensus        18 ~l~~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          18 NIKESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             TCCCCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             ccCCCCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence            455678999999 899999999999999999999987654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.86  E-value=0.35  Score=41.14  Aligned_cols=71  Identities=23%  Similarity=0.306  Sum_probs=45.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc--cH---HHH---HHcCCcee-eeCCCh-hHHHHhc--CCccEEEE
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SI---DRV---LAAGAEQA-VDYSSK-DIELAIK--GKFDAVLD  243 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~--~~---~~~---~~~g~~~v-~~~~~~-~~~~~i~--g~~D~vid  243 (364)
                      +.|||+||+|-+|..++..+...|.+|+++.+..  ..   ...   ..-+...+ .|-.+. ++.....  + +|+||.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYK-IDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSC-CCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccC-CCEEEE
Confidence            5789999999999999999999999999985321  11   111   22223211 233333 3333333  5 999999


Q ss_pred             CCCC
Q 017901          244 TIGA  247 (364)
Q Consensus       244 ~~g~  247 (364)
                      +.+.
T Consensus        81 lAa~   84 (347)
T d1z45a2          81 FAGL   84 (347)
T ss_dssp             CCSC
T ss_pred             cccc
Confidence            8774

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.72  E-value=0.16  Score=43.19  Aligned_cols=69  Identities=20%  Similarity=0.157  Sum_probs=44.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHH-HHcCCceeeeC--CC-hhHHH-HhcCCccEEEECCCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRV-LAAGAEQAVDY--SS-KDIEL-AIKGKFDAVLDTIGA  247 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~-~~~g~~~v~~~--~~-~~~~~-~i~g~~D~vid~~g~  247 (364)
                      +|||+||+|-+|..+++.+...| .+|+++.+.... ... ....+. .+..  ++ .++.+ ...+ +|+||.+.+-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~-~i~~Di~~~~~~~~~~~~~-~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHVKK-CDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHHHHHHH-CSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeE-EEECccCChHHHHHHHHhC-CCcccccccc
Confidence            69999999999999998888888 589998654332 222 111222 2222  22 23333 2335 9999998875

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=90.69  E-value=0.55  Score=35.69  Aligned_cols=92  Identities=14%  Similarity=0.155  Sum_probs=56.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccH---HHHHHcCCce--------------eeeCC-----ChhH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSI---DRVLAAGAEQ--------------AVDYS-----SKDI  230 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~---~~~~~~g~~~--------------v~~~~-----~~~~  230 (364)
                      +|.|.| -|.+|.++.+.+...    ..+|+++-.....   ..+.+....+              +++..     ...-
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            578999 999999999887643    2467777543333   2232222111              11100     0001


Q ss_pred             HHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          231 ELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       231 ~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ++.+.    | +|+|+||+|.-.....+...|..|.+-|.+..+
T Consensus        82 p~~i~W~~~g-vDiViEcTG~f~~~~~a~~hl~~GakkViiSAP  124 (173)
T d1obfo1          82 PAQLPWGALK-VDVVLECTGFFTTKEKAGAHIKGGAKKVIISAP  124 (173)
T ss_dssp             GGGSCTTTTT-CSEEEECSSSCCSHHHHHHHHHHTCSEEEESSC
T ss_pred             HHHCcccccc-cceEEEecccccCHHHHHHHhccCCcceEEecC
Confidence            12221    5 999999999865777888888888877777654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.68  E-value=0.41  Score=34.05  Aligned_cols=44  Identities=23%  Similarity=0.250  Sum_probs=35.5

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.+...-..+++++|.| +|.+|+-++..+..+|.+|..+.+.++
T Consensus        21 i~~~~~~~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          21 LKQKTVDPEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             HHHHHTCTTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             HHHHhhccCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            33444456678999999 899999999999999999999866543

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=90.47  E-value=0.23  Score=37.72  Aligned_cols=84  Identities=10%  Similarity=0.119  Sum_probs=56.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGL  255 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~  255 (364)
                      +|.|.| .|.+|...+..++.. +++++++++.....    .....+..+.  +....... +|+|+.|++.......+.
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~----~~~~~~~~~~--~~~~~~~~-~D~Vvi~tp~~~h~~~a~   76 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL----DTKTPVFDVA--DVDKHADD-VDVLFLCMGSATDIPEQA   76 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC----SSSSCEEEGG--GGGGTTTT-CSEEEECSCTTTHHHHHH
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccc----ccccccccch--hhhhhccc-cceEEEeCCCcccHHHHH
Confidence            588999 899999888877765 56888885433221    0111122221  12222224 999999999987888999


Q ss_pred             hhccCCCEEEEEc
Q 017901          256 NFLKRGGHYMTLH  268 (364)
Q Consensus       256 ~~l~~~G~~v~~g  268 (364)
                      ++|+.|-.+|++-
T Consensus        77 ~aL~aG~~vv~~~   89 (170)
T d1f06a1          77 PKFAQFACTVDTY   89 (170)
T ss_dssp             HHHTTTSEEECCC
T ss_pred             HHHHCCCcEEEec
Confidence            9999998887653

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.26  E-value=0.36  Score=37.45  Aligned_cols=92  Identities=22%  Similarity=0.256  Sum_probs=57.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCcee--eeCCChhHHHHhcCCccEEEEC
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQA--VDYSSKDIELAIKGKFDAVLDT  244 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v--~~~~~~~~~~~i~g~~D~vid~  244 (364)
                      +++| +||-.| +| .|..+..+++ .|++|+++.-++.. +    .+.+.+.+.+  ...+-.++.  ..+.+|+|+..
T Consensus        29 ~~~g-rvLDiG-cG-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~fD~I~~~  102 (198)
T d2i6ga1          29 VAPG-RTLDLG-CG-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT--FDGEYDFILST  102 (198)
T ss_dssp             SCSC-EEEEET-CT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC--CCCCEEEEEEE
T ss_pred             CCCC-cEEEEC-CC-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc--ccccccEEEEe
Confidence            3444 899998 44 8888888876 48999999776653 3    2445555422  111111111  11349999863


Q ss_pred             C-----CCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          245 I-----GAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       245 ~-----g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .     ..+   ..+..+.++|+++|.++....
T Consensus       103 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1         103 VVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             SCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             eeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            2     111   356788889999999887643

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=90.25  E-value=0.33  Score=39.83  Aligned_cols=93  Identities=16%  Similarity=0.113  Sum_probs=60.5

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCce-eeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      ..++.+||=.|  .+.|..+..+++.. +.+++++..++.. +.+++..... .+..+..++.-. .+.+|+|+....-.
T Consensus        82 ~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~~-~~sfD~v~~~~~~~  158 (268)
T d1p91a_          82 DDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFS-DTSMDAIIRIYAPC  158 (268)
T ss_dssp             CTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBC-TTCEEEEEEESCCC
T ss_pred             CCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccCC-CCCEEEEeecCCHH
Confidence            45677888888  33577777788775 6799999777664 5565544332 222221111100 13499999765544


Q ss_pred             hhHHHHHhhccCCCEEEEEc
Q 017901          249 ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g  268 (364)
                       .+.++.+.|+|||.++...
T Consensus       159 -~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         159 -KAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             -CHHHHHHHEEEEEEEEEEE
T ss_pred             -HHHHHHHHhCCCcEEEEEe
Confidence             7889999999999999875

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=90.18  E-value=0.37  Score=39.13  Aligned_cols=100  Identities=16%  Similarity=0.143  Sum_probs=61.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH----HHHHHcCCceeeeCCChhHHHHhcCCccEEE
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI----DRVLAAGAEQAVDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~----~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vi  242 (364)
                      ....+.+..+||=.|  ++.|..+..+++.. +.+++++..++..    +.+.+.+...-+.....++.+...+++|+|+
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~~~~~D~v~  151 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAII  151 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEE
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccCHHHHHHHHHHHHHhhcccchhhccccchhhcccchhhee
Confidence            445667788999888  44788999999887 5678877665432    2334444322121111122111112389987


Q ss_pred             ECC-----CCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          243 DTI-----GAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       243 d~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      -..     ..+   ..+.++.+.|+|||+++....
T Consensus       152 ~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         152 LSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             eccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            542     222   247889999999999988754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.00  E-value=0.79  Score=33.74  Aligned_cols=86  Identities=15%  Similarity=0.111  Sum_probs=53.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGL  255 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~  255 (364)
                      +|.|.| .|.+|...+.-++..|..|++..+.... ..++..+.. +.+. .   .+.+.. .|+||-|+..+.....+.
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~-~---~e~~~~-~diIi~~v~~~~~~~~~~   74 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVG-VTET-S---EEDVYS-CPVVISAVTPGVALGAAR   74 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHT-CEEC-C---HHHHHT-SSEEEECSCGGGHHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccc-cccc-H---HHHHhh-cCeEEEEecCchHHHHHH
Confidence            577888 8999999999999999999887655443 333322332 1221 1   223334 899999998875544443


Q ss_pred             hhcc-CCCEEEEEcc
Q 017901          256 NFLK-RGGHYMTLHG  269 (364)
Q Consensus       256 ~~l~-~~G~~v~~g~  269 (364)
                      .... .+..++.+..
T Consensus        75 ~~~~~~~~~~id~st   89 (152)
T d1i36a2          75 RAGRHVRGIYVDINN   89 (152)
T ss_dssp             HHHTTCCSEEEECSC
T ss_pred             hhcccCCceeeccCc
Confidence            3333 2345555543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.92  E-value=0.32  Score=34.23  Aligned_cols=37  Identities=24%  Similarity=0.361  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.+++++|.| +|.+|.-+++.+..+|.+|..+.+.++
T Consensus        20 ~~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          20 EVPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hcCCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            3457899999 899999999999999999999977665

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=89.84  E-value=0.56  Score=35.46  Aligned_cols=92  Identities=15%  Similarity=0.169  Sum_probs=57.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCC-ccH---HHHHHcCCce--------------eeeCC-----ChhHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGS-KSI---DRVLAAGAEQ--------------AVDYS-----SKDIEL  232 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~-~~~---~~~~~~g~~~--------------v~~~~-----~~~~~~  232 (364)
                      +|.|.| -|.+|.++.+++... ..+++++..+ ...   ..+.+....+              .++..     ...-.+
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            588999 999999999888665 4688888553 332   2233322111              01100     000112


Q ss_pred             Hhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          233 AIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       233 ~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+.    | +|+|+||+|.-.....+...+..|.+-|.+..+
T Consensus        82 ~i~W~~~~-vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP  122 (169)
T d1u8fo1          82 KIKWGDAG-AEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP  122 (169)
T ss_dssp             GCCTTTTT-CCEEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred             hCCccccC-CCEEEEecceeccHHHHHHHHhcCCceEeeccc
Confidence            222    5 999999999876777788888888877777654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.68  E-value=0.24  Score=37.93  Aligned_cols=46  Identities=11%  Similarity=0.095  Sum_probs=32.5

Q ss_pred             HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       164 ~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      .+|.+...--.+++|+|.| +|+.+.+++..+...| ++..+.|+.++
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~k   52 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEK   52 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHH
T ss_pred             HHHHHhCCCcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhH
Confidence            3444444445788999999 7889998887775555 77777777554

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=89.64  E-value=4.2  Score=33.16  Aligned_cols=100  Identities=16%  Similarity=0.179  Sum_probs=62.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC---CccH-HHHHHcCCceeeeCCChhH-------------
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG---SKSI-DRVLAAGAEQAVDYSSKDI-------------  230 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~---~~~~-~~~~~~g~~~v~~~~~~~~-------------  230 (364)
                      +...+.++.+|+... +|..|++++..++.+|.+++++..   ++.+ +.++.+|++.++...+.+.             
T Consensus        53 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          53 KRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HTTSCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeeeec-ccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            445556666555544 899999999999999997766633   2222 6678888874332211100             


Q ss_pred             ----------------------HHHh----cCCccEEEECCCCchhH---HHHHhhccCCCEEEEEc
Q 017901          231 ----------------------ELAI----KGKFDAVLDTIGAPETE---RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       231 ----------------------~~~i----~g~~D~vid~~g~~~~~---~~~~~~l~~~G~~v~~g  268 (364)
                                            ..++    .+++|.++-++|+..++   ...++...+..+++.+.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                                  0111    13599999999976444   35555566777777654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.64  E-value=0.33  Score=39.50  Aligned_cols=34  Identities=21%  Similarity=0.298  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~  207 (364)
                      -.|.+|+|.| .|.+|..+++.+...|++|+++..
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            4789999999 999999999999999999999854

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=89.53  E-value=0.62  Score=39.23  Aligned_cols=96  Identities=21%  Similarity=0.188  Sum_probs=58.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce--eeeCCChhHHHHhc---CCccEE
Q 017901          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ--AVDYSSKDIELAIK---GKFDAV  241 (364)
Q Consensus       172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~--v~~~~~~~~~~~i~---g~~D~v  241 (364)
                      ..+|++||=.+ +|. |..++++|+ .+++|+++..+++.     +.+...|.+.  .+..+..++.+...   +++|+|
T Consensus       143 ~~~g~rVLDl~-~gt-G~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~V  219 (318)
T d1wxxa2         143 RFRGERALDVF-SYA-GGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV  219 (318)
T ss_dssp             GCCEEEEEEET-CTT-THHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             HhCCCeeeccC-CCC-cHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence            34688888776 333 444556665 36699999777653     3345667653  33344344444332   359998


Q ss_pred             EECCC-----Cc----------hhHHHHHhhccCCCEEEEEccC
Q 017901          242 LDTIG-----AP----------ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       242 id~~g-----~~----------~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +--..     ..          ..+..++++|+|||.++.+...
T Consensus       220 i~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         220 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            75221     11          1346788899999999988754

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.41  E-value=0.26  Score=37.79  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=31.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      +|.|.||+|.+|.+.++.+...|.+|+...|++++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            57888778999999999999999999999888664

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=89.12  E-value=0.32  Score=38.65  Aligned_cols=96  Identities=14%  Similarity=0.070  Sum_probs=58.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHH---cCCeEEEeeCCccH-HHHHH----cCCceeeeCCChhHHHHhcCCccEEE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVA---SGCHVSATCGSKSI-DRVLA----AGAEQAVDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~---~g~~vi~~~~~~~~-~~~~~----~g~~~v~~~~~~~~~~~i~g~~D~vi  242 (364)
                      .++++.+||-.| + +.|..+..+++.   .+++|+++.-++.. +.+++    .+....+.....+..+.-.+++|+++
T Consensus        36 ~~~~~~~vLDlG-C-GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~  113 (225)
T d1im8a_          36 FVTADSNVYDLG-C-SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVI  113 (225)
T ss_dssp             HCCTTCEEEEES-C-TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEE
T ss_pred             hcCCCCEEEEec-c-chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeE
Confidence            368899999998 3 357777777775   47899999877764 44433    33322221111111111112367766


Q ss_pred             ECCCC-----c---hhHHHHHhhccCCCEEEEEc
Q 017901          243 DTIGA-----P---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       243 d~~g~-----~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                      -+..-     +   ..+..+.+.|+|||.++...
T Consensus       114 ~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         114 LNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            54331     1   35889999999999999764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.99  E-value=0.42  Score=33.81  Aligned_cols=37  Identities=19%  Similarity=0.256  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.+++++|.| +|.+|.-+++.++.+|.+|..+.+.++
T Consensus        20 ~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          20 NVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3458899999 899999999999999999999976654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.94  E-value=0.22  Score=38.36  Aligned_cols=35  Identities=14%  Similarity=0.315  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKS  210 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~  210 (364)
                      +++|+|.| +|+.|+.++..++.+|.+ |+.+.+.+.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            67899999 899999999999999985 877766554

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.91  E-value=0.15  Score=37.79  Aligned_cols=90  Identities=20%  Similarity=0.158  Sum_probs=55.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc---CCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHHhcCCccEEEECCCCchh
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVAS---GCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELAIKGKFDAVLDTIGAPET  250 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~---g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~i~g~~D~vid~~g~~~~  250 (364)
                      -+|.|.||+|-+|+-.++++..+   ..++..+.++... +.....+.+..+ +....+    ..+ +|++|-|.+...+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~----~~~-~d~vf~a~p~~~s   77 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFD----FSS-VGLAFFAAAAEVS   77 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCC----GGG-CSEEEECSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhh----hcc-ceEEEecCCcchh
Confidence            46899999999999999999643   3467666554332 111111111111 111111    113 9999999998856


Q ss_pred             HHHHHhhccCCCEEEEEccC
Q 017901          251 ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ....-..+..+.+++..+..
T Consensus        78 ~~~~~~~~~~g~~VID~Ss~   97 (144)
T d2hjsa1          78 RAHAERARAAGCSVIDLSGA   97 (144)
T ss_dssp             HHHHHHHHHTTCEEEETTCT
T ss_pred             hhhccccccCCceEEeechh
Confidence            66666777788888887754

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.90  E-value=0.22  Score=42.31  Aligned_cols=32  Identities=22%  Similarity=0.312  Sum_probs=29.1

Q ss_pred             EE-EEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          177 RL-LVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       177 ~v-li~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      +| ||+||+|-+|..++..+...|.+|+++.+.
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            57 999999999999999999999999999764

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=88.65  E-value=3  Score=32.95  Aligned_cols=92  Identities=14%  Similarity=0.134  Sum_probs=57.9

Q ss_pred             CEEEEEcCCch----HHHHHHHHHHHc--CCeEEEeeCCcc-H--HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECC
Q 017901          176 QRLLVLGGGGA----VGFAAVQFSVAS--GCHVSATCGSKS-I--DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTI  245 (364)
Q Consensus       176 ~~vli~g~~g~----~G~~~~~~a~~~--g~~vi~~~~~~~-~--~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~  245 (364)
                      =+|.|.| .|.    ++.......+..  +++++++++... .  ..+.+++......+++  +.+.+. ..+|+|+.|+
T Consensus        17 irvgiIG-~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~iD~V~i~t   93 (237)
T d2nvwa1          17 IRVGFVG-LTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDS--LESFAQYKDIDMIVVSV   93 (237)
T ss_dssp             EEEEEEC-CCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESC--HHHHHHCTTCSEEEECS
T ss_pred             eEEEEEe-cCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecc--hhhcccccccceeeccC
Confidence            4688999 444    444445555543  578999876543 2  4567777654433332  233332 2399999999


Q ss_pred             CCchhHHHHHhhccCC-----CEEEEEccC
Q 017901          246 GAPETERLGLNFLKRG-----GHYMTLHGE  270 (364)
Q Consensus       246 g~~~~~~~~~~~l~~~-----G~~v~~g~~  270 (364)
                      ........+..+|..|     +.-|++..+
T Consensus        94 p~~~h~~~~~~al~aG~~~~~~k~V~~EKP  123 (237)
T d2nvwa1          94 KVPEHYEVVKNILEHSSQNLNLRYLYVEWA  123 (237)
T ss_dssp             CHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred             CCcchhhHHHHHHHhcccccCCceEEEecc
Confidence            9876777777777655     466788765

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=88.63  E-value=0.076  Score=40.33  Aligned_cols=90  Identities=24%  Similarity=0.296  Sum_probs=54.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHc----CC--ceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAA----GA--EQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~----g~--~~v~~~~~~~~~~~i~g~~D~vid~~g~~  248 (364)
                      +|.|+|++|.+|+..++++... ++++++...++.. ..-...    +.  ..+....  ++ +.+..++|+++|.+-..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~--~~-~~~~~~~DViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQS--SL-DAVKDDFDVFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEES--CS-TTTTTSCSEEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeec--cH-HHHhcccceEEEeccHH
Confidence            5899999999999999988775 6677766443221 100001    10  0000000  11 11212389999998876


Q ss_pred             hhHHHHHhhccCCCEEEEEccC
Q 017901          249 ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                       .....++.....|.-+.+|..
T Consensus        83 -~~~~~~~~a~~~~~~~ViGTT  103 (162)
T d1diha1          83 -GTLNHLAFCRQHGKGMVIGTT  103 (162)
T ss_dssp             -HHHHHHHHHHHTTCEEEECCC
T ss_pred             -HHHHHHHHHHhccceeEEecC
Confidence             666777777777777777754

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.45  E-value=1.3  Score=33.31  Aligned_cols=90  Identities=17%  Similarity=0.170  Sum_probs=57.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCC-ccH---HHHHHcCCce--------------eee--------CCCh-
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGS-KSI---DRVLAAGAEQ--------------AVD--------YSSK-  228 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~-~~~---~~~~~~g~~~--------------v~~--------~~~~-  228 (364)
                      +|.|.| -|.+|.++.+.+... ..+++++-.+ ...   ..+.+....+              .++        .++. 
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            578999 999999999988765 4578887543 232   2333322110              011        1111 


Q ss_pred             --hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          229 --DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       229 --~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                        .|.+.  | +|+|+||+|.-.....+...+..|.+-|.+..+
T Consensus        81 ~i~W~~~--g-vdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  121 (166)
T d2b4ro1          81 QIPWGKC--Q-VDVVCESTGVFLTKELASSHLKGGAKKVIMSAP  121 (166)
T ss_dssp             GCCHHHH--T-CSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred             Hcccccc--C-CCEEEEecccccchhhhhhhhccCCCEEEEecc
Confidence              11111  6 999999999876777888888888766666544

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=88.42  E-value=0.35  Score=39.19  Aligned_cols=95  Identities=15%  Similarity=0.149  Sum_probs=56.6

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH----HcCCc-ee--eeCCChhHHHHhcCCccEEE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL----AAGAE-QA--VDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~----~~g~~-~v--~~~~~~~~~~~i~g~~D~vi  242 (364)
                      .++++++||=.| +| .|..+..+++....+|+++..++.. +.++    ..+.. .+  +..+.........+++|+|+
T Consensus        21 ~~~~~~~VLDlG-CG-~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~   98 (252)
T d1ri5a_          21 YTKRGDSVLDLG-CG-KGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVIS   98 (252)
T ss_dssp             HCCTTCEEEEET-CT-TTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred             hCCCcCEEEEec-cc-CcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEE
Confidence            467899999998 44 3666778877655689999877664 4443    33332 11  11111000000113499987


Q ss_pred             ECCCCc----------hhHHHHHhhccCCCEEEEE
Q 017901          243 DTIGAP----------ETERLGLNFLKRGGHYMTL  267 (364)
Q Consensus       243 d~~g~~----------~~~~~~~~~l~~~G~~v~~  267 (364)
                      ....-.          ..+..+.+.|++||+++..
T Consensus        99 ~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          99 SQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            643321          2456778899999998865

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.38  E-value=1.1  Score=33.60  Aligned_cols=92  Identities=18%  Similarity=0.170  Sum_probs=56.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC----CeEEEeeCCccH-------------HHHHHcCCceeeeCCChhHHHHhc--CC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG----CHVSATCGSKSI-------------DRVLAAGAEQAVDYSSKDIELAIK--GK  237 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g----~~vi~~~~~~~~-------------~~~~~~g~~~v~~~~~~~~~~~i~--g~  237 (364)
                      +|.+.| .|.+|...+++.....    .++.++..+...             .....+.....-......+...+.  ..
T Consensus         6 ~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (168)
T d1ebfa1           6 NVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPK   84 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSS
T ss_pred             EEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhcccccccHHHHHHHhccCCC
Confidence            478888 9999999998887643    256666543221             001111111011111122333333  12


Q ss_pred             ccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .++++||.++........++|..|=++|+...
T Consensus        85 ~~vivd~t~~~~~~~~~~~aL~~G~hVVTANK  116 (168)
T d1ebfa1          85 PVILVDNTSSAYIAGFYTKFVENGISIATPNK  116 (168)
T ss_dssp             CEEEEECSCCHHHHTTHHHHHHTTCEEECCCC
T ss_pred             ceEEEEecCChHHHHHHHHHHHcCCeEEecCc
Confidence            78999999998788888899999999998864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.38  E-value=0.46  Score=33.74  Aligned_cols=36  Identities=22%  Similarity=0.333  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ..++++|.| +|.+|+-+++++..+|.+|..+.+.++
T Consensus        22 ~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          22 IPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence            347899999 899999999999999999999876654

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.21  E-value=0.47  Score=37.49  Aligned_cols=96  Identities=18%  Similarity=0.190  Sum_probs=56.8

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-----HHHHHcCCce---eeeCCChhHHHHhc---
Q 017901          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-----DRVLAAGAEQ---AVDYSSKDIELAIK---  235 (364)
Q Consensus       169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-----~~~~~~g~~~---v~~~~~~~~~~~i~---  235 (364)
                      .....+.++||-.|  ...|..++.+|+.+  +.+|+++..+++.     ..++..|...   ++..+..+....+.   
T Consensus        51 lv~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~  128 (214)
T d2cl5a1          51 VIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKY  128 (214)
T ss_dssp             HHHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHS
T ss_pred             HHHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcc
Confidence            34445668999998  34678888888875  5699999776552     3346667643   22222222222221   


Q ss_pred             --CCccEEEECCCCch-----hHHHHHhhccCCCEEEE
Q 017901          236 --GKFDAVLDTIGAPE-----TERLGLNFLKRGGHYMT  266 (364)
Q Consensus       236 --g~~D~vid~~g~~~-----~~~~~~~~l~~~G~~v~  266 (364)
                        +++|++|--.....     .+..++++|++||.++.
T Consensus       129 ~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         129 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             CCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence              34898764322221     14456678999997653

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.18  E-value=0.34  Score=41.06  Aligned_cols=96  Identities=19%  Similarity=0.179  Sum_probs=54.0

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH----HHHHHcCCce---eeeCCChhHHHHhcCC
Q 017901          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI----DRVLAAGAEQ---AVDYSSKDIELAIKGK  237 (364)
Q Consensus       166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~----~~~~~~g~~~---v~~~~~~~~~~~i~g~  237 (364)
                      +.+.....+|++||-.| +| .|.++..+|+ .|+ +|+++..++..    +..++.+...   ++..+..++.- -..+
T Consensus        30 I~~~~~~~~~~~VLDlG-cG-tG~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~-~~~~  105 (328)
T d1g6q1_          30 IIQNKDLFKDKIVLDVG-CG-TGILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHL-PFPK  105 (328)
T ss_dssp             HHHHHHHHTTCEEEEET-CT-TSHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC-SSSC
T ss_pred             HHhccccCCcCEEEEeC-CC-CCHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccC-cccc
Confidence            33334556899999998 44 4666665555 576 89999766532    2344555432   23332222210 0134


Q ss_pred             ccEEEECCC-----Cc----hhHHHHHhhccCCCEEE
Q 017901          238 FDAVLDTIG-----AP----ETERLGLNFLKRGGHYM  265 (364)
Q Consensus       238 ~D~vid~~g-----~~----~~~~~~~~~l~~~G~~v  265 (364)
                      +|+|+...-     ..    ..+...-++|+|||.++
T Consensus       106 ~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         106 VDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            999876321     11    12344457899999886

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.05  E-value=0.9  Score=35.28  Aligned_cols=69  Identities=25%  Similarity=0.291  Sum_probs=46.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCC----------------hhHHHHhcCCcc
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSS----------------KDIELAIKGKFD  239 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~----------------~~~~~~i~g~~D  239 (364)
                      +|.|.| .|-+|+.++..+...|.+|+++..++++ +.+.+ |.........                .++.+.+.. .|
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~-g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~-~d   78 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ-GKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLD-SD   78 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-TCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHT-CS
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc-cCCcccchhhhhhhhhhhcccccccCCCHHHHHhh-CC
Confidence            578888 8999999999998899999999877665 33332 2221111111                123333435 89


Q ss_pred             EEEECCCCc
Q 017901          240 AVLDTIGAP  248 (364)
Q Consensus       240 ~vid~~g~~  248 (364)
                      ++|-|++.+
T Consensus        79 ~i~i~VpTP   87 (202)
T d1mv8a2          79 VSFICVGTP   87 (202)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEecCcc
Confidence            999999874

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=88.02  E-value=0.45  Score=36.16  Aligned_cols=92  Identities=15%  Similarity=0.174  Sum_probs=54.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CeEEEeeCCccH---HHHHHcCCce------e---------eeCC-----ChhH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASG---CHVSATCGSKSI---DRVLAAGAEQ------A---------VDYS-----SKDI  230 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g---~~vi~~~~~~~~---~~~~~~g~~~------v---------~~~~-----~~~~  230 (364)
                      +|.|.| -|.+|.++.+.+....   .+++++-.....   ..+.+....+      +         ++..     ...-
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~   80 (172)
T d1rm4a1           2 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN   80 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence            578999 9999999999776543   467777444333   2222222110      1         1100     0000


Q ss_pred             HHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          231 ELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       231 ~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +..+.    | +|+|+||+|.-.....+...+..|-+-|.+..+
T Consensus        81 p~~i~W~~~g-vDiViEcTG~f~~~~~~~~hl~~GakkViiSAP  123 (172)
T d1rm4a1          81 PVNLPWGDMG-IDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAP  123 (172)
T ss_dssp             GGGSCHHHHT-CCEEEECSSSCCBHHHHHHHHHTTCSCEEESSC
T ss_pred             hHHCChhhcC-CCEEEecCceEccHHHHHHHHhcCCceEEeecc
Confidence            11111    6 999999999865677777888888755666544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=87.99  E-value=0.35  Score=39.75  Aligned_cols=61  Identities=16%  Similarity=0.265  Sum_probs=37.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh-hHHHHhcC-CccEEEECCCC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~i~g-~~D~vid~~g~  247 (364)
                      +|||+||+|.+|..++..+...|. ++++.+....         ...|..+. .+.+.+.+ ++|+||.|.+-
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~---------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE---------FCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS---------SCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc---------ccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            699999999999999888777664 4554433221         01122232 23333331 27999998873

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=87.90  E-value=0.78  Score=36.27  Aligned_cols=90  Identities=16%  Similarity=0.168  Sum_probs=57.0

Q ss_pred             EEEEEcCCchHHHH-HHHHHHH-cCCeEEEeeCCc-cH--HHHHHcCCce--eeeCCChhHHHHhc-CCccEEEECCCCc
Q 017901          177 RLLVLGGGGAVGFA-AVQFSVA-SGCHVSATCGSK-SI--DRVLAAGAEQ--AVDYSSKDIELAIK-GKFDAVLDTIGAP  248 (364)
Q Consensus       177 ~vli~g~~g~~G~~-~~~~a~~-~g~~vi~~~~~~-~~--~~~~~~g~~~--v~~~~~~~~~~~i~-g~~D~vid~~g~~  248 (364)
                      +|.|.| +|.+|.- .....+. -+.+++++++.. ++  ..++++|.+.  +..+++  +.+.+. ..+|+|+-|+...
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d--~~ell~~~~iD~V~I~tp~~  111 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--FDKIAKDPKIDAVYIILPNS  111 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--GGGGGGCTTCCEEEECSCGG
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc--hhhhcccccceeeeeccchh
Confidence            678999 7888863 3343333 377899886643 32  4567777642  222322  223333 2399999999988


Q ss_pred             hhHHHHHhhccCCCEEEEEccC
Q 017901          249 ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .....+..+++.| .=|.+..+
T Consensus       112 ~H~~~~~~al~~g-k~v~~EKP  132 (221)
T d1h6da1         112 LHAEFAIRAFKAG-KHVMCEKP  132 (221)
T ss_dssp             GHHHHHHHHHHTT-CEEEECSS
T ss_pred             hhhhHHHHhhhcc-hhhhcCCC
Confidence            6778888888765 55566554

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=87.88  E-value=0.3  Score=40.15  Aligned_cols=35  Identities=26%  Similarity=0.342  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +++|+|.| +|..|+.++..++..|.+|..+...++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~   35 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK   35 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            57899999 899999999999999999998865543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.84  E-value=0.33  Score=41.18  Aligned_cols=35  Identities=14%  Similarity=0.144  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~  207 (364)
                      ...+++||+||+|-+|..++..+...|.+|+++++
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            34578999999999999999999999999999864

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=87.63  E-value=0.49  Score=39.38  Aligned_cols=33  Identities=24%  Similarity=0.176  Sum_probs=29.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      ++|||+||+|-+|..+++.+...|..++++.+.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            479999999999999999999999988877544

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.60  E-value=2.2  Score=30.14  Aligned_cols=90  Identities=13%  Similarity=0.124  Sum_probs=58.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHHhc-CCccEEEECCCCch---h
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPE---T  250 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~i~-g~~D~vid~~g~~~---~  250 (364)
                      .++|.| .|.+|..+++.++  +..++++..+++. +.++..|...+. |.++.+...... .+++.++-++..+.   .
T Consensus         2 HivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~~   78 (129)
T d2fy8a1           2 HVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETIH   78 (129)
T ss_dssp             CEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhHH
Confidence            578888 7999998888765  4456666655554 666777775332 333444444433 44999999998762   2


Q ss_pred             HHHHHhhccCCCEEEEEcc
Q 017901          251 ERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~  269 (364)
                      +-..++.+.|..+++....
T Consensus        79 ~~~~~r~~~~~~~iia~~~   97 (129)
T d2fy8a1          79 CILGIRKIDESVRIIAEAE   97 (129)
T ss_dssp             HHHHHHHHCSSSCEEEECS
T ss_pred             HHHHHHHHCCCceEEEEEc
Confidence            3355566778877776654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.56  E-value=0.51  Score=33.12  Aligned_cols=35  Identities=17%  Similarity=0.167  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      .++++|.| +|.+|+-+++.++.+|.+|..+.+.++
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            47899999 899999999999999999999876553

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.49  E-value=0.78  Score=33.03  Aligned_cols=40  Identities=23%  Similarity=0.463  Sum_probs=34.3

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ..++++++++|.| +|.+|+-++..++..|.+|..+.+.++
T Consensus        30 ~~~~~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          30 RQLIADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             HTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             HhhccCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            3456789999999 899999999999999999999876544

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=87.39  E-value=0.32  Score=41.70  Aligned_cols=33  Identities=21%  Similarity=0.248  Sum_probs=29.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      +.|||+||+|-+|..++..+...|.+|+++.+.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            578999999999999999999999999999874

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.35  E-value=0.39  Score=34.18  Aligned_cols=37  Identities=19%  Similarity=0.253  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.+++++|.| +|.+|+-+++++..+|.+|..+.+.++
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            4468999999 899999999999999999999977654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=86.97  E-value=0.47  Score=38.16  Aligned_cols=34  Identities=26%  Similarity=0.381  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      ..++|+|.| +|..|++++..++..|.+|+.+.++
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            467899999 8999999999999999999988653

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.96  E-value=2.8  Score=34.90  Aligned_cols=101  Identities=20%  Similarity=0.172  Sum_probs=64.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC---CccH-HHHHHcCCceeeeCCC----------------
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG---SKSI-DRVLAAGAEQAVDYSS----------------  227 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~---~~~~-~~~~~~g~~~v~~~~~----------------  227 (364)
                      +...++++...+|...+|..|++++.+++.+|.+.+.+..   ++.+ +.++.+|++.+.....                
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence            4556667767777777999999999999999997666632   2222 6678888864432110                


Q ss_pred             ------------h------------hHHHHhcCCccEEEECCCCchhHH---HHHhhccCCCEEEEEc
Q 017901          228 ------------K------------DIELAIKGKFDAVLDTIGAPETER---LGLNFLKRGGHYMTLH  268 (364)
Q Consensus       228 ------------~------------~~~~~i~g~~D~vid~~g~~~~~~---~~~~~l~~~G~~v~~g  268 (364)
                                  .            ++.+++.+++|.++-++|+..++.   ..++...+.-+++-+.
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                        0            001111145899999999874443   4445556677777554

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=86.64  E-value=2.6  Score=35.25  Aligned_cols=106  Identities=13%  Similarity=0.132  Sum_probs=65.1

Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc---c-HHHHHHcCCceeeeCCChhH-------
Q 017901          162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK---S-IDRVLAAGAEQAVDYSSKDI-------  230 (364)
Q Consensus       162 a~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~---~-~~~~~~~g~~~v~~~~~~~~-------  230 (364)
                      |++.+.....-.+..+|+... +|..|.+++..++..|.+++.+....   . ...++.+|++-+......+.       
T Consensus        62 a~~~i~~~~~~~~~~~vv~as-sGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITAS-AGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEE-CSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecc-cchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhh
Confidence            455553333333445555544 89999999999999999877764322   2 26678889875442211100       


Q ss_pred             -------------------------HHHhc---CCccEEEECCCCchhH---HHHHhhccCCCEEEEEc
Q 017901          231 -------------------------ELAIK---GKFDAVLDTIGAPETE---RLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       231 -------------------------~~~i~---g~~D~vid~~g~~~~~---~~~~~~l~~~G~~v~~g  268 (364)
                                               ..++.   +.+|.||-++|+..++   -..++.+.+..+++.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                                     00000   3599999999986443   45556666777888774

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.60  E-value=0.51  Score=33.49  Aligned_cols=34  Identities=24%  Similarity=0.301  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      .+++++|.| +|.+|+-++++++.+|.+|..+.++
T Consensus        19 ~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            456899999 8999999999999999999988765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.44  E-value=0.69  Score=32.89  Aligned_cols=35  Identities=17%  Similarity=0.235  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      .++++|.| +|.+|+-++..++.+|.+|+.+.+.++
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            47899999 899999999999999999999977654

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.33  E-value=7  Score=32.87  Aligned_cols=101  Identities=18%  Similarity=0.203  Sum_probs=64.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc---cH-HHHHHcCCceeeeCCC----------------
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK---SI-DRVLAAGAEQAVDYSS----------------  227 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~---~~-~~~~~~g~~~v~~~~~----------------  227 (364)
                      +...+++++.|+... +|..|.+++.+|+.+|.+.+.+....   .+ +.++.+|++.+.....                
T Consensus        90 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPT-SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHTCSCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HcCCcccCceEEEec-ccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            445666777655555 89999999999999999877664322   22 6788899874431100                


Q ss_pred             ----------------h-----------hHHHHhcCCccEEEECCCCchhH---HHHHhhccCCCEEEEEcc
Q 017901          228 ----------------K-----------DIELAIKGKFDAVLDTIGAPETE---RLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       228 ----------------~-----------~~~~~i~g~~D~vid~~g~~~~~---~~~~~~l~~~G~~v~~g~  269 (364)
                                      .           ++.+++.+++|.++-++|+..++   -..++...++-+++.+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                            0           00111114599999999986443   345555667778876653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.04  E-value=0.66  Score=32.40  Aligned_cols=35  Identities=29%  Similarity=0.375  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +++++|.| +|.+|.-+++.++.+|.+|..+.+.++
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            47899999 899999999999999999998876544

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=85.82  E-value=3.8  Score=30.55  Aligned_cols=92  Identities=14%  Similarity=0.089  Sum_probs=60.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee------eCCChhHHHHhcCCccEEEECCCCch
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV------DYSSKDIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~------~~~~~~~~~~i~g~~D~vid~~g~~~  249 (364)
                      +|-+.| .|.+|...+.-+...|.+|++..+++++ +.+.+.+.....      .....++...+.. .+.++.++....
T Consensus         3 kIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   80 (178)
T d1pgja2           3 DVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKK-PRKALILVQAGA   80 (178)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCS-SCEEEECCCCSH
T ss_pred             EEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhccc-ceEEEEeecCcc
Confidence            477889 9999999999999999999998887765 555555543211      1111233333333 677777777643


Q ss_pred             h----HHHHHhhccCCCEEEEEccC
Q 017901          250 T----ERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 ~----~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .    +......+.++..++.++..
T Consensus        81 ~~~~~~~~~~~~~~~~~iii~~st~  105 (178)
T d1pgja2          81 ATDSTIEQLKKVFEKGDILVDTGNA  105 (178)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECCCC
T ss_pred             hhhhhhhhhhhhccccceecccCcc
Confidence            3    35666678888888777643

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.81  E-value=1.9  Score=33.73  Aligned_cols=108  Identities=19%  Similarity=0.199  Sum_probs=57.9

Q ss_pred             hHHHHHHHHHHhcccCCCCEEEEEcCCchH---HHHHHHHHHHcCCeEEEeeCCccH--------HHHHHcCCceeeeCC
Q 017901          158 AALTAWRALKCAARMSEGQRLLVLGGGGAV---GFAAVQFSVASGCHVSATCGSKSI--------DRVLAAGAEQAVDYS  226 (364)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~vli~g~~g~~---G~~~~~~a~~~g~~vi~~~~~~~~--------~~~~~~g~~~v~~~~  226 (364)
                      ++..+++.+.+...-....+|+|.-|.|.-   |+++++.++..|++|.++...++.        ....+++...+ +..
T Consensus        23 Ag~~~a~~i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  101 (211)
T d2ax3a2          23 AGISVVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-EQF  101 (211)
T ss_dssp             HHHHHHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE-SCC
T ss_pred             HHHHHHHHHHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHHHcCCccc-ccc
Confidence            343444445444332334566666546655   477777777779988777432221        23455555432 222


Q ss_pred             ChhHHHHhcCCccEEEECCCCc-------hhHHHHHhhccCCC-EEEEEccC
Q 017901          227 SKDIELAIKGKFDAVLDTIGAP-------ETERLGLNFLKRGG-HYMTLHGE  270 (364)
Q Consensus       227 ~~~~~~~i~g~~D~vid~~g~~-------~~~~~~~~~l~~~G-~~v~~g~~  270 (364)
                      ...   .... +|+++|+.=+.       ..+...++.+.... .++.+-.+
T Consensus       102 ~~~---~~~~-~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiP  149 (211)
T d2ax3a2         102 EPS---ILNE-FDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVP  149 (211)
T ss_dssp             CGG---GGGG-CSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSC
T ss_pred             ccc---cccC-ceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccC
Confidence            211   1123 89999986321       24566677776554 56666655

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.79  E-value=0.69  Score=32.96  Aligned_cols=37  Identities=19%  Similarity=0.338  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.+++++|.| +|.+|+-++++.+.+|.+|..+.+.++
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            4468999999 899999999999999999999976553

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.46  E-value=0.43  Score=40.47  Aligned_cols=31  Identities=26%  Similarity=0.362  Sum_probs=28.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCeEEEee
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~  206 (364)
                      ++|||+||+|-+|...+..+...|.+|+++.
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            6899999999999999999999999999984

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=85.16  E-value=0.53  Score=35.68  Aligned_cols=92  Identities=14%  Similarity=0.190  Sum_probs=56.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH---HHHHHcCCce--------------eeeCC-----ChhHHHH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI---DRVLAAGAEQ--------------AVDYS-----SKDIELA  233 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~---~~~~~~g~~~--------------v~~~~-----~~~~~~~  233 (364)
                      +|.|.| -|.+|.++.+.+... ..+++++-.....   ..+.+....+              .++..     ...-+..
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            578999 999999999888654 4578888543333   2222222110              00000     0001111


Q ss_pred             hc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901          234 IK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       234 i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      +.    | +|+|+||+|.-.....+...+..|-+-|.+..+
T Consensus        82 i~W~~~~-vDiViEcTG~f~t~~~~~~hl~~gakkViiSap  121 (171)
T d3cmco1          82 LAWGEIG-VDIVVESTGRFTKREDAAKHLEAGAKKVIISAP  121 (171)
T ss_dssp             CCTGGGT-CCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             ccccccC-CcEEEEecCccCCHHHHHHHHhCCCceEEEecc
Confidence            11    5 999999999876777888888888766666544

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=85.12  E-value=2  Score=35.86  Aligned_cols=94  Identities=20%  Similarity=0.192  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcC------C-----ceeeeCCChhHHHHhcCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAG------A-----EQAVDYSSKDIELAIKGKFD  239 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g------~-----~~v~~~~~~~~~~~i~g~~D  239 (364)
                      ...++|||.|+  +.|..+-.++++.. .+|.++.-+++. +.+++.-      +     -+++..+...+.....+++|
T Consensus        76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yD  153 (312)
T d1uira_          76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD  153 (312)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred             CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCccc
Confidence            55689999994  34666677777654 478888666553 4443321      1     12333333344444445699


Q ss_pred             EEE-ECC---CC--c-------hhHHHHHhhccCCCEEEEEc
Q 017901          240 AVL-DTI---GA--P-------ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       240 ~vi-d~~---g~--~-------~~~~~~~~~l~~~G~~v~~g  268 (364)
                      +|| |..   +.  +       +-+..+.++|+++|.++.-.
T Consensus       154 vIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence            976 432   21  1       13578889999999988754

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.11  E-value=1.2  Score=36.86  Aligned_cols=95  Identities=15%  Similarity=0.173  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCC-------c---eeeeCCChhHHHHhcCCccE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGA-------E---QAVDYSSKDIELAIKGKFDA  240 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~-------~---~v~~~~~~~~~~~i~g~~D~  240 (364)
                      ...++|||.|++  -|..+-.++++.+ .+|.++.-+++- +.+++.-.       +   +++..+...+.....+++|+
T Consensus        88 ~~pk~VLiiGgG--~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv  165 (295)
T d1inla_          88 PNPKKVLIIGGG--DGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDV  165 (295)
T ss_dssp             SSCCEEEEEECT--TCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred             CCCceEEEecCC--chHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCE
Confidence            456899999943  3555667777665 478887666553 44443221       0   12222222333322245999


Q ss_pred             EE-ECCC----------CchhHHHHHhhccCCCEEEEEcc
Q 017901          241 VL-DTIG----------APETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       241 vi-d~~g----------~~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      || |+..          +.+-+..+.++|+++|.++.-..
T Consensus       166 Ii~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         166 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            76 3321          11236789999999999987654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.07  E-value=0.69  Score=36.76  Aligned_cols=38  Identities=26%  Similarity=0.407  Sum_probs=33.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      +.+++|+|.| +|+.|+.++..++..|.+|+.+...++.
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecccc
Confidence            4678999999 8999999999999999999998766553

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=84.40  E-value=0.94  Score=36.68  Aligned_cols=100  Identities=19%  Similarity=0.146  Sum_probs=61.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH----HHHHHcCCceeeeCCChhHHHHhcCCccEEE
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI----DRVLAAGAEQAVDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~----~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vi  242 (364)
                      ....+....+||=.|  |+.|..+..++++. +.+++++..++..    +.+.+.|....+.....++.+....++|+|+
T Consensus        75 ~~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~~~~~~~~ri~~~~~d~~~~~p~~~D~v~  152 (256)
T d1qzza2          75 DAYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVL  152 (256)
T ss_dssp             HTSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEE
T ss_pred             hcCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecChHHHHHHHHHHhhcCCcceeeeeeeeccccccccchhhh
Confidence            444567778898888  45789999999987 5688888765432    2334444332221111122222221289887


Q ss_pred             ECC-----CCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          243 DTI-----GAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       243 d~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      -.-     ..+   ..+.++.+.|+|||+++.+..
T Consensus       153 ~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         153 LSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            532     211   246788999999999998764

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.30  E-value=0.57  Score=36.96  Aligned_cols=96  Identities=10%  Similarity=0.006  Sum_probs=60.3

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcC----Cce--eeeCCChhHHHHhcCCccEEEE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAG----AEQ--AVDYSSKDIELAIKGKFDAVLD  243 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g----~~~--v~~~~~~~~~~~i~g~~D~vid  243 (364)
                      ...++.+||=.|  ++.|..+..+++..+.+|+++.-+++. +.+++..    ...  .+..+-.++... .+++|+|+.
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~~-~~~fD~I~~  133 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPE-PDSYDVIWI  133 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCC-SSCEEEEEE
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccccccccccc-ccccccccc
Confidence            346678899888  446888888877777799999776664 5554432    211  222222222111 134899987


Q ss_pred             C-----CCCc---hhHHHHHhhccCCCEEEEEcc
Q 017901          244 T-----IGAP---ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       244 ~-----~g~~---~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      .     +..+   ..+..+.+.|+++|.++....
T Consensus       134 ~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         134 QWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            3     3322   357888999999999987743

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=84.21  E-value=2.4  Score=31.97  Aligned_cols=88  Identities=11%  Similarity=0.139  Sum_probs=53.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHH----HcCCceeeeCCCh-hHHHHhcCCccEEEECCCCch
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVL----AAGAEQAVDYSSK-DIELAIKGKFDAVLDTIGAPE  249 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~----~~g~~~v~~~~~~-~~~~~i~g~~D~vid~~g~~~  249 (364)
                      +|.|.||+|-+|.-.++++..+.. ++..+.++... +.+.    .+-.+..+...+. ++.+   + +|++|-|.+.. 
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~~~---~-~dvvf~a~p~~-   77 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSK---N-CDVLFTALPAG-   77 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHH---H-CSEEEECCSTT-
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhHhcc---c-cceEEEccccH-
Confidence            588999999999999999987754 66666544332 2121    1112222222222 2222   4 89999999998 


Q ss_pred             hHHHHHhhccCCCEEEEEccC
Q 017901          250 TERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ......... .+-++|..+..
T Consensus        78 ~s~~~~~~~-~~~~VIDlSad   97 (176)
T d1vkna1          78 ASYDLVREL-KGVKIIDLGAD   97 (176)
T ss_dssp             HHHHHHTTC-CSCEEEESSST
T ss_pred             HHHHHHHhh-ccceEEecCcc
Confidence            444444433 56678777653

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=83.66  E-value=0.39  Score=35.46  Aligned_cols=82  Identities=10%  Similarity=-0.012  Sum_probs=45.8

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCeEE-EeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHHh
Q 017901          179 LVLGGGGAVGFAAVQFSVASGCHVS-ATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLN  256 (364)
Q Consensus       179 li~g~~g~~G~~~~~~a~~~g~~vi-~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~  256 (364)
                      -+.| +|.+|...++.++. +..+. ...|+.++ +.+.+.+.....+..     +.+.. .|+||-|+... .+.....
T Consensus         3 gfIG-~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~-----~~~~~-~DiVil~v~d~-~i~~v~~   73 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAATLE-----KHPEL-NGVVFVIVPDR-YIKTVAN   73 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSC-----CCCC----CEEECSCTT-THHHHHT
T ss_pred             EEEe-CcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccchh-----hhhcc-CcEEEEeccch-hhhHHHh
Confidence            3667 89999988876654 44443 34555554 444444443232211     12223 89999999877 7777788


Q ss_pred             hcc-CCCEEEEEcc
Q 017901          257 FLK-RGGHYMTLHG  269 (364)
Q Consensus       257 ~l~-~~G~~v~~g~  269 (364)
                      .++ ++..++.+..
T Consensus        74 ~l~~~~~ivi~~s~   87 (153)
T d2i76a2          74 HLNLGDAVLVHCSG   87 (153)
T ss_dssp             TTCCSSCCEEECCS
T ss_pred             hhcccceeeeeccc
Confidence            786 4555566654

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=83.66  E-value=2.7  Score=34.96  Aligned_cols=96  Identities=15%  Similarity=0.100  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCc----------eeeeCCChhHHHHhcCCccE
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAE----------QAVDYSSKDIELAIKGKFDA  240 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~----------~v~~~~~~~~~~~i~g~~D~  240 (364)
                      ...++|||.|+  +-|..+-.++++... +|.++.-+++- +.+++.-..          +++..+...+......++|+
T Consensus       105 ~~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred             CCCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCE
Confidence            45678999983  346666677777664 67777665554 555553211          11111222333332345999


Q ss_pred             EEECCCC----c------hhHHHHHhhccCCCEEEEEccC
Q 017901          241 VLDTIGA----P------ETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       241 vid~~g~----~------~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      ||--+..    +      .-+..+.++|+++|.++.-+..
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~s  222 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES  222 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecCC
Confidence            8742221    1      1257888899999999987643

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=83.65  E-value=3.3  Score=30.94  Aligned_cols=94  Identities=15%  Similarity=0.159  Sum_probs=52.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc-eeeeCCChhHHHHhc---CCccEE
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE-QAVDYSSKDIELAIK---GKFDAV  241 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~-~v~~~~~~~~~~~i~---g~~D~v  241 (364)
                      .+..|.+||=.++  +.|...+.++ ..|++|+++..+++.     +.++.++.. .+...+...+.....   .++|+|
T Consensus        38 ~~~~g~~vLDl~~--G~G~~~i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~I  114 (171)
T d1ws6a1          38 RYPRRGRFLDPFA--GSGAVGLEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVA  114 (171)
T ss_dssp             HCTTCCEEEEETC--SSCHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             cccCCCeEEEecc--ccchhhhhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCcccee
Confidence            4677888876653  2333444433 469999987666553     234566654 344443333332222   459998


Q ss_pred             EEC----CCCchhHHHHH--hhccCCCEEEEE
Q 017901          242 LDT----IGAPETERLGL--NFLKRGGHYMTL  267 (364)
Q Consensus       242 id~----~g~~~~~~~~~--~~l~~~G~~v~~  267 (364)
                      |--    .+-...+...+  .+++++|.++.-
T Consensus       115 f~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         115 FMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             EECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             EEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            742    22222444443  368899987754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.62  E-value=0.54  Score=34.65  Aligned_cols=33  Identities=27%  Similarity=0.683  Sum_probs=29.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~  206 (364)
                      -.|++|||.| +|.+|..-+..+...|++|+.+.
T Consensus        11 l~gkrvLViG-gG~va~~ka~~Ll~~GA~VtVva   43 (150)
T d1kyqa1          11 LKDKRILLIG-GGEVGLTRLYKLMPTGCKLTLVS   43 (150)
T ss_dssp             CTTCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEE
T ss_pred             eCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEe
Confidence            3688999999 69999999999999999988884

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=83.34  E-value=5  Score=33.04  Aligned_cols=55  Identities=15%  Similarity=0.250  Sum_probs=38.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-Cc--cH-HHHHHcCCceee
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SK--SI-DRVLAAGAEQAV  223 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~--~~-~~~~~~g~~~v~  223 (364)
                      +...+.+++.|+... +|.-|++++..++.+|.+.+.+.. ..  .+ ..++.+|+..+.
T Consensus        54 ~~g~~~~~~~vv~~S-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          54 KDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             HTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HcCCCCCCceeeeec-CCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence            445567777655555 999999999999999997665532 22  22 567788876543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=83.15  E-value=0.91  Score=36.27  Aligned_cols=89  Identities=18%  Similarity=0.154  Sum_probs=55.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCc-eeeeCCChhHHHHhcCCccEEEECCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIG  246 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~-~v~~~~~~~~~~~i~g~~D~vid~~g  246 (364)
                      .++++||=.| +| .|..+..+++ .|.+|+++..++.. +.+    ...+.. .++..+-.++.  ..+++|+|+...+
T Consensus        36 ~~~~~vLDiG-CG-~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~i~~~~~  110 (246)
T d1y8ca_          36 LVFDDYLDLA-CG-TGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN--INRKFDLITCCLD  110 (246)
T ss_dssp             CCTTEEEEET-CT-TSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC--CSCCEEEEEECTT
T ss_pred             CCCCeEEEEe-Cc-CCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhhhc--ccccccccceeee
Confidence            4467899988 34 5777777776 48899999877663 433    334432 23322222221  1245999986433


Q ss_pred             C------c----hhHHHHHhhccCCCEEEE
Q 017901          247 A------P----ETERLGLNFLKRGGHYMT  266 (364)
Q Consensus       247 ~------~----~~~~~~~~~l~~~G~~v~  266 (364)
                      .      .    ..+..+.++|+|||.++.
T Consensus       111 ~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            2      1    246789999999999885

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=83.01  E-value=0.81  Score=37.93  Aligned_cols=39  Identities=21%  Similarity=0.387  Sum_probs=32.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      .....++|+|.| +|..|+.++..+...|.+|..+...++
T Consensus        26 ~~~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          26 ATSNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             CCSSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            345667999999 899999999999999999998866544

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=82.37  E-value=7  Score=29.97  Aligned_cols=93  Identities=12%  Similarity=0.119  Sum_probs=60.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-----HHHHHcCCcee--eeCCChhHHHHhc-CCccEEEECC
Q 017901          175 GQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-----DRVLAAGAEQA--VDYSSKDIELAIK-GKFDAVLDTI  245 (364)
Q Consensus       175 g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~~~~~~i~-g~~D~vid~~  245 (364)
                      +..||=.|  .+.|..++.+|+.. ...++++..+...     +.+.+.+.+.+  +..+...+.+... +.+|.|+-..
T Consensus        30 ~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v~i~f  107 (204)
T d2fcaa1          30 NPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF  107 (204)
T ss_dssp             CCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred             CceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhcccCchhhhcccccc
Confidence            34566666  44688888899876 5689999665542     34567777643  3333344444443 3488877654


Q ss_pred             CCc--------------hhHHHHHhhccCCCEEEEEcc
Q 017901          246 GAP--------------ETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       246 g~~--------------~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      ..+              ..+..+.+.|+|||.+.....
T Consensus       108 p~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~TD  145 (204)
T d2fcaa1         108 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD  145 (204)
T ss_dssp             CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred             ccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEEC
Confidence            442              367888999999999987643

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=82.23  E-value=1.8  Score=34.89  Aligned_cols=99  Identities=11%  Similarity=0.021  Sum_probs=61.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC-ceeeeCCChhHHHHh--cCCccEEEE
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA-EQAVDYSSKDIELAI--KGKFDAVLD  243 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~-~~v~~~~~~~~~~~i--~g~~D~vid  243 (364)
                      ......++.+||=.|  ++.|..+..++.....+|.++..++.. +.+++.-. ...+++...++.+.-  .+++|+|+.
T Consensus        87 ~~l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~  164 (254)
T d1xtpa_          87 ASLPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVI  164 (254)
T ss_dssp             HTSTTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEE
T ss_pred             hhCCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEe
Confidence            445556778888888  346888888887777789999777664 55554322 112222111111110  135999877


Q ss_pred             CCC-----Cc---hhHHHHHhhccCCCEEEEEc
Q 017901          244 TIG-----AP---ETERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       244 ~~g-----~~---~~~~~~~~~l~~~G~~v~~g  268 (364)
                      .--     .+   ..+..+.+.|+++|.++..-
T Consensus       165 ~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         165 QWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            432     22   24788899999999998754

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.03  E-value=4.1  Score=33.27  Aligned_cols=97  Identities=18%  Similarity=0.132  Sum_probs=55.9

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-----HHHHHcCCceee-eCCChhHHHHhc-CCccEE
Q 017901          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-----DRVLAAGAEQAV-DYSSKDIELAIK-GKFDAV  241 (364)
Q Consensus       170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-----~~~~~~g~~~v~-~~~~~~~~~~i~-g~~D~v  241 (364)
                      ...++|++||=.. +++=|- +++++... +.+|++...+..+     +.++++|...+. ...+........ +++|.|
T Consensus        98 L~~~~g~~vLD~C-AaPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fd~I  175 (284)
T d1sqga2          98 LAPQNGEHILDLC-AAPGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRI  175 (284)
T ss_dssp             HCCCTTCEEEEES-CTTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred             cCccccceeEecc-Cccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchhcccccccEE
Confidence            4678899887664 222232 23444333 3579998655442     446788886433 222222222222 348876


Q ss_pred             E-E--CCCCchh-------------------------HHHHHhhccCCCEEEEEc
Q 017901          242 L-D--TIGAPET-------------------------ERLGLNFLKRGGHYMTLH  268 (364)
Q Consensus       242 i-d--~~g~~~~-------------------------~~~~~~~l~~~G~~v~~g  268 (364)
                      + |  |+|....                         +..+++++++||++|..-
T Consensus       176 L~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsT  230 (284)
T d1sqga2         176 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  230 (284)
T ss_dssp             EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence            5 4  6665411                         478888999999888554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.90  E-value=2.2  Score=31.08  Aligned_cols=70  Identities=20%  Similarity=0.178  Sum_probs=41.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH----HHHHHcC-------Cc-eeeeCCChhHHHHhcCCccEEE
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI----DRVLAAG-------AE-QAVDYSSKDIELAIKGKFDAVL  242 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~----~~~~~~g-------~~-~v~~~~~~~~~~~i~g~~D~vi  242 (364)
                      +|.|.||+|.+|..++.++...+.  ++..+..++..    ..+.++.       .. ++.... .+..+.+++ .|+|+
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~-~~d~~~l~~-aDvVV   79 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES-DENLRIIDE-SDVVI   79 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE-TTCGGGGTT-CSEEE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCC-cchHHHhcc-ceEEE
Confidence            588999889999999999988884  55555544432    1111111       11 111111 112334556 99999


Q ss_pred             ECCCCc
Q 017901          243 DTIGAP  248 (364)
Q Consensus       243 d~~g~~  248 (364)
                      -|.|.+
T Consensus        80 itAG~~   85 (145)
T d1hyea1          80 ITSGVP   85 (145)
T ss_dssp             ECCSCC
T ss_pred             Eecccc
Confidence            998864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.32  E-value=1.3  Score=31.17  Aligned_cols=37  Identities=19%  Similarity=0.376  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      +.+++++|.| +|.+|+-+++.+..+|.+|..+.+.+.
T Consensus        30 ~~~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          30 ENSGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HHHSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             hcCCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            4457899999 899999999999999999998876654

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.07  E-value=2.2  Score=34.89  Aligned_cols=94  Identities=18%  Similarity=0.135  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcC-------------Cc---eeeeCCChhHHHHhc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAG-------------AE---QAVDYSSKDIELAIK  235 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g-------------~~---~v~~~~~~~~~~~i~  235 (364)
                      .+.++|||.|++  -|..+-.++++-..+|.++.-+++- +.+++.-             .+   +++..+...+.+.- 
T Consensus        71 ~~p~~vLiiG~G--~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~-  147 (276)
T d1mjfa_          71 PKPKRVLVIGGG--DGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNN-  147 (276)
T ss_dssp             SCCCEEEEEECT--TSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHC-
T ss_pred             CCCceEEEecCC--chHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhcc-
Confidence            566899999843  3455555566544577777555443 5554322             11   23333333344332 


Q ss_pred             CCccEEEE-CCCC---------chhHHHHHhhccCCCEEEEEcc
Q 017901          236 GKFDAVLD-TIGA---------PETERLGLNFLKRGGHYMTLHG  269 (364)
Q Consensus       236 g~~D~vid-~~g~---------~~~~~~~~~~l~~~G~~v~~g~  269 (364)
                      +++|+||- +...         .+-+..+.++|+++|.++.-.+
T Consensus       148 ~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~~  191 (276)
T d1mjfa_         148 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG  191 (276)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEecC
Confidence            34999754 4332         1236788999999999987653

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.92  E-value=7.5  Score=32.18  Aligned_cols=90  Identities=11%  Similarity=0.128  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CC-eEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHhcCCccEEEECC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVAS-GC-HVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTI  245 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~-g~-~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~  245 (364)
                      +...++.|.| +|..+...++.+... .. +|.+..++.++     +.+...+.....+     ..+.+.+ .|+|+-|+
T Consensus       123 ~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~-----~~~a~~~-aDiV~taT  195 (320)
T d1omoa_         123 KNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ-----PAEEASR-CDVLVTTT  195 (320)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC-----CHHHHTS-SSEEEECC
T ss_pred             CCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc-----hhhhhcc-ccEEEEec
Confidence            4557889999 899998888777653 44 66666666553     2234555443322     2344556 99999998


Q ss_pred             CCchhHHHHHhhccCCCEEEEEccC
Q 017901          246 GAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       246 g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+...+ .-.+.+++|-++..+|..
T Consensus       196 ~s~~P~-~~~~~l~~G~hv~~iGs~  219 (320)
T d1omoa_         196 PSRKPV-VKAEWVEEGTHINAIGAD  219 (320)
T ss_dssp             CCSSCC-BCGGGCCTTCEEEECSCC
T ss_pred             cCcccc-cchhhcCCCCeEeecCCc
Confidence            875322 223579999999999865

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=80.77  E-value=1.3  Score=35.04  Aligned_cols=35  Identities=23%  Similarity=0.456  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~  208 (364)
                      +..++|+|.| +|..|++++..+...|.+|..+.+.
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3456899999 8999999999999999999888764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=80.70  E-value=1.8  Score=31.65  Aligned_cols=47  Identities=15%  Similarity=0.203  Sum_probs=38.2

Q ss_pred             HHHHHHHHhcccCCCCEEEEE--cCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          161 TAWRALKCAARMSEGQRLLVL--GGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       161 ta~~~l~~~~~~~~g~~vli~--g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      |....+  ..+..+++.++|.  | +|-+|+-+++.+..+|++|..+.+.+.
T Consensus        27 t~~d~l--~~~~~~~~~vvi~d~g-gg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          27 TPEQVM--DGKKKIGKRVVILNAD-TYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CHHHHH--HTCSCCCSEEEEEECC-CSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CHHHHh--cCccccCCceEEEecC-CChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            556665  3567788888876  5 799999999999999999999987654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=80.57  E-value=2.1  Score=35.90  Aligned_cols=71  Identities=17%  Similarity=0.183  Sum_probs=40.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCe--EEEeeCC---ccHHHHHHc---CCcee-eeCCChhHHH-HhcCCccEEEECC
Q 017901          176 QRLLVLGGGGAVGFAAVQFSVASGCH--VSATCGS---KSIDRVLAA---GAEQA-VDYSSKDIEL-AIKGKFDAVLDTI  245 (364)
Q Consensus       176 ~~vli~g~~g~~G~~~~~~a~~~g~~--vi~~~~~---~~~~~~~~~---g~~~v-~~~~~~~~~~-~i~g~~D~vid~~  245 (364)
                      .+|||+||+|.+|..++..+...|..  |+++...   ........+   +...+ .|.++.+... ...+ .|.|+.+.
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~-~~~v~~~a   81 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK-ADAIVHYA   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT-CSEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhh-hhhhhhhh
Confidence            57999999999999999888877865  5544321   111211111   11111 2333333333 3335 88888876


Q ss_pred             CC
Q 017901          246 GA  247 (364)
Q Consensus       246 g~  247 (364)
                      +.
T Consensus        82 ~~   83 (346)
T d1oc2a_          82 AE   83 (346)
T ss_dssp             SC
T ss_pred             hc
Confidence            64

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=80.50  E-value=2.9  Score=32.14  Aligned_cols=70  Identities=17%  Similarity=0.166  Sum_probs=41.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCc-eeeeCCChhHHHHhcCCccEEEEC
Q 017901          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDT  244 (364)
Q Consensus       168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~~~~i~g~~D~vid~  244 (364)
                      ...++ .|++||=.| +| .|.+++.+++ .|+ +|+++..++.. +.+++.-.+ .++..+-    ..+.+++|+||-.
T Consensus        43 ~~~dl-~Gk~VLDlG-cG-tG~l~i~a~~-~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~----~~l~~~fD~Vi~N  114 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAG-TG-NGILACGSYL-LGAESVTAFDIDPDAIETAKRNCGGVNFMVADV----SEISGKYDTWIMN  114 (197)
T ss_dssp             HHTSS-BTSEEEEET-CT-TCHHHHHHHH-TTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG----GGCCCCEEEEEEC
T ss_pred             HcCCC-CCCEEEEeC-CC-CcHHHHHHHH-cCCCcccccccCHHHHHHHHHccccccEEEEeh----hhcCCcceEEEeC
Confidence            45565 589999888 44 3666555444 565 79999766654 656554332 2333322    1233569999865


Q ss_pred             C
Q 017901          245 I  245 (364)
Q Consensus       245 ~  245 (364)
                      -
T Consensus       115 P  115 (197)
T d1ne2a_         115 P  115 (197)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.47  E-value=1.3  Score=36.63  Aligned_cols=37  Identities=19%  Similarity=0.346  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (364)
Q Consensus       173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~  210 (364)
                      ++..+|+|.| +|..|+.++..+...|.+|..+-.+++
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~r   39 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARDR   39 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            4556799999 899999999999999999998865554

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.29  E-value=1.5  Score=33.69  Aligned_cols=33  Identities=21%  Similarity=0.157  Sum_probs=26.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI  211 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~  211 (364)
                      +|.|.| .|-+|+.++.++ +.|.+|+++..++++
T Consensus         2 kI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~   34 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSK   34 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHH
T ss_pred             EEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHH
Confidence            578888 999999887655 579999999776655

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.19  E-value=0.97  Score=34.37  Aligned_cols=91  Identities=18%  Similarity=0.208  Sum_probs=54.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCeEEEeeC--Ccc-H-HHHHHc-----CC-c-eeeeCCChhHHHHhcCCccEEEEC
Q 017901          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCG--SKS-I-DRVLAA-----GA-E-QAVDYSSKDIELAIKGKFDAVLDT  244 (364)
Q Consensus       177 ~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~--~~~-~-~~~~~~-----g~-~-~v~~~~~~~~~~~i~g~~D~vid~  244 (364)
                      +|.|.||+|-+|+-.++++..+ ..++..+..  +++ . +.....     +. + ......+.  .....+ +|++|-|
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~dvvf~a   79 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV--RDFSAD-VDVVFLA   79 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG--GGTCTT-CCEEEEC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh--hhhhcc-cceeecc
Confidence            5899999999999999999988 456655532  111 1 111111     11 1 01111111  111113 9999999


Q ss_pred             CCCchhHHHHHhhccCCCEEEEEccC
Q 017901          245 IGAPETERLGLNFLKRGGHYMTLHGE  270 (364)
Q Consensus       245 ~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (364)
                      .+...........+..+-+++..+..
T Consensus        80 lp~~~s~~~~~~~~~~~~~vIDlSad  105 (179)
T d2g17a1          80 TAHEVSHDLAPQFLQAGCVVFDLSGA  105 (179)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred             ccchhHHHHhhhhhhcCceeeccccc
Confidence            99885556666667777788887753