Citrus Sinensis ID: 017903

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360----
Protein Sequence
MRLLQFAFLLALASGFAAILIYITGVSNLYYNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGWEINSASL
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccHHccccccccccccccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHccccccccHHHHHccccccccccEEEcccccccccccccHHHHHHHHHcccccccccccccccEEEEcccccccccccccccccccEEEEEccccccccccccccccEEEEEcccccccccccccccccccEEEEEEcccHHHHHHHHcccccccccEEEEccccccccccHHHHHHHHHHHcccEEEEEEEEEcccccccccccccccccccccccccHHHHHHHHcccHHHccccccccccEEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccEEcccEEccEEEEEcccccccccccccccccccccccccccHHHHHHHHcccccccccHHHccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccccEEEEEEEccccccccccccccccccEEEEEccccccccHHHccccccEEEEcHHHHHHccccEEEEEccccHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHccccccHHHHHHHHHHHHHccEEEEEEccccccccccEEEcccccccccHHHHHHHHHHHHccEEEEEccccccccccEEEEccccccc
Coil and Loop (DISEMBL)
MRLLQFAFLLALASGFAAILIYITGVSNlyynrisdeDYEALESLQNAFRKCVSanglgleavsgedycqvkinfpkdtvpkwrdpntgeleslsfDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKlslvlpetppysprqfgrcavignsgdllktrfgkeidgydvvirengapiqnytdyvgkkstfrllnrgsakaLDKVVELDETRKEVLIVKTTIHDIMSKMIQeipiknpvYLMLGAAfgsaakgtGLKALEFALSICdsvdmygftvdpgyKEWTRYFSesrkghtplhgrAYYHMMECLGVslevlspselqsslilgweinsasl
Flexible Loop (DISEMBL)
MRLLQFAFLLALASGFAAILIYITGVSNLYYNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKInfpkdtvpkwrDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTfrllnrgsakaldkvveldetrkevliVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELqsslilgweinsasl
Low Complexity Region (SEG)
MRllqfafllalasgfaailIYITGVSNLYYNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGWEINSASL
Disordered region (IsUnstruct)
**LLQFAFLLALASGFAAILIYITGVSNLYYNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGWEI*****
Disordered Region (DISOPRED)
*RLLQFAFLLALASGFAAILIYITG*******************LQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGV*********LCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGWEINSA**
Disordered Region (DISEMBL)
MRLLQFAFLLALASGFAAILIYITGVSNLYYNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGWEINSASL
Disordered Region (DISPRO)
*RLLQFAFLLALASGFAAILIYITGVSNLYYNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGWEINSA**
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRLLQFAFLLALASGFAAILIYITGVSNLYYNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGWEINSASL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	364	2.2.26 [Sep-21-2011]
Q16842	350	CMP-N-acetylneuraminate-b	yes	no	0.560	0.582	0.275	2e-16
Q6KB58	350	CMP-N-acetylneuraminate-b	yes	no	0.560	0.582	0.275	5e-16
Q11204	350	CMP-N-acetylneuraminate-b	yes	no	0.483	0.502	0.290	2e-15
Q11205	350	CMP-N-acetylneuraminate-b	yes	no	0.483	0.502	0.290	2e-15
Q02745	343	CMP-N-acetylneuraminate-b	yes	no	0.390	0.413	0.314	9e-13
Q6KB59	340	CMP-N-acetylneuraminate-b	no	no	0.423	0.452	0.289	4e-12
Q11200	342	CMP-N-acetylneuraminate-b	no	no	0.390	0.415	0.290	5e-12
Q11201	340	CMP-N-acetylneuraminate-b	no	no	0.398	0.426	0.278	2e-11
P54751	337	CMP-N-acetylneuraminate-b	no	no	0.376	0.406	0.317	2e-10
Q6ZXC9	359	CMP-N-acetylneuraminate-p	no	no	0.192	0.194	0.471	4e-10

>sp|Q16842|SIA4B_HUMAN CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 2 OS=Homo sapiens GN=ST3GAL2 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 32/236 (13%)

Query: 112 NSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPY---SP 168
           N + + T+E +D  P+   +  W  +       +  N    +EKL  ++P   PY    P
Sbjct: 92  NISPVWTRENMDLPPD--VQRWWMMLQPQF---KSHNTNEVLEKLFQIVPGENPYRFRDP 146

Query: 169 RQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAK 228
            Q  RCAV+GNSG+L  + +G+++DG++ ++R N AP   +   VG ++T   +   SAK
Sbjct: 147 HQCRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAK 206

Query: 229 ALD----------KVVEL-----DETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGA 273
            L           KV++L       +  ++      +   +    +++ I NP +     
Sbjct: 207 NLPANVSFVLVPFKVLDLLWIASALSTGQIRFTYAPVKSFLRVDKEKVQIYNPAFFKYIH 266

Query: 274 AFGSAAKG----TGLKALEFALSICDSVDMYGFTVDP-----GYKEWTRYFSESRK 320
              +   G    TG+  L FAL +CD V++YGF  D       Y E  RY  E RK
Sbjct: 267 DRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGFGADSRGNWHHYWENNRYAGEFRK 322

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found in terminal carbohydrate groups of certain glycoproteins, oligosaccharides and glycolipids. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 4

>sp|Q6KB58|SIA4B_PANTR CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 2 OS=Pan troglodytes GN=ST3GAL2 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 32/236 (13%)

Query: 112 NSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPY---SP 168
           N + + T+E +D  P+   +  W  +       +  N    +EKL  ++P   PY    P
Sbjct: 92  NISPVWTRENMDLPPD--VQRWWMMLQPQF---KSHNTNEVLEKLFQIVPGENPYRFRDP 146

Query: 169 RQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAK 228
            Q  RCAV+GNSG+L  + +G+++DG++ ++R N AP   +   VG ++T   +   SAK
Sbjct: 147 HQCRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAK 206

Query: 229 ALDKVVE--------LDE-------TRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGA 273
            L   V         LD        +  ++      +   +    +++ I NP +     
Sbjct: 207 NLPANVSFVLVPFKALDLLWIASALSTGQIRFTYAPVKSFLRVDKEKVQIYNPAFFKYIH 266

Query: 274 AFGSAAKG----TGLKALEFALSICDSVDMYGFTVDP-----GYKEWTRYFSESRK 320
              +   G    TG+  L FAL +CD V++YGF  D       Y E  RY  E RK
Sbjct: 267 DRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGFGADSRGNWHHYWENNRYAGEFRK 322

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found in terminal carbohydrate groups of certain glycoproteins, oligosaccharides and glycolipids. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

>sp|Q11204|SIA4B_MOUSE CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 2 OS=Mus musculus GN=St3gal2 PE=2 SV=2

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 27/203 (13%)

Query: 145 RCQNKTLCMEKLSLVLPETPPY---SPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRE 201
           +  N    +EKL  ++P   PY    P+Q  RCAV+GNSG+L  + +G+E+D ++ ++R 
Sbjct: 120 KSHNTNEVLEKLFQIVPGENPYRFRDPQQCRRCAVVGNSGNLRGSGYGQEVDSHNFIMRM 179

Query: 202 NGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVE--------LDE-------TRKEVLIV 246
           N AP   +   VG ++T   +   SAK L   V         LD        +  ++   
Sbjct: 180 NQAPTVGFEKDVGSRTTHHFMYPESAKNLPANVSFVLVPFKALDLMWIASALSTGQIRFT 239

Query: 247 KTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKG----TGLKALEFALSICDSVDMYGF 302
              +   +    +++ I NP +        +   G    TG+  L FAL +CD V++YGF
Sbjct: 240 YAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGF 299

Query: 303 TVDP-----GYKEWTRYFSESRK 320
             D       Y E  RY  E RK
Sbjct: 300 GADSRGNWHHYWENNRYAGEFRK 322

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found in terminal carbohydrate groups of certain glycoproteins, oligosaccharides and glycolipids. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

>sp|Q11205|SIA4B_RAT CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 2 OS=Rattus norvegicus GN=St3gal2 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 27/203 (13%)

Query: 145 RCQNKTLCMEKLSLVLPETPPY---SPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRE 201
           +  N    +EKL  ++P   PY    P+Q  RCAV+GNSG+L  + +G+E+D ++ ++R 
Sbjct: 120 KSHNTNEVLEKLFQIVPGENPYRFRDPQQCRRCAVVGNSGNLRGSGYGQEVDSHNFIMRM 179

Query: 202 NGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVE--------LDE-------TRKEVLIV 246
           N AP   +   VG ++T   +   SAK L   V         LD        +  ++   
Sbjct: 180 NQAPTVGFEKDVGSRTTHHFMYPESAKNLPANVSFVLVPFKALDLMWIASALSTGQIRFT 239

Query: 247 KTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKG----TGLKALEFALSICDSVDMYGF 302
              +   +    +++ I NP +        +   G    TG+  L FAL +CD V++YGF
Sbjct: 240 YAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGF 299

Query: 303 TVDP-----GYKEWTRYFSESRK 320
             D       Y E  RY  E RK
Sbjct: 300 GADSRGNWHHYWENNRYAGEFRK 322

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found in terminal carbohydrate groups of certain glycoproteins, oligosaccharides and glycolipids. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

>sp|Q02745|SIA4A_PIG CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 1 OS=Sus scrofa GN=ST3GAL1 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)

Query: 173 RCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDK 232
           RCAV+GNSG+L ++ +G +ID +D V+R N AP + +   VG K+T   +   S + L +
Sbjct: 144 RCAVVGNSGNLKESYYGPQIDSHDFVLRMNKAPTEGFEADVGSKTTHHFVYPESFRELAQ 203

Query: 233 -----VVELDETRKEVLIVKTTIHDIMSKMI---QEIPIKNPVYLMLGAAF--------- 275
                +V    T  E +I  TT   I    +    +I +K    L+   AF         
Sbjct: 204 EVSMILVPFKTTDLEWVISATTTGRISHTYVPVPAKIKVKKEKILIYHPAFIKYVFDRWL 263

Query: 276 --GSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYF 315
                   TG+ ++ F+L ICD VD+YGF  D     W  Y+
Sbjct: 264 QGHGRYPSTGILSVIFSLHICDEVDLYGFGAD-SKGNWHHYW 304

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found on sugar chains O-linked to Thr or Ser and also as a terminal sequence on certain gangliosides. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values. The short isoform seems to be catalytically inactive.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

>sp|Q6KB59|SIA4A_PANTR CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 1 OS=Pan troglodytes GN=ST3GAL1 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 22/176 (12%)

Query: 164 PPYSPRQFG--RCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRL 221
           P    R  G  RCAV+GNSG+L ++ +G EID +D V+R N AP   +   VG K+T  L
Sbjct: 130 PMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDFVLRMNKAPTAGFEADVGTKTTHHL 189

Query: 222 LNRGSAKALDKVVELDETRKEVL--------IVKTTIHDIMSKMIQEIPIKNPVYLMLGA 273
           +   S + L   V +     + +        I   TI    + ++ +I +K    L+   
Sbjct: 190 VYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGTISHTYTPVLVKIRVKQDKILIYHP 249

Query: 274 AF-----------GSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSES 318
           AF                 TG+ ++ F++ +CD VD+YGF  D     W  Y+  +
Sbjct: 250 AFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVDLYGFGAD-SKGNWHHYWENN 304

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found on sugar chains O-linked to Thr or Ser and also as a terminal sequence on certain gangliosides. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

>sp|Q11200|SIA4A_CHICK CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 1 OS=Gallus gallus GN=ST3GAL1 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 20/162 (12%)

Query: 173 RCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDK 232
           RCAV+GNSG+L ++++G++ID +D V+R N AP   Y   VG K+T   +   S K L +
Sbjct: 143 RCAVVGNSGNLRQSQYGQDIDSHDFVLRMNRAPTIGYESDVGSKTTHHFVYPESYKELAE 202

Query: 233 VVELDETRKEVLIVKTTIHDIMSKMI--------QEIPIKNPVYLMLGAAF--------- 275
            V +     + L ++  +  + +  I        ++I ++    L+   +F         
Sbjct: 203 NVSMIVIPFKTLDLRWIVTALTTGTINFTYVPVPRKIKVRKEKVLIYNPSFIKYVYENWL 262

Query: 276 --GSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYF 315
                   TGL ++ FAL +CD V++YGF  D     W  Y+
Sbjct: 263 QNHGRYPSTGLLSVIFALHVCDEVNVYGFGAD-SKGHWHHYW 303

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found on sugar chains O-linked to Thr or Ser and also as a terminal sequence on certain gangliosides. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

>sp|Q11201|SIA4A_HUMAN CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 1 OS=Homo sapiens GN=ST3GAL1 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)

Query: 173 RCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDK 232
           RCAV+GNSG+L ++ +G EID +D V+R N AP   +   VG K+T  L+   S + L  
Sbjct: 141 RCAVVGNSGNLRESSYGPEIDSHDFVLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGD 200

Query: 233 VVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYL-------------MLGAAFGSAA 279
            V +     + + ++  +  I +  I    I  P  +              +   F +  
Sbjct: 201 NVSMILVPFKTIDLEWVVSAITTGTISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWL 260

Query: 280 KG------TGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSES 318
           +G      TG+ ++ F++ +CD VD+YGF  D     W  Y+  +
Sbjct: 261 QGHGRYPSTGILSVIFSMHVCDEVDLYGFGAD-SKGNWHHYWENN 304

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found on sugar chains O-linked to Thr or Ser and also as a terminal sequence on certain gangliosides. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

>sp|P54751|SIA4A_MOUSE CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 1 OS=Mus musculus GN=St3gal1 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 36/173 (20%)

Query: 173 RCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDK 232
           RCAV+GNSG+L  + +G EID +D V+R N AP   +   VG ++T  L+   S +    
Sbjct: 138 RCAVVGNSGNLKDSSYGPEIDSHDFVLRMNKAPTVGFEADVGSRTTHHLVYPESFR---- 193

Query: 233 VVELDETRKEVLI-VKTT-IHDIMS------------------KMIQE-IPIKNPVYLML 271
             EL E    VL+  KTT +  ++S                  K+ QE I I +P ++  
Sbjct: 194 --ELGENVNMVLVPFKTTDLQWVISATTTGTITHTYVPVPPKIKVKQEKILIYHPAFIKY 251

Query: 272 GAAFGSAAKG------TGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSES 318
              F +  +G      TG+ ++ F++ ICD VD+YGF  D     W  Y+  +
Sbjct: 252 --VFDNWLQGHGRYPSTGILSIIFSIHICDEVDLYGFGAD-SKGNWHHYWENN 301

It may be responsible for the synthesis of the sequence NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- found on sugar chains O-linked to Thr or Ser and also as a terminal sequence on certain gangliosides. SIAT4A and SIAT4B sialylate the same acceptor substrates but exhibit different Km values.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

>sp|Q6ZXC9|SIA8D_BOVIN CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase OS=Bos taurus GN=ST8SIA4 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 43/70 (61%)

Query: 154 EKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYV 213
           + L  +LPE  P   R+F  CAV+GNSG LL +  GKEID ++ VIR N AP+  +   V
Sbjct: 122 QDLHSLLPEVSPMKNRRFKTCAVVGNSGILLDSECGKEIDSHNFVIRCNLAPVVEFAADV 181

Query: 214 GKKSTFRLLN 223
           G KS F  +N
Sbjct: 182 GTKSDFITMN 191

Catalyzes the polycondensation of alpha-2,8-linked sialic acid required for the synthesis of polysialic acid (PSA), which is present on the embryonic neural cell adhesion molecule (N-CAM), necessary for plasticity of neural cells.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
225456455	439	PREDICTED: uncharacterized protein LOC10	0.978	0.810	0.810	1e-174
255540093	442	alpha-2,8-sialyltransferase 8b, putative	0.997	0.821	0.791	1e-174
351727457	442	sialyltransferase-like [Glycine max] gi|	0.978	0.805	0.794	1e-173
255639019	442	unknown [Glycine max]	0.978	0.805	0.791	1e-172
224136298	441	predicted protein [Populus trichocarpa]	0.947	0.782	0.821	1e-172
225456457	430	PREDICTED: uncharacterized protein LOC10	0.956	0.809	0.801	1e-171
449465419	440	PREDICTED: uncharacterized protein LOC10	0.942	0.779	0.814	1e-170
30693090	440	glycosyltransferase family 29 (sialyltra	0.942	0.779	0.797	1e-168
83318896	442	sialyltransferase-like protein [Lotus ja	0.978	0.805	0.8	1e-167
297819500	440	glycosyl transferase family 29 protein [	0.942	0.779	0.794	1e-167

>gi|225456455|ref|XP_002284431.1| PREDICTED: uncharacterized protein LOC100243999 isoform 1 [Vitis vinifera] gi|297734490|emb|CBI15737.3| unnamed protein product [Vitis vinifera]

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 290/358 (81%), Positives = 321/358 (89%), Gaps = 2/358 (0%)

Query: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYNRI-SDEDYEALESLQNAFRKCVSANGLG 59
           MRLLQF  +LALASGFAAI+IYI G++N+Y   + SDED  ALESLQ+ F+KCVS+NGLG
Sbjct: 1   MRLLQFGLILALASGFAAIIIYINGLANIYEKSLLSDEDLGALESLQSGFQKCVSSNGLG 60

Query: 60  LEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTK 119
           L+A  G DYCQV I FP DTVPKW+DP TGELE LSFDFNLCEAVA WE+VRNSTTILTK
Sbjct: 61  LQAARGRDYCQVTIKFPSDTVPKWKDPKTGELEGLSFDFNLCEAVATWEQVRNSTTILTK 120

Query: 120 EYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGN 179
           E+IDALPNGW +YAWRRINKG+LLN C+NKTLCMEKLSLVLPETPPY PRQF RCAVIGN
Sbjct: 121 EFIDALPNGWTDYAWRRINKGILLNNCKNKTLCMEKLSLVLPETPPYFPRQFDRCAVIGN 180

Query: 180 SGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDET 239
           SGDLLKTRFGKEIDGYD VIRENGAPI+NYT YVGKKSTFRLLNRGSAKALDKVVELDET
Sbjct: 181 SGDLLKTRFGKEIDGYDAVIRENGAPIENYTAYVGKKSTFRLLNRGSAKALDKVVELDET 240

Query: 240 RKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDM 299
           RKE LI+KTT+HDIM+KMIQE+PI NPVYLMLGA+FGSAAKGTGLKALEFALSIC+SVDM
Sbjct: 241 RKEALIIKTTVHDIMNKMIQEVPIHNPVYLMLGASFGSAAKGTGLKALEFALSICESVDM 300

Query: 300 YGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
           YGFTVDPGYKEWTRYFSESR+GHTPLHGRAYY MMECLG+ +++ SP     + I+ +
Sbjct: 301 YGFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSPMRADPNRIVTY 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540093|ref|XP_002511111.1| alpha-2,8-sialyltransferase 8b, putative [Ricinus communis] gi|223550226|gb|EEF51713.1| alpha-2,8-sialyltransferase 8b, putative [Ricinus communis]

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 289/365 (79%), Positives = 329/365 (90%), Gaps = 2/365 (0%)

Query: 1   MRLLQFAFLLALASGFAAILIYITGVSNL-YYNRISDEDYEALESLQNAFRKCVSANGLG 59
           MRLLQF F++ALASG +AILIYITGVSNL   +++S ED +ALESLQ++F+KCV ANGLG
Sbjct: 1   MRLLQFGFVVALASGLSAILIYITGVSNLNSIHKLSHEDVKALESLQSSFQKCVRANGLG 60

Query: 60  LEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTK 119
           L+AV G DYCQV INFP DTVP+W+DP TGELE LSF+FNLCEAVA WE+VRNSTTILT+
Sbjct: 61  LQAVPGSDYCQVTINFPSDTVPRWKDPKTGELEGLSFEFNLCEAVATWEQVRNSTTILTR 120

Query: 120 EYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGN 179
           E+IDALPNGW +YAWRRINKG+LLN C+NKTLC+EKLSLVLPETPPY PRQF RCAVIGN
Sbjct: 121 EFIDALPNGWVDYAWRRINKGILLNNCKNKTLCLEKLSLVLPETPPYFPRQFDRCAVIGN 180

Query: 180 SGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDET 239
           SGDLLKTRFGKEIDGYD V+RENGAPIQNYT+Y GKKSTFRLLNRGSAKALDKVVELDET
Sbjct: 181 SGDLLKTRFGKEIDGYDAVVRENGAPIQNYTEYAGKKSTFRLLNRGSAKALDKVVELDET 240

Query: 240 RKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDM 299
           RKE LI+KTTIHDIM+KMI+E+PI NPV+LMLGA+FGSAAKGTGLKALEFALSICDSVDM
Sbjct: 241 RKEALIIKTTIHDIMNKMIREVPINNPVHLMLGASFGSAAKGTGLKALEFALSICDSVDM 300

Query: 300 YGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGWEI 359
           YGFTVDPGYKEWTRYFSESR+GHTPLHGRAYY MMECLG+ +++ SP     + ++ W  
Sbjct: 301 YGFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSPMRDDPNRVVQWVP 359

Query: 360 NSASL 364
           N +++
Sbjct: 360 NWSTI 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727457|ref|NP_001238441.1| sialyltransferase-like [Glycine max] gi|70663490|emb|CAJ15144.1| sialyltransferase-like [Glycine max]

 Score =  612 bits (1578), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 286/360 (79%), Positives = 321/360 (89%), Gaps = 4/360 (1%)

Query: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYN---RISDEDYEALESLQNAFRKCVSANG 57
           MR+LQ    LALASGFAAI IYITG+S+ +      ++DED +AL SL + F+KCVSANG
Sbjct: 1   MRILQLGLFLALASGFAAISIYITGLSDPFVYPSYHLTDEDTQALLSLHDTFQKCVSANG 60

Query: 58  LGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTIL 117
           LGL+A  G DYCQ  INFP DT+PKW+DP TGELE+LSFDFNLCEAVA WE+VRNSTTIL
Sbjct: 61  LGLKATRGTDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWEQVRNSTTIL 120

Query: 118 TKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVI 177
           TKE+ID+LPNGWEEYAWRRINKG+ LNRC+NKTLCMEKLSLVLPETPPY PRQFGRCAVI
Sbjct: 121 TKEFIDSLPNGWEEYAWRRINKGIQLNRCENKTLCMEKLSLVLPETPPYFPRQFGRCAVI 180

Query: 178 GNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELD 237
           GNSGDLLKT+FG EIDGY+VVIRENGAP QNYTDYVG+KSTFRLLNRGSAKALDKVVELD
Sbjct: 181 GNSGDLLKTKFGNEIDGYEVVIRENGAPTQNYTDYVGRKSTFRLLNRGSAKALDKVVELD 240

Query: 238 ETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSV 297
           E RKEVLI+KTTIHDIM+KMI+E+PIKNPVYLMLGA+FGSAAKGTGLKALEFALS+CDSV
Sbjct: 241 EQRKEVLIIKTTIHDIMNKMIREVPIKNPVYLMLGASFGSAAKGTGLKALEFALSMCDSV 300

Query: 298 DMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
           DMYGFTVDPGYKEWTRYFSESR+GHTPLHGRAYY MMECLG+ +++ SP     + ++ W
Sbjct: 301 DMYGFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSPMRADLNRVVKW 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255639019|gb|ACU19810.1| unknown [Glycine max]

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 285/360 (79%), Positives = 320/360 (88%), Gaps = 4/360 (1%)

Query: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYN---RISDEDYEALESLQNAFRKCVSANG 57
           MR+LQ    LALASGFAAI IYITG+S+ +      ++DED +AL SL + F+KCVSANG
Sbjct: 1   MRILQLGLFLALASGFAAISIYITGLSDPFVYPSYHLTDEDTQALLSLHDTFQKCVSANG 60

Query: 58  LGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTIL 117
           LGL+A  G DYCQ  INFP DT+PKW+DP TGELE+LSFDFNLCEAVA WE+VRNSTTIL
Sbjct: 61  LGLKATRGTDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWEQVRNSTTIL 120

Query: 118 TKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVI 177
           TKE+ID+LPNGWEEYAWRRINKG+ LNRC+NKTLCMEKLSLVLPETPPY PRQFGRCAVI
Sbjct: 121 TKEFIDSLPNGWEEYAWRRINKGIQLNRCENKTLCMEKLSLVLPETPPYFPRQFGRCAVI 180

Query: 178 GNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELD 237
           GNSGDLLKT+FG EIDGY+VVIRENGAP QNYTDYVG+KSTFRLLNRGSAKALDKVVELD
Sbjct: 181 GNSGDLLKTKFGNEIDGYEVVIRENGAPTQNYTDYVGRKSTFRLLNRGSAKALDKVVELD 240

Query: 238 ETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSV 297
           E RK VLI+KTTIHDIM+KMI+E+PIKNPVYLMLGA+FGSAAKGTGLKALEFALS+CDSV
Sbjct: 241 EQRKGVLIIKTTIHDIMNKMIREVPIKNPVYLMLGASFGSAAKGTGLKALEFALSMCDSV 300

Query: 298 DMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
           DMYGFTVDPGYKEWTRYFSESR+GHTPLHGRAYY MMECLG+ +++ SP     + ++ W
Sbjct: 301 DMYGFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSPMRADLNRVVKW 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136298|ref|XP_002322294.1| predicted protein [Populus trichocarpa] gi|222869290|gb|EEF06421.1| predicted protein [Populus trichocarpa]

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 286/348 (82%), Positives = 322/348 (92%), Gaps = 3/348 (0%)

Query: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYY-NRISDEDYEALESLQNAFRKCVSANGLG 59
           MRLLQ  F LALASG +A+LIYITGVS+L+  N +S++D EAL+SLQN F+KCVS NGLG
Sbjct: 1   MRLLQLGFFLALASGLSALLIYITGVSDLHVSNSLSNQDLEALQSLQNGFKKCVSVNGLG 60

Query: 60  LEAVS-GEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILT 118
           L+AV+ G DYC+V INFP DTVPKW+DP TGELE L F+FNLCEAVA WE+VRNSTTILT
Sbjct: 61  LQAVTTGSDYCKVTINFPSDTVPKWKDPKTGELEGLWFEFNLCEAVATWEQVRNSTTILT 120

Query: 119 KEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIG 178
            E+IDALPNGWE+YAWRRINKGVLLN+C+NKTLC+EKLSLVLPETPPY PRQF RCAVIG
Sbjct: 121 SEFIDALPNGWEDYAWRRINKGVLLNQCKNKTLCLEKLSLVLPETPPYVPRQFDRCAVIG 180

Query: 179 NSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDE 238
           NSGDLLKT+FGKEID YDVVIRENGAPI+NYT+YVGKKS+FRLLNRGSAKALDKVVELDE
Sbjct: 181 NSGDLLKTKFGKEIDDYDVVIRENGAPIKNYTEYVGKKSSFRLLNRGSAKALDKVVELDE 240

Query: 239 TRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVD 298
           TRKEVL++KTTIHDIM+KMI+E+PI NPVYLMLGA+FGSAAKGTGLKALEFALSIC+SVD
Sbjct: 241 TRKEVLMIKTTIHDIMNKMIREVPINNPVYLMLGASFGSAAKGTGLKALEFALSICESVD 300

Query: 299 MYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSP 346
           MYGFTVDPGYKEWTRYFSESR+GHTPLHGRAYY MMECLG+ +++ SP
Sbjct: 301 MYGFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSP 347

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456457|ref|XP_002284437.1| PREDICTED: uncharacterized protein LOC100243999 isoform 2 [Vitis vinifera]

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 286/357 (80%), Positives = 316/357 (88%), Gaps = 9/357 (2%)

Query: 1   MRLLQFAFLLALASGFAAILIYITGVSNLYYNRISDEDYEALESLQNAFRKCVSANGLGL 60
           MRLLQF  +LALASGFAAI+IYI G++N+Y          ALESLQ+ F+KCVS+NGLGL
Sbjct: 1   MRLLQFGLILALASGFAAIIIYINGLANIYLG--------ALESLQSGFQKCVSSNGLGL 52

Query: 61  EAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKE 120
           +A  G DYCQV I FP DTVPKW+DP TGELE LSFDFNLCEAVA WE+VRNSTTILTKE
Sbjct: 53  QAARGRDYCQVTIKFPSDTVPKWKDPKTGELEGLSFDFNLCEAVATWEQVRNSTTILTKE 112

Query: 121 YIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNS 180
           +IDALPNGW +YAWRRINKG+LLN C+NKTLCMEKLSLVLPETPPY PRQF RCAVIGNS
Sbjct: 113 FIDALPNGWTDYAWRRINKGILLNNCKNKTLCMEKLSLVLPETPPYFPRQFDRCAVIGNS 172

Query: 181 GDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETR 240
           GDLLKTRFGKEIDGYD VIRENGAPI+NYT YVGKKSTFRLLNRGSAKALDKVVELDETR
Sbjct: 173 GDLLKTRFGKEIDGYDAVIRENGAPIENYTAYVGKKSTFRLLNRGSAKALDKVVELDETR 232

Query: 241 KEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMY 300
           KE LI+KTT+HDIM+KMIQE+PI NPVYLMLGA+FGSAAKGTGLKALEFALSIC+SVDMY
Sbjct: 233 KEALIIKTTVHDIMNKMIQEVPIHNPVYLMLGASFGSAAKGTGLKALEFALSICESVDMY 292

Query: 301 GFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
           GFTVDPGYKEWTRYFSESR+GHTPLHGRAYY MMECLG+ +++ SP     + I+ +
Sbjct: 293 GFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSPMRADPNRIVTY 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465419|ref|XP_004150425.1| PREDICTED: uncharacterized protein LOC101221492 [Cucumis sativus] gi|449516916|ref|XP_004165492.1| PREDICTED: uncharacterized protein LOC101226314 [Cucumis sativus]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 281/345 (81%), Positives = 317/345 (91%), Gaps = 2/345 (0%)

Query: 14  SGFAAILIYITGVSNLYYN-RISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVK 72
           SGF AILIYI GVSNLY N ++SDED+EAL+SLQ  F+KCVSANGLGL+A  G+DYC V 
Sbjct: 14  SGFTAILIYINGVSNLYGNYQLSDEDFEALQSLQGNFQKCVSANGLGLQAEGGDDYCLVT 73

Query: 73  INFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEY 132
           + FP+DT+PKW+DP TG+LE LS++FNLCEAVA WE+VRNSTTILT+EYID LPNGWEEY
Sbjct: 74  MRFPQDTIPKWKDPKTGDLEGLSYEFNLCEAVAIWEQVRNSTTILTREYIDGLPNGWEEY 133

Query: 133 AWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEI 192
           AWRRINKGVLLNRC NKTLCMEKLSLVLPETPPY P+Q+GRCAV+GNSGDLLKT+FG+EI
Sbjct: 134 AWRRINKGVLLNRCVNKTLCMEKLSLVLPETPPYVPKQYGRCAVVGNSGDLLKTKFGEEI 193

Query: 193 DGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHD 252
           DG+DVVIRENGAPIQNYTD+VGKKSTFRLLNRGSAKALDKVVELDETR+EVL+VKTTIHD
Sbjct: 194 DGFDVVIRENGAPIQNYTDHVGKKSTFRLLNRGSAKALDKVVELDETRREVLLVKTTIHD 253

Query: 253 IMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWT 312
           IM+KMI+E+PIKNPVYLMLGA+FGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWT
Sbjct: 254 IMNKMIKEVPIKNPVYLMLGASFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWT 313

Query: 313 RYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
           RYFSESR+GHTPLHGRAYY MMECLG+ +++ SP       ++ W
Sbjct: 314 RYFSESRQGHTPLHGRAYYQMMECLGL-VKIHSPMRPNPRRVVKW 357

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30693090|ref|NP_190451.2| glycosyltransferase family 29 (sialyltransferase) protein [Arabidopsis thaliana] gi|19347711|gb|AAL85966.1| unknown protein [Arabidopsis thaliana] gi|22136812|gb|AAM91750.1| unknown protein [Arabidopsis thaliana] gi|332644938|gb|AEE78459.1| glycosyltransferase family 29 (sialyltransferase) protein [Arabidopsis thaliana]

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 275/345 (79%), Positives = 314/345 (91%), Gaps = 2/345 (0%)

Query: 14  SGFAAILIYITGVSNLY-YNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVK 72
           +G +A+LIYI GVSNLY  NR ++ED EAL+SLQN F+KCVSANGLGL+A  G DYC+V 
Sbjct: 14  TGISAVLIYIIGVSNLYESNRFTNEDLEALQSLQNGFQKCVSANGLGLQAAMGRDYCKVS 73

Query: 73  INFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEY 132
           INFPKDTVPKW+DP +GELE LS++F+LCEAVA WE+VRNS+TILTKEYIDALPNGWE+Y
Sbjct: 74  INFPKDTVPKWKDPKSGELEGLSYEFDLCEAVATWEQVRNSSTILTKEYIDALPNGWEDY 133

Query: 133 AWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEI 192
           AWRRINKG+ LNRCQNK+LC+EKLSLVLPETPPY PRQFGRCAVIGNSGDLLKT+FGKEI
Sbjct: 134 AWRRINKGIQLNRCQNKSLCIEKLSLVLPETPPYFPRQFGRCAVIGNSGDLLKTKFGKEI 193

Query: 193 DGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHD 252
           D YD V+RENGAPIQNY +YVG+KSTFRLLNRGSAKALDKVVELDE ++EVL+VKTTIHD
Sbjct: 194 DTYDTVLRENGAPIQNYKEYVGEKSTFRLLNRGSAKALDKVVELDEKKQEVLLVKTTIHD 253

Query: 253 IMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWT 312
           IM+KMI+E+PIKNPVYLMLGA+FGSAAKGTGLKALEFALS CDSVDMYGFTVDPGYKEWT
Sbjct: 254 IMNKMIREVPIKNPVYLMLGASFGSAAKGTGLKALEFALSTCDSVDMYGFTVDPGYKEWT 313

Query: 313 RYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
           RYFSESR+GHTPLHGRAYY MMECLG+ +++ SP     + ++ W
Sbjct: 314 RYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSPMRADPNRVVKW 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|83318896|emb|CAJ15148.2| sialyltransferase-like protein [Lotus japonicus]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/360 (80%), Positives = 322/360 (89%), Gaps = 4/360 (1%)

Query: 1   MRLLQFAFLLALASGFAAILIYITGVSN--LYYN-RISDEDYEALESLQNAFRKCVSANG 57
           MR+LQ   LLALASGFAAI IYI G+S+  +Y    ++DED +AL SL N F+KCVSANG
Sbjct: 1   MRVLQLGLLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANG 60

Query: 58  LGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTIL 117
           LGL+A    DYCQ  INFP DT+PKW +P TGELE+LSFDFNLCEAVA WE+VRNSTTIL
Sbjct: 61  LGLKAAMSSDYCQTTINFPSDTIPKWVNPKTGELEALSFDFNLCEAVATWEQVRNSTTIL 120

Query: 118 TKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVI 177
           TKE+ID+LPNGWEEYAWRRINKG LLNRC+N+TLCMEKLSLVLP+TPPY P+QFGRCAVI
Sbjct: 121 TKEFIDSLPNGWEEYAWRRINKGALLNRCENRTLCMEKLSLVLPDTPPYFPKQFGRCAVI 180

Query: 178 GNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELD 237
           GNSGDLLKT+FGKEIDGYDVVIRENGAPIQNYTDYVG+KSTFRLLNRGSAKALDKVVELD
Sbjct: 181 GNSGDLLKTKFGKEIDGYDVVIRENGAPIQNYTDYVGRKSTFRLLNRGSAKALDKVVELD 240

Query: 238 ETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSV 297
           E RKEVLIVKTTIHDIM+KMI+E+PIKNPVYLMLGA+FGSAAKGTGLKALEFALS+CDSV
Sbjct: 241 ERRKEVLIVKTTIHDIMNKMIKELPIKNPVYLMLGASFGSAAKGTGLKALEFALSMCDSV 300

Query: 298 DMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
           DMYGFTVDPGYKEWTRYFSESR+GHTPLHGRAYY MMECLG+ +++ SP     + ++ W
Sbjct: 301 DMYGFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSPMRADPNRVVKW 359

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819500|ref|XP_002877633.1| glycosyl transferase family 29 protein [Arabidopsis lyrata subsp. lyrata] gi|297323471|gb|EFH53892.1| glycosyl transferase family 29 protein [Arabidopsis lyrata subsp. lyrata]

 Score =  592 bits (1526), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 274/345 (79%), Positives = 313/345 (90%), Gaps = 2/345 (0%)

Query: 14  SGFAAILIYITGVSNLY-YNRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVK 72
           +G +A+LIYI GVSNLY  NR+S+ED EAL SLQ+ F+KCVSANGLGL+A  G DYC+V 
Sbjct: 14  TGISAVLIYIIGVSNLYESNRLSNEDLEALHSLQSGFQKCVSANGLGLQAAMGRDYCKVS 73

Query: 73  INFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEY 132
           INFPKDTVPKW+DP +GELE LS++F+LCEAVA WE+VRNS+TILTKEYIDALPNGWE+Y
Sbjct: 74  INFPKDTVPKWKDPKSGELEGLSYEFDLCEAVATWEQVRNSSTILTKEYIDALPNGWEDY 133

Query: 133 AWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEI 192
           AWRRINKG+ LNRCQNK+LC+EKLSLVL ETPPY PRQFGRCAVIGNSGDLLKT+FGKEI
Sbjct: 134 AWRRINKGIQLNRCQNKSLCIEKLSLVLAETPPYFPRQFGRCAVIGNSGDLLKTKFGKEI 193

Query: 193 DGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHD 252
           D YD V+RENGAPIQNY +YVG+KSTFRLLNRGSAKALDKVVELDE ++EVL+VKTTIHD
Sbjct: 194 DTYDAVLRENGAPIQNYKEYVGEKSTFRLLNRGSAKALDKVVELDEKKQEVLLVKTTIHD 253

Query: 253 IMSKMIQEIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWT 312
           IM+KMI+E+PIKNPVYLMLGA+FGSAAKGTGLKALEFALS CDSVDMYGFTVDPGYKEWT
Sbjct: 254 IMNKMIREVPIKNPVYLMLGASFGSAAKGTGLKALEFALSTCDSVDMYGFTVDPGYKEWT 313

Query: 313 RYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
           RYFSESR+GHTPLHGRAYY MMECLG+ +++ SP     + ++ W
Sbjct: 314 RYFSESRQGHTPLHGRAYYQMMECLGL-IKIHSPMRADPNRVVKW 357

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
TAIR|locus:2099468	440	AT3G48820 [Arabidopsis thalian	0.923	0.763	0.804	8.5e-152
TAIR|locus:2025540	474	MGP2 "MALE GAMETOPHYTE DEFECTI	0.840	0.645	0.503	2.2e-82
UNIPROTKB|Q6H8M9	350	siat4B "ST3 beta-galactoside a	0.313	0.325	0.327	3e-14
UNIPROTKB|Q16842	350	ST3GAL2 "CMP-N-acetylneuramina	0.313	0.325	0.319	6.9e-14
ZFIN|ZDB-GENE-120426-1	317	st3gal1l2 "ST3 beta-galactosid	0.329	0.378	0.338	8.1e-14
UNIPROTKB|E2RR49	350	ST3GAL2 "Uncharacterized prote	0.313	0.325	0.319	1.2e-13
MGI|MGI:99427	350	St3gal2 "ST3 beta-galactoside	0.236	0.245	0.359	1.1e-12
RGD|68413	350	St3gal2 "ST3 beta-galactoside	0.236	0.245	0.359	1.1e-12
UNIPROTKB|Q11205	350	St3gal2 "CMP-N-acetylneuramina	0.236	0.245	0.359	1.1e-12
ZFIN|ZDB-GENE-060321-2	330	st3gal1l "ST3 beta-galactoside	0.244	0.269	0.358	2.4e-12

TAIR|locus:2099468 AT3G48820 [Arabidopsis thaliana (taxid:3702)]

 Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
 Identities = 272/338 (80%), Positives = 308/338 (91%)

Query:    21 IYITGVSNLYY-NRISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDT 79
             IYI GVSNLY  NR ++ED EAL+SLQN F+KCVSANGLGL+A  G DYC+V INFPKDT
Sbjct:    21 IYIIGVSNLYESNRFTNEDLEALQSLQNGFQKCVSANGLGLQAAMGRDYCKVSINFPKDT 80

Query:    80 VPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINK 139
             VPKW+DP +GELE LS++F+LCEAVA WE+VRNS+TILTKEYIDALPNGWE+YAWRRINK
Sbjct:    81 VPKWKDPKSGELEGLSYEFDLCEAVATWEQVRNSSTILTKEYIDALPNGWEDYAWRRINK 140

Query:   140 GVLLNRCQNKTLCMEKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVI 199
             G+ LNRCQNK+LC+EKLSLVLPETPPY PRQFGRCAVIGNSGDLLKT+FGKEID YD V+
Sbjct:   141 GIQLNRCQNKSLCIEKLSLVLPETPPYFPRQFGRCAVIGNSGDLLKTKFGKEIDTYDTVL 200

Query:   200 RENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQ 259
             RENGAPIQNY +YVG+KSTFRLLNRGSAKALDKVVELDE ++EVL+VKTTIHDIM+KMI+
Sbjct:   201 RENGAPIQNYKEYVGEKSTFRLLNRGSAKALDKVVELDEKKQEVLLVKTTIHDIMNKMIR 260

Query:   260 EIPIKNPVYLMLGAAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESR 319
             E+PIKNPVYLMLGA+FGSAAKGTGLKALEFALS CDSVDMYGFTVDPGYKEWTRYFSESR
Sbjct:   261 EVPIKNPVYLMLGASFGSAAKGTGLKALEFALSTCDSVDMYGFTVDPGYKEWTRYFSESR 320

Query:   320 KGHTPLHGRAYYHMMECLGVSLEVLSPSELQSSLILGW 357
             +GHTPLHGRAYY MMECLG+ +++ SP     + ++ W
Sbjct:   321 QGHTPLHGRAYYQMMECLGL-IKIHSPMRADPNRVVKW 357

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008373 "sialyltransferase activity" evidence=IEA;ISS;IDA

GO:0016020 "membrane" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2025540 MGP2 "MALE GAMETOPHYTE DEFECTIVE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 158/314 (50%), Positives = 216/314 (68%)

Query:    34 ISDEDYEALESLQNAFRKCVSANGLGLEAVSGEDYCQVKINFPKDTVPKWRDPNTGELES 93
             +  ED + L   Q++ ++CV+  GLGL A    D+C + + FP+ T   W +      E+
Sbjct:    43 LQPEDIQILSDFQSSVQQCVANRGLGLSAHI-IDHCNLILKFPEGTNSTWYNAQFKVFEA 101

Query:    94 LSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCM 153
             L F +N+CEAV  WE+ RN TT+LT+EY+D  P+GW +YA  RI + +  ++C N+TLC 
Sbjct:   102 LEFKYNVCEAVLLWEQYRNMTTVLTREYLDVRPDGWLDYAAMRIAQ-LGADKCYNRTLCE 160

Query:   154 EKLSLVLPETPPYSPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPI-QNYTDY 212
             E L+++LP  PP+ PRQF +CAV+GNSGDLLKT FG+EID +D V R+N AP+ + Y  Y
Sbjct:   161 EHLNVILPAKPPFHPRQFHKCAVVGNSGDLLKTEFGEEIDSHDAVFRDNEAPVNEKYAKY 220

Query:   213 VGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLG 272
             VG K  FRL+ RG+A+ + K+  L+ +  EVLI+K+  H   ++MI+ IP  NPVYL  G
Sbjct:   221 VGVKRDFRLVVRGAARNMIKI--LNGSDNEVLIIKSVTHRDFNEMIKRIP--NPVYLFQG 276

Query:   273 AAFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYH 332
                   AKGTG+K++E ALS+CD VD+YGFTVDPGY EWTRYFS  RKGH PL GRAYY 
Sbjct:   277 IVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSTPRKGHNPLQGRAYYQ 336

Query:   333 MMECLGVSLEVLSP 346
             ++ECLGV + + SP
Sbjct:   337 LLECLGV-IRIHSP 349

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0008373 "sialyltransferase activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0009846 "pollen germination" evidence=IMP

GO:0009860 "pollen tube growth" evidence=IMP

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|Q6H8M9 siat4B "ST3 beta-galactoside alpha-2,3-sialyltransferase 2" [Bos taurus (taxid:9913)]

 Score = 161 (61.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
 Identities = 40/122 (32%), Positives = 65/122 (53%)

Query:   112 NSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPY---SP 168
             N + + T+E +D LP   + + W  +       +  N    +EKL  ++P   PY    P
Sbjct:    92 NISPVWTRENMD-LPPDVQRW-WMMLQPQF---KSHNTNEVLEKLFQIVPGENPYRFRDP 146

Query:   169 RQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAK 228
             RQ  RCAV+GNSG+L  + +G ++DG++ ++R N AP   +   VG ++T   +   SAK
Sbjct:   147 RQCRRCAVVGNSGNLRGSGYGPDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAK 206

Query:   229 AL 230
              L
Sbjct:   207 NL 208

GO:0003836 "beta-galactoside (CMP) alpha-2,3-sialyltransferase activity" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|Q16842 ST3GAL2 "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransfe rase 2" [Homo sapiens (taxid:9606)]

 Score = 158 (60.7 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
 Identities = 39/122 (31%), Positives = 65/122 (53%)

Query:   112 NSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPY---SP 168
             N + + T+E +D LP   + + W  +       +  N    +EKL  ++P   PY    P
Sbjct:    92 NISPVWTRENMD-LPPDVQRW-WMMLQPQF---KSHNTNEVLEKLFQIVPGENPYRFRDP 146

Query:   169 RQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAK 228
              Q  RCAV+GNSG+L  + +G+++DG++ ++R N AP   +   VG ++T   +   SAK
Sbjct:   147 HQCRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAK 206

Query:   229 AL 230
              L
Sbjct:   207 NL 208

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0003836 "beta-galactoside (CMP) alpha-2,3-sialyltransferase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0006040 "amino sugar metabolic process" evidence=TAS

GO:0006464 "cellular protein modification process" evidence=TAS

GO:0000139 "Golgi membrane" evidence=TAS

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0016266 "O-glycan processing" evidence=TAS

GO:0018146 "keratan sulfate biosynthetic process" evidence=TAS

GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS

GO:0042339 "keratan sulfate metabolic process" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

ZFIN|ZDB-GENE-120426-1 st3gal1l2 "ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like 2" [Danio rerio (taxid:7955)]

 Score = 153 (58.9 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
 Identities = 42/124 (33%), Positives = 65/124 (52%)

Query:   139 KGVLLNRCQNK-TLCMEKLSLVLPETPPY---SPRQFGRCAVIGNSGDLLKTRFGKEIDG 194
             KG+  N+  +     +EK+  + P+   Y   SP +   CA+IGNSG+L  +R+G+ ID 
Sbjct:    83 KGLQKNKKDSDYRAVVEKMFSLFPDKTRYTNASPNRCRTCAIIGNSGNLKGSRYGRLIDA 142

Query:   195 YDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHDIM 254
             ++ VIR N  P + Y D VG K+T R +   SA   D    L  +  +VL ++  I    
Sbjct:   143 HNFVIRINMGPTKGYEDDVGSKTTHRFIYPESAVDFDNSTYLVLSPFKVLDIEWLISSFT 202

Query:   255 SKMI 258
             +K I
Sbjct:   203 TKNI 206

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0008373 "sialyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|E2RR49 ST3GAL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 156 (60.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 39/122 (31%), Positives = 64/122 (52%)

Query:   112 NSTTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPY---SP 168
             N + + T+E +D LP   + + W  +       +  N    +EKL  ++P   PY    P
Sbjct:    92 NISPVWTRENMD-LPPDVQRW-WMMLQPQF---KSHNTNEVLEKLFQIVPGENPYRFRDP 146

Query:   169 RQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAK 228
              Q  RCAV+GNSG+L  + +G ++DG++ ++R N AP   +   VG ++T   +   SAK
Sbjct:   147 HQCRRCAVVGNSGNLRGSGYGPDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAK 206

Query:   229 AL 230
              L
Sbjct:   207 NL 208

GO:0003836 "beta-galactoside (CMP) alpha-2,3-sialyltransferase activity" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

MGI|MGI:99427 St3gal2 "ST3 beta-galactoside alpha-2,3-sialyltransferase 2" [Mus musculus (taxid:10090)]

 Score = 148 (57.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 32/89 (35%), Positives = 51/89 (57%)

Query:   145 RCQNKTLCMEKLSLVLPETPPY---SPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRE 201
             +  N    +EKL  ++P   PY    P+Q  RCAV+GNSG+L  + +G+E+D ++ ++R 
Sbjct:   120 KSHNTNEVLEKLFQIVPGENPYRFRDPQQCRRCAVVGNSGNLRGSGYGQEVDSHNFIMRM 179

Query:   202 NGAPIQNYTDYVGKKSTFRLLNRGSAKAL 230
             N AP   +   VG ++T   +   SAK L
Sbjct:   180 NQAPTVGFEKDVGSRTTHHFMYPESAKNL 208

GO:0003836 "beta-galactoside (CMP) alpha-2,3-sialyltransferase activity" evidence=IDA

GO:0005576 "extracellular region" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006486 "protein glycosylation" evidence=ISO;IDA

GO:0008373 "sialyltransferase activity" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

RGD|68413 St3gal2 "ST3 beta-galactoside alpha-2,3-sialyltransferase 2" [Rattus norvegicus (taxid:10116)]

 Score = 148 (57.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 32/89 (35%), Positives = 51/89 (57%)

Query:   145 RCQNKTLCMEKLSLVLPETPPY---SPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRE 201
             +  N    +EKL  ++P   PY    P+Q  RCAV+GNSG+L  + +G+E+D ++ ++R 
Sbjct:   120 KSHNTNEVLEKLFQIVPGENPYRFRDPQQCRRCAVVGNSGNLRGSGYGQEVDSHNFIMRM 179

Query:   202 NGAPIQNYTDYVGKKSTFRLLNRGSAKAL 230
             N AP   +   VG ++T   +   SAK L
Sbjct:   180 NQAPTVGFEKDVGSRTTHHFMYPESAKNL 208

GO:0003836 "beta-galactoside (CMP) alpha-2,3-sialyltransferase activity" evidence=IEA;ISO

GO:0005576 "extracellular region" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006486 "protein glycosylation" evidence=IEA;ISO;IDA

GO:0008373 "sialyltransferase activity" evidence=IDA

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

UNIPROTKB|Q11205 St3gal2 "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransfe rase 2" [Rattus norvegicus (taxid:10116)]

 Score = 148 (57.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 32/89 (35%), Positives = 51/89 (57%)

Query:   145 RCQNKTLCMEKLSLVLPETPPY---SPRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRE 201
             +  N    +EKL  ++P   PY    P+Q  RCAV+GNSG+L  + +G+E+D ++ ++R 
Sbjct:   120 KSHNTNEVLEKLFQIVPGENPYRFRDPQQCRRCAVVGNSGNLRGSGYGQEVDSHNFIMRM 179

Query:   202 NGAPIQNYTDYVGKKSTFRLLNRGSAKAL 230
             N AP   +   VG ++T   +   SAK L
Sbjct:   180 NQAPTVGFEKDVGSRTTHHFMYPESAKNL 208

GO:0030173 "integral to Golgi membrane" evidence=IEA

ZFIN|ZDB-GENE-060321-2 st3gal1l "ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like" [Danio rerio (taxid:7955)]

 Score = 139 (54.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
 Identities = 33/92 (35%), Positives = 52/92 (56%)

Query:   148 NKTLCMEKLSLVLPETPPYS---PRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGA 204
             N T  ++ L  + P+   +S   P +   CAV+GNSG+LL++ +G+ ID +D V+R N  
Sbjct:   106 NYTYVVDILFSLFPDEDHFSDAGPDRCRTCAVVGNSGNLLRSNYGRLIDLHDFVLRINKG 165

Query:   205 PIQNYTDYVGKKSTFRLLNRGSAKALDKVVEL 236
             P + +   VG K+T R++   SA  LD    L
Sbjct:   166 PTKGFEKDVGSKTTHRIMYPESAVDLDNSTHL 197

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008373 "sialyltransferase activity" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003836 "beta-galactoside (CMP) alpha-2,3-sialyltransferase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.99	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018018001 SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (439 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	364
pfam00777	268	pfam00777, Glyco_transf_29, Glycosyltransferase fa	1e-49

>gnl|CDD|216114 pfam00777, Glyco_transf_29, Glycosyltransferase family 29 (sialyltransferase)

 Score =  167 bits (424), Expect = 1e-49
 Identities = 63/248 (25%), Positives = 85/248 (34%), Gaps = 60/248 (24%)

Query: 141 VLLNRCQNKTLCMEKLSLVLPETPPYSPRQ---FGRCAVIGNSGDLLKTRFGKEIDGYDV 197
            L  R     L  E LS +LP+  P+  +Q     RCAV+GN G L  +  GKEID +D 
Sbjct: 25  PLGLRGSE-PLISEALSSLLPKDSPFLLKQSGRCRRCAVVGNGGILKNSSLGKEIDSHDF 83

Query: 198 VIRENGAPIQNYTDYVGKKSTFRLLNRGSAKA----LDKVVEL----------------- 236
           VIR N AP + Y   VG K+T R  N  SA      LD+                     
Sbjct: 84  VIRCNLAPTKGYEKDVGSKTTLRTFNPESAPKSYQELDRNTFFVLVPFKGLDLLWLPAFL 143

Query: 237 ------------------DETRKEVLIVKTTIHDIMSKMIQEIPIKNPVYLMLGAAFGSA 278
                                 ++V I+       ++    E P        +     S 
Sbjct: 144 TKGLGTYRSFWKYVALRIPLDPQKVRILNPEFLRYVANFWLEKPE------GIHGKRPS- 196

Query: 279 AKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESR-------KGHTPLHGRAYY 331
              TGL AL  AL +CD V +YGF           Y+   +         H   +     
Sbjct: 197 ---TGLLALTLALHLCDEVHLYGFGPFDRKPIPHHYYDNVKPKAMTFGAYHDMPYEFLLL 253

Query: 332 HMMECLGV 339
             +   GV
Sbjct: 254 KRLHKQGV 261

Members of this family belong to glycosyltransferase family 29. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	364
PF00777	266	Glyco_transf_29: Glycosyltransferase family 29 (si	100.0
KOG2692	376	consensus Sialyltransferase [Carbohydrate transpor	100.0
PF06002	291	CST-I: Alpha-2,3-sialyltransferase (CST-I); InterP	93.71

>PF00777 Glyco_transf_29: Glycosyltransferase family 29 (sialyltransferase); InterPro: IPR001675 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=2.1e-48  Score=369.96  Aligned_cols=192  Identities=30%  Similarity=0.439  Sum_probs=111.2

Q ss_pred             hHHHHHhhccCCCCCCCCCCC----CcceEEecCCcCCCCCCCCCcccccceeeeccCCcccCccccccccceeeeecCc
Q 017903          150 TLCMEKLSLVLPETPPYSPRQ----FGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRG  225 (364)
Q Consensus       150 ~~~~~~L~~~lP~~~p~~~~~----~~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~apv~gfe~DVG~KTt~~~~np~  225 (364)
                      ..+.+.|.+++|..+|+....    |+|||||||||||+||+||+|||+||||||||+||++|||+|||+|||++++||+
T Consensus        33 ~~i~~~l~~l~~~~~p~~~~~~~~~~~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~aP~~gfe~DVG~kT~~~~~n~~  112 (266)
T PF00777_consen   33 FKISKELYKLLPESSPFSLKHFKRRCRTCAVVGNSGILLGSGCGKEIDSHDFVIRMNLAPVKGFEKDVGSKTTLRTMNPS  112 (266)
T ss_dssp             --HHHHHHHHTTT-S-S---TTTTG--EEEEE--BGGGTT---HHHHHTSSEEEEETT---TT-HHHH-S--SEEEEBTT
T ss_pred             hhHHHHHHHhCcccCccccccccCCCCeEEEEcCChHhccCccccccccCeeEEecCCccccccccccCccccccccChh
Confidence            456788899999988876555    9999999999999999999999999999999999999999999999999999999


Q ss_pred             chhc-ccccccccccCcEEEEEccchHH--HH---------------------HhhcccccccChHHHHhhhcc------
Q 017903          226 SAKA-LDKVVELDETRKEVLIVKTTIHD--IM---------------------SKMIQEIPIKNPVYLMLGAAF------  275 (364)
Q Consensus       226 s~~~-l~~~~~l~~~~~~~l~vk~~~~~--~~---------------------~k~~~~v~i~nP~fl~~~~~~------  275 (364)
                      ++.. + +.  .+. ......+.....+  |+                     .....++.+.||.+++....+      
T Consensus       113 ~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  188 (266)
T PF00777_consen  113 SLQRRY-NL--LDK-DTFLVLLPFKGSDLVWLPAFSSKKNTRKSFWAYKALEKKYPNQKVRILHPEFLRYIWRFWLRRGG  188 (266)
T ss_dssp             B------------T-T-EEEE--SSHHHHHHHHHHTTT-----BSSSB--S-----GGGEEEB-HHHHHHHHHHTSTT--
T ss_pred             Hhhhhc-cc--ccc-ccceeccccccchhhhhhhhhccccccccccchhhhhhccCcceeeecCHHHHhhHHHHhhhhhc
Confidence            9843 2 11  111 1111111111000  10                     112346789999998766544      


Q ss_pred             CCCCCChHHHHHHHHHhcCCeEEEeeeecCCCCCccccCCcCCCC---CCCCCc----hHHHHHHHHHcCCeEEEecC
Q 017903          276 GSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRK---GHTPLH----GRAYYHMMECLGVSLEVLSP  346 (364)
Q Consensus       276 ~~~~pSTGllav~lAL~lCDeV~lYGF~pd~~y~~w~HYy~~~~~---~~~~lH----~~~~~~~Lh~~Gv~irlh~~  346 (364)
                      ...+||||++++++||++||||+||||||..+...++|||++...   .....|    |+.++++||+.|+ |++|++
T Consensus       189 ~~~~pSTG~~~~~~Al~~CD~V~lYGF~p~~~~~~~~HYyd~~~~~~~~~~~~H~~~~E~~~~~~L~~~Gv-i~l~~g  265 (266)
T PF00777_consen  189 RGNRPSTGLMAVSLALHFCDEVHLYGFWPPDNRTVPYHYYDNVKPKPCFFYKNHDMPAEFRLLKRLHKQGV-IKLHTG  265 (266)
T ss_dssp             -SSS--HHHHHHHHHHHH-SEEEEES-S---TTS---BTTB------------S-HHHHHHHHHHHHHTTS-SEEE--
T ss_pred             cccCCCccHHHHHHHhcCCCeEEEEEEEecCCCCCccccccCccccccCCCCCCCCHHHHHHHHHHHHCCC-eEEecC
Confidence            246899999999999999999999999995566778999998542   112346    5678999999999 999986

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 29 (GT29 from CAZY) comprises enzymes with a number of known activities; sialyltransferase (2.4.99 from EC), beta-galactosamide alpha-2,6-sialyltransferase (2.4.99.1 from EC), alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (2.4.99.3 from EC), beta-galactoside alpha-2,3-sialyltransferase (2.4.99.4 from EC), N-acetyllactosaminide alpha-2,3-sialyltransferase (2.4.99.6 from EC), alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase (2.4.99.8 from EC); lactosylceramide alpha-2,3-sialyltransferase (2.4.99.9 from EC). These enzymes use a nucleotide monophosphosugar as the donor (CMP-NeuA) instead of a nucleotide diphosphosugar. Sialyltransferase may be responsible for the synthesis of the sequence NEUAC-Alpha-2,3-GAL-Beta-1,3-GALNAC-, found on sugar chains O-linked to thr or ser and also as a terminal sequenec on certain gagnliosides. These enzymes catalyse sialyltransfer reactions during glycosylation, and are type II membrane proteins.; GO: 0008373 sialyltransferase activity, 0006486 protein glycosylation, 0030173 integral to Golgi membrane; PDB: 2WNF_A 2WML_A 2WNB_A.

>KOG2692 consensus Sialyltransferase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1e-42  Score=347.51  Aligned_cols=255  Identities=29%  Similarity=0.452  Sum_probs=174.3

Q ss_pred             CCCCCCccccccccchhHHHHHHHhhhcccccchHHHhhcCCCC---ccchhhhhhhc-------------ccc----c-
Q 017903           85 DPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNG---WEEYAWRRINK-------------GVL----L-  143 (364)
Q Consensus        85 ~~~~~~~e~~~~~f~~~~~~~~w~~~~~~~~~~t~e~~~~lp~g---~~~~~w~~i~~-------------~~~----l-  143 (364)
                      ++.+..++++..++.++..+..|+...+....++.++++.++.+   |.+..+.....             ...    . 
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (376)
T KOG2692|consen   35 DSPLGLLPGLSNGLLVAAQRLPKEVVKRLSVVLRNELLQRLASGRSLWKDNSFLAREQRQLQLRCKDALKNFSRSKPSLP  114 (376)
T ss_pred             cchhhhhhccCCceeeeeeecccccccceeeehHhhhhhhccccCccccccchhHHHHHHHHHhccchhhcceecccccc
Confidence            34445666666777777777888888877778888999999998   88877743210             000    0 


Q ss_pred             -----cC---C-CchhHHHHHhhccCCCCCCCC---CCCCcceEEecCCcCCCCCCCCCcccccceeeeccCCcccCccc
Q 017903          144 -----NR---C-QNKTLCMEKLSLVLPETPPYS---PRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTD  211 (364)
Q Consensus       144 -----~~---~-~~~~~~~~~L~~~lP~~~p~~---~~~~~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~apv~gfe~  211 (364)
                           ..   . .........++..+|..+|+.   ...|++||||||||+|+||+||+|||+||+|||||+|||+|||+
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~c~~CAVVGNsG~L~~S~~G~eID~~D~ViR~N~APt~gye~  194 (376)
T KOG2692|consen  115 LGDSMLYSRSRWRRLEVIDPPLFLLLPGVSPLFPLLFKRCRRCAVVGNSGILLNSRLGREIDSHDFVIRLNLAPTKGYEK  194 (376)
T ss_pred             chhhheecccccccccccCcchhhhccccCCCcccccccCceEEEECCcceeCCCccccccccccEEEECCCCCccchhc
Confidence                 00   0 000111111466677776643   22388899999999999999999999999999999999999999


Q ss_pred             cccccceeeeecCcchhcccccccccccCcEEEEEccchHH----HH----H----------------hhcccccccChH
Q 017903          212 YVGKKSTFRLLNRGSAKALDKVVELDETRKEVLIVKTTIHD----IM----S----------------KMIQEIPIKNPV  267 (364)
Q Consensus       212 DVG~KTt~~~~np~s~~~l~~~~~l~~~~~~~l~vk~~~~~----~~----~----------------k~~~~v~i~nP~  267 (364)
                      |||+|||++++||+++................++++.+..+    +.    .                ....++.+.||.
T Consensus       195 DVGsKTt~r~~n~~Sv~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (376)
T KOG2692|consen  195 DVGSKTTLRTVNPPSVPTLLRNYLLDEPKRVTFVVWLPFKNMSLLWLPAFYNTVNLRTGYWPVPRLYPVKPDKILLLDPL  274 (376)
T ss_pred             ccccceeEEEEcchhhhhccccccccccccceEEEEcCccchhhhhhhhhccccccccceeecceeccCCcCeEeecChH
Confidence            99999999999998886543322221111144444432211    10    0                012356778888


Q ss_pred             HHHhhh-cc------CCCCCChHHHHHHHHHhcCCeEEEeeeecCCCCCc---c-ccCCcCCCCC--CCCCch----HHH
Q 017903          268 YLMLGA-AF------GSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKE---W-TRYFSESRKG--HTPLHG----RAY  330 (364)
Q Consensus       268 fl~~~~-~~------~~~~pSTGllav~lAL~lCDeV~lYGF~pd~~y~~---w-~HYy~~~~~~--~~~lH~----~~~  330 (364)
                      |+.... .+      ...+||||++++++||++|||||+|||||++....   + +||||+....  ....|+    ...
T Consensus       275 f~~~~~~~~~~s~~~~~~~pSTG~l~~~lAl~lCdeV~lyGF~~~~~~~~~~~~~~hYyd~~~~~~~~~~~H~~~~e~~~  354 (376)
T KOG2692|consen  275 FILYTVDRYLKSHGVQPKRPSTGLLAVTLALHLCDEVHLYGFGPDNRCRNSHYVPYHYYDNAKPDELFYGLHDMPLEGEA  354 (376)
T ss_pred             HHHHHHHHHhhCCCCCCCCCChhHHHHHHHHhhcCeEEEEEecCCCCCccCCCCccccccccccchhhhhhhhchhHHHH
Confidence            875432 21      13689999999999999999999999999873222   2 4888877643  556663    346


Q ss_pred             HHHHHHcCC
Q 017903          331 YHMMECLGV  339 (364)
Q Consensus       331 ~~~Lh~~Gv  339 (364)
                      +++||+.|+
T Consensus       355 ~~~l~~~g~  363 (376)
T KOG2692|consen  355 LRKLHEKGV  363 (376)
T ss_pred             HHHHHhccc
Confidence            889999996

>PF06002 CST-I: Alpha-2,3-sialyltransferase (CST-I); InterPro: IPR009251 This entry represents several alpha-2,3-sialyltransferase (2

Probab=93.71  E-value=0.29  Score=48.45  Aligned_cols=166  Identities=14%  Similarity=0.166  Sum_probs=77.8

Q ss_pred             cceEEecCCcCCCCCCCCCcccccceeeeccCCccc-CccccccccceeeeecCcchhc-cccccccc---cc-CcEEEE
Q 017903          172 GRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQ-NYTDYVGKKSTFRLLNRGSAKA-LDKVVELD---ET-RKEVLI  245 (364)
Q Consensus       172 ~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~apv~-gfe~DVG~KTt~~~~np~s~~~-l~~~~~l~---~~-~~~~l~  245 (364)
                      ++|.|.|||..|..-..|. +-.-+.|||||.-=-+ .|  -.|.+..-.++||..... ......|.   +. -+.++.
T Consensus         2 k~~~i~gngps~~~~~~~~-~~~~~~~fr~n~fy~e~~~--~lg~~~~~VFFn~~vf~~Qy~T~~~Li~n~EY~~e~i~c   78 (291)
T PF06002_consen    2 KPAIIAGNGPSLKEIDYSL-LPKDFDVFRCNQFYFEDKY--YLGKKVKAVFFNPCVFFEQYYTAKQLIQNGEYEIENIYC   78 (291)
T ss_dssp             SEEEEE-SSGGGGC--GGG-S-SSEEEEEETTGGG-SBE--TT-SEECEEEE-GGGHHHHHHHHHHHHHTTS-EECEEEE
T ss_pred             CceEEeCCCCchhhcchhh-CCCcccEEEecceecchhh--hcccceeEEEechHHHHHHHHHHHHHHhcCceeeeeeEE
Confidence            5799999999998666665 4444569999976542 22  489999999999987531 00000111   11 112322


Q ss_pred             Ecc--c-----hH-HHHHhhcccccccCh------HHHH---hhhccCCCCCChHHHHHHHHHhcC-CeEEEeeeecCCC
Q 017903          246 VKT--T-----IH-DIMSKMIQEIPIKNP------VYLM---LGAAFGSAAKGTGLKALEFALSIC-DSVDMYGFTVDPG  307 (364)
Q Consensus       246 vk~--~-----~~-~~~~k~~~~v~i~nP------~fl~---~~~~~~~~~pSTGllav~lAL~lC-DeV~lYGF~pd~~  307 (364)
                      ..-  .     .. ..+.+....+...|-      .|..   ....+-.++.|||.+|+..|+.+- .+|-+.|.- +  
T Consensus        79 s~~~~~~~e~~~f~~~~~~~yp~~~~~y~~l~~l~~f~~~~ky~~~y~~q~~TSGVyM~~vAIAlGYKEIYLaGID-F--  155 (291)
T PF06002_consen   79 STINFEDFENKYFDDYFDKHYPDARLTYSYLKKLKPFYAHIKYNEIYYNQRITSGVYMCAVAIALGYKEIYLAGID-F--  155 (291)
T ss_dssp             ---S-TTTS-HHHHHHHHHHSTT-EETHHHHTTSHHHHHHHHHHHHHH-----HHHHHHHHHHHCT--EEEEES---T--
T ss_pred             eccccccccchhhhhHHHHhCCCchhHHHHHHhcHHHHHHHHHHHhhcCCCcchHHHHHHHHHHcCcceEEEeeee-e--
Confidence            110  0     11 112232233333222      1221   111122467899999999999885 458888883 1  


Q ss_pred             C-CccccCCcCCCC--------------CCCCCchHH----HHHHHHHcCCeEEEe
Q 017903          308 Y-KEWTRYFSESRK--------------GHTPLHGRA----YYHMMECLGVSLEVL  344 (364)
Q Consensus       308 y-~~w~HYy~~~~~--------------~~~~lH~~~----~~~~Lh~~Gv~irlh  344 (364)
                      | ..+.||+.+..+              .+...|.++    -.+.+.+.+- ++|.
T Consensus       156 Y~~~~~hy~fe~k~~ni~~l~~~~~~~~~~~~~Hsk~~Dlqal~~lqk~y~-v~iY  210 (291)
T PF06002_consen  156 YQNGGGHYAFENKSENIINLLPDFENRKSSDIQHSKDYDLQALEFLQKYYD-VKIY  210 (291)
T ss_dssp             T-TTSSSSSS-SSTHHHHHHSGGGGSS--STTT--HHHHHHHHHHHHHHHT--EEE
T ss_pred             ecCCCCcccccccccchhhhCcccccccccccccchhhCHHHHHHHHHhcC-eeEE
Confidence            3 456788443321              234677433    3556777632 3444

4.99 from EC) proteins, most of which are found in the food-borne pathogen Campylobacter jejuni. Sialyltransferases transfer a sialic acid moiety from cytidine-5'-monophospho-N-acetyl-neuraminic acid (CMP-NeuAc) to terminal positions of various key glycoconjugates, which play critical roles in cell recognition and adherence []. The structure of Cst-II alpha-2,3-sialyltransferase from C. jejuni consists of a 3-layer alpha/beta/alpha topology. Cst-II catalytic mechanism involves an essential histidine (general base) and two tyrosine residues (coordination of the phosphate leaving group) to carry out substrate binding and glycosyl transfer. ; PDB: 2X63_A 2X61_B 1RO7_B 2WQQ_A 2X62_B 1RO8_A 2DRJ_A 2P56_A 2P2V_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	364
2wml_A	298	Crystal Structure Of A Mammalian Sialyltransferase		6e-14
2wnb_A	298	Crystal Structure Of A Mammalian Sialyltransferase		6e-14

>pdb|2WML|A Chain A, Crystal Structure Of A Mammalian Sialyltransferase Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 173 RCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDK 232
           RCAV+GNSG+L ++ +G +ID +D V+R N AP + +   VG K+T   +   S + L +
Sbjct: 99  RCAVVGNSGNLKESYYGPQIDSHDFVLRXNKAPTEGFEADVGSKTTHHFVYPESFRELAQ 158
Query: 233 -----VVELDETRKEVLIVKTTIHDIMSKMI---QEIPIKNPVYLMLGAAF--------- 275
                +V    T  E +I  TT   I    +    +I +K    L+   AF         
Sbjct: 159 EVSXILVPFKTTDLEWVISATTTGRISHTYVPVPAKIKVKKEKILIYHPAFIKYVFDRWL 218
Query: 276 --GSAAKGTGLKALEFALSICDSVDMYGFTVD 305
                   TG+ ++ F+L ICD VD+YGF  D
Sbjct: 219 QGHGRYPSTGILSVIFSLHICDEVDLYGFGAD 250

>pdb|2WNB|A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 173 RCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDK 232
           RCAV+GNSG+L ++ +G +ID +D V+R N AP + +   VG K+T   +   S + L +
Sbjct: 99  RCAVVGNSGNLKESYYGPQIDSHDFVLRXNKAPTEGFEADVGSKTTHHFVYPESFRELAQ 158
Query: 233 -----VVELDETRKEVLIVKTTIHDIMSKMI---QEIPIKNPVYLMLGAAF--------- 275
                +V    T  E +I  TT   I    +    +I +K    L+   AF         
Sbjct: 159 EVSXILVPFKTTDLEWVISATTTGRISHTYVPVPAKIKVKKEKILIYHPAFIKYVFDRWL 218
Query: 276 --GSAAKGTGLKALEFALSICDSVDMYGFTVD 305
                   TG+ ++ F+L ICD VD+YGF  D
Sbjct: 219 QGHGRYPSTGILSVIFSLHICDEVDLYGFGAD 250

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	364
2wnf_A	298	CMP-N-acetylneuraminate-beta-galactosamide-alpha-	2e-28
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>2wnf_A CMP-N-acetylneuraminate-beta-galactosamide-alpha- 2,3-sialyltransferase; glycosyltransferase, disulfide bond, golgi apparatus, glycoprotein; HET: CG3 A2G GAL; 1.25A {Sus scrofa} PDB: 2wnb_A* 2wml_A Length = 298

 Score =  111 bits (278), Expect = 2e-28
 Identities = 59/256 (23%), Positives = 99/256 (38%), Gaps = 35/256 (13%)

Query: 114 TTILTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYS---PRQ 170
             +LT +      + ++   W R+ +    N   +     E   +V     P        
Sbjct: 41  QPLLTAKNAHLEEDTYKW--WLRLQREKQPNNLNDTI--RELFQVVPGNVDPLLEKRLVS 96

Query: 171 FGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKAL 230
             RCAV+GNSG+L ++ +G +ID +D V+R N AP + +   VG K+T   +   S + L
Sbjct: 97  CRRCAVVGNSGNLKESYYGPQIDSHDFVLRMNKAPTEGFEADVGSKTTHHFVYPESFREL 156

Query: 231 DK-----VVELDETRKEVLIVKTTIHDIMSKMIQ----------EIPIKNPVYLMLGAAF 275
            +     +V    T  E +I  TT   I    +           +I I +P ++      
Sbjct: 157 AQEVSMILVPFKTTDLEWVISATTTGRISHTYVPVPAKIKVKKEKILIYHPAFIKYVFDR 216

Query: 276 GSAAKG----TGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRK--------GHT 323
                G    TG+ ++ F+L ICD VD+YGF  D     W  Y+  +           H 
Sbjct: 217 WLQGHGRYPSTGILSVIFSLHICDEVDLYGFGAD-SKGNWHHYWENNPSAGAFRKTGVHD 275

Query: 324 PLHGRAYYHMMECLGV 339
                    ++  +  
Sbjct: 276 GDFESNVTTILASINK 291

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 62/363 (17%), Positives = 101/363 (27%), Gaps = 134/363 (36%)

Query: 21  IYITGVSNLY--------YN--RISDEDYEALESLQNAFRKCVSANGLGLEAVSG----- 65
           +YI     LY        YN  R+     +    L+ A  +   A  + ++ V G     
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRL-----QPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 66  --EDYCQ---VKINFPKD----TVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTI 116
              D C    V+           +     P T  LE L     L   +      R+  + 
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPET-VLEMLQ---KLLYQIDPNWTSRSDHSS 221

Query: 117 LTKEYIDALPNGWEEYAWRRINKGVLLNRCQNKTLCMEKLSLVLPETPPYSPR---QFG- 172
             K  I        +   RR+ K      C         L LVL      + +    F  
Sbjct: 222 NIKLRIH-----SIQAELRRLLKSKPYENC---------L-LVLLNV--QNAKAWNAFNL 264

Query: 173 RCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKALDK 232
            C +      LL TRF                  +  TD++   +T  +    S      
Sbjct: 265 SCKI------LLTTRF------------------KQVTDFLSAATTTHI----SLDHHSM 296

Query: 233 VVELDETRKEVLIVKTTIHDIMSKMIQEIPIK----NPVYL-MLGAAFGSAAKGTGLKAL 287
            +  DE  K +L+        +    Q++P +    NP  L ++                
Sbjct: 297 TLTPDEV-KSLLL------KYLDCRPQDLPREVLTTNPRRLSIIAE-------------- 335

Query: 288 EFALSICDSVDMYGFTVDPGYKEWTRYFSESRKGHTPLHGRAYYHMMECLGVSLEVLSPS 347
               SI D +  +          W     +               +   +  SL VL P+
Sbjct: 336 ----SIRDGLATW--------DNWKHVNCDK--------------LTTIIESSLNVLEPA 369

Query: 348 ELQ 350
           E +
Sbjct: 370 EYR 372

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	364
2wnf_A	298	CMP-N-acetylneuraminate-beta-galactosamide-alpha-	100.0
1ro7_A	259	Alpha-2,3/8-sialyltransferase; mixed alpha/beta, r	99.78
2p2v_A	288	Alpha-2,3-sialyltransferase; mixed alpha-beta; HET	99.76
2wqq_A	291	Alpha-2,3-/2,8-sialyltransferase; GTA, cstii, glyc	99.68

>2wnf_A CMP-N-acetylneuraminate-beta-galactosamide-alpha- 2,3-sialyltransferase; glycosyltransferase, disulfide bond, golgi apparatus, glycoprotein; HET: CG3 A2G GAL; 1.25A {Sus scrofa} PDB: 2wnb_A* 2wml_A

Probab=100.00  E-value=4.4e-51  Score=394.94  Aligned_cols=245  Identities=24%  Similarity=0.398  Sum_probs=176.0

Q ss_pred             CCCcccccccCCCCCCCCccCCCCCCccccccccchhHHHHHHHhhhcccccchHHHhhcCCCCccchhhhhhhcccccc
Q 017903           65 GEDYCQVKINFPKDTVPKWRDPNTGELESLSFDFNLCEAVAAWERVRNSTTILTKEYIDALPNGWEEYAWRRINKGVLLN  144 (364)
Q Consensus        65 ~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~~~~~~~~w~~~~~~~~~~t~e~~~~lp~g~~~~~w~~i~~~~~l~  144 (364)
                      ..-.|+..+.-+  +.|.|++..|...                     ...++|++... +++. .-.+|.+++...   
T Consensus        15 ~~~~c~~~~~~~--~~s~~f~~~f~~~---------------------~~~~lt~~~~~-~~~~-~~~~w~~l~~~~---   66 (298)
T 2wnf_A           15 RPCTCTRCIEEQ--RVSAWFDERFNRS---------------------MQPLLTAKNAH-LEED-TYKWWLRLQREK---   66 (298)
T ss_dssp             -CCSSSSCTTCS--SSCHHHHHHCCTT---------------------CCCBCCTTTCC-CCHH-HHHHHHHHHCCS---
T ss_pred             CCCCCCcccccc--ccCHHHHhHhCCC---------------------CCceeccCcCC-CCHH-HHHHHHhccccc---
Confidence            455788878764  4578877777643                     22355554422 1110 123577776532   


Q ss_pred             CCCchhHHHHHhhccCCCCCC-CCC---CCCcceEEecCCcCCCCCCCCCcccccceeeeccCCcccCccccccccceee
Q 017903          145 RCQNKTLCMEKLSLVLPETPP-YSP---RQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFR  220 (364)
Q Consensus       145 ~~~~~~~~~~~L~~~lP~~~p-~~~---~~~~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~apv~gfe~DVG~KTt~~  220 (364)
                      ...+...+.++|++++|+.+| +..   .+|++||||||||||+||+||+|||+||||||||+||++|||+|||+|||++
T Consensus        67 ~~~~~~~v~~~l~~~lP~~~~~~~~~~~~~~~~CAVVGNsGiL~~S~~G~eIDs~D~ViR~N~aP~~gye~DVG~KTt~~  146 (298)
T 2wnf_A           67 QPNNLNDTIRELFQVVPGNVDPLLEKRLVSCRRCAVVGNSGNLKESYYGPQIDSHDFVLRMNKAPTEGFEADVGSKTTHH  146 (298)
T ss_dssp             SCCCHHHHHHHHTTTSCSCCCTTTTGGGCSCCEEEEECCBGGGTTCCCHHHHHTSSEEEEETTCCCTTCHHHHCSCCSEE
T ss_pred             ccccHHHHHHHHHHhCCCccccccccccCCCCeEEEECCccccCCCCccccccchhheeccCcCCcCcccccCccCceeE
Confidence            234566788999999999887 765   7999999999999999999999999999999999999999999999999999


Q ss_pred             eecCcchhcccccccccccCcEEEEEccc--hHHHHH--------------------hhcccccccChHHHHhhhccC--
Q 017903          221 LLNRGSAKALDKVVELDETRKEVLIVKTT--IHDIMS--------------------KMIQEIPIKNPVYLMLGAAFG--  276 (364)
Q Consensus       221 ~~np~s~~~l~~~~~l~~~~~~~l~vk~~--~~~~~~--------------------k~~~~v~i~nP~fl~~~~~~~--  276 (364)
                      ++||+++..+.+.       ..+++++..  ...|+.                    ...+++.+.||.|+.....++  
T Consensus       147 ~~n~~s~~~~~~~-------~~~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~P~~~~~~~~~w~~  219 (298)
T 2wnf_A          147 FVYPESFRELAQE-------VSMILVPFKTTDLEWVISATTTGRISHTYVPVPAKIKVKKEKILIYHPAFIKYVFDRWLQ  219 (298)
T ss_dssp             EEBTTBCCCCCTT-------CEEEECCSSHHHHHHHHHHTTTCCCCBSSSBCCSCCCCCGGGEEEBCHHHHHHHHHHTST
T ss_pred             EeccccccccCCC-------ceEEEeecCccchhhhhHhhcCCcccchhhhhhHHhhccCCeEEEeCHHHHHHHHHHHHH
Confidence            9999987543211       011211111  111111                    012467789999987654332  


Q ss_pred             --CCCCChHHHHHHHHHhcCCeEEEeeeecCCCCCccccCCcCCCCC----CCCCc----hHHHHHHHHHcCCeEEEecC
Q 017903          277 --SAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEWTRYFSESRKG----HTPLH----GRAYYHMMECLGVSLEVLSP  346 (364)
Q Consensus       277 --~~~pSTGllav~lAL~lCDeV~lYGF~pd~~y~~w~HYy~~~~~~----~~~lH----~~~~~~~Lh~~Gv~irlh~~  346 (364)
                        ..+||||++++++||++||||+||||++|. +..|+|||++....    ..+.|    |+.+++.||+.|+ |++|++
T Consensus       220 ~~~~~pSTG~~~v~lAl~~CDeV~lYGF~~d~-~~~~~HYyd~~~~~~~~~~~~~H~~~~E~~~~~~Lh~~G~-i~l~~g  297 (298)
T 2wnf_A          220 GHGRYPSTGILSVIFSLHICDEVDLYGFGADS-KGNWHHYWENNPSAGAFRKTGVHDGDFESNVTTILASINK-IRIFKG  297 (298)
T ss_dssp             TCSSSCCHHHHHHHHHHHHCSEEEEESCSCCT-TSCCCBTTC-----------CCSCHHHHHHHHHHHHHTTS-SEEECC
T ss_pred             hCCCCCchhHHHHHHHHHhCCEEEEeeeccCC-CCCceecccCccccccccCCCCCCcHHHHHHHHHHHHCCC-EEEEeC
Confidence              358999999999999999999999999875 56689999988542    34677    4668999999999 999986

>1ro7_A Alpha-2,3/8-sialyltransferase; mixed alpha/beta, rossmann fold; HET: CSF; 1.80A {Campylobacter jejuni} SCOP: c.130.1.1 PDB: 1ro8_A* 2drj_A* 2x62_A* 2x61_A* 2x63_A*

Probab=99.78  E-value=3.1e-19  Score=169.40  Aligned_cols=166  Identities=11%  Similarity=0.137  Sum_probs=105.0

Q ss_pred             cceEEecCCcCCCCCCCCCcccccceeeeccCCcccC-ccccccccceeeeecCcchhc-cccccccccc---CcEEEEE
Q 017903          172 GRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQN-YTDYVGKKSTFRLLNRGSAKA-LDKVVELDET---RKEVLIV  246 (364)
Q Consensus       172 ~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~apv~g-fe~DVG~KTt~~~~np~s~~~-l~~~~~l~~~---~~~~l~v  246 (364)
                      ++|+||||||+|+...++. |++.+.|||+|.++.+. |  |||+||++.++||+.+.. ......+...   ..+.++.
T Consensus         2 k~c~ivGNGpsL~~id~~~-l~~~~~v~r~N~~~~~d~y--~VG~kt~~v~~NPsv~~~~~~~l~~~~~~~~~~~~~i~~   78 (259)
T 1ro7_A            2 KKVIIAGNGPSLKEIDYSR-LPNDFDVFRCNQFYFEDKY--YLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETELIMC   78 (259)
T ss_dssp             CEEEEECCSGGGGCCCTTS-CCSSEEEEEETTGGGCSEE--TTCSEEEEEEECGGGHHHHHHHHHHHHHTTSCEEEEEEE
T ss_pred             ceEEEEeCcHHHhhhhhhh-hccCCeEEEEeChhhcCcc--ccccccceEEECcHHHHHHHHHHHHHHhhcccccceEee
Confidence            6899999999999888885 88777799999997754 5  599999999999998632 1111111111   1122322


Q ss_pred             cc--c--h-----HHHHHhhcccccccChHHHHhhh---------c-cCCCCCChHHHHHHHHHhc-CCeEEEeee----
Q 017903          247 KT--T--I-----HDIMSKMIQEIPIKNPVYLMLGA---------A-FGSAAKGTGLKALEFALSI-CDSVDMYGF----  302 (364)
Q Consensus       247 k~--~--~-----~~~~~k~~~~v~i~nP~fl~~~~---------~-~~~~~pSTGllav~lAL~l-CDeV~lYGF----  302 (364)
                      ..  .  .     .+.+.+....+ ..++.++....         . ....+||||++|+.+|+.+ ||||++|||    
T Consensus        79 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~l~~f~~~~~~~~~~~~~r~stGl~~~~lA~~lGckeIyLyG~D~~~  157 (259)
T 1ro7_A           79 SNYNQAHLENENFVKTFYDYFPDA-HLGYDFFKQLKDFNAYFKFHEIYFNQRITSGVYMCAVAIALGYKEIYLSGIDFYQ  157 (259)
T ss_dssp             CCCSCTTTSCHHHHHTHHHHSTTC-EETHHHHTTSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHTCCEEEEESCCTTT
T ss_pred             ecccccccchHHHHHHHHHhcCcc-ccCchhhhHHHHHHHhhhhcccccccCcCHHHHHHHHHHHCCCCEEEEEeEcCCC
Confidence            11  0  0     11122222233 33444443211         1 1256899999999999999 999999999    


Q ss_pred             ----ecCCCCC-----ccccCCcCCCCCCCCCchH----HHHHHHHHcCCeEEEe
Q 017903          303 ----TVDPGYK-----EWTRYFSESRKGHTPLHGR----AYYHMMECLGVSLEVL  344 (364)
Q Consensus       303 ----~pd~~y~-----~w~HYy~~~~~~~~~lH~~----~~~~~Lh~~Gv~irlh  344 (364)
                          +++....     ..+|||++...  .++|.+    ..++.||+.|- ++|.
T Consensus       158 ~~~~~~Y~~~~~~~~~i~~hy~d~~~~--~~~H~m~~Ef~al~~Lh~~g~-v~I~  209 (259)
T 1ro7_A          158 NGSSYAFDTKQKNLLKLAPNFKNDNSH--YIGHSKNTDIKALEFLEKTYK-IKLY  209 (259)
T ss_dssp             TSSCCSSCCCCHHHHHHCGGGGSSCCC--CTTCCHHHHHHHHHHHHHHHT-CEEE
T ss_pred             CCCCcCCCCCcccccccCcccccccCC--ccccCchHHHHHHHHHHHhCC-eEEE
Confidence                7654322     22588877653  345532    33688999983 4443

>2p2v_A Alpha-2,3-sialyltransferase; mixed alpha-beta; HET: CSF; 1.85A {Campylobacter jejuni} PDB: 2p56_A

Probab=99.76  E-value=2.6e-18  Score=165.64  Aligned_cols=174  Identities=14%  Similarity=0.162  Sum_probs=106.9

Q ss_pred             CCCCcceEEecCCcCCCCCCCCCcccccceeeeccCCccc-CccccccccceeeeecCcchhc-cccccccccc---CcE
Q 017903          168 PRQFGRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQ-NYTDYVGKKSTFRLLNRGSAKA-LDKVVELDET---RKE  242 (364)
Q Consensus       168 ~~~~~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~apv~-gfe~DVG~KTt~~~~np~s~~~-l~~~~~l~~~---~~~  242 (364)
                      ....++|+||||||+|+++. |.+||+.|+|||+|.++.. .|  ++|++|.+.+++|+.+.. .+....+...   ..+
T Consensus        16 ~~~~~~c~IvGNGPSL~~~~-~~~i~~~~~v~rvN~~~~~~~~--~~g~~~~yv~~dp~~~~~~~~~l~~l~~~~~y~~~   92 (288)
T 2p2v_A           16 SKNMQNIIIAGNGPSLKNIN-YKRLPREYDVFRCNQFYFEDKY--YLGKKIKAVFFNPGVFLQQYHTAKQLILKNEYEIK   92 (288)
T ss_dssp             CTTCCEEEEECCSGGGGGCC-GGGSCSSCEEEEETTGGGCSBC--TTCSEESEEEECGGGHHHHHHHHHHHHHTTSCEEC
T ss_pred             cCCCCeEEEEecChhhcCCC-chhhccCCEEEEEcChHhcCcc--cccccceEEEECcHHHHHHHHHHHhhhhccccccc
Confidence            44579999999999999998 9999999999999999996 46  499999999999987642 1111111000   011


Q ss_pred             EEEEccc---------hHHHHHhhcccccccChHHHHh----------hhccCCCCCChHHHHHHHHHhc-CCeEEEeee
Q 017903          243 VLIVKTT---------IHDIMSKMIQEIPIKNPVYLML----------GAAFGSAAKGTGLKALEFALSI-CDSVDMYGF  302 (364)
Q Consensus       243 ~l~vk~~---------~~~~~~k~~~~v~i~nP~fl~~----------~~~~~~~~pSTGllav~lAL~l-CDeV~lYGF  302 (364)
                      .+.....         ..+.+.+....+.+.. .++..          ...+...++|||++|+.+|+.+ ||||++|||
T Consensus        93 ~i~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~l~~l~~fw~~~~~~~~~~~~r~StGl~~l~iA~~lGckeIyLyGf  171 (288)
T 2p2v_A           93 NIFCSTFNLPFIESNDFLHQFYNFFPDAKLGY-EVIENLKEFYAYIKYNEIYFNKRITSGVYMCAIAIALGYKTIYLCGI  171 (288)
T ss_dssp             CEEECCCCCTTTSCHHHHHHHHHHCTTCEETH-HHHTTSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHTCCEEEEESC
T ss_pred             EEEeeecccccchHHHHHHHHHHhCCCceEee-hhhhHHHHHhhhhhhcccccccCcchHHHHHHHHHHcCCCEEEEeee
Confidence            1211110         0111222221221111 22211          1112356899999999999999 999999999


Q ss_pred             ecCCCCCccccCCcCCCC------------CCCCCchHH----HHHHHHHc-CCeEEEecCC
Q 017903          303 TVDPGYKEWTRYFSESRK------------GHTPLHGRA----YYHMMECL-GVSLEVLSPS  347 (364)
Q Consensus       303 ~pd~~y~~w~HYy~~~~~------------~~~~lH~~~----~~~~Lh~~-Gv~irlh~~~  347 (364)
                        |.+.....|+|++...            .....|.++    -++.||+. ||+|-=-+|.
T Consensus       172 --D~~~~~~~yhYd~~~~~~~~~~~~~~~~k~~~~H~m~~e~~al~~Lh~~g~v~iynls~~  231 (288)
T 2p2v_A          172 --DFYEGDVIYPFEAMSTNIKTIFPGIKDFKPSNCHSKEYDIEALKLLKSIYKVNIYALCDD  231 (288)
T ss_dssp             --CTTCSSCCCSSCSSCHHHHHHSCC--CCCCCTTCCHHHHHHHHHHHHHHHTCEEEECCTT
T ss_pred             --cCCCCCCcccccCccccccccccccccccCCcccCCHHHHHHHHHHHHhcCceEEEcCCC
Confidence              3322233333554321            134567543    36889999 5654444443

>2wqq_A Alpha-2,3-/2,8-sialyltransferase; GTA, cstii, glycosyltransfer; HET: CSF; 2.25A {Campylobacter jejuni}

Probab=99.68  E-value=6.8e-17  Score=155.79  Aligned_cols=166  Identities=11%  Similarity=0.080  Sum_probs=101.3

Q ss_pred             cceEEecCCcCCCCCCCCCcccccceeeeccCCccc-CccccccccceeeeecCcchhc-cccccccc-c-c-CcEEEEE
Q 017903          172 GRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQ-NYTDYVGKKSTFRLLNRGSAKA-LDKVVELD-E-T-RKEVLIV  246 (364)
Q Consensus       172 ~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~apv~-gfe~DVG~KTt~~~~np~s~~~-l~~~~~l~-~-~-~~~~l~v  246 (364)
                      ++|+||||||+|.++. +.+||++|+|||+|.++.. .|  ++|++|.+.+++|+.... ......+. . . ..+.++.
T Consensus         2 ~~c~IvGNGpSL~~~~-~~~i~~~~~vi~vN~~~~~~~~--~~g~~~~yv~~dp~~~~~~~~~l~~~~~~~~~~~~~i~~   78 (291)
T 2wqq_A            2 KKVIIAGNGPSLKEID-YSRLPNDFDVFRCNQFYFEDKY--YLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETELIMC   78 (291)
T ss_dssp             CEEEEECCSGGGGCCC-GGGCCSSEEEEEETTGGGCSEE--TTCSEEEEEEECGGGHHHHHHHHHHHHHTTSCEEEEEEE
T ss_pred             CcEEEEeCchhhccCc-hhhhccCCeEEEEcCccccccc--ccccCccEEEEchHHHHHHHHHHHHHHhccccccceeee
Confidence            6899999999999997 9999999999999999996 46  499999999999986642 21110011 1 1 1122222


Q ss_pred             ccc-h-----HHH---HHhhcccccccChHHHHhhhc----------cCCCCCChHHHHHHHHHhc-CCeEEEeee----
Q 017903          247 KTT-I-----HDI---MSKMIQEIPIKNPVYLMLGAA----------FGSAAKGTGLKALEFALSI-CDSVDMYGF----  302 (364)
Q Consensus       247 k~~-~-----~~~---~~k~~~~v~i~nP~fl~~~~~----------~~~~~pSTGllav~lAL~l-CDeV~lYGF----  302 (364)
                      ... .     ...   +......+ ...+.++.....          ....+||||++|+.+|+.+ |+||++|||    
T Consensus        79 ~~~~~~~~~~~~~~~~l~~~~~~v-~~~~~~l~~l~~~~~~~~~~~~~~~~r~stGl~~lslA~~lGckeIyLyGfD~~~  157 (291)
T 2wqq_A           79 SNYNQAHLENENFVKTFYDYFPDA-HLGYDFFKQLKDFNAYFKFHEIQFNQRITSGVYMCAVAIALGYKEIYLSGIDFYQ  157 (291)
T ss_dssp             CCCSCTTTSCHHHHHTHHHHSTTC-EETHHHHTTCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTCCEEEEESCCCC-
T ss_pred             eeccchhhHHHHHHHHHHhhcCce-eccHhhhhhHHHHhhhhhccccccccCccHHHHHHHHHHHcCCCEEEEEeecCCC
Confidence            111 0     011   11111222 223333322111          1246899999999999999 999999999    


Q ss_pred             ----ecCCCCC-----ccccCCcCCCCCCCCCch----HHHHHHHHHcCCeEEEe
Q 017903          303 ----TVDPGYK-----EWTRYFSESRKGHTPLHG----RAYYHMMECLGVSLEVL  344 (364)
Q Consensus       303 ----~pd~~y~-----~w~HYy~~~~~~~~~lH~----~~~~~~Lh~~Gv~irlh  344 (364)
                          +++....     ..+|||++...  .+.|.    ...++.||+.|- +++.
T Consensus       158 ~~~~~~y~~~~~~~~~i~~hy~d~~~~--~~~H~mp~ef~al~~Lh~~g~-v~vy  209 (291)
T 2wqq_A          158 NGSSYAFDTKQKNLLKLAPNFKNDNSH--YIGHSKNTDIKALEFLEKTYK-IKLY  209 (291)
T ss_dssp             ----CCSCCCCHHHHHHCGGGC---------CCCHHHHHHHHHHHHHHHT-CEEE
T ss_pred             CCCCCcCcCCccccccCCCccccccCC--CCCcCCHHHHHHHHHHHHhcC-eeEE
Confidence                5443211     12577776632  23452    334789999993 4544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	364
d1ro7a_	258	Alpha-2,3/8-sialyltransferase CstII {Campylobacter	97.83

>d1ro7a_ c.130.1.1 (A:) Alpha-2,3/8-sialyltransferase CstII {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: Alpha-2,3/8-sialyltransferase CstII
superfamily: Alpha-2,3/8-sialyltransferase CstII
family: Alpha-2,3/8-sialyltransferase CstII
domain: Alpha-2,3/8-sialyltransferase CstII
species: Campylobacter jejuni [TaxId: 197]

Probab=97.83  E-value=3e-05  Score=70.90  Aligned_cols=144  Identities=13%  Similarity=0.202  Sum_probs=83.2

Q ss_pred             cceEEecCCcCCCCCCCCCcccccceeeeccCCcccCccccccccceeeeecCcchhc----ccccccccccCcEEEEEc
Q 017903          172 GRCAVIGNSGDLLKTRFGKEIDGYDVVIRENGAPIQNYTDYVGKKSTFRLLNRGSAKA----LDKVVELDETRKEVLIVK  247 (364)
Q Consensus       172 ~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~apv~gfe~DVG~KTt~~~~np~s~~~----l~~~~~l~~~~~~~l~vk  247 (364)
                      +||.|+|||..|++..++..++..| |||||.+-... +.++|.++.+.++.+.....    ..+.........+.+..+
T Consensus         2 Kr~~IlGNGPSLk~iDl~~l~kd~~-vfgcN~fY~~d-~~~~~~~~d~v~~d~~v~~~~y~~~~~i~~~~~~~~~~~~~~   79 (258)
T d1ro7a_           2 KKVIIAGNGPSLKEIDYSRLPNDFD-VFRCNQFYFED-KYYLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETELIMCS   79 (258)
T ss_dssp             CEEEEECCSGGGGCCCTTSCCSSEE-EEEETTGGGCS-EETTCSEEEEEEECGGGHHHHHHHHHHHHHTTSCEEEEEEEC
T ss_pred             ceEEEEecChhcccCCHhHccCCCe-EEEEcchhhcc-hhhcCCcceEEEcccceeeccccceeeeeccchhhhhhhhcc
Confidence            6899999999999999999888776 99999887643 45689999999988876421    111110011111111111


Q ss_pred             c---c-h--HHH---HHhhcccc------cccChHHHHh---hhccCCCCCChHHHHHHHHHh-cCCeEEEeeeecCCCC
Q 017903          248 T---T-I--HDI---MSKMIQEI------PIKNPVYLML---GAAFGSAAKGTGLKALEFALS-ICDSVDMYGFTVDPGY  308 (364)
Q Consensus       248 ~---~-~--~~~---~~k~~~~v------~i~nP~fl~~---~~~~~~~~pSTGllav~lAL~-lCDeV~lYGF~pd~~y  308 (364)
                      .   . .  ...   ..+.....      .-..+.+-..   ....-..++|||..|+.+|+. =+++|-+.|+--..  
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~g~~alqiA~~LGfKeIYLlG~D~y~--  157 (258)
T d1ro7a_          80 NYNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYFKFHEIYFNQRITSGVYMCAVAIALGYKEIYLSGIDFYQ--  157 (258)
T ss_dssp             CCSCTTTSCHHHHHTHHHHSTTCEETHHHHTTSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHTCCEEEEESCCTTT--
T ss_pred             cccccchhhhhhhhhhhccccccccceEcccccCCcccceeeccccccCCCCHHHHHHHHHHHcCCCEEEEEeeccCC--
Confidence            1   0 0  000   00100000      0011111111   001113478999999999997 47999999994221  


Q ss_pred             CccccCCcCCC
Q 017903          309 KEWTRYFSESR  319 (364)
Q Consensus       309 ~~w~HYy~~~~  319 (364)
                      ....|+|+...
T Consensus       158 ~~~~~~ye~~~  168 (258)
T d1ro7a_         158 NGSSYAFDTKQ  168 (258)
T ss_dssp             TSSCCSSCCCC
T ss_pred             CCCCccccCcc
Confidence            23458888764